Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204380 | XP_013457459.1 | 94.118 | 408 | 22 | 1 | 1 | 408 | 1 | 406 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204380 | sp|Q10058|YAM3_SCHPO | 31.910 | 398 | 218 | 14 | 34 | 399 | 1 | 377 | 1.97e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000310 | Msa1204380 | 0.962066 | 1.947106e-120 | -8.615850e-47 |
| Msa0014970 | Msa1204380 | 0.817862 | 2.645453e-52 | -8.615850e-47 |
| Msa0025690 | Msa1204380 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0046860 | Msa1204380 | 0.804723 | 1.883954e-49 | -8.615850e-47 |
| Msa0049670 | Msa1204380 | 0.818610 | 1.791341e-52 | -8.615850e-47 |
| Msa0064440 | Msa1204380 | 0.804053 | 2.597655e-49 | -8.615850e-47 |
| Msa0090350 | Msa1204380 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
| Msa0619480 | Msa1204380 | 0.806660 | 7.383992e-50 | -8.615850e-47 |
| Msa0623360 | Msa1204380 | 0.835802 | 1.356904e-56 | -8.615850e-47 |
| Msa0625550 | Msa1204380 | 0.817705 | 2.870960e-52 | -8.615850e-47 |
| Msa0635070 | Msa1204380 | 0.833058 | 6.632849e-56 | -8.615850e-47 |
| Msa0639640 | Msa1204380 | 0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0659640 | Msa1204380 | 0.800142 | 1.655811e-48 | -8.615850e-47 |
| Msa0664110 | Msa1204380 | 0.817767 | 2.780371e-52 | -8.615850e-47 |
| Msa0664130 | Msa1204380 | 0.813384 | 2.630819e-51 | -8.615850e-47 |
| Msa0681880 | Msa1204380 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0687320 | Msa1204380 | 0.801590 | 8.379909e-49 | -8.615850e-47 |
| Msa0701780 | Msa1204380 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
| Msa0707870 | Msa1204380 | 0.813392 | 2.619346e-51 | -8.615850e-47 |
| Msa0713590 | Msa1204380 | 0.806490 | 8.020008e-50 | -8.615850e-47 |
| Msa0747660 | Msa1204380 | 0.850251 | 1.916317e-60 | -8.615850e-47 |
| Msa0749130 | Msa1204380 | 0.802593 | 5.211227e-49 | -8.615850e-47 |
| Msa0755530 | Msa1204380 | 0.807741 | 4.357819e-50 | -8.615850e-47 |
| Msa0785670 | Msa1204380 | 0.837269 | 5.743971e-57 | -8.615850e-47 |
| Msa0797210 | Msa1204380 | 0.809428 | 1.901638e-50 | -8.615850e-47 |
| Msa0797240 | Msa1204380 | 0.801474 | 8.851259e-49 | -8.615850e-47 |
| Msa0829740 | Msa1204380 | 0.805911 | 1.062261e-49 | -8.615850e-47 |
| Msa0835070 | Msa1204380 | 0.806431 | 8.255244e-50 | -8.615850e-47 |
| Msa0138380 | Msa1204380 | 0.804339 | 2.265625e-49 | -8.615850e-47 |
| Msa0148590 | Msa1204380 | 0.804138 | 2.494302e-49 | -8.615850e-47 |
| Msa0160650 | Msa1204380 | 0.800016 | 1.756583e-48 | -8.615850e-47 |
| Msa0184030 | Msa1204380 | 0.809997 | 1.434734e-50 | -8.615850e-47 |
| Msa0187560 | Msa1204380 | 0.825168 | 5.431354e-54 | -8.615850e-47 |
| Msa0198140 | Msa1204380 | 0.822718 | 2.038882e-53 | -8.615850e-47 |
| Msa0198220 | Msa1204380 | 0.824745 | 6.833810e-54 | -8.615850e-47 |
| Msa0210870 | Msa1204380 | 0.801677 | 8.042875e-49 | -8.615850e-47 |
| Msa0221940 | Msa1204380 | 0.845389 | 4.187210e-59 | -8.615850e-47 |
| Msa0226580 | Msa1204380 | 0.813225 | 2.850742e-51 | -8.615850e-47 |
| Msa0228360 | Msa1204380 | 0.824297 | 8.712211e-54 | -8.615850e-47 |
| Msa0229420 | Msa1204380 | 0.804337 | 2.267076e-49 | -8.615850e-47 |
| Msa0375930 | Msa1204380 | 0.811073 | 8.401323e-51 | -8.615850e-47 |
| Msa0415210 | Msa1204380 | 0.811207 | 7.856037e-51 | -8.615850e-47 |
| Msa0416880 | Msa1204380 | 0.801376 | 9.269675e-49 | -8.615850e-47 |
| Msa0424570 | Msa1204380 | 0.812428 | 4.261961e-51 | -8.615850e-47 |
| Msa0425080 | Msa1204380 | 0.815296 | 9.943823e-52 | -8.615850e-47 |
| Msa0426990 | Msa1204380 | 0.801493 | 8.772424e-49 | -8.615850e-47 |
| Msa0429100 | Msa1204380 | 0.827643 | 1.396609e-54 | -8.615850e-47 |
| Msa0431940 | Msa1204380 | 0.801958 | 7.042857e-49 | -8.615850e-47 |
| Msa0481620 | Msa1204380 | 0.831747 | 1.401039e-55 | -8.615850e-47 |
| Msa0998940 | Msa1204380 | 0.835078 | 2.068300e-56 | -8.615850e-47 |
| Msa1029190 | Msa1204380 | 0.838609 | 2.597965e-57 | -8.615850e-47 |
| Msa1031760 | Msa1204380 | 0.813762 | 2.172561e-51 | -8.615850e-47 |
| Msa1038580 | Msa1204380 | 0.808806 | 2.584751e-50 | -8.615850e-47 |
| Msa1044450 | Msa1204380 | 0.808730 | 2.682778e-50 | -8.615850e-47 |
| Msa1049440 | Msa1204380 | 0.801253 | 9.825031e-49 | -8.615850e-47 |
| Msa1065620 | Msa1204380 | 0.837131 | 6.229595e-57 | -8.615850e-47 |
| Msa1071460 | Msa1204380 | 0.815109 | 1.093868e-51 | -8.615850e-47 |
| Msa1090020 | Msa1204380 | 0.830031 | 3.692393e-55 | -8.615850e-47 |
| Msa0240460 | Msa1204380 | 0.805236 | 1.471285e-49 | -8.615850e-47 |
| Msa0252160 | Msa1204380 | 0.802976 | 4.344258e-49 | -8.615850e-47 |
| Msa0263520 | Msa1204380 | 0.838256 | 3.204724e-57 | -8.615850e-47 |
| Msa0270640 | Msa1204380 | 0.837936 | 3.873641e-57 | -8.615850e-47 |
| Msa0278340 | Msa1204380 | 0.821347 | 4.237962e-53 | -8.615850e-47 |
| Msa0301300 | Msa1204380 | 0.800410 | 1.460204e-48 | -8.615850e-47 |
| Msa0338670 | Msa1204380 | 0.836369 | 9.744585e-57 | -8.615850e-47 |
| Msa0343460 | Msa1204380 | 0.833650 | 4.721849e-56 | -8.615850e-47 |
| Msa1129320 | Msa1204380 | 0.834137 | 3.566706e-56 | -8.615850e-47 |
| Msa1147600 | Msa1204380 | 0.846371 | 2.264617e-59 | -8.615850e-47 |
| Msa1154750 | Msa1204380 | 0.819287 | 1.257042e-52 | -8.615850e-47 |
| Msa1161520 | Msa1204380 | 0.801714 | 7.903810e-49 | -8.615850e-47 |
| Msa1172070 | Msa1204380 | 0.809374 | 1.953309e-50 | -8.615850e-47 |
| Msa1186010 | Msa1204380 | 0.821323 | 4.291150e-53 | -8.615850e-47 |
| Msa1203210 | Msa1204380 | 0.805359 | 1.386424e-49 | -8.615850e-47 |
| Msa1204110 | Msa1204380 | 0.816880 | 4.402026e-52 | -8.615850e-47 |
| Msa1204380 | Msa1204390 | 0.818114 | 2.320456e-52 | -8.615850e-47 |
| Msa1204380 | Msa1215660 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa1204380 | Msa1218080 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa1204380 | Msa1230190 | 0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa1204380 | Msa1245300 | 0.814876 | 1.232150e-51 | -8.615850e-47 |
| Msa1204380 | Msa1262740 | 0.835351 | 1.764998e-56 | -8.615850e-47 |
| Msa1204380 | Msa1263610 | 0.837315 | 5.588552e-57 | -8.615850e-47 |
| Msa1204380 | Msa1264140 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
| Msa1204380 | Msa1272770 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa1204380 | Msa1296600 | 0.990834 | 1.490946e-184 | -8.615850e-47 |
| Msa1204380 | Msa1298540 | 0.807715 | 4.414679e-50 | -8.615850e-47 |
| Msa1204380 | Msa1308460 | 0.808099 | 3.657027e-50 | -8.615850e-47 |
| Msa1204380 | Msa1329010 | 0.991188 | 2.431618e-186 | -8.615850e-47 |
| Msa1204380 | Msa1329020 | 0.816891 | 4.376313e-52 | -8.615850e-47 |
| Msa1204380 | Msa1329660 | 0.808066 | 3.717383e-50 | -8.615850e-47 |
| Msa1204380 | Msa1343540 | 0.816621 | 5.031725e-52 | -8.615850e-47 |
| Msa1204380 | Msa1346920 | 0.821798 | 3.333278e-53 | -8.615850e-47 |
| Msa1204380 | Msa1351590 | 0.815435 | 9.256867e-52 | -8.615850e-47 |
| Msa1204380 | Msa1353280 | 0.802391 | 5.737715e-49 | -8.615850e-47 |
| Msa1204380 | Msa1368660 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
| Msa1204380 | Msa1374210 | 0.824869 | 6.389695e-54 | -8.615850e-47 |
| Msa1204380 | Msa1381720 | 0.819842 | 9.390623e-53 | -8.615850e-47 |
| Msa1204380 | Msa1393600 | 0.813091 | 3.050472e-51 | -8.615850e-47 |
| Msa1204380 | Msa1405190 | 0.826291 | 2.941074e-54 | -8.615850e-47 |
| Msa1204380 | Msa1433380 | 0.825919 | 3.604545e-54 | -8.615850e-47 |
| Msa1204380 | Msa1446220 | 0.810806 | 9.599281e-51 | -8.615850e-47 |
| Msa1204380 | Msa1450850 | 0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa1204380 | Msa1454940 | 0.814592 | 1.424340e-51 | -8.615850e-47 |
| Msa1204380 | Msa1456410 | 0.805322 | 1.411964e-49 | -8.615850e-47 |
| Msa1204380 | Msa1458280 | 0.822069 | 2.885115e-53 | -8.615850e-47 |
| Msa0516000 | Msa1204380 | 0.807894 | 4.044905e-50 | -8.615850e-47 |
| Msa0516480 | Msa1204380 | 0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0540120 | Msa1204380 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0546370 | Msa1204380 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0555510 | Msa1204380 | 0.813778 | 2.154596e-51 | -8.615850e-47 |
| Msa0564000 | Msa1204380 | 0.805449 | 1.328068e-49 | -8.615850e-47 |
| Msa0576510 | Msa1204380 | 0.801019 | 1.096853e-48 | -8.615850e-47 |
| Msa0577960 | Msa1204380 | 0.817661 | 2.937445e-52 | -8.615850e-47 |
| Msa0872800 | Msa1204380 | 0.814480 | 1.507650e-51 | -8.615850e-47 |
| Msa0899080 | Msa1204380 | 0.805634 | 1.214175e-49 | -8.615850e-47 |
| Msa0967250 | Msa1204380 | 0.841465 | 4.675677e-58 | -8.615850e-47 |
| Msa0967260 | Msa1204380 | 0.806994 | 6.277572e-50 | -8.615850e-47 |
| Msa0968970 | Msa1204380 | 0.813427 | 2.574425e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204380 | MtrunA17_Chr4g0053421 | 94.118 | 408 | 22 | 1 | 1 | 408 | 1 | 406 | 0.0 | 726 |
| Msa1204380 | MtrunA17_Chr8g0370051 | 97.561 | 82 | 1 | 1 | 295 | 376 | 21 | 101 | 9.70e-51 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1204380 | AT5G67290.1 | 71.622 | 370 | 99 | 2 | 38 | 405 | 40 | 405 | 0.0 | 532 |
Find 185 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCAAGGTTTAGAGTTTC+TGG | 0.052251 | 8_1:-60114981 | Msa1204380:CDS |
| CGTAATAGCATTAGCTTCTT+TGG | 0.192294 | 8_1:+60114929 | None:intergenic |
| GGAAATTGTGATTGGGAAAT+TGG | 0.237880 | 8_1:-60115123 | Msa1204380:CDS |
| AATTATTATTAATTCAGTTT+AGG | 0.252504 | 8_1:+60115836 | None:intergenic |
| ATTATTATTAATTCAGTTTA+GGG | 0.277085 | 8_1:+60115837 | None:intergenic |
| GGGCCCTTGGTCTAGTAAAT+TGG | 0.278810 | 8_1:-60115012 | Msa1204380:CDS |
| GTACTTCTCGAACTTGTTAC+AGG | 0.302335 | 8_1:+60113433 | None:intergenic |
| TGGGCTCTAAAACAATACTA+TGG | 0.307026 | 8_1:+60114949 | None:intergenic |
| CGTCAGCTACTTTGCCGTCT+TGG | 0.313573 | 8_1:-60115262 | Msa1204380:CDS |
| GTTGCTGAGCTTGTACTTGA+TGG | 0.314697 | 8_1:-60113667 | Msa1204380:CDS |
| GTAATAGCATTAGCTTCTTT+GGG | 0.322290 | 8_1:+60114930 | None:intergenic |
| TGTAACGGAGGCACCTTTCT+TGG | 0.330519 | 8_1:+60115514 | None:intergenic |
| TTCCGCCAACTAGTATAATA+TGG | 0.334178 | 8_1:+60115757 | None:intergenic |
| GTTTGCGGTGGCGGAGTTAT+CGG | 0.334496 | 8_1:-60115560 | Msa1204380:CDS |
| TAGGAATCCACCAGCTTTAC+CGG | 0.334757 | 8_1:+60115457 | None:intergenic |
| GATGATGGTGTGCCGATTAT+AGG | 0.335684 | 8_1:-60113775 | Msa1204380:CDS |
| ACTTTGCCGTCTTGGATTGA+TGG | 0.340624 | 8_1:-60115254 | Msa1204380:CDS |
| CCGCAAACAACCACTTTCTT+CGG | 0.343837 | 8_1:+60115575 | None:intergenic |
| TTTAGTCCTGCTAGATTTGT+TGG | 0.345510 | 8_1:-60113616 | Msa1204380:CDS |
| TGGATTGATGGGCCGGCCCA+TGG | 0.348270 | 8_1:-60115242 | Msa1204380:CDS |
| GTTTAGAGTTTCTGGGCTTA+AGG | 0.354081 | 8_1:-60114973 | Msa1204380:CDS |
| GTAGGCCGAGGGTACACTTC+TGG | 0.354479 | 8_1:+60114852 | None:intergenic |
| TCGGTAAAATGCTTAACATT+TGG | 0.366656 | 8_1:+60115962 | None:intergenic |
| GTGGATTCCTAGCTTTAGAT+TGG | 0.367942 | 8_1:-60115445 | Msa1204380:CDS |
| CCACCATTGTTGATCTTAAA+CGG | 0.372685 | 8_1:-60113639 | Msa1204380:CDS |
| CGCAAACAACCACTTTCTTC+GGG | 0.379429 | 8_1:+60115576 | None:intergenic |
| CTCACACACTAAGTCTGATT+TGG | 0.384313 | 8_1:+60113272 | None:intergenic |
| GTGGAAATGCGTATTCTGTT+TGG | 0.388664 | 8_1:+60115647 | None:intergenic |
| GCTCAAGGTTTAGAGTTTCT+GGG | 0.393881 | 8_1:-60114980 | Msa1204380:CDS |
| ACCATTGCTTGTGCCGCTTC+CGG | 0.396774 | 8_1:-60115476 | Msa1204380:CDS |
| TTTCAAGAGTGGTTTAAAAT+CGG | 0.399042 | 8_1:+60115943 | None:intergenic |
| CACTTTCTTCGGGTGATCCA+TGG | 0.400502 | 8_1:+60115586 | None:intergenic |
| TGCATAAAATATGCAAGGTC+CGG | 0.400962 | 8_1:+60113357 | None:intergenic |
| AAGAGGGGTCCTTCGATTAG+AGG | 0.409881 | 8_1:+60114878 | None:intergenic |
| GCCCATGGGCCTAAAACAAT+TGG | 0.415627 | 8_1:-60115227 | Msa1204380:CDS |
| GCCGTCTTGGATTGATGGGC+CGG | 0.417639 | 8_1:-60115249 | Msa1204380:CDS |
| GGATTGATGGGCCGGCCCAT+GGG | 0.421402 | 8_1:-60115241 | Msa1204380:CDS |
| AAAGTGGTTGTTTGCGGTGG+CGG | 0.424230 | 8_1:-60115569 | Msa1204380:CDS |
| CCGATTATAGGAGAGATTCC+TGG | 0.427774 | 8_1:-60113763 | Msa1204380:CDS |
| TCGTTACCCCGTATCTCCTC+TGG | 0.428366 | 8_1:+60113898 | None:intergenic |
| GGGTGTTGTGGATGCGGATG+CGG | 0.429173 | 8_1:-60115048 | Msa1204380:CDS |
| CAATATCTCCAACGTGGATC+CGG | 0.431526 | 8_1:-60115985 | Msa1204380:five_prime_UTR |
| CCAGGAATCTCTCCTATAAT+CGG | 0.432508 | 8_1:+60113763 | None:intergenic |
| CTTTGCCGTCTTGGATTGAT+GGG | 0.436410 | 8_1:-60115253 | Msa1204380:CDS |
| ATTCTCAATGGTCCTGCCAC+TGG | 0.441042 | 8_1:-60113697 | Msa1204380:CDS |
| CTGATGATCCAGAGGAGATA+CGG | 0.442639 | 8_1:-60113906 | Msa1204380:CDS |
| TATGATGTATATATAACTGT+TGG | 0.447454 | 8_1:-60113518 | Msa1204380:three_prime_UTR |
| TTAGTCCTGCTAGATTTGTT+GGG | 0.447933 | 8_1:-60113615 | Msa1204380:CDS |
| GGTGGCCGGGGTTCGAACCC+CGG | 0.448110 | 8_1:-60113376 | Msa1204380:three_prime_UTR |
| CGTATCTCCTCTGGATCATC+AGG | 0.456119 | 8_1:+60113907 | None:intergenic |
| GCAACAGCAGCTCCAGTGGC+AGG | 0.457894 | 8_1:+60113685 | None:intergenic |
| GAAGTGTACCCTCGGCCTAC+AGG | 0.459094 | 8_1:-60114849 | Msa1204380:intron |
| TACGGTGTGGAAATTGTGAT+TGG | 0.463322 | 8_1:-60115131 | Msa1204380:CDS |
| AGACCGTATCAAGCCATCTC+GGG | 0.465287 | 8_1:-60113843 | Msa1204380:CDS |
| GTTGAATCGGTGGTTCTAGA+AGG | 0.466838 | 8_1:-60115074 | Msa1204380:CDS |
| TAGCGACGGGACATAGTTGC+TGG | 0.467406 | 8_1:-60113723 | Msa1204380:CDS |
| CCGAAGAAAGTGGTTGTTTG+CGG | 0.469061 | 8_1:-60115575 | Msa1204380:CDS |
| CTCTTAGTACATGGTGTGGC+AGG | 0.469999 | 8_1:-60113574 | Msa1204380:three_prime_UTR |
| CACGAGCGAGATGTTCCATT+GGG | 0.472582 | 8_1:+60115411 | None:intergenic |
| TCACTGTCTCAAGAGCTTAA+CGG | 0.483959 | 8_1:-60115368 | Msa1204380:CDS |
| TGTGCCGCTTCCGGTAAAGC+TGG | 0.485821 | 8_1:-60115467 | Msa1204380:CDS |
| AATTCAGTTTAGGGAAGCTA+TGG | 0.489428 | 8_1:+60115846 | None:intergenic |
| GCATAAAATATGCAAGGTCC+GGG | 0.491454 | 8_1:+60113358 | None:intergenic |
| GTTGTAATCAGAACACCAAC+TGG | 0.492757 | 8_1:-60115904 | Msa1204380:five_prime_UTR |
| TGAGCTTAGCTCAGTTGGTA+TGG | 0.493252 | 8_1:+60113330 | None:intergenic |
| CCTCGTGAGCTTAGCTCAGT+TGG | 0.495913 | 8_1:+60113325 | None:intergenic |
| GCTTACTTTCTCGCCAAGAA+AGG | 0.496186 | 8_1:-60115527 | Msa1204380:CDS |
| TCCACCAGCTTTACCGGAAG+CGG | 0.498128 | 8_1:+60115463 | None:intergenic |
| TCAAGCCATCTCGGGGAAGA+AGG | 0.503074 | 8_1:-60113835 | Msa1204380:CDS |
| GATTGGGAAATTGGAGAAGT+TGG | 0.503420 | 8_1:-60115114 | Msa1204380:CDS |
| TCACTCCTTCTTCCCCGAGA+TGG | 0.503688 | 8_1:+60113830 | None:intergenic |
| CAGGGGAGGTGTATGTGTGT+GGG | 0.503912 | 8_1:-60113951 | Msa1204380:CDS |
| AATTGGAGTTGTTGAGCTCA+AGG | 0.504811 | 8_1:-60114995 | Msa1204380:CDS |
| GCACGAGCGAGATGTTCCAT+TGG | 0.507781 | 8_1:+60115410 | None:intergenic |
| CGATTATAGGAGAGATTCCT+GGG | 0.510562 | 8_1:-60113762 | Msa1204380:CDS |
| GAGAAGTTGGTGGTGGAAGG+AGG | 0.512798 | 8_1:-60115101 | Msa1204380:CDS |
| AATGACCATATTATACTAGT+TGG | 0.513748 | 8_1:-60115762 | Msa1204380:five_prime_UTR |
| TGATGATCCAGAGGAGATAC+GGG | 0.515059 | 8_1:-60113905 | Msa1204380:CDS |
| TTGGAGAAGTTGGTGGTGGA+AGG | 0.521275 | 8_1:-60115104 | Msa1204380:CDS |
| ATTACAACTCAGATGGATAG+AGG | 0.521278 | 8_1:+60115919 | None:intergenic |
| AAGACCGTATCAAGCCATCT+CGG | 0.521544 | 8_1:-60113844 | Msa1204380:CDS |
| CTCAGCAACAGCAGCTCCAG+TGG | 0.525546 | 8_1:+60113681 | None:intergenic |
| TGTTGTGGATGCGGATGCGG+TGG | 0.525919 | 8_1:-60115045 | Msa1204380:CDS |
| TCAGGGGAGGTGTATGTGTG+TGG | 0.526444 | 8_1:-60113952 | Msa1204380:intron |
| GTGTCCGTGTAAACATTTGC+GGG | 0.527352 | 8_1:+60115177 | None:intergenic |
| ACCGGAAGCGGCACAAGCAA+TGG | 0.527375 | 8_1:+60115475 | None:intergenic |
| GAGAACGCGGTGGAGAAGTA+CGG | 0.529700 | 8_1:-60115149 | Msa1204380:CDS |
| ACTTTCTTCGGGTGATCCAT+GGG | 0.531163 | 8_1:+60115587 | None:intergenic |
| TTCCCCGAGATGGCTTGATA+CGG | 0.532681 | 8_1:+60113840 | None:intergenic |
| ATCGGTGGTTCTAGAAGGTG+GGG | 0.534614 | 8_1:-60115069 | Msa1204380:CDS |
| TATACCAGCCACAAAATACA+AGG | 0.534968 | 8_1:-60115787 | Msa1204380:five_prime_UTR |
| TAAAATGCTTAACATTTGGC+CGG | 0.539242 | 8_1:+60115966 | None:intergenic |
| GGAGAGATTCCTGGGGTGAA+AGG | 0.540724 | 8_1:-60113754 | Msa1204380:CDS |
| AATCGGTGGTTCTAGAAGGT+GGG | 0.541985 | 8_1:-60115070 | Msa1204380:CDS |
| CTAGCTTTAGATTGGTGTGA+CGG | 0.542058 | 8_1:-60115437 | Msa1204380:CDS |
| TGGGAAATTGGAGAAGTTGG+TGG | 0.544163 | 8_1:-60115111 | Msa1204380:CDS |
| TGTTCTGATTACAACTCAGA+TGG | 0.544527 | 8_1:+60115912 | None:intergenic |
| AAGGTCCGGGGTTCGAACCC+CGG | 0.544816 | 8_1:+60113371 | None:intergenic |
| GAAATTGGAGAAGTTGGTGG+TGG | 0.545179 | 8_1:-60115108 | Msa1204380:CDS |
| TACTAAGAGTGACTAAGCCT+TGG | 0.546149 | 8_1:+60113588 | None:intergenic |
| GGAAGGAGGAAAAGTTGAAT+CGG | 0.546489 | 8_1:-60115087 | Msa1204380:CDS |
| GCCGCTTCCGGTAAAGCTGG+TGG | 0.546489 | 8_1:-60115464 | Msa1204380:CDS |
| TGGGATGTCAAAGGAGGAAG+AGG | 0.547600 | 8_1:-60113932 | Msa1204380:CDS |
| TGGATAGAGGATTTCAAGAG+TGG | 0.550064 | 8_1:+60115932 | None:intergenic |
| AAGAAAGTGGTTGTTTGCGG+TGG | 0.550857 | 8_1:-60115572 | Msa1204380:CDS |
| GACCATATTATACTAGTTGG+CGG | 0.551011 | 8_1:-60115759 | Msa1204380:five_prime_UTR |
| CGTCACACCAATCTAAAGCT+AGG | 0.552962 | 8_1:+60115438 | None:intergenic |
| AGTTGCTGGGGTATTCTCAA+TGG | 0.554810 | 8_1:-60113709 | Msa1204380:CDS |
| GATCGATAACCGTATGATTG+TGG | 0.557749 | 8_1:+60115344 | None:intergenic |
| AATCAATTGCGATGCTGAAG+AGG | 0.563061 | 8_1:-60113873 | Msa1204380:CDS |
| AAAGGTTGTTATGTAGCGAC+GGG | 0.565815 | 8_1:-60113736 | Msa1204380:CDS |
| GACAATGCATAAAATATGCA+AGG | 0.573559 | 8_1:+60113352 | None:intergenic |
| GTACGCCCAACAAATCTAGC+AGG | 0.574585 | 8_1:+60113610 | None:intergenic |
| GGGCTCTAAAACAATACTAT+GGG | 0.575399 | 8_1:+60114950 | None:intergenic |
| TAATACAGTTAAAGTCCAGT+TGG | 0.577336 | 8_1:+60115889 | None:intergenic |
| AGTGTCCGTGTAAACATTTG+CGG | 0.578489 | 8_1:+60115176 | None:intergenic |
| TTGGTGTGACGGAGGCCCAA+TGG | 0.578735 | 8_1:-60115426 | Msa1204380:CDS |
| TTGATCCAGAAGTGTACCCT+CGG | 0.583741 | 8_1:-60114857 | Msa1204380:CDS |
| CTATGGTTCTCGATCAAGAA+GGG | 0.586109 | 8_1:+60115863 | None:intergenic |
| CATGGATCACCCGAAGAAAG+TGG | 0.588077 | 8_1:-60115585 | Msa1204380:CDS |
| GAAATGCGTATTCTGTTTGG+AGG | 0.589634 | 8_1:+60115650 | None:intergenic |
| GCTTAGTCACTCTTAGTACA+TGG | 0.592068 | 8_1:-60113583 | Msa1204380:exon |
| ATCAATTGCGATGCTGAAGA+GGG | 0.593161 | 8_1:-60113872 | Msa1204380:CDS |
| GAAAGGTTGTTATGTAGCGA+CGG | 0.593501 | 8_1:-60113737 | Msa1204380:CDS |
| AACACATGAAACGACGGCGC+AGG | 0.595682 | 8_1:-60115204 | Msa1204380:CDS |
| ACAATCATACTTCATGAACT+AGG | 0.597320 | 8_1:-60113302 | Msa1204380:three_prime_UTR |
| AAATTCTCAATCATCGCCCA+TGG | 0.597393 | 8_1:-60115603 | Msa1204380:CDS |
| TAGATTTGTTGGGCGTACCA+AGG | 0.600268 | 8_1:-60113605 | Msa1204380:CDS |
| AGCGACGGGACATAGTTGCT+GGG | 0.602375 | 8_1:-60113722 | Msa1204380:CDS |
| ACGGTGTGGAAATTGTGATT+GGG | 0.603421 | 8_1:-60115130 | Msa1204380:CDS |
| ACATAACAACCTTTCACCCC+AGG | 0.606403 | 8_1:+60113745 | None:intergenic |
| GGGTACACTTCTGGATCAAG+AGG | 0.609222 | 8_1:+60114861 | None:intergenic |
| AGAGGTACCTGATGATCCAG+AGG | 0.611459 | 8_1:-60113914 | Msa1204380:CDS |
| GAATCGGTGGTTCTAGAAGG+TGG | 0.612809 | 8_1:-60115071 | Msa1204380:CDS |
| GGAAGCGGCACAAGCAATGG+TGG | 0.615498 | 8_1:+60115478 | None:intergenic |
| CCAACTGAGCTAAGCTCACG+AGG | 0.617839 | 8_1:-60113325 | Msa1204380:three_prime_UTR |
| AACTCCAATTTACTAGACCA+AGG | 0.620795 | 8_1:+60115008 | None:intergenic |
| GGATTTCTCAATGAGTGTAA+CGG | 0.624743 | 8_1:+60115499 | None:intergenic |
| GGGTCCTTCGATTAGAGGCA+CGG | 0.625148 | 8_1:+60114883 | None:intergenic |
| TTGATTCTTCAGTTACGGTG+AGG | 0.625754 | 8_1:+60115306 | None:intergenic |
| CGGGGAAGAAGGAGTGAAGG+TGG | 0.626528 | 8_1:-60113824 | Msa1204380:CDS |
| TGCACCCGCAAATGTTTACA+CGG | 0.626532 | 8_1:-60115181 | Msa1204380:CDS |
| ACATGCATACCTGTAGGCCG+AGG | 0.628125 | 8_1:+60114840 | None:intergenic |
| GACCGTATCAAGCCATCTCG+GGG | 0.629690 | 8_1:-60113842 | Msa1204380:CDS |
| CTTAACGGTCCACAATCATA+CGG | 0.634820 | 8_1:-60115353 | Msa1204380:CDS |
| GGTACACTTCTGGATCAAGA+GGG | 0.635457 | 8_1:+60114862 | None:intergenic |
| CCGTTTAAGATCAACAATGG+TGG | 0.636811 | 8_1:+60113639 | None:intergenic |
| TAATTGATACATGTATGCGA+AGG | 0.638270 | 8_1:-60115818 | Msa1204380:five_prime_UTR |
| AAACCGTTTAAGATCAACAA+TGG | 0.639170 | 8_1:+60113636 | None:intergenic |
| GCTTTAGATTGGTGTGACGG+AGG | 0.639280 | 8_1:-60115434 | Msa1204380:CDS |
| ACATTTGGCCGGATCCACGT+TGG | 0.639395 | 8_1:+60115977 | None:intergenic |
| GCCGGCCCATCAATCCAAGA+CGG | 0.640743 | 8_1:+60115248 | None:intergenic |
| GCTATGGTTCTCGATCAAGA+AGG | 0.643959 | 8_1:+60115862 | None:intergenic |
| TCTCGGGGAAGAAGGAGTGA+AGG | 0.650707 | 8_1:-60113827 | Msa1204380:CDS |
| TTTCTTGGCGAGAAAGTAAG+CGG | 0.651174 | 8_1:+60115529 | None:intergenic |
| GTATGTGTGTGGGATGTCAA+AGG | 0.654645 | 8_1:-60113941 | Msa1204380:CDS |
| CATAAAATATGCAAGGTCCG+GGG | 0.657923 | 8_1:+60113359 | None:intergenic |
| ACTCCAATTTACTAGACCAA+GGG | 0.659722 | 8_1:+60115009 | None:intergenic |
| CGCGGTGGAGAAGTACGGTG+TGG | 0.659962 | 8_1:-60115144 | Msa1204380:CDS |
| AGGAGGAAAAGTTGAATCGG+TGG | 0.662075 | 8_1:-60115084 | Msa1204380:CDS |
| GCTACCGTGCCTCTAATCGA+AGG | 0.663877 | 8_1:-60114887 | Msa1204380:CDS |
| TAAGCTCTTGAGACAGTGAA+CGG | 0.665750 | 8_1:+60115372 | None:intergenic |
| AATTGGAACACATGAAACGA+CGG | 0.667048 | 8_1:-60115210 | Msa1204380:CDS |
| CATGCATACCTGTAGGCCGA+GGG | 0.669805 | 8_1:+60114841 | None:intergenic |
| AGATTGAACTGAATTGACAG+TGG | 0.671263 | 8_1:+60115628 | None:intergenic |
| GCTAATCTGTATGAATCTAG+CGG | 0.674534 | 8_1:-60115681 | Msa1204380:CDS |
| AGACGGCAAAGTAGCTGACG+AGG | 0.677945 | 8_1:+60115265 | None:intergenic |
| CGGCAAAGTAGCTGACGAGG+AGG | 0.678972 | 8_1:+60115268 | None:intergenic |
| TGTGTGTGGGATGTCAAAGG+AGG | 0.686845 | 8_1:-60113938 | Msa1204380:CDS |
| GCGACGGGACATAGTTGCTG+GGG | 0.688705 | 8_1:-60113721 | Msa1204380:CDS |
| GGCACACCATCATCAGTACA+CGG | 0.689638 | 8_1:+60113784 | None:intergenic |
| GTCACTCTTAGTACATGGTG+TGG | 0.692627 | 8_1:-60113578 | Msa1204380:three_prime_UTR |
| ATACCAGCCACAAAATACAA+GGG | 0.693140 | 8_1:-60115786 | Msa1204380:five_prime_UTR |
| GACACTGATTGAGAACGCGG+TGG | 0.698796 | 8_1:-60115159 | Msa1204380:CDS |
| GCTCTTGAGACAGTGAACGG+TGG | 0.699538 | 8_1:+60115375 | None:intergenic |
| AGTTACGGTGAGGCTGAGAG+CGG | 0.699730 | 8_1:+60115316 | None:intergenic |
| TCGGTGGTTCTAGAAGGTGG+GGG | 0.701122 | 8_1:-60115068 | Msa1204380:CDS |
| TTTCTCAATGAGTGTAACGG+AGG | 0.702173 | 8_1:+60115502 | None:intergenic |
| GTACACTTCTGGATCAAGAG+GGG | 0.705861 | 8_1:+60114863 | None:intergenic |
| ACGGACACTGATTGAGAACG+CGG | 0.711223 | 8_1:-60115162 | Msa1204380:CDS |
| TGACGAGGAGGAAGAAACAG+TGG | 0.711480 | 8_1:+60115280 | None:intergenic |
| ATCAAACAATATCTCCAACG+TGG | 0.727124 | 8_1:-60115991 | Msa1204380:five_prime_UTR |
| AATCTGTATGAATCTAGCGG+CGG | 0.733075 | 8_1:-60115678 | Msa1204380:CDS |
| GATTATAGGAGAGATTCCTG+GGG | 0.781423 | 8_1:-60113761 | Msa1204380:CDS |
| GATGATCCAGAGGAGATACG+GGG | 0.782160 | 8_1:-60113904 | Msa1204380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTTTTTTTTAT+AGG | + | chr8_1:60114912-60114931 | None:intergenic | 0.0% |
| !! | ATAAAAAAAAAAAAAAATTA+AGG | - | chr8_1:60114912-60114931 | Msa1204380:CDS | 0.0% |
| !! | TAAAAAAAAAAAAAAATTAA+GGG | - | chr8_1:60114913-60114932 | Msa1204380:CDS | 0.0% |
| !! | ATTATTATTAATTCAGTTTA+GGG | + | chr8_1:60113440-60113459 | None:intergenic | 10.0% |
| !! | AATTATTATTAATTCAGTTT+AGG | + | chr8_1:60113441-60113460 | None:intergenic | 10.0% |
| !! | AATTTAAAAATCAAAGATAT+CGG | + | chr8_1:60114517-60114536 | None:intergenic | 10.0% |
| !!! | TATCTTTGATTTTTAAATTT+AGG | - | chr8_1:60114518-60114537 | Msa1204380:intron | 10.0% |
| !!! | TATTTTATTTTAAACAATGT+TGG | - | chr8_1:60114557-60114576 | Msa1204380:intron | 10.0% |
| !! | AAAAAAATGAAAAACTAAAG+AGG | - | chr8_1:60113538-60113557 | Msa1204380:three_prime_UTR | 15.0% |
| !!! | TATAATTTACAAACGTATTT+TGG | - | chr8_1:60114754-60114773 | Msa1204380:intron | 15.0% |
| !! | TCACAGAAAACTATTTATTT+AGG | - | chr8_1:60114475-60114494 | Msa1204380:intron | 20.0% |
| !! | GTCTCTTAAATTCATATTAT+GGG | + | chr8_1:60114781-60114800 | None:intergenic | 20.0% |
| !! | AGTCTCTTAAATTCATATTA+TGG | + | chr8_1:60114782-60114801 | None:intergenic | 20.0% |
| !!! | TTCTTTAAAAACACTTAGTT+TGG | + | chr8_1:60114940-60114959 | None:intergenic | 20.0% |
| !! | TTGTTGTATTTATATGCATT+TGG | - | chr8_1:60115028-60115047 | Msa1204380:CDS | 20.0% |
| !! | TAAACATCAGTATCTATTAA+TGG | + | chr8_1:60115294-60115313 | None:intergenic | 20.0% |
| !!! | TGATGTTTATTTTCTTATCA+GGG | - | chr8_1:60115305-60115324 | Msa1204380:CDS | 20.0% |
| !! | TATGATGTATATATAACTGT+TGG | - | chr8_1:60115756-60115775 | Msa1204380:five_prime_UTR | 20.0% |
| !! | TTTCAAGAGTGGTTTAAAAT+CGG | + | chr8_1:60113334-60113353 | None:intergenic | 25.0% |
| ! | AATGACCATATTATACTAGT+TGG | - | chr8_1:60113512-60113531 | Msa1204380:three_prime_UTR | 25.0% |
| !!! | CAGATTAGCATTTTTAGAAT+CGG | + | chr8_1:60113582-60113601 | None:intergenic | 25.0% |
| ! | AATGTTGGTCACTTAAATTA+TGG | - | chr8_1:60114572-60114591 | Msa1204380:intron | 25.0% |
| !!! | ACTTAAGCTTTTTTGTCATT+TGG | - | chr8_1:60114602-60114621 | Msa1204380:intron | 25.0% |
| !!! | CTTAAGCTTTTTTGTCATTT+GGG | - | chr8_1:60114603-60114622 | Msa1204380:intron | 25.0% |
| ! | CAAATGTTAGTAATTACTTC+TGG | + | chr8_1:60114889-60114908 | None:intergenic | 25.0% |
| !!! | GTGTTTTTAAAGAAGCAAAA+TGG | - | chr8_1:60114946-60114965 | Msa1204380:CDS | 25.0% |
| ! | TTTAAAGAAGCAAAATGGAA+AGG | - | chr8_1:60114951-60114970 | Msa1204380:CDS | 25.0% |
| !! | CAAGAATTTCTAAGAACATT+TGG | + | chr8_1:60115011-60115030 | None:intergenic | 25.0% |
| ! | ATCCTTATTCATAGATTTCT+TGG | - | chr8_1:60115051-60115070 | Msa1204380:CDS | 25.0% |
| ! | AACCAAGAAATCTATGAATA+AGG | + | chr8_1:60115056-60115075 | None:intergenic | 25.0% |
| ! | AAATGGTTTGATCCAATTTA+TGG | + | chr8_1:60115079-60115098 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCGAGAAATGT+TGG | - | chr8_1:60115109-60115128 | Msa1204380:CDS | 25.0% |
| !!! | CTGATGTTTATTTTCTTATC+AGG | - | chr8_1:60115304-60115323 | Msa1204380:CDS | 25.0% |
| !!! | GATGTTTATTTTCTTATCAG+GGG | - | chr8_1:60115306-60115325 | Msa1204380:CDS | 25.0% |
| TAAAATGCTTAACATTTGGC+CGG | + | chr8_1:60113311-60113330 | None:intergenic | 30.0% | |
| TCGGTAAAATGCTTAACATT+TGG | + | chr8_1:60113315-60113334 | None:intergenic | 30.0% | |
| TAATACAGTTAAAGTCCAGT+TGG | + | chr8_1:60113388-60113407 | None:intergenic | 30.0% | |
| TAATTGATACATGTATGCGA+AGG | - | chr8_1:60113456-60113475 | Msa1204380:three_prime_UTR | 30.0% | |
| !! | GGTTTTTGATTCTTCAGTTA+CGG | + | chr8_1:60113976-60113995 | None:intergenic | 30.0% |
| ! | TCATGTGTTCCAATTGTTTT+AGG | + | chr8_1:60114059-60114078 | None:intergenic | 30.0% |
| ! | GTAATAGCATTAGCTTCTTT+GGG | + | chr8_1:60114347-60114366 | None:intergenic | 30.0% |
| CTGTGACTAAGATATTTGAT+TGG | + | chr8_1:60114461-60114480 | None:intergenic | 30.0% | |
| GTCACTTAAATTATGGACTT+TGG | - | chr8_1:60114579-60114598 | Msa1204380:intron | 30.0% | |
| GAGTTTAAAAGATGATGTCA+TGG | - | chr8_1:60114855-60114874 | Msa1204380:CDS | 30.0% | |
| AACACCACTTGAAAATGAAA+TGG | - | chr8_1:60114984-60115003 | Msa1204380:CDS | 30.0% | |
| GATTTCTTGGTTCCATAAAT+TGG | - | chr8_1:60115064-60115083 | Msa1204380:CDS | 30.0% | |
| ATTGGATCAAACCATTTCTT+TGG | - | chr8_1:60115082-60115101 | Msa1204380:CDS | 30.0% | |
| TTGAAAAGAGTCCAAAGAAA+TGG | + | chr8_1:60115096-60115115 | None:intergenic | 30.0% | |
| TTGATTGTGTGCTTACTTAT+AGG | - | chr8_1:60115132-60115151 | Msa1204380:CDS | 30.0% | |
| ! | AAACCGTTTAAGATCAACAA+TGG | + | chr8_1:60115641-60115660 | None:intergenic | 30.0% |
| !!! | ACCTTTTCCATTGTTTTTGT+TGG | - | chr8_1:60115874-60115893 | Msa1204380:five_prime_UTR | 30.0% |
| ACCAACAAAAACAATGGAAA+AGG | + | chr8_1:60115878-60115897 | None:intergenic | 30.0% | |
| !!! | TTTTCCATTGTTTTTGTTGG+TGG | - | chr8_1:60115877-60115896 | Msa1204380:five_prime_UTR | 30.0% |
| GACAATGCATAAAATATGCA+AGG | + | chr8_1:60115925-60115944 | None:intergenic | 30.0% | |
| ACAATCATACTTCATGAACT+AGG | - | chr8_1:60115972-60115991 | Msa1204380:five_prime_UTR | 30.0% | |
| ATTACAACTCAGATGGATAG+AGG | + | chr8_1:60113358-60113377 | None:intergenic | 35.0% | |
| TGTTCTGATTACAACTCAGA+TGG | + | chr8_1:60113365-60113384 | None:intergenic | 35.0% | |
| AATTCAGTTTAGGGAAGCTA+TGG | + | chr8_1:60113431-60113450 | None:intergenic | 35.0% | |
| TATACCAGCCACAAAATACA+AGG | - | chr8_1:60113487-60113506 | Msa1204380:three_prime_UTR | 35.0% | |
| ATACCAGCCACAAAATACAA+GGG | - | chr8_1:60113488-60113507 | Msa1204380:three_prime_UTR | 35.0% | |
| ! | GTCATTTCCCTTGTATTTTG+TGG | + | chr8_1:60113498-60113517 | None:intergenic | 35.0% |
| GACCATATTATACTAGTTGG+CGG | - | chr8_1:60113515-60113534 | Msa1204380:three_prime_UTR | 35.0% | |
| TTCCGCCAACTAGTATAATA+TGG | + | chr8_1:60113520-60113539 | None:intergenic | 35.0% | |
| GCTAATCTGTATGAATCTAG+CGG | - | chr8_1:60113593-60113612 | Msa1204380:exon | 35.0% | |
| AGATTGAACTGAATTGACAG+TGG | + | chr8_1:60113649-60113668 | None:intergenic | 35.0% | |
| GGATTTCTCAATGAGTGTAA+CGG | + | chr8_1:60113778-60113797 | None:intergenic | 35.0% | |
| AATTGGAACACATGAAACGA+CGG | - | chr8_1:60114064-60114083 | Msa1204380:intron | 35.0% | |
| GGAAATTGTGATTGGGAAAT+TGG | - | chr8_1:60114151-60114170 | Msa1204380:intron | 35.0% | |
| ACTCCAATTTACTAGACCAA+GGG | + | chr8_1:60114268-60114287 | None:intergenic | 35.0% | |
| AACTCCAATTTACTAGACCA+AGG | + | chr8_1:60114269-60114288 | None:intergenic | 35.0% | |
| !! | GGGCTCTAAAACAATACTAT+GGG | + | chr8_1:60114327-60114346 | None:intergenic | 35.0% |
| !! | TGGGCTCTAAAACAATACTA+TGG | + | chr8_1:60114328-60114347 | None:intergenic | 35.0% |
| ! | CGTAATAGCATTAGCTTCTT+TGG | + | chr8_1:60114348-60114367 | None:intergenic | 35.0% |
| ! | TAGCTAAGAAAAAGAGCATG+TGG | + | chr8_1:60114371-60114390 | None:intergenic | 35.0% |
| CACCTAAAACTTACACACTA+TGG | - | chr8_1:60114649-60114668 | Msa1204380:intron | 35.0% | |
| ! | GACCATAGTGTGTAAGTTTT+AGG | + | chr8_1:60114654-60114673 | None:intergenic | 35.0% |
| TCAACATTGTTAGTTGAGCT+AGG | - | chr8_1:60114695-60114714 | Msa1204380:intron | 35.0% | |
| TACCAATGAAGCTACCTATA+GGG | + | chr8_1:60114817-60114836 | None:intergenic | 35.0% | |
| TTACCAATGAAGCTACCTAT+AGG | + | chr8_1:60114818-60114837 | None:intergenic | 35.0% | |
| !! | TGGACCATTTCATTTTCAAG+TGG | + | chr8_1:60114991-60115010 | None:intergenic | 35.0% |
| ACCTTTGAATTACATGTTCC+AGG | - | chr8_1:60115187-60115206 | Msa1204380:CDS | 35.0% | |
| ACCTGGAACATGTAATTCAA+AGG | + | chr8_1:60115191-60115210 | None:intergenic | 35.0% | |
| !! | GATTTCACTTTTGTGCCAAT+GGG | + | chr8_1:60115215-60115234 | None:intergenic | 35.0% |
| !! | AGATTTCACTTTTGTGCCAA+TGG | + | chr8_1:60115216-60115235 | None:intergenic | 35.0% |
| !! | GTTTATTTTCTTATCAGGGG+AGG | - | chr8_1:60115309-60115328 | Msa1204380:CDS | 35.0% |
| CCACCATTGTTGATCTTAAA+CGG | - | chr8_1:60115635-60115654 | Msa1204380:CDS | 35.0% | |
| TTTAGTCCTGCTAGATTTGT+TGG | - | chr8_1:60115658-60115677 | Msa1204380:CDS | 35.0% | |
| ! | TTAGTCCTGCTAGATTTGTT+GGG | - | chr8_1:60115659-60115678 | Msa1204380:CDS | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | + | chr8_1:60115920-60115939 | None:intergenic | 35.0% | |
| TGGATAGAGGATTTCAAGAG+TGG | + | chr8_1:60113345-60113364 | None:intergenic | 40.0% | |
| GTTGTAATCAGAACACCAAC+TGG | - | chr8_1:60113370-60113389 | Msa1204380:three_prime_UTR | 40.0% | |
| CTATGGTTCTCGATCAAGAA+GGG | + | chr8_1:60113414-60113433 | None:intergenic | 40.0% | |
| ! | TTTCCCTTGTATTTTGTGGC+TGG | + | chr8_1:60113494-60113513 | None:intergenic | 40.0% |
| AATCTGTATGAATCTAGCGG+CGG | - | chr8_1:60113596-60113615 | Msa1204380:exon | 40.0% | |
| GAAATGCGTATTCTGTTTGG+AGG | + | chr8_1:60113627-60113646 | None:intergenic | 40.0% | |
| GTGGAAATGCGTATTCTGTT+TGG | + | chr8_1:60113630-60113649 | None:intergenic | 40.0% | |
| AAATTCTCAATCATCGCCCA+TGG | - | chr8_1:60113671-60113690 | Msa1204380:CDS | 40.0% | |
| TTTCTTGGCGAGAAAGTAAG+CGG | + | chr8_1:60113748-60113767 | None:intergenic | 40.0% | |
| TTTCTCAATGAGTGTAACGG+AGG | + | chr8_1:60113775-60113794 | None:intergenic | 40.0% | |
| !! | GTGGATTCCTAGCTTTAGAT+TGG | - | chr8_1:60113829-60113848 | Msa1204380:CDS | 40.0% |
| !! | CTAGCTTTAGATTGGTGTGA+CGG | - | chr8_1:60113837-60113856 | Msa1204380:CDS | 40.0% |
| TAAGCTCTTGAGACAGTGAA+CGG | + | chr8_1:60113905-60113924 | None:intergenic | 40.0% | |
| TCACTGTCTCAAGAGCTTAA+CGG | - | chr8_1:60113906-60113925 | Msa1204380:CDS | 40.0% | |
| CTTAACGGTCCACAATCATA+CGG | - | chr8_1:60113921-60113940 | Msa1204380:CDS | 40.0% | |
| GATCGATAACCGTATGATTG+TGG | + | chr8_1:60113933-60113952 | None:intergenic | 40.0% | |
| TTGATTCTTCAGTTACGGTG+AGG | + | chr8_1:60113971-60113990 | None:intergenic | 40.0% | |
| !!! | TCCAATTGTTTTAGGCCCAT+GGG | + | chr8_1:60114051-60114070 | None:intergenic | 40.0% |
| !!! | TTCCAATTGTTTTAGGCCCA+TGG | + | chr8_1:60114052-60114071 | None:intergenic | 40.0% |
| AGTGTCCGTGTAAACATTTG+CGG | + | chr8_1:60114101-60114120 | None:intergenic | 40.0% | |
| TACGGTGTGGAAATTGTGAT+TGG | - | chr8_1:60114143-60114162 | Msa1204380:intron | 40.0% | |
| ACGGTGTGGAAATTGTGATT+GGG | - | chr8_1:60114144-60114163 | Msa1204380:intron | 40.0% | |
| GATTGGGAAATTGGAGAAGT+TGG | - | chr8_1:60114160-60114179 | Msa1204380:intron | 40.0% | |
| GGAAGGAGGAAAAGTTGAAT+CGG | - | chr8_1:60114187-60114206 | Msa1204380:intron | 40.0% | |
| AATTGGAGTTGTTGAGCTCA+AGG | - | chr8_1:60114279-60114298 | Msa1204380:intron | 40.0% | |
| ! | AGCTCAAGGTTTAGAGTTTC+TGG | - | chr8_1:60114293-60114312 | Msa1204380:intron | 40.0% |
| ! | GCTCAAGGTTTAGAGTTTCT+GGG | - | chr8_1:60114294-60114313 | Msa1204380:intron | 40.0% |
| ! | GTTTAGAGTTTCTGGGCTTA+AGG | - | chr8_1:60114301-60114320 | Msa1204380:intron | 40.0% |
| ATTGGTACATGCATACCTGT+AGG | + | chr8_1:60114443-60114462 | None:intergenic | 40.0% | |
| GATTATCACCACTTCGTCTA+CGG | + | chr8_1:60114630-60114649 | None:intergenic | 40.0% | |
| ACCAATGAAGCTACCTATAG+GGG | + | chr8_1:60114816-60114835 | None:intergenic | 40.0% | |
| AATCAATTGCGATGCTGAAG+AGG | - | chr8_1:60115401-60115420 | Msa1204380:CDS | 40.0% | |
| ATCAATTGCGATGCTGAAGA+GGG | - | chr8_1:60115402-60115421 | Msa1204380:CDS | 40.0% | |
| !! | TTTTTGCCGTGTACTGATGA+TGG | - | chr8_1:60115484-60115503 | Msa1204380:CDS | 40.0% |
| CCAGGAATCTCTCCTATAAT+CGG | + | chr8_1:60115514-60115533 | None:intergenic | 40.0% | |
| CGATTATAGGAGAGATTCCT+GGG | - | chr8_1:60115512-60115531 | Msa1204380:CDS | 40.0% | |
| GATTATAGGAGAGATTCCTG+GGG | - | chr8_1:60115513-60115532 | Msa1204380:CDS | 40.0% | |
| GAAAGGTTGTTATGTAGCGA+CGG | - | chr8_1:60115537-60115556 | Msa1204380:CDS | 40.0% | |
| AAAGGTTGTTATGTAGCGAC+GGG | - | chr8_1:60115538-60115557 | Msa1204380:CDS | 40.0% | |
| ! | CCGTTTAAGATCAACAATGG+TGG | + | chr8_1:60115638-60115657 | None:intergenic | 40.0% |
| TACTAAGAGTGACTAAGCCT+TGG | + | chr8_1:60115689-60115708 | None:intergenic | 40.0% | |
| GCTTAGTCACTCTTAGTACA+TGG | - | chr8_1:60115691-60115710 | Msa1204380:exon | 40.0% | |
| !! | GTACTTCTCGAACTTGTTAC+AGG | + | chr8_1:60115844-60115863 | None:intergenic | 40.0% |
| !!! | TCCATTGTTTTTGTTGGTGG+TGG | - | chr8_1:60115880-60115899 | Msa1204380:five_prime_UTR | 40.0% |
| CATAAAATATGCAAGGTCCG+GGG | + | chr8_1:60115918-60115937 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr8_1:60115919-60115938 | None:intergenic | 40.0% | |
| CAATATCTCCAACGTGGATC+CGG | - | chr8_1:60113289-60113308 | Msa1204380:three_prime_UTR | 45.0% | |
| GCTATGGTTCTCGATCAAGA+AGG | + | chr8_1:60113415-60113434 | None:intergenic | 45.0% | |
| ACTTTCTTCGGGTGATCCAT+GGG | + | chr8_1:60113690-60113709 | None:intergenic | 45.0% | |
| CGCAAACAACCACTTTCTTC+GGG | + | chr8_1:60113701-60113720 | None:intergenic | 45.0% | |
| CCGCAAACAACCACTTTCTT+CGG | + | chr8_1:60113702-60113721 | None:intergenic | 45.0% | |
| CCGAAGAAAGTGGTTGTTTG+CGG | - | chr8_1:60113699-60113718 | Msa1204380:CDS | 45.0% | |
| AAGAAAGTGGTTGTTTGCGG+TGG | - | chr8_1:60113702-60113721 | Msa1204380:CDS | 45.0% | |
| GCTTACTTTCTCGCCAAGAA+AGG | - | chr8_1:60113747-60113766 | Msa1204380:CDS | 45.0% | |
| TAGGAATCCACCAGCTTTAC+CGG | + | chr8_1:60113820-60113839 | None:intergenic | 45.0% | |
| ! | CGTCACACCAATCTAAAGCT+AGG | + | chr8_1:60113839-60113858 | None:intergenic | 45.0% |
| ACTTTGCCGTCTTGGATTGA+TGG | - | chr8_1:60114020-60114039 | Msa1204380:intron | 45.0% | |
| CTTTGCCGTCTTGGATTGAT+GGG | - | chr8_1:60114021-60114040 | Msa1204380:intron | 45.0% | |
| TGCACCCGCAAATGTTTACA+CGG | - | chr8_1:60114093-60114112 | Msa1204380:intron | 45.0% | |
| GTGTCCGTGTAAACATTTGC+GGG | + | chr8_1:60114100-60114119 | None:intergenic | 45.0% | |
| TGGGAAATTGGAGAAGTTGG+TGG | - | chr8_1:60114163-60114182 | Msa1204380:intron | 45.0% | |
| !! | GAAATTGGAGAAGTTGGTGG+TGG | - | chr8_1:60114166-60114185 | Msa1204380:intron | 45.0% |
| AGGAGGAAAAGTTGAATCGG+TGG | - | chr8_1:60114190-60114209 | Msa1204380:intron | 45.0% | |
| !! | GTTGAATCGGTGGTTCTAGA+AGG | - | chr8_1:60114200-60114219 | Msa1204380:intron | 45.0% |
| !! | AATCGGTGGTTCTAGAAGGT+GGG | - | chr8_1:60114204-60114223 | Msa1204380:intron | 45.0% |
| !!! | GATGCGGTGGTTTTAGCATT+GGG | - | chr8_1:60114242-60114261 | Msa1204380:intron | 45.0% |
| GTACACTTCTGGATCAAGAG+GGG | + | chr8_1:60114414-60114433 | None:intergenic | 45.0% | |
| GGTACACTTCTGGATCAAGA+GGG | + | chr8_1:60114415-60114434 | None:intergenic | 45.0% | |
| ! | TTGATCCAGAAGTGTACCCT+CGG | - | chr8_1:60114417-60114436 | Msa1204380:intron | 45.0% |
| CTCAAATGAAACCCCCCTAT+AGG | - | chr8_1:60114800-60114819 | Msa1204380:intron | 45.0% | |
| CAATGAAGCTACCTATAGGG+GGG | + | chr8_1:60114814-60114833 | None:intergenic | 45.0% | |
| CCAATGAAGCTACCTATAGG+GGG | + | chr8_1:60114815-60114834 | None:intergenic | 45.0% | |
| TACATGTTCCAGGTTCCCAT+TGG | - | chr8_1:60115197-60115216 | Msa1204380:CDS | 45.0% | |
| GTATGTGTGTGGGATGTCAA+AGG | - | chr8_1:60115333-60115352 | Msa1204380:CDS | 45.0% | |
| CTGATGATCCAGAGGAGATA+CGG | - | chr8_1:60115368-60115387 | Msa1204380:CDS | 45.0% | |
| TGATGATCCAGAGGAGATAC+GGG | - | chr8_1:60115369-60115388 | Msa1204380:CDS | 45.0% | |
| AAGACCGTATCAAGCCATCT+CGG | - | chr8_1:60115430-60115449 | Msa1204380:CDS | 45.0% | |
| !! | GATGATGGTGTGCCGATTAT+AGG | - | chr8_1:60115499-60115518 | Msa1204380:CDS | 45.0% |
| CCGATTATAGGAGAGATTCC+TGG | - | chr8_1:60115511-60115530 | Msa1204380:CDS | 45.0% | |
| ACATAACAACCTTTCACCCC+AGG | + | chr8_1:60115532-60115551 | None:intergenic | 45.0% | |
| ! | AGTTGCTGGGGTATTCTCAA+TGG | - | chr8_1:60115565-60115584 | Msa1204380:CDS | 45.0% |
| GTTGCTGAGCTTGTACTTGA+TGG | - | chr8_1:60115607-60115626 | Msa1204380:CDS | 45.0% | |
| !! | TAGATTTGTTGGGCGTACCA+AGG | - | chr8_1:60115669-60115688 | Msa1204380:CDS | 45.0% |
| GTCACTCTTAGTACATGGTG+TGG | - | chr8_1:60115696-60115715 | Msa1204380:exon | 45.0% | |
| GCCACCACCAACAAAAACAA+TGG | + | chr8_1:60115884-60115903 | None:intergenic | 45.0% | |
| !!! | TTGTTTTTGTTGGTGGTGGC+CGG | - | chr8_1:60115884-60115903 | Msa1204380:five_prime_UTR | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr8_1:60115947-60115966 | None:intergenic | 45.0% |
| !! | ATAAAATAAAATAAAATTGA+AGG | + | chr8_1:60114545-60114564 | None:intergenic | 5.0% |
| !! | TTAAATTATAAAAATATTCT+TGG | + | chr8_1:60115812-60115831 | None:intergenic | 5.0% |
| CACTTTCTTCGGGTGATCCA+TGG | + | chr8_1:60113691-60113710 | None:intergenic | 50.0% | |
| CATGGATCACCCGAAGAAAG+TGG | - | chr8_1:60113689-60113708 | Msa1204380:CDS | 50.0% | |
| AAAGTGGTTGTTTGCGGTGG+CGG | - | chr8_1:60113705-60113724 | Msa1204380:CDS | 50.0% | |
| !! | TGTAACGGAGGCACCTTTCT+TGG | + | chr8_1:60113763-60113782 | None:intergenic | 50.0% |
| ! | GCTTTAGATTGGTGTGACGG+AGG | - | chr8_1:60113840-60113859 | Msa1204380:CDS | 50.0% |
| CACGAGCGAGATGTTCCATT+GGG | + | chr8_1:60113866-60113885 | None:intergenic | 50.0% | |
| TGACGAGGAGGAAGAAACAG+TGG | + | chr8_1:60113997-60114016 | None:intergenic | 50.0% | |
| !!! | ATTGTTTTAGGCCCATGGGC+CGG | + | chr8_1:60114047-60114066 | None:intergenic | 50.0% |
| GCCCATGGGCCTAAAACAAT+TGG | - | chr8_1:60114047-60114066 | Msa1204380:intron | 50.0% | |
| ! | ACGGACACTGATTGAGAACG+CGG | - | chr8_1:60114112-60114131 | Msa1204380:intron | 50.0% |
| !! | TTGGAGAAGTTGGTGGTGGA+AGG | - | chr8_1:60114170-60114189 | Msa1204380:intron | 50.0% |
| !! | GAATCGGTGGTTCTAGAAGG+TGG | - | chr8_1:60114203-60114222 | Msa1204380:intron | 50.0% |
| !! | ATCGGTGGTTCTAGAAGGTG+GGG | - | chr8_1:60114205-60114224 | Msa1204380:intron | 50.0% |
| !!! | GGATGCGGTGGTTTTAGCAT+TGG | - | chr8_1:60114241-60114260 | Msa1204380:intron | 50.0% |
| !!! | TGGTTTTAGCATTGGGCCCT+TGG | - | chr8_1:60114249-60114268 | Msa1204380:intron | 50.0% |
| GGGCCCTTGGTCTAGTAAAT+TGG | - | chr8_1:60114262-60114281 | Msa1204380:intron | 50.0% | |
| AAGAGGGGTCCTTCGATTAG+AGG | + | chr8_1:60114399-60114418 | None:intergenic | 50.0% | |
| GGGTACACTTCTGGATCAAG+AGG | + | chr8_1:60114416-60114435 | None:intergenic | 50.0% | |
| ATTTGGGTCCGTAGACGAAG+TGG | - | chr8_1:60114619-60114638 | Msa1204380:intron | 50.0% | |
| CCCCCTATAGGTAGCTTCAT+TGG | - | chr8_1:60114812-60114831 | Msa1204380:intron | 50.0% | |
| ! | CTTTTGTGCCAATGGGAACC+TGG | + | chr8_1:60115208-60115227 | None:intergenic | 50.0% |
| TGTGTGTGGGATGTCAAAGG+AGG | - | chr8_1:60115336-60115355 | Msa1204380:CDS | 50.0% | |
| TGGGATGTCAAAGGAGGAAG+AGG | - | chr8_1:60115342-60115361 | Msa1204380:CDS | 50.0% | |
| !! | AGAGGTACCTGATGATCCAG+AGG | - | chr8_1:60115360-60115379 | Msa1204380:CDS | 50.0% |
| CGTATCTCCTCTGGATCATC+AGG | + | chr8_1:60115370-60115389 | None:intergenic | 50.0% | |
| GATGATCCAGAGGAGATACG+GGG | - | chr8_1:60115370-60115389 | Msa1204380:CDS | 50.0% | |
| AGACCGTATCAAGCCATCTC+GGG | - | chr8_1:60115431-60115450 | Msa1204380:CDS | 50.0% | |
| TTCCCCGAGATGGCTTGATA+CGG | + | chr8_1:60115437-60115456 | None:intergenic | 50.0% | |
| GGCACACCATCATCAGTACA+CGG | + | chr8_1:60115493-60115512 | None:intergenic | 50.0% | |
| ATTCTCAATGGTCCTGCCAC+TGG | - | chr8_1:60115577-60115596 | Msa1204380:CDS | 50.0% | |
| GTACGCCCAACAAATCTAGC+AGG | + | chr8_1:60115667-60115686 | None:intergenic | 50.0% | |
| CTCTTAGTACATGGTGTGGC+AGG | - | chr8_1:60115700-60115719 | Msa1204380:exon | 50.0% | |
| !!! | TGTTTTTGTTGGTGGTGGCC+GGG | - | chr8_1:60115885-60115904 | Msa1204380:five_prime_UTR | 50.0% |
| ACATTTGGCCGGATCCACGT+TGG | + | chr8_1:60113300-60113319 | None:intergenic | 55.0% | |
| !! | GTTTGCGGTGGCGGAGTTAT+CGG | - | chr8_1:60113714-60113733 | Msa1204380:CDS | 55.0% |
| !! | ACCATTGCTTGTGCCGCTTC+CGG | - | chr8_1:60113798-60113817 | Msa1204380:CDS | 55.0% |
| TCCACCAGCTTTACCGGAAG+CGG | + | chr8_1:60113814-60113833 | None:intergenic | 55.0% | |
| GCACGAGCGAGATGTTCCAT+TGG | + | chr8_1:60113867-60113886 | None:intergenic | 55.0% | |
| GCTCTTGAGACAGTGAACGG+TGG | + | chr8_1:60113902-60113921 | None:intergenic | 55.0% | |
| AGTTACGGTGAGGCTGAGAG+CGG | + | chr8_1:60113961-60113980 | None:intergenic | 55.0% | |
| AGACGGCAAAGTAGCTGACG+AGG | + | chr8_1:60114012-60114031 | None:intergenic | 55.0% | |
| ! | CGTCAGCTACTTTGCCGTCT+TGG | - | chr8_1:60114012-60114031 | Msa1204380:intron | 55.0% |
| AACACATGAAACGACGGCGC+AGG | - | chr8_1:60114070-60114089 | Msa1204380:intron | 55.0% | |
| ! | GACACTGATTGAGAACGCGG+TGG | - | chr8_1:60114115-60114134 | Msa1204380:intron | 55.0% |
| GAGAACGCGGTGGAGAAGTA+CGG | - | chr8_1:60114125-60114144 | Msa1204380:intron | 55.0% | |
| !! | GAGAAGTTGGTGGTGGAAGG+AGG | - | chr8_1:60114173-60114192 | Msa1204380:intron | 55.0% |
| !! | TCGGTGGTTCTAGAAGGTGG+GGG | - | chr8_1:60114206-60114225 | Msa1204380:intron | 55.0% |
| !! | TCTAGAAGGTGGGGGTGTTG+TGG | - | chr8_1:60114214-60114233 | Msa1204380:intron | 55.0% |
| GCTACCGTGCCTCTAATCGA+AGG | - | chr8_1:60114387-60114406 | Msa1204380:intron | 55.0% | |
| GGGTCCTTCGATTAGAGGCA+CGG | + | chr8_1:60114394-60114413 | None:intergenic | 55.0% | |
| CATGCATACCTGTAGGCCGA+GGG | + | chr8_1:60114436-60114455 | None:intergenic | 55.0% | |
| ACATGCATACCTGTAGGCCG+AGG | + | chr8_1:60114437-60114456 | None:intergenic | 55.0% | |
| ! | TCAGGGGAGGTGTATGTGTG+TGG | - | chr8_1:60115322-60115341 | Msa1204380:CDS | 55.0% |
| ! | CAGGGGAGGTGTATGTGTGT+GGG | - | chr8_1:60115323-60115342 | Msa1204380:CDS | 55.0% |
| TCGTTACCCCGTATCTCCTC+TGG | + | chr8_1:60115379-60115398 | None:intergenic | 55.0% | |
| GACCGTATCAAGCCATCTCG+GGG | - | chr8_1:60115432-60115451 | Msa1204380:CDS | 55.0% | |
| TCAAGCCATCTCGGGGAAGA+AGG | - | chr8_1:60115439-60115458 | Msa1204380:CDS | 55.0% | |
| TCACTCCTTCTTCCCCGAGA+TGG | + | chr8_1:60115447-60115466 | None:intergenic | 55.0% | |
| TCTCGGGGAAGAAGGAGTGA+AGG | - | chr8_1:60115447-60115466 | Msa1204380:CDS | 55.0% | |
| GGAGAGATTCCTGGGGTGAA+AGG | - | chr8_1:60115520-60115539 | Msa1204380:CDS | 55.0% | |
| TAGCGACGGGACATAGTTGC+TGG | - | chr8_1:60115551-60115570 | Msa1204380:CDS | 55.0% | |
| AGCGACGGGACATAGTTGCT+GGG | - | chr8_1:60115552-60115571 | Msa1204380:CDS | 55.0% | |
| !!! | GTTTTTGTTGGTGGTGGCCG+GGG | - | chr8_1:60115886-60115905 | Msa1204380:five_prime_UTR | 55.0% |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr8_1:60115952-60115971 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr8_1:60115949-60115968 | Msa1204380:five_prime_UTR | 55.0% | |
| GGAAGCGGCACAAGCAATGG+TGG | + | chr8_1:60113799-60113818 | None:intergenic | 60.0% | |
| ACCGGAAGCGGCACAAGCAA+TGG | + | chr8_1:60113802-60113821 | None:intergenic | 60.0% | |
| !! | TGTGCCGCTTCCGGTAAAGC+TGG | - | chr8_1:60113807-60113826 | Msa1204380:CDS | 60.0% |
| ! | TTGGTGTGACGGAGGCCCAA+TGG | - | chr8_1:60113848-60113867 | Msa1204380:CDS | 60.0% |
| CGGCAAAGTAGCTGACGAGG+AGG | + | chr8_1:60114009-60114028 | None:intergenic | 60.0% | |
| ! | GCCGTCTTGGATTGATGGGC+CGG | - | chr8_1:60114025-60114044 | Msa1204380:intron | 60.0% |
| GCCGGCCCATCAATCCAAGA+CGG | + | chr8_1:60114029-60114048 | None:intergenic | 60.0% | |
| !! | AGGTGGGGGTGTTGTGGATG+CGG | - | chr8_1:60114220-60114239 | Msa1204380:intron | 60.0% |
| ! | GGGTGTTGTGGATGCGGATG+CGG | - | chr8_1:60114226-60114245 | Msa1204380:intron | 60.0% |
| TGTTGTGGATGCGGATGCGG+TGG | - | chr8_1:60114229-60114248 | Msa1204380:intron | 60.0% | |
| ! | GTAGGCCGAGGGTACACTTC+TGG | + | chr8_1:60114425-60114444 | None:intergenic | 60.0% |
| GAAGTGTACCCTCGGCCTAC+AGG | - | chr8_1:60114425-60114444 | Msa1204380:intron | 60.0% | |
| CGGGGAAGAAGGAGTGAAGG+TGG | - | chr8_1:60115450-60115469 | Msa1204380:CDS | 60.0% | |
| GCGACGGGACATAGTTGCTG+GGG | - | chr8_1:60115553-60115572 | Msa1204380:CDS | 60.0% | |
| CTCAGCAACAGCAGCTCCAG+TGG | + | chr8_1:60115596-60115615 | None:intergenic | 60.0% | |
| GCCGCTTCCGGTAAAGCTGG+TGG | - | chr8_1:60113810-60113829 | Msa1204380:CDS | 65.0% | |
| ! | TGGATTGATGGGCCGGCCCA+TGG | - | chr8_1:60114032-60114051 | Msa1204380:intron | 65.0% |
| ! | GGATTGATGGGCCGGCCCAT+GGG | - | chr8_1:60114033-60114052 | Msa1204380:intron | 65.0% |
| ! | CGCGGTGGAGAAGTACGGTG+TGG | - | chr8_1:60114130-60114149 | Msa1204380:intron | 65.0% |
| GCAACAGCAGCTCCAGTGGC+AGG | + | chr8_1:60115592-60115611 | None:intergenic | 65.0% | |
| AAGGTCCGGGGTTCGAACCC+CGG | + | chr8_1:60115906-60115925 | None:intergenic | 65.0% | |
| GGTGGCCGGGGTTCGAACCC+CGG | - | chr8_1:60115898-60115917 | Msa1204380:five_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 60113286 | 60116010 | 60113286 | ID=Msa1204380;Name=Msa1204380 |
| chr8_1 | mRNA | 60113286 | 60116010 | 60113286 | ID=Msa1204380-mRNA-1;Parent=Msa1204380;Name=Msa1204380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=305|1|1|1|1|1|2|314|408 |
| chr8_1 | exon | 60113286 | 60113970 | 60113286 | ID=Msa1204380-mRNA-1:exon:19477;Parent=Msa1204380-mRNA-1 |
| chr8_1 | exon | 60114850 | 60116010 | 60114850 | ID=Msa1204380-mRNA-1:exon:19476;Parent=Msa1204380-mRNA-1 |
| chr8_1 | five_prime_UTR | 60115706 | 60116010 | 60115706 | ID=Msa1204380-mRNA-1:five_prime_utr;Parent=Msa1204380-mRNA-1 |
| chr8_1 | CDS | 60114850 | 60115705 | 60114850 | ID=Msa1204380-mRNA-1:cds;Parent=Msa1204380-mRNA-1 |
| chr8_1 | CDS | 60113600 | 60113970 | 60113600 | ID=Msa1204380-mRNA-1:cds;Parent=Msa1204380-mRNA-1 |
| chr8_1 | three_prime_UTR | 60113286 | 60113599 | 60113286 | ID=Msa1204380-mRNA-1:three_prime_utr;Parent=Msa1204380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
