AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415210 MtrunA17_Chr3g0109111 96.750 400 9 2 1 396 1 400 0.0 763
Msa0415210 MtrunA17_Chr3g0109101 85.862 290 39 2 75 363 7 295 1.15e-175 491
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415210 AT3G02690.1 75.915 328 74 2 65 391 89 412 6.74e-167 474

Find 132 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCGATGCTGCTTGCTTTC+AGG 0.060471 3_2:-61286861 Msa0415210:CDS
GTACTTGCTGCTTTGTTATT+TGG 0.128361 3_2:-61285748 Msa0415210:CDS
TAATATCACCGTTCTTCTTT+TGG 0.200999 3_2:-61287054 Msa0415210:CDS
ATTGGGAATGCTAGTGCTTT+TGG 0.236775 3_2:-61283572 Msa0415210:three_prime_UTR
TACCTTCTGGTTTCAATGCT+TGG 0.281970 3_2:-61286907 Msa0415210:CDS
TCTCACCTGTACAGCTTGTT+GGG 0.293813 3_2:-61283718 Msa0415210:CDS
GTCGATGCTGCTTGCTTTCA+GGG 0.300946 3_2:-61286860 Msa0415210:CDS
GCAGAAGACTTCAGCTGGTT+TGG 0.301404 3_2:-61286819 Msa0415210:CDS
CAGAAGACTTCAGCTGGTTT+GGG 0.335089 3_2:-61286818 Msa0415210:CDS
ATTGGAGTTGTTGGAGCTGC+CGG 0.341031 3_2:-61285718 Msa0415210:CDS
GTGCCTTGGGGAAGCGTTAT+GGG 0.347839 3_2:-61287089 Msa0415210:CDS
AAAATGGCATGAACTCGAAT+TGG 0.350977 3_2:-61283590 Msa0415210:three_prime_UTR
GGTGGATTCTGTTGATTTGC+CGG 0.362199 3_2:+61287216 None:intergenic
AGAGGAAGAGCTTTACCTTC+TGG 0.363399 3_2:-61286920 Msa0415210:CDS
TGTGCCTTGGGGAAGCGTTA+TGG 0.370312 3_2:-61287090 Msa0415210:CDS
GATGGAGTGGTGGAAGAAGT+TGG 0.370796 3_2:+61287277 None:intergenic
GGTTGCGGTGACGGCGGTGA+AGG 0.376918 3_2:+61287345 None:intergenic
TTCTCACCTGTACAGCTTGT+TGG 0.377272 3_2:-61283719 Msa0415210:CDS
CATCGAAGAGACTGTGCCTT+GGG 0.379009 3_2:-61287102 Msa0415210:CDS
GGTGAGTCCATTGGAGTTGT+TGG 0.381294 3_2:-61285727 Msa0415210:CDS
GGTGGTGGTGGTTGCGGTGA+CGG 0.383927 3_2:+61287336 None:intergenic
GGAGCTGCCGGGCTTGTACT+TGG 0.385948 3_2:-61285706 Msa0415210:CDS
AAAATTGTATTTACACTGTA+AGG 0.386896 3_2:+61283494 None:intergenic
AACAATGAGCCTGCTGTAAG+TGG 0.386921 3_2:-61284701 Msa0415210:CDS
AGTTGCTCCCATCAAATGAT+AGG 0.387462 3_2:+61285388 None:intergenic
TATTGATTCACAACCTTTGA+CGG 0.403423 3_2:-61285776 Msa0415210:CDS
CACAAATGAAATATACATCT+TGG 0.403871 3_2:-61283319 Msa0415210:three_prime_UTR
CGAAAATTGAGGCAAACATT+GGG 0.404211 3_2:+61284137 None:intergenic
CCTAGCGTAACAGTAATCTA+TGG 0.407940 3_2:+61283405 None:intergenic
AGAGTAGCGGCGGGTGGTGG+TGG 0.412700 3_2:+61287324 None:intergenic
TTTCAGGGGTTTCTTGCTGA+AGG 0.419771 3_2:-61286845 Msa0415210:CDS
CACTGTGGGGAAGTGGGGAG+TGG 0.422259 3_2:-61285362 Msa0415210:CDS
TTCCTTCGTCTTCTTCGGTT+AGG 0.426662 3_2:+61287143 None:intergenic
ATGGAGTGGTGGAAGAAGTT+GGG 0.436184 3_2:+61287278 None:intergenic
CCGAAAATTGAGGCAAACAT+TGG 0.438271 3_2:+61284136 None:intergenic
TGTGGGGAAGTGGGGAGTGG+TGG 0.438538 3_2:-61285359 Msa0415210:CDS
ACCCATCCAGTTGCCATGAT+AGG 0.438828 3_2:+61285267 None:intergenic
GCGGCGGGTGGTGGTGGTTG+CGG 0.441258 3_2:+61287330 None:intergenic
TTGGAGTTGTTGGAGCTGCC+GGG 0.442346 3_2:-61285717 Msa0415210:CDS
TTACCTGCCCTATCATTTGA+TGG 0.443344 3_2:-61285396 Msa0415210:CDS
AACTTCTCACTGTGGGGAAG+TGG 0.443633 3_2:-61285369 Msa0415210:CDS
AAATGGCATGAACTCGAATT+GGG 0.452973 3_2:-61283589 Msa0415210:three_prime_UTR
GTGGAAGAAGTTGGGAATTG+AGG 0.453224 3_2:+61287286 None:intergenic
AAAGAAGTGATTCCTAATTA+CGG 0.454305 3_2:-61287010 Msa0415210:CDS
TCTGATCCTATCATGGCAAC+TGG 0.460438 3_2:-61285273 Msa0415210:CDS
TTGCAGCATATGGTTATTGG+TGG 0.460764 3_2:-61284752 Msa0415210:intron
TTGGTAGATTGCGTAGGAAC+AGG 0.464261 3_2:-61287184 Msa0415210:CDS
CATGATAGGATCAGAGTACT+TGG 0.465171 3_2:+61285281 None:intergenic
TTCAGGGGTTTCTTGCTGAA+GGG 0.468219 3_2:-61286844 Msa0415210:CDS
TTGTTATTTGGTGAGTCCAT+TGG 0.469846 3_2:-61285736 Msa0415210:CDS
GAAAGAGTAGCGGCGGGTGG+TGG 0.471413 3_2:+61287321 None:intergenic
GTTGCGGTGACGGCGGTGAA+GGG 0.482225 3_2:+61287346 None:intergenic
TTTGGAAGTGCTGTTAGCTA+TGG 0.483715 3_2:-61284623 Msa0415210:CDS
ACAAATGAAATATACATCTT+GGG 0.490952 3_2:-61283318 Msa0415210:three_prime_UTR
GTACAGTTCAACGGATGTAT+TGG 0.491468 3_2:-61284666 Msa0415210:CDS
ATGCGGAAACGGAGAGAAGA+TGG 0.492013 3_2:+61287259 None:intergenic
CTGGCCCCAACAAGCTGTAC+AGG 0.499277 3_2:+61283713 None:intergenic
GGGTTGCAGAAGACTTCAGC+TGG 0.500512 3_2:-61286824 Msa0415210:CDS
CAAGTACTCTGATCCTATCA+TGG 0.508310 3_2:-61285280 Msa0415210:CDS
ACTTCTCACTGTGGGGAAGT+GGG 0.511659 3_2:-61285368 Msa0415210:CDS
CCATAGATTACTGTTACGCT+AGG 0.515095 3_2:-61283405 Msa0415210:three_prime_UTR
GCAAGTACAGCCACCGTCAA+AGG 0.517053 3_2:+61285763 None:intergenic
ATCCTATCATGGCAACTGGA+TGG 0.518310 3_2:-61285269 Msa0415210:CDS
CAAGCCTCGTACTGCACAGA+TGG 0.525945 3_2:-61283449 Msa0415210:three_prime_UTR
GGGCTTGTACTTGGCGTCGT+AGG 0.527479 3_2:-61285697 Msa0415210:CDS
TTGGCACTGTCATGGTTCGG+TGG 0.529695 3_2:-61285308 Msa0415210:CDS
CTCACCTGTACAGCTTGTTG+GGG 0.533384 3_2:-61283717 Msa0415210:CDS
TGGAGCATGGAATGCGGAAA+CGG 0.533737 3_2:+61287248 None:intergenic
TGGCACTGTCATGGTTCGGT+GGG 0.533959 3_2:-61285307 Msa0415210:CDS
TACCTGCCCTATCATTTGAT+GGG 0.539425 3_2:-61285395 Msa0415210:CDS
CTTCTCACTGTGGGGAAGTG+GGG 0.546730 3_2:-61285367 Msa0415210:CDS
TGGGAGCAACTTCTCACTGT+GGG 0.546919 3_2:-61285376 Msa0415210:CDS
ACGGAGAGAAGATGGAGTGG+TGG 0.552388 3_2:+61287267 None:intergenic
GGCAGCTCCAACAACTCCAA+TGG 0.552770 3_2:+61285720 None:intergenic
GGTGACGGCGGTGAAGGGAG+TGG 0.554503 3_2:+61287351 None:intergenic
GCTTCTTGCAGCTCAGAGCA+TGG 0.554655 3_2:-61285334 Msa0415210:CDS
TCCTATCATGGCAACTGGAT+GGG 0.555793 3_2:-61285268 Msa0415210:intron
TTAAGACTCCCACTTACAGC+AGG 0.557189 3_2:+61284692 None:intergenic
TATAGATTATGACTTGTGTA+TGG 0.557434 3_2:-61283368 Msa0415210:three_prime_UTR
TCATCGAAGAGACTGTGCCT+TGG 0.558301 3_2:-61287103 Msa0415210:CDS
CGTAGGACTTGTGTTACTTG+AGG 0.562304 3_2:-61285680 Msa0415210:intron
CTCCCATCAAATGATAGGGC+AGG 0.566112 3_2:+61285393 None:intergenic
CAGTTGGCACTGTCATGGTT+CGG 0.567605 3_2:-61285311 Msa0415210:CDS
TACTGTAGCTGCAATATACA+TGG 0.570176 3_2:-61283687 Msa0415210:CDS
CGGCGACAGCATGGCCACGA+TGG 0.570207 3_2:+61287384 None:intergenic
CGTAGGAACAGGACAAGATG+TGG 0.575114 3_2:-61287173 Msa0415210:CDS
ATCTACCAACTCGAGGTCGG+TGG 0.578134 3_2:+61287198 None:intergenic
GCAACAAGAAGAAACCCAGC+TGG 0.582668 3_2:+61286956 None:intergenic
CATGGCAGTTGGCACTGTCA+TGG 0.583057 3_2:-61285316 Msa0415210:CDS
GTTGCTCCCATCAAATGATA+GGG 0.584772 3_2:+61285389 None:intergenic
TACGACGCCAAGTACAAGCC+CGG 0.585440 3_2:+61285699 None:intergenic
TCGATGCTGCTTGCTTTCAG+GGG 0.585931 3_2:-61286859 Msa0415210:CDS
GCAGCTCAGAGCATGGCAGT+TGG 0.587376 3_2:-61285327 Msa0415210:CDS
TGGGAATTGAGGAGTGTGAG+AGG 0.588985 3_2:+61287297 None:intergenic
CAAGTTCAATTAAGCACTTG+TGG 0.589636 3_2:-61287454 Msa0415210:five_prime_UTR
GGTGGTGGTTGCGGTGACGG+CGG 0.590085 3_2:+61287339 None:intergenic
TGATTCACAACCTTTGACGG+TGG 0.594698 3_2:-61285773 Msa0415210:CDS
ATCCAAGCATTGAAACCAGA+AGG 0.594844 3_2:+61286905 None:intergenic
GTAGCACCACGGCGACAGCA+TGG 0.599780 3_2:+61287375 None:intergenic
GCAGTCTTACCCGAAAATTG+AGG 0.600905 3_2:+61284126 None:intergenic
TAAGAATCGCGAATGCCACA+AGG 0.602922 3_2:+61284723 None:intergenic
CCATGCTCCAACAAAACCAC+CGG 0.603023 3_2:-61287235 Msa0415210:CDS
GCAATCTACCAACTCGAGGT+CGG 0.604725 3_2:+61287195 None:intergenic
TCTGCCATCTGTGCAGTACG+AGG 0.611982 3_2:+61283445 None:intergenic
AGAGGTGAAAGAGTAGCGGC+GGG 0.615126 3_2:+61287315 None:intergenic
AGAATCCACCGACCTCGAGT+TGG 0.615914 3_2:-61287203 Msa0415210:CDS
CTTGGGGAAGCGTTATGGGA+AGG 0.616732 3_2:-61287085 Msa0415210:CDS
ACAATGAGCCTGCTGTAAGT+GGG 0.625638 3_2:-61284700 Msa0415210:CDS
GAGAGGTGAAAGAGTAGCGG+CGG 0.626582 3_2:+61287314 None:intergenic
TATTGCAGCTACAGTAACAC+TGG 0.628956 3_2:+61283694 None:intergenic
AAGAATCGCGAATGCCACAA+GGG 0.631679 3_2:+61284724 None:intergenic
GTGCTTAAGATCACATATCA+CGG 0.639978 3_2:+61283528 None:intergenic
GAAAATTGAGGCAAACATTG+GGG 0.640798 3_2:+61284138 None:intergenic
TCTTAAAGAGTACAGTTCAA+CGG 0.646276 3_2:-61284675 Msa0415210:CDS
GCAGTTCCCCAAAAGAAGAA+CGG 0.646412 3_2:+61287046 None:intergenic
ATGGGAGCAACTTCTCACTG+TGG 0.649529 3_2:-61285377 Msa0415210:CDS
GGTGAAAGAGTAGCGGCGGG+TGG 0.654425 3_2:+61287318 None:intergenic
ATCGAAGAGACTGTGCCTTG+GGG 0.656879 3_2:-61287101 Msa0415210:CDS
GAAACGGAGAGAAGATGGAG+TGG 0.658221 3_2:+61287264 None:intergenic
CTTCCCATAACGCTTCCCCA+AGG 0.660357 3_2:+61287086 None:intergenic
AGAATCGCGAATGCCACAAG+GGG 0.663619 3_2:+61284725 None:intergenic
CTACGCAATCTACCAACTCG+AGG 0.669742 3_2:+61287191 None:intergenic
TGTGAGAGGTGAAAGAGTAG+CGG 0.670902 3_2:+61287311 None:intergenic
GGATTCTGTTGATTTGCCGG+TGG 0.671329 3_2:+61287219 None:intergenic
AACTCCACTCACTTCCATCG+TGG 0.678319 3_2:-61287398 Msa0415210:five_prime_UTR
CTCGAGTTGGTAGATTGCGT+AGG 0.679030 3_2:-61287190 Msa0415210:CDS
CTCCTAACCGAAGAAGACGA+AGG 0.687930 3_2:-61287145 Msa0415210:CDS
ATGGCCACGATGGAAGTGAG+TGG 0.695329 3_2:+61287394 None:intergenic
TCGTGGCCATGCTGTCGCCG+TGG 0.699440 3_2:-61287381 Msa0415210:exon
GGGAGCAACTTCTCACTGTG+GGG 0.700978 3_2:-61285375 Msa0415210:CDS
AAGGGAGTGGAGTAGCACCA+CGG 0.710930 3_2:+61287364 None:intergenic
GAATCGCGAATGCCACAAGG+GGG 0.735698 3_2:+61284726 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTATTTTTTTTT+TGG - chr3_2:61286677-61286696 Msa0415210:intron 0.0%
!!! TTTCATTATATTTATTTTTG+CGG - chr3_2:61285633-61285652 Msa0415210:intron 10.0%
!!! AATTTGTTAAAAAAAAAAAG+AGG - chr3_2:61285895-61285914 Msa0415210:intron 10.0%
!!! TTTTTTTTTTTTAAAGAAAG+TGG + chr3_2:61286350-61286369 None:intergenic 10.0%
!! AAAAATAAAAAATAAAAACC+CGG + chr3_2:61286667-61286686 None:intergenic 10.0%
!! AAATATATAATTGTAAAAGA+TGG + chr3_2:61286795-61286814 None:intergenic 10.0%
!!! AGATTTTGATTTCTAATTTT+GGG + chr3_2:61285154-61285173 None:intergenic 15.0%
!!! AAGATTTTGATTTCTAATTT+TGG + chr3_2:61285155-61285174 None:intergenic 15.0%
!!! AAAATCTTTTACATATATTG+TGG - chr3_2:61285167-61285186 Msa0415210:intron 15.0%
!! TAAAAATTACAAAATCAACT+AGG + chr3_2:61285255-61285274 None:intergenic 15.0%
!!! TCTTGATTTTTAATTGAAAA+AGG + chr3_2:61285579-61285598 None:intergenic 15.0%
!! TAAATATATGAATTTCAACA+AGG - chr3_2:61286234-61286253 Msa0415210:intron 15.0%
!!! AAAATATTTGAATTTTCTAG+AGG + chr3_2:61286916-61286935 None:intergenic 15.0%
!!! TTATATATTAAGTTTTCTAC+TGG - chr3_2:61287110-61287129 Msa0415210:CDS 15.0%
!! TAACATATCTATTCTACAAA+AGG + chr3_2:61284210-61284229 None:intergenic 20.0%
!! TACTAGTAGTACTATTAATA+AGG - chr3_2:61284228-61284247 Msa0415210:intron 20.0%
!! ACTAGTAGTACTATTAATAA+GGG - chr3_2:61284229-61284248 Msa0415210:intron 20.0%
!!! TACTTGAGGTATTTTAATTT+TGG - chr3_2:61285081-61285100 Msa0415210:intron 20.0%
!!! TAATTTTGGTTTTAACCTAA+AGG - chr3_2:61285095-61285114 Msa0415210:intron 20.0%
!!! GATAATTTTATGCTATGAAA+CGG - chr3_2:61285535-61285554 Msa0415210:intron 20.0%
!!! TTTTAAATTGTAACGCAAAA+AGG + chr3_2:61285678-61285697 None:intergenic 20.0%
!! TAGTGAAATGATGATTATAT+AGG - chr3_2:61285834-61285853 Msa0415210:intron 20.0%
!! ATAAATGAAAATTCACAGAA+AGG + chr3_2:61286208-61286227 None:intergenic 20.0%
!! AAATATGTAAGTGTACAAAA+TGG + chr3_2:61286465-61286484 None:intergenic 20.0%
!! TAATATGGTGTATTCTTTAT+GGG + chr3_2:61286522-61286541 None:intergenic 20.0%
!! ATAATATGGTGTATTCTTTA+TGG + chr3_2:61286523-61286542 None:intergenic 20.0%
!! GATACTTCAATAAATTATGA+AGG + chr3_2:61286846-61286865 None:intergenic 20.0%
!! AAAATTGTATTTACACTGTA+AGG + chr3_2:61287256-61287275 None:intergenic 20.0%
!!! TTTTGATTAGTTGTAAATTC+AGG - chr3_2:61287272-61287291 Msa0415210:CDS 20.0%
!! ACAAATGAAATATACATCTT+GGG - chr3_2:61287429-61287448 Msa0415210:five_prime_UTR 20.0%
! AAAGAAGTGATTCCTAATTA+CGG - chr3_2:61283737-61283756 Msa0415210:CDS 25.0%
! TTGAATTAGAGCTTATAGTT+AGG - chr3_2:61284283-61284302 Msa0415210:intron 25.0%
! TGAATTAGAGCTTATAGTTA+GGG - chr3_2:61284284-61284303 Msa0415210:intron 25.0%
! TTCAAATGAAGCTTACATTT+AGG - chr3_2:61284326-61284345 Msa0415210:intron 25.0%
! TCAAATGAAGCTTACATTTA+GGG - chr3_2:61284327-61284346 Msa0415210:intron 25.0%
! GTGTTTCATATTGATAGATA+TGG - chr3_2:61284823-61284842 Msa0415210:intron 25.0%
!!! TATTGATAGATATGGATTAG+AGG - chr3_2:61284831-61284850 Msa0415210:intron 25.0%
!! TTTACATATATTGTGGATTG+CGG - chr3_2:61285174-61285193 Msa0415210:intron 25.0%
!! TTTTAGCATACAATTTCTCT+TGG - chr3_2:61285270-61285289 Msa0415210:CDS 25.0%
! CTTTAGTGAATAAACATAGA+AGG + chr3_2:61285307-61285326 None:intergenic 25.0%
!! AAATTCACACTTTTGTAAAC+TGG + chr3_2:61285714-61285733 None:intergenic 25.0%
!! AGTTTACAAAAGTGTGAATT+TGG - chr3_2:61285713-61285732 Msa0415210:CDS 25.0%
!! GTTTACAAAAGTGTGAATTT+GGG - chr3_2:61285714-61285733 Msa0415210:CDS 25.0%
! GTTAAAAAAAAAAAGAGGCA+TGG - chr3_2:61285900-61285919 Msa0415210:intron 25.0%
!! TGTTTTCTTGAAAAATGAGA+GGG + chr3_2:61286376-61286395 None:intergenic 25.0%
!! ATGTTTTCTTGAAAAATGAG+AGG + chr3_2:61286377-61286396 None:intergenic 25.0%
! TACTAATTACCATATTGAAG+AGG + chr3_2:61286424-61286443 None:intergenic 25.0%
! GCACAATGTCAATAATAATA+TGG + chr3_2:61286537-61286556 None:intergenic 25.0%
! AAAATCAGAAAGACAACTAA+TGG - chr3_2:61286721-61286740 Msa0415210:intron 25.0%
! CTATGTAGCAATTCTTTAAA+CGG - chr3_2:61286744-61286763 Msa0415210:intron 25.0%
! AAATTATGAAGGATGTAAGT+GGG + chr3_2:61286835-61286854 None:intergenic 25.0%
! TAAATTATGAAGGATGTAAG+TGG + chr3_2:61286836-61286855 None:intergenic 25.0%
! ACGAAAAAATGTGTATACAA+AGG + chr3_2:61286974-61286993 None:intergenic 25.0%
!!! TGTATACACATTTTTTCGTT+TGG - chr3_2:61286975-61286994 Msa0415210:CDS 25.0%
!!! ATTTTTTCGTTTGGTATTTC+AGG - chr3_2:61286984-61287003 Msa0415210:CDS 25.0%
!!! TATTTCAGGTTTTTGTATCT+CGG - chr3_2:61286998-61287017 Msa0415210:CDS 25.0%
!! TATAGATTATGACTTGTGTA+TGG - chr3_2:61287379-61287398 Msa0415210:exon 25.0%
! CACAAATGAAATATACATCT+TGG - chr3_2:61287428-61287447 Msa0415210:five_prime_UTR 25.0%
!!! TTTGATGCTGAGATTTTTTG+TGG + chr3_2:61283331-61283350 None:intergenic 30.0%
! TAATATCACCGTTCTTCTTT+TGG - chr3_2:61283693-61283712 Msa0415210:CDS 30.0%
! AATATCACCGTTCTTCTTTT+GGG - chr3_2:61283694-61283713 Msa0415210:CDS 30.0%
AAACGTTGGATATATAAGAG+AGG - chr3_2:61284437-61284456 Msa0415210:intron 30.0%
ATAAAAACCCAAACATGTTG+GGG + chr3_2:61284569-61284588 None:intergenic 30.0%
CATAAAAACCCAAACATGTT+GGG + chr3_2:61284570-61284589 None:intergenic 30.0%
ACATAAAAACCCAAACATGT+TGG + chr3_2:61284571-61284590 None:intergenic 30.0%
ACTGTAGTGTAGTTCTTATT+TGG - chr3_2:61284615-61284634 Msa0415210:CDS 30.0%
!!! GCTTAGTTTTATGTTGTAAC+CGG - chr3_2:61284651-61284670 Msa0415210:CDS 30.0%
AAAAGTTGGGGATTCATATT+TGG + chr3_2:61284681-61284700 None:intergenic 30.0%
!! TATTGATAGACATGGATTAG+AGG + chr3_2:61284782-61284801 None:intergenic 30.0%
CAGATTCATATTGATAGACA+TGG + chr3_2:61284790-61284809 None:intergenic 30.0%
!!! GTCAACTTTTTGTGTTGATT+CGG - chr3_2:61284868-61284887 Msa0415210:intron 30.0%
!!! TGTTGCTTGTTTTAACTATC+TGG - chr3_2:61284927-61284946 Msa0415210:intron 30.0%
!! TATTGATTCACAACCTTTGA+CGG - chr3_2:61284971-61284990 Msa0415210:intron 30.0%
AACTAGGTAATTGTATGTTG+TGG + chr3_2:61285239-61285258 None:intergenic 30.0%
! TATTTCTGCAACTATGATCA+GGG + chr3_2:61285771-61285790 None:intergenic 30.0%
! ATATTTCTGCAACTATGATC+AGG + chr3_2:61285772-61285791 None:intergenic 30.0%
! TCTTAAAGAGTACAGTTCAA+CGG - chr3_2:61286072-61286091 Msa0415210:intron 30.0%
! TTCTTTTACAGTGCAACTAA+AGG - chr3_2:61286151-61286170 Msa0415210:intron 30.0%
!! ATTTTGACCTTGTAACCTTA+AGG - chr3_2:61286276-61286295 Msa0415210:intron 30.0%
! TTTTGACCTTGTAACCTTAA+GGG - chr3_2:61286277-61286296 Msa0415210:intron 30.0%
! GTTTTCTTGAAAAATGAGAG+GGG + chr3_2:61286375-61286394 None:intergenic 30.0%
CATCCATGTAAAATCCAAAA+CGG - chr3_2:61286394-61286413 Msa0415210:intron 30.0%
!! TAACCGTTTTGGATTTTACA+TGG + chr3_2:61286400-61286419 None:intergenic 30.0%
!!! GGTCAATTTTTTCTCTTGAA+TGG + chr3_2:61286774-61286793 None:intergenic 30.0%
! CATGTTTGTGTATCTTTTTG+AGG - chr3_2:61286947-61286966 Msa0415210:CDS 30.0%
!! TGTATGGCAAGTTTTGTATA+TGG - chr3_2:61287395-61287414 Msa0415210:exon 30.0%
CAAGTTCAATTAAGCACTTG+TGG - chr3_2:61283293-61283312 Msa0415210:three_prime_UTR 35.0%
! TGTTTTTCCTTCGTCTTCTT+CGG + chr3_2:61283612-61283631 None:intergenic 35.0%
! ATATCACCGTTCTTCTTTTG+GGG - chr3_2:61283695-61283714 Msa0415210:CDS 35.0%
ACGAAAAAAGGACCGTAATT+AGG + chr3_2:61283752-61283771 None:intergenic 35.0%
! TCTTTTCGTTTAATTCCAGC+TGG - chr3_2:61283776-61283795 Msa0415210:intron 35.0%
! CTTTTCGTTTAATTCCAGCT+GGG - chr3_2:61283777-61283796 Msa0415210:intron 35.0%
AAGCTGAAAACAGCTTATGA+AGG - chr3_2:61284131-61284150 Msa0415210:intron 35.0%
TAGAGCTTATAGTTAGGGTT+AGG - chr3_2:61284289-61284308 Msa0415210:intron 35.0%
AGAGCTTATAGTTAGGGTTA+GGG - chr3_2:61284290-61284309 Msa0415210:intron 35.0%
!!! TTGTTGCTGCTTTGTTTTGT+TGG - chr3_2:61284368-61284387 Msa0415210:intron 35.0%
!! CTTTAAGGCAATGGGTTTAT+GGG + chr3_2:61284466-61284485 None:intergenic 35.0%
!! ACTTTAAGGCAATGGGTTTA+TGG + chr3_2:61284467-61284486 None:intergenic 35.0%
! AACCCATTGCCTTAAAGTTT+TGG - chr3_2:61284469-61284488 Msa0415210:intron 35.0%
! ACCCATTGCCTTAAAGTTTT+GGG - chr3_2:61284470-61284489 Msa0415210:intron 35.0%
!! ACCCAAAACTTTAAGGCAAT+GGG + chr3_2:61284474-61284493 None:intergenic 35.0%
!! TACCCAAAACTTTAAGGCAA+TGG + chr3_2:61284475-61284494 None:intergenic 35.0%
CACTCTTACCCAAAACTTTA+AGG + chr3_2:61284481-61284500 None:intergenic 35.0%
!!! TAAAGTTTTGGGTAAGAGTG+TGG - chr3_2:61284481-61284500 Msa0415210:intron 35.0%
!! AGTTCTTATTTGGTGCACAT+TGG - chr3_2:61284625-61284644 Msa0415210:CDS 35.0%
!! AGTTCTTATTTGGTGCACAT+TGG + chr3_2:61284625-61284644 None:intergenic 35.0%
ACTGCAGTGTAGTTCTTATT+TGG + chr3_2:61284726-61284745 None:intergenic 35.0%
!! ATGGATTAGAGGAAAAGTTG+GGG + chr3_2:61284842-61284861 None:intergenic 35.0%
!! CATGGATTAGAGGAAAAGTT+GGG + chr3_2:61284772-61284791 None:intergenic 35.0%
!! ACATGGATTAGAGGAAAAGT+TGG + chr3_2:61284773-61284792 None:intergenic 35.0%
!!! CTTGTTTTAACTATCTGGCA+TGG - chr3_2:61284932-61284951 Msa0415210:intron 35.0%
!! GTACTTGCTGCTTTGTTATT+TGG - chr3_2:61284999-61285018 Msa0415210:intron 35.0%
!! TTGTTATTTGGTGAGTCCAT+TGG - chr3_2:61285011-61285030 Msa0415210:intron 35.0%
CGAATTAAGACACTTCCTTT+AGG + chr3_2:61285113-61285132 None:intergenic 35.0%
! AATTTTGGGCTGTGCTTAAA+GGG + chr3_2:61285140-61285159 None:intergenic 35.0%
! TAATTTTGGGCTGTGCTTAA+AGG + chr3_2:61285141-61285160 None:intergenic 35.0%
TTCACTAAAGCAAACACTAC+TGG - chr3_2:61285317-61285336 Msa0415210:CDS 35.0%
CCATATGCTGCAAAAGAAAA+AGG + chr3_2:61285988-61286007 None:intergenic 35.0%
! CCTTTTTCTTTTGCAGCATA+TGG - chr3_2:61285985-61286004 Msa0415210:intron 35.0%
! CTTTTGCAGCATATGGTTAT+TGG - chr3_2:61285992-61286011 Msa0415210:intron 35.0%
! ATTGAAGAGGTTAACCGTTT+TGG + chr3_2:61286411-61286430 None:intergenic 35.0%
AACGGTTAACCTCTTCAATA+TGG - chr3_2:61286412-61286431 Msa0415210:intron 35.0%
GAAAATTGAGGCAAACATTG+GGG + chr3_2:61286612-61286631 None:intergenic 35.0%
CGAAAATTGAGGCAAACATT+GGG + chr3_2:61286613-61286632 None:intergenic 35.0%
! CCAATGTTTGCCTCAATTTT+CGG - chr3_2:61286611-61286630 Msa0415210:intron 35.0%
! CAATGTTTGCCTCAATTTTC+GGG - chr3_2:61286612-61286631 Msa0415210:intron 35.0%
GTAGCAATTCTTTAAACGGA+AGG - chr3_2:61286748-61286767 Msa0415210:intron 35.0%
! TTTTTCGTACCTTTTGTCAC+CGG - chr3_2:61286885-61286904 Msa0415210:CDS 35.0%
!! GAATTTTCTAGAGGAAATGC+CGG + chr3_2:61286907-61286926 None:intergenic 35.0%
TACTGTAGCTGCAATATACA+TGG - chr3_2:61287060-61287079 Msa0415210:CDS 35.0%
ACATAACCCAGCGTTAAAAA+TGG - chr3_2:61287141-61287160 Msa0415210:CDS 35.0%
!!! TTCATGCCATTTTTAACGCT+GGG + chr3_2:61287150-61287169 None:intergenic 35.0%
AAAATGGCATGAACTCGAAT+TGG - chr3_2:61287157-61287176 Msa0415210:CDS 35.0%
AAATGGCATGAACTCGAATT+GGG - chr3_2:61287158-61287177 Msa0415210:CDS 35.0%
GTGCTTAAGATCACATATCA+CGG + chr3_2:61287222-61287241 None:intergenic 35.0%
!!! GATGCTGAGATTTTTTGTGG+TGG + chr3_2:61283328-61283347 None:intergenic 40.0%
! TTTTGTTGGAGCATGGAATG+CGG + chr3_2:61283508-61283527 None:intergenic 40.0%
CGAAAAGACGCAACGAAAAA+AGG + chr3_2:61283764-61283783 None:intergenic 40.0%
!! TACCTTCTGGTTTCAATGCT+TGG - chr3_2:61283840-61283859 Msa0415210:intron 40.0%
!! ATCCAAGCATTGAAACCAGA+AGG + chr3_2:61283845-61283864 None:intergenic 40.0%
! AAGCTTACATTTAGGGTCAG+AGG - chr3_2:61284334-61284353 Msa0415210:intron 40.0%
ACTAGAAATGGAGGAAACGT+TGG - chr3_2:61284423-61284442 Msa0415210:intron 40.0%
!! CTTATTTGGTGCACATTGGA+TGG - chr3_2:61284629-61284648 Msa0415210:CDS 40.0%
ATGGCTTAGAGGAAAAGTTG+GGG + chr3_2:61284693-61284712 None:intergenic 40.0%
GATGGCTTAGAGGAAAAGTT+GGG + chr3_2:61284694-61284713 None:intergenic 40.0%
!! CTTATTTGGTGCACATTGGA+TGG + chr3_2:61284629-61284648 None:intergenic 40.0%
TTACCTGCCCTATCATTTGA+TGG - chr3_2:61285351-61285370 Msa0415210:CDS 40.0%
TACCTGCCCTATCATTTGAT+GGG - chr3_2:61285352-61285371 Msa0415210:CDS 40.0%
GTTGCTCCCATCAAATGATA+GGG + chr3_2:61285361-61285380 None:intergenic 40.0%
AGTTGCTCCCATCAAATGAT+AGG + chr3_2:61285362-61285381 None:intergenic 40.0%
! CATGATAGGATCAGAGTACT+TGG + chr3_2:61285469-61285488 None:intergenic 40.0%
CAAGTACTCTGATCCTATCA+TGG - chr3_2:61285467-61285486 Msa0415210:intron 40.0%
TTGTAACGCAAAAAGGCTTG+AGG + chr3_2:61285671-61285690 None:intergenic 40.0%
AAGTGTGAATTTGGGTGTGT+TGG - chr3_2:61285722-61285741 Msa0415210:CDS 40.0%
TGAAAGGTCTCTCGTTGTTT+AGG - chr3_2:61285928-61285947 Msa0415210:intron 40.0%
TTGCAGCATATGGTTATTGG+TGG - chr3_2:61285995-61286014 Msa0415210:intron 40.0%
GTACAGTTCAACGGATGTAT+TGG - chr3_2:61286081-61286100 Msa0415210:intron 40.0%
TTCCAAAAATGGACGTGTAG+AGG + chr3_2:61286111-61286130 None:intergenic 40.0%
GCTAACAGCACTTCCAAAAA+TGG + chr3_2:61286122-61286141 None:intergenic 40.0%
!! TTTGGAAGTGCTGTTAGCTA+TGG - chr3_2:61286124-61286143 Msa0415210:intron 40.0%
TCACAGAAAGGAAAAGAGAG+AGG + chr3_2:61286196-61286215 None:intergenic 40.0%
! AAGGTGTCAGTTCAGTGTTA+AGG - chr3_2:61286253-61286272 Msa0415210:intron 40.0%
CTACATCCCTTAAGGTTACA+AGG + chr3_2:61286286-61286305 None:intergenic 40.0%
GATCTAGACTACATCCCTTA+AGG + chr3_2:61286294-61286313 None:intergenic 40.0%
GATGTAGTCTAGATCACCTT+GGG - chr3_2:61286299-61286318 Msa0415210:intron 40.0%
ATGTAGTCTAGATCACCTTG+GGG - chr3_2:61286300-61286319 Msa0415210:intron 40.0%
CCGAAAATTGAGGCAAACAT+TGG + chr3_2:61286614-61286633 None:intergenic 40.0%
TAACAATGGGAAAGAGTTGC+CGG - chr3_2:61286645-61286664 Msa0415210:intron 40.0%
TATTGCAGCTACAGTAACAC+TGG + chr3_2:61287056-61287075 None:intergenic 40.0%
!!! GTTCATGCCATTTTTAACGC+TGG + chr3_2:61287151-61287170 None:intergenic 40.0%
! ATTGGGAATGCTAGTGCTTT+TGG - chr3_2:61287175-61287194 Msa0415210:CDS 40.0%
! TAGTGCTTTTGGACATGTAG+AGG - chr3_2:61287186-61287205 Msa0415210:CDS 40.0%
CCTAGCGTAACAGTAATCTA+TGG + chr3_2:61287345-61287364 None:intergenic 40.0%
CCATAGATTACTGTTACGCT+AGG - chr3_2:61287342-61287361 Msa0415210:CDS 40.0%
TGTGAGAGGTGAAAGAGTAG+CGG + chr3_2:61283439-61283458 None:intergenic 45.0%
GTGGAAGAAGTTGGGAATTG+AGG + chr3_2:61283464-61283483 None:intergenic 45.0%
! ATGGAGTGGTGGAAGAAGTT+GGG + chr3_2:61283472-61283491 None:intergenic 45.0%
!!! TGATTTGCCGGTGGTTTTGT+TGG + chr3_2:61283522-61283541 None:intergenic 45.0%
!! GGTGGATTCTGTTGATTTGC+CGG + chr3_2:61283534-61283553 None:intergenic 45.0%
TTGGTAGATTGCGTAGGAAC+AGG - chr3_2:61283563-61283582 Msa0415210:three_prime_UTR 45.0%
TTCCTTCGTCTTCTTCGGTT+AGG + chr3_2:61283607-61283626 None:intergenic 45.0%
GCAGTTCCCCAAAAGAAGAA+CGG + chr3_2:61283704-61283723 None:intergenic 45.0%
!! CTTCTTTTGGGGAACTGCAA+TGG - chr3_2:61283706-61283725 Msa0415210:CDS 45.0%
!!! GTTGCTTTCGCTGCTTTTAG+AGG - chr3_2:61283809-61283828 Msa0415210:intron 45.0%
AGAGGAAGAGCTTTACCTTC+TGG - chr3_2:61283827-61283846 Msa0415210:intron 45.0%
TTTCAGGGGTTTCTTGCTGA+AGG - chr3_2:61283902-61283921 Msa0415210:intron 45.0%
TTCAGGGGTTTCTTGCTGAA+GGG - chr3_2:61283903-61283922 Msa0415210:intron 45.0%
! CAGAAGACTTCAGCTGGTTT+GGG - chr3_2:61283929-61283948 Msa0415210:intron 45.0%
! CTTACATTTAGGGTCAGAGG+TGG - chr3_2:61284337-61284356 Msa0415210:intron 45.0%
! TGTCCCACATCGACTAGAAA+TGG - chr3_2:61284411-61284430 Msa0415210:intron 45.0%
!! CCTCCATTTCTAGTCGATGT+GGG + chr3_2:61284417-61284436 None:intergenic 45.0%
!! TCCTCCATTTCTAGTCGATG+TGG + chr3_2:61284418-61284437 None:intergenic 45.0%
! GTGTGGTGTCTCTCTTTTAG+CGG - chr3_2:61284498-61284517 Msa0415210:intron 45.0%
! TGTGGTGTCTCTCTTTTAGC+GGG - chr3_2:61284499-61284518 Msa0415210:intron 45.0%
CAAACATGTTGGGGATTCTG+GGG + chr3_2:61284560-61284579 None:intergenic 45.0%
CCAAACATGTTGGGGATTCT+GGG + chr3_2:61284561-61284580 None:intergenic 45.0%
CCAGAATCCCCAACATGTTT+GGG - chr3_2:61284559-61284578 Msa0415210:intron 45.0%
!! GGGATTCATATTTGGTGCAC+CGG + chr3_2:61284673-61284692 None:intergenic 45.0%
GGATGGCTTAGAGGAAAAGT+TGG + chr3_2:61284695-61284714 None:intergenic 45.0%
AGAGGAAAAGTTGGGGATTC+TGG + chr3_2:61284686-61284705 None:intergenic 45.0%
ATCTGGCATGGATATATCGC+AGG - chr3_2:61284944-61284963 Msa0415210:intron 45.0%
TGATTCACAACCTTTGACGG+TGG - chr3_2:61284974-61284993 Msa0415210:intron 45.0%
!! CGTAGGACTTGTGTTACTTG+AGG - chr3_2:61285067-61285086 Msa0415210:intron 45.0%
TCTGATCCTATCATGGCAAC+TGG - chr3_2:61285474-61285493 Msa0415210:intron 45.0%
ATCCTATCATGGCAACTGGA+TGG - chr3_2:61285478-61285497 Msa0415210:intron 45.0%
TCCTATCATGGCAACTGGAT+GGG - chr3_2:61285479-61285498 Msa0415210:intron 45.0%
CAACTATGATCAGGGACTCA+GGG + chr3_2:61285763-61285782 None:intergenic 45.0%
! AAGAGGCATGGACATCTGAA+AGG - chr3_2:61285912-61285931 Msa0415210:intron 45.0%
CTCGTTGTTTAGGAACTCTC+TGG - chr3_2:61285938-61285957 Msa0415210:intron 45.0%
! TTAGGAACTCTCTGGAAGCT+TGG - chr3_2:61285946-61285965 Msa0415210:intron 45.0%
AAGAATCGCGAATGCCACAA+GGG + chr3_2:61286026-61286045 None:intergenic 45.0%
TAAGAATCGCGAATGCCACA+AGG + chr3_2:61286027-61286046 None:intergenic 45.0%
AACAATGAGCCTGCTGTAAG+TGG - chr3_2:61286046-61286065 Msa0415210:intron 45.0%
ACAATGAGCCTGCTGTAAGT+GGG - chr3_2:61286047-61286066 Msa0415210:intron 45.0%
TTAAGACTCCCACTTACAGC+AGG + chr3_2:61286058-61286077 None:intergenic 45.0%
! CTCCTCTACACGTCCATTTT+TGG - chr3_2:61286106-61286125 Msa0415210:intron 45.0%
GGATGTAGTCTAGATCACCT+TGG - chr3_2:61286298-61286317 Msa0415210:intron 45.0%
! CCATTTTACAACTGTCCCCA+AGG + chr3_2:61286318-61286337 None:intergenic 45.0%
CCTTGGGGACAGTTGTAAAA+TGG - chr3_2:61286315-61286334 Msa0415210:intron 45.0%
TTGTGCTTGTGATGCATTGC+AGG - chr3_2:61286551-61286570 Msa0415210:intron 45.0%
GCAGTCTTACCCGAAAATTG+AGG + chr3_2:61286624-61286643 None:intergenic 45.0%
GGGTAAGACTGCCTAACAAT+GGG - chr3_2:61286632-61286651 Msa0415210:intron 45.0%
GGCAACTCTTTCCCATTGTT+AGG + chr3_2:61286646-61286665 None:intergenic 45.0%
AACAATGGGAAAGAGTTGCC+GGG - chr3_2:61286646-61286665 Msa0415210:intron 45.0%
TTCTCACCTGTACAGCTTGT+TGG - chr3_2:61287028-61287047 Msa0415210:CDS 45.0%
! TCTCACCTGTACAGCTTGTT+GGG - chr3_2:61287029-61287048 Msa0415210:CDS 45.0%
AACTCCACTCACTTCCATCG+TGG - chr3_2:61283349-61283368 Msa0415210:three_prime_UTR 50.0%
! TGGGAATTGAGGAGTGTGAG+AGG + chr3_2:61283453-61283472 None:intergenic 50.0%
! GATGGAGTGGTGGAAGAAGT+TGG + chr3_2:61283473-61283492 None:intergenic 50.0%
GAAACGGAGAGAAGATGGAG+TGG + chr3_2:61283486-61283505 None:intergenic 50.0%
ATGCGGAAACGGAGAGAAGA+TGG + chr3_2:61283491-61283510 None:intergenic 50.0%
TGGAGCATGGAATGCGGAAA+CGG + chr3_2:61283502-61283521 None:intergenic 50.0%
CCATGCTCCAACAAAACCAC+CGG - chr3_2:61283512-61283531 Msa0415210:three_prime_UTR 50.0%
!! GGATTCTGTTGATTTGCCGG+TGG + chr3_2:61283531-61283550 None:intergenic 50.0%
GCAATCTACCAACTCGAGGT+CGG + chr3_2:61283555-61283574 None:intergenic 50.0%
CTACGCAATCTACCAACTCG+AGG + chr3_2:61283559-61283578 None:intergenic 50.0%
!! CTCGAGTTGGTAGATTGCGT+AGG - chr3_2:61283557-61283576 Msa0415210:three_prime_UTR 50.0%
CGTAGGAACAGGACAAGATG+TGG - chr3_2:61283574-61283593 Msa0415210:three_prime_UTR 50.0%
CTCCTAACCGAAGAAGACGA+AGG - chr3_2:61283602-61283621 Msa0415210:three_prime_UTR 50.0%
TCATCGAAGAGACTGTGCCT+TGG - chr3_2:61283644-61283663 Msa0415210:exon 50.0%
CATCGAAGAGACTGTGCCTT+GGG - chr3_2:61283645-61283664 Msa0415210:exon 50.0%
ATCGAAGAGACTGTGCCTTG+GGG - chr3_2:61283646-61283665 Msa0415210:exon 50.0%
!! CTTTTGGGGAACTGCAATGG+TGG - chr3_2:61283709-61283728 Msa0415210:CDS 50.0%
GCAACAAGAAGAAACCCAGC+TGG + chr3_2:61283794-61283813 None:intergenic 50.0%
! GTCGATGCTGCTTGCTTTCA+GGG - chr3_2:61283887-61283906 Msa0415210:intron 50.0%
! TCGATGCTGCTTGCTTTCAG+GGG - chr3_2:61283888-61283907 Msa0415210:intron 50.0%
GCAGAAGACTTCAGCTGGTT+TGG - chr3_2:61283928-61283947 Msa0415210:intron 50.0%
! CCCACATCGACTAGAAATGG+AGG - chr3_2:61284414-61284433 Msa0415210:intron 50.0%
CCCAGAATCCCCAACATGTT+TGG - chr3_2:61284558-61284577 Msa0415210:intron 50.0%
CCCAAACATGTTGGGGATTC+TGG + chr3_2:61284562-61284581 None:intergenic 50.0%
GTGCACATTGGATGGCTTAG+AGG + chr3_2:61284637-61284656 None:intergenic 50.0%
GGTGAGTCCATTGGAGTTGT+TGG - chr3_2:61285020-61285039 Msa0415210:intron 50.0%
ATTGGAGTTGTTGGAGCTGC+CGG - chr3_2:61285029-61285048 Msa0415210:intron 50.0%
CTCCCATCAAATGATAGGGC+AGG + chr3_2:61285357-61285376 None:intergenic 50.0%
ATGGGAGCAACTTCTCACTG+TGG - chr3_2:61285370-61285389 Msa0415210:CDS 50.0%
TGGGAGCAACTTCTCACTGT+GGG - chr3_2:61285371-61285390 Msa0415210:CDS 50.0%
AACTTCTCACTGTGGGGAAG+TGG - chr3_2:61285378-61285397 Msa0415210:CDS 50.0%
ACTTCTCACTGTGGGGAAGT+GGG - chr3_2:61285379-61285398 Msa0415210:CDS 50.0%
CAGTTGGCACTGTCATGGTT+CGG - chr3_2:61285436-61285455 Msa0415210:intron 50.0%
ACCCATCCAGTTGCCATGAT+AGG + chr3_2:61285483-61285502 None:intergenic 50.0%
GCAACTATGATCAGGGACTC+AGG + chr3_2:61285764-61285783 None:intergenic 50.0%
AGAATCGCGAATGCCACAAG+GGG + chr3_2:61286025-61286044 None:intergenic 50.0%
CGGGTAAGACTGCCTAACAA+TGG - chr3_2:61286631-61286650 Msa0415210:intron 50.0%
GAGGAAATGCCGGTGACAAA+AGG + chr3_2:61286897-61286916 None:intergenic 50.0%
!! CTCACCTGTACAGCTTGTTG+GGG - chr3_2:61287030-61287049 Msa0415210:CDS 50.0%
ATGGCCACGATGGAAGTGAG+TGG + chr3_2:61283356-61283375 None:intergenic 55.0%
AAGGGAGTGGAGTAGCACCA+CGG + chr3_2:61283386-61283405 None:intergenic 55.0%
AGAGGTGAAAGAGTAGCGGC+GGG + chr3_2:61283435-61283454 None:intergenic 55.0%
GAGAGGTGAAAGAGTAGCGG+CGG + chr3_2:61283436-61283455 None:intergenic 55.0%
ACGGAGAGAAGATGGAGTGG+TGG + chr3_2:61283483-61283502 None:intergenic 55.0%
!!! CCGGTGGTTTTGTTGGAGCA+TGG + chr3_2:61283515-61283534 None:intergenic 55.0%
AGAATCCACCGACCTCGAGT+TGG - chr3_2:61283544-61283563 Msa0415210:three_prime_UTR 55.0%
ATCTACCAACTCGAGGTCGG+TGG + chr3_2:61283552-61283571 None:intergenic 55.0%
!! TGTGCCTTGGGGAAGCGTTA+TGG - chr3_2:61283657-61283676 Msa0415210:exon 55.0%
!! GTGCCTTGGGGAAGCGTTAT+GGG - chr3_2:61283658-61283677 Msa0415210:exon 55.0%
CTTCCCATAACGCTTCCCCA+AGG + chr3_2:61283664-61283683 None:intergenic 55.0%
!! CTTGGGGAAGCGTTATGGGA+AGG - chr3_2:61283662-61283681 Msa0415210:CDS 55.0%
! CGTCGATGCTGCTTGCTTTC+AGG - chr3_2:61283886-61283905 Msa0415210:intron 55.0%
GGGTTGCAGAAGACTTCAGC+TGG - chr3_2:61283923-61283942 Msa0415210:intron 55.0%
!! CGGCAATGGGCTAAACGTCT+AGG + chr3_2:61284526-61284545 None:intergenic 55.0%
GCAAGTACAGCCACCGTCAA+AGG + chr3_2:61284987-61285006 None:intergenic 55.0%
GGCAGCTCCAACAACTCCAA+TGG + chr3_2:61285030-61285049 None:intergenic 55.0%
TTGGAGTTGTTGGAGCTGCC+GGG - chr3_2:61285030-61285049 Msa0415210:intron 55.0%
TACGACGCCAAGTACAAGCC+CGG + chr3_2:61285051-61285070 None:intergenic 55.0%
GGGAGCAACTTCTCACTGTG+GGG - chr3_2:61285372-61285391 Msa0415210:CDS 55.0%
CTTCTCACTGTGGGGAAGTG+GGG - chr3_2:61285380-61285399 Msa0415210:CDS 55.0%
GCTTCTTGCAGCTCAGAGCA+TGG - chr3_2:61285413-61285432 Msa0415210:intron 55.0%
CATGGCAGTTGGCACTGTCA+TGG - chr3_2:61285431-61285450 Msa0415210:intron 55.0%
! TTGGCACTGTCATGGTTCGG+TGG - chr3_2:61285439-61285458 Msa0415210:intron 55.0%
!! TGGCACTGTCATGGTTCGGT+GGG - chr3_2:61285440-61285459 Msa0415210:intron 55.0%
! TATTGGTGGTCTCCCCCTTG+TGG - chr3_2:61286009-61286028 Msa0415210:intron 55.0%
GAATCGCGAATGCCACAAGG+GGG + chr3_2:61286024-61286043 None:intergenic 55.0%
CAAGCCTCGTACTGCACAGA+TGG - chr3_2:61287298-61287317 Msa0415210:CDS 55.0%
TCTGCCATCTGTGCAGTACG+AGG + chr3_2:61287305-61287324 None:intergenic 55.0%
!! ATTCTGGGGAGCGCTTGGAG+CGG + chr3_2:61284546-61284565 None:intergenic 60.0%
GGGCTTGTACTTGGCGTCGT+AGG - chr3_2:61285050-61285069 Msa0415210:intron 60.0%
GCAGCTCAGAGCATGGCAGT+TGG - chr3_2:61285420-61285439 Msa0415210:intron 60.0%
CTGGCCCCAACAAGCTGTAC+AGG + chr3_2:61287037-61287056 None:intergenic 60.0%
GTAGCACCACGGCGACAGCA+TGG + chr3_2:61283375-61283394 None:intergenic 65.0%
! GTTGCGGTGACGGCGGTGAA+GGG + chr3_2:61283404-61283423 None:intergenic 65.0%
!! GGTGGTGGTGGTTGCGGTGA+CGG + chr3_2:61283414-61283433 None:intergenic 65.0%
GAAAGAGTAGCGGCGGGTGG+TGG + chr3_2:61283429-61283448 None:intergenic 65.0%
GGTGAAAGAGTAGCGGCGGG+TGG + chr3_2:61283432-61283451 None:intergenic 65.0%
! GGAGCGCTTGGAGCGGCAAT+GGG + chr3_2:61284539-61284558 None:intergenic 65.0%
!! TGGGGATTCTGGGGAGCGCT+TGG + chr3_2:61284551-61284570 None:intergenic 65.0%
GGAGCTGCCGGGCTTGTACT+TGG - chr3_2:61285041-61285060 Msa0415210:intron 65.0%
CACTGTGGGGAAGTGGGGAG+TGG - chr3_2:61285385-61285404 Msa0415210:CDS 65.0%
TGTGGGGAAGTGGGGAGTGG+TGG - chr3_2:61285388-61285407 Msa0415210:CDS 65.0%
CGGCGACAGCATGGCCACGA+TGG + chr3_2:61283366-61283385 None:intergenic 70.0%
TCGTGGCCATGCTGTCGCCG+TGG - chr3_2:61283366-61283385 Msa0415210:three_prime_UTR 70.0%
! GGTGACGGCGGTGAAGGGAG+TGG + chr3_2:61283399-61283418 None:intergenic 70.0%
! GGTTGCGGTGACGGCGGTGA+AGG + chr3_2:61283405-61283424 None:intergenic 70.0%
! GGTGGTGGTTGCGGTGACGG+CGG + chr3_2:61283411-61283430 None:intergenic 70.0%
! AGAGTAGCGGCGGGTGGTGG+TGG + chr3_2:61283426-61283445 None:intergenic 70.0%
!! GGGAGCGCTTGGAGCGGCAA+TGG + chr3_2:61284540-61284559 None:intergenic 70.0%
!! GCGGCGGGTGGTGGTGGTTG+CGG + chr3_2:61283420-61283439 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 61283285 61287484 61283285 ID=Msa0415210;Name=Msa0415210
chr3_2 mRNA 61283285 61287484 61283285 ID=Msa0415210-mRNA-1;Parent=Msa0415210;Name=Msa0415210-mRNA-1;_AED=0.31;_eAED=0.31;_QI=89|1|1|1|1|1|6|376|396
chr3_2 exon 61283285 61283763 61283285 ID=Msa0415210-mRNA-1:exon:12957;Parent=Msa0415210-mRNA-1
chr3_2 exon 61284136 61284196 61284136 ID=Msa0415210-mRNA-1:exon:12956;Parent=Msa0415210-mRNA-1
chr3_2 exon 61284597 61284768 61284597 ID=Msa0415210-mRNA-1:exon:12955;Parent=Msa0415210-mRNA-1
chr3_2 exon 61285269 61285418 61285269 ID=Msa0415210-mRNA-1:exon:12954;Parent=Msa0415210-mRNA-1
chr3_2 exon 61285681 61285803 61285681 ID=Msa0415210-mRNA-1:exon:12953;Parent=Msa0415210-mRNA-1
chr3_2 exon 61286814 61287484 61286814 ID=Msa0415210-mRNA-1:exon:12952;Parent=Msa0415210-mRNA-1
chr3_2 five_prime_UTR 61287396 61287484 61287396 ID=Msa0415210-mRNA-1:five_prime_utr;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61286814 61287395 61286814 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61285681 61285803 61285681 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61285269 61285418 61285269 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61284597 61284768 61284597 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61284136 61284196 61284136 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 CDS 61283661 61283763 61283661 ID=Msa0415210-mRNA-1:cds;Parent=Msa0415210-mRNA-1
chr3_2 three_prime_UTR 61283285 61283660 61283285 ID=Msa0415210-mRNA-1:three_prime_utr;Parent=Msa0415210-mRNA-1
Gene Sequence

>Msa0415210

ATGCTGTCGCCGTGGTGCTACTCCACTCCCTTCACCGCCGTCACCGCAACCACCACCACCCGCCGCTACTCTTTCACCTCTCACACTCCTCAATTCCCAACTTCTTCCACCACTCCATCTTCTCTCCGTTTCCGCATTCCATGCTCCAACAAAACCACCGGCAAATCAACAGAATCCACCGACCTCGAGTTGGTAGATTGCGTAGGAACAGGACAAGATGTGGAGTGTCTCCTAACCGAAGAAGACGAAGGAAAAACAAAAGATGAATCATCATCGAAGAGACTGTGCCTTGGGGAAGCGTTATGGGAAGGTGCAGTGTTAATATCACCGTTCTTCTTTTGGGGAACTGCAATGGTGGCGATGAAAGAAGTGATTCCTAATTACGGTCCTTTTTTCGTTGCGTCTTTTCGTTTAATTCCAGCTGGGTTTCTTCTTGTTGCTTTCGCTGCTTTTAGAGGAAGAGCTTTACCTTCTGGTTTCAATGCTTGGATTTCTATCGCAATATTCGCACTCGTCGATGCTGCTTGCTTTCAGGGGTTTCTTGCTGAAGGGTTGCAGAAGACTTCAGCTGGTTTGGGCAGTGTTATTATTGATTCACAACCTTTGACGGTGGCTGTACTTGCTGCTTTGTTATTTGGTGAGTCCATTGGAGTTGTTGGAGCTGCCGGGCTTGTACTTGGCGTCGTAGGACTTGTGTTACTTGAGTTACCTGCCCTATCATTTGATGGGAGCAACTTCTCACTGTGGGGAAGTGGGGAGTGGTGGATGCTTCTTGCAGCTCAGAGCATGGCAGTTGGCACTGTCATGGTTCGGTGGGTCTCCAAGTACTCTGATCCTATCATGGCAACTGGATGGCATATGGTTATTGGTGGTCTCCCCCTTGTGGCATTCGCGATTCTTAACAATGAGCCTGCTGTAAGTGGGAGTCTTAAAGAGTACAGTTCAACGGATGTATTGGCACTCCTCTACACGTCCATTTTTGGAAGTGCTGTTAGCTATGGTGTGTTCTTTTACAGTGCAACTAAAGGTAGCTTGACAAAGCTCAGTTCACTTACATTTCTAACCCCAATGTTTGCCTCAATTTTCGGGTTTTTGTATCTCGGTGAGACATTCTCACCTGTACAGCTTGTTGGGGCCAGTGTTACTGTAGCTGCAATATACATGGTTAACTTCAGAAACACTTCAGAATGA

Protein sequence

>Msa0415210

MLSPWCYSTPFTAVTATTTTRRYSFTSHTPQFPTSSTTPSSLRFRIPCSNKTTGKSTESTDLELVDCVGTGQDVECLLTEEDEGKTKDESSSKRLCLGEALWEGAVLISPFFFWGTAMVAMKEVIPNYGPFFVASFRLIPAGFLLVAFAAFRGRALPSGFNAWISIAIFALVDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVVGLVLLELPALSFDGSNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVAFAILNNEPAVSGSLKEYSSTDVLALLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLVGASVTVAAIYMVNFRNTSE*