Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40701.t1 | XP_003603642.2 | 97 | 471 | 14 | 0 | 1 | 471 | 1 | 471 | 2.80E-259 | 904 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40701.t1 | Q42400 | 53.5 | 454 | 210 | 1 | 15 | 467 | 27 | 480 | 7.8e-141 | 501.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40701.t1 | G7J3I6 | 97.0 | 471 | 14 | 0 | 1 | 471 | 1 | 471 | 2.0e-259 | 904.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene40701 | 0.835667 | 1.47E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene40701 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene40701 | 0.855846 | 4.79E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene40701 | 0.840321 | 9.33E-58 | -1.69E-46 |
| MS.gene049232 | MS.gene40701 | 0.845965 | 2.92E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene40701 | 0.861805 | 7.92E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene40701 | 0.864824 | 9.21E-65 | -1.69E-46 |
| MS.gene049369 | MS.gene40701 | 0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene40701 | 0.8387 | 2.46E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene40701 | 0.851375 | 9.25E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene40701 | 0.814074 | 1.85E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene40701 | 0.85123 | 1.02E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene40701 | 0.843778 | 1.14E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene40701 | 0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene40701 | 0.801369 | 9.30E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene40701 | 0.815709 | 8.05E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene40701 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene40701 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene40701 | 0.805393 | 1.36E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene40701 | 0.847402 | 1.18E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene40701 | 0.836097 | 1.14E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene40701 | 0.84365 | 1.23E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene40701 | 0.833495 | 5.16E-56 | -1.69E-46 |
| MS.gene050662 | MS.gene40701 | 0.839447 | 1.58E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene40701 | 0.833104 | 6.46E-56 | -1.69E-46 |
| MS.gene050686 | MS.gene40701 | 0.841973 | 3.43E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene40701 | 0.832609 | 8.57E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene40701 | 0.823007 | 1.75E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene40701 | 0.87835 | 3.02E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene40701 | 0.817752 | 2.80E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene40701 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene40701 | 0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene40701 | 0.815298 | 9.93E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene40701 | 0.838526 | 2.73E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene40701 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene40701 | 0.820874 | 5.45E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene40701 | 0.83951 | 1.52E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene40701 | 0.850796 | 1.35E-60 | -1.69E-46 |
| MS.gene051666 | MS.gene40701 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene40701 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene40701 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene40701 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene40701 | 0.835811 | 1.35E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene40701 | 0.823684 | 1.21E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene40701 | 0.83755 | 4.87E-57 | -1.69E-46 |
| MS.gene052379 | MS.gene40701 | 0.822733 | 2.02E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene40701 | 0.823123 | 1.64E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene40701 | 0.802829 | 4.66E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene40701 | 0.807494 | 4.92E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene40701 | 0.813236 | 2.83E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene40701 | 0.814452 | 1.53E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene40701 | 0.80279 | 4.75E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene40701 | 0.837305 | 5.62E-57 | -1.69E-46 |
| MS.gene052506 | MS.gene40701 | 0.82068 | 6.04E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene40701 | 0.843269 | 1.55E-58 | -1.69E-46 |
| MS.gene052822 | MS.gene40701 | 0.816753 | 4.70E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene40701 | 0.832488 | 9.19E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene40701 | 0.821334 | 4.27E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene40701 | 0.813798 | 2.13E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene40701 | 0.813794 | 2.14E-51 | -1.69E-46 |
| MS.gene053018 | MS.gene40701 | 0.828285 | 9.79E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene40701 | 0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene40701 | 0.833169 | 6.22E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene40701 | 0.822512 | 2.28E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene40701 | 0.834868 | 2.34E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene40701 | 0.879843 | 8.95E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene40701 | 0.874858 | 4.86E-68 | -1.69E-46 |
| MS.gene053322 | MS.gene40701 | 0.832347 | 9.95E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene40701 | 0.828529 | 8.55E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene40701 | 0.823625 | 1.25E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene40701 | 0.881654 | 2.00E-70 | -1.69E-46 |
| MS.gene053626 | MS.gene40701 | 0.845259 | 4.54E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene40701 | 0.840106 | 1.06E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene40701 | 0.83332 | 5.71E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene40701 | 0.818796 | 1.63E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene40701 | 0.843253 | 1.57E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene40701 | 0.866272 | 3.22E-65 | -1.69E-46 |
| MS.gene054595 | MS.gene40701 | 0.860877 | 1.52E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene40701 | 0.836968 | 6.85E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene40701 | 0.874431 | 6.79E-68 | -1.69E-46 |
| MS.gene054927 | MS.gene40701 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene40701 | 0.848321 | 6.61E-60 | -1.69E-46 |
| MS.gene05505 | MS.gene40701 | 0.859458 | 4.08E-63 | -1.69E-46 |
| MS.gene055206 | MS.gene40701 | 0.83116 | 1.95E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene40701 | 0.800257 | 1.57E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene40701 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene40701 | 0.828924 | 6.86E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene40701 | 0.862469 | 4.96E-64 | -1.69E-46 |
| MS.gene055499 | MS.gene40701 | 0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene40701 | 0.851675 | 7.60E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene40701 | 0.823517 | 1.33E-53 | -1.69E-46 |
| MS.gene055636 | MS.gene40701 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene40701 | 0.854849 | 9.36E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene40701 | 0.891639 | 3.31E-74 | -1.69E-46 |
| MS.gene05592 | MS.gene40701 | 0.865475 | 5.75E-65 | -1.69E-46 |
| MS.gene055941 | MS.gene40701 | 0.849615 | 2.89E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene40701 | 0.820561 | 6.43E-53 | -1.69E-46 |
| MS.gene056166 | MS.gene40701 | 0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene40701 | 0.879768 | 9.52E-70 | -1.69E-46 |
| MS.gene056422 | MS.gene40701 | 0.857227 | 1.88E-62 | -1.69E-46 |
| MS.gene056448 | MS.gene40701 | 0.854444 | 1.23E-61 | -1.69E-46 |
| MS.gene056487 | MS.gene40701 | 0.801478 | 8.83E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene40701 | 0.831206 | 1.90E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene40701 | 0.851025 | 1.16E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene40701 | 0.820764 | 5.77E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene40701 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene40701 | 0.862091 | 6.48E-64 | -1.69E-46 |
| MS.gene056878 | MS.gene40701 | 0.834913 | 2.28E-56 | -1.69E-46 |
| MS.gene056942 | MS.gene40701 | 0.804654 | 1.95E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene40701 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene40701 | 0.847718 | 9.69E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene40701 | 0.832128 | 1.13E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene40701 | 0.832258 | 1.05E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene40701 | 0.828417 | 9.10E-55 | -1.69E-46 |
| MS.gene057285 | MS.gene40701 | 0.805664 | 1.20E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene40701 | 0.845648 | 3.56E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene40701 | 0.882608 | 9.03E-71 | -1.69E-46 |
| MS.gene057734 | MS.gene40701 | 0.824766 | 6.76E-54 | -1.69E-46 |
| MS.gene057856 | MS.gene40701 | 0.831465 | 1.64E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene40701 | 0.842766 | 2.12E-58 | -1.69E-46 |
| MS.gene058006 | MS.gene40701 | 0.806427 | 8.27E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene40701 | 0.826564 | 2.53E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene40701 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene40701 | 0.805284 | 1.44E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene40701 | 0.818697 | 1.71E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene40701 | 0.875288 | 3.47E-68 | -1.69E-46 |
| MS.gene058459 | MS.gene40701 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene40701 | 0.812566 | 3.98E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene40701 | 0.829239 | 5.75E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene40701 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene058840 | MS.gene40701 | -0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene40701 | 0.843415 | 1.42E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene40701 | 0.802263 | 6.10E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene40701 | 0.816251 | 6.09E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene40701 | 0.847624 | 1.03E-59 | -1.69E-46 |
| MS.gene059305 | MS.gene40701 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene40701 | 0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene40701 | 0.848969 | 4.37E-60 | -1.69E-46 |
| MS.gene059368 | MS.gene40701 | 0.841249 | 5.33E-58 | -1.69E-46 |
| MS.gene059455 | MS.gene40701 | 0.810118 | 1.35E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene40701 | 0.819831 | 9.45E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene40701 | 0.830589 | 2.70E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene40701 | 0.83236 | 9.88E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene40701 | 0.854157 | 1.48E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene40701 | 0.846026 | 2.81E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene40701 | 0.837682 | 4.50E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene40701 | 0.874667 | 5.64E-68 | -1.69E-46 |
| MS.gene060703 | MS.gene40701 | 0.816087 | 6.63E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene40701 | 0.815511 | 8.91E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene40701 | 0.821807 | 3.32E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene40701 | 0.835944 | 1.25E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene40701 | 0.845152 | 4.85E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene40701 | 0.838701 | 2.46E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene40701 | 0.827856 | 1.24E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene40701 | 0.862516 | 4.79E-64 | -1.69E-46 |
| MS.gene06092 | MS.gene40701 | 0.828277 | 9.83E-55 | -1.69E-46 |
| MS.gene06097 | MS.gene40701 | 0.806341 | 8.62E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene40701 | 0.809681 | 1.68E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene40701 | 0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene40701 | 0.862494 | 4.87E-64 | -1.69E-46 |
| MS.gene061150 | MS.gene40701 | 0.812631 | 3.85E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene40701 | 0.838544 | 2.70E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40701.t1 | MTR_3g110420 | 97.028 | 471 | 14 | 0 | 1 | 471 | 1 | 471 | 0.0 | 939 |
| MS.gene40701.t1 | MTR_1g007180 | 68.996 | 458 | 140 | 1 | 14 | 471 | 2 | 457 | 0.0 | 681 |
| MS.gene40701.t1 | MTR_2g031750 | 68.202 | 456 | 143 | 1 | 16 | 471 | 4 | 457 | 0.0 | 672 |
| MS.gene40701.t1 | MTR_3g110420 | 96.697 | 333 | 11 | 0 | 1 | 333 | 1 | 333 | 0.0 | 660 |
| MS.gene40701.t1 | MTR_1g007240 | 67.467 | 458 | 147 | 1 | 14 | 471 | 2 | 457 | 0.0 | 656 |
| MS.gene40701.t1 | MTR_2g031750 | 66.495 | 388 | 128 | 1 | 84 | 471 | 5 | 390 | 0.0 | 562 |
| MS.gene40701.t1 | MTR_1g007270 | 57.113 | 471 | 193 | 4 | 2 | 470 | 9 | 472 | 0.0 | 553 |
| MS.gene40701.t1 | MTR_3g110430 | 56.182 | 461 | 200 | 1 | 10 | 470 | 47 | 505 | 0.0 | 520 |
| MS.gene40701.t1 | MTR_3g110660 | 52.391 | 460 | 217 | 2 | 14 | 471 | 23 | 482 | 0.0 | 516 |
| MS.gene40701.t1 | MTR_1g007380 | 51.193 | 461 | 223 | 2 | 13 | 471 | 12 | 472 | 8.10e-179 | 509 |
| MS.gene40701.t1 | MTR_1g105980 | 52.735 | 457 | 214 | 2 | 13 | 467 | 11 | 467 | 2.42e-175 | 500 |
| MS.gene40701.t1 | MTR_8g094290 | 52.772 | 451 | 208 | 3 | 18 | 467 | 25 | 471 | 7.17e-173 | 494 |
| MS.gene40701.t1 | MTR_1g105995 | 52.632 | 456 | 214 | 2 | 14 | 467 | 11 | 466 | 1.83e-171 | 490 |
| MS.gene40701.t1 | MTR_1g106000 | 51.974 | 456 | 208 | 3 | 23 | 467 | 14 | 469 | 1.67e-168 | 483 |
| MS.gene40701.t1 | MTR_4g073520 | 49.467 | 469 | 231 | 2 | 5 | 467 | 40 | 508 | 1.88e-168 | 484 |
| MS.gene40701.t1 | MTR_4g073520 | 49.467 | 469 | 231 | 2 | 5 | 467 | 40 | 508 | 2.60e-168 | 484 |
| MS.gene40701.t1 | MTR_3g088455 | 49.028 | 463 | 231 | 3 | 7 | 467 | 16 | 475 | 2.90e-166 | 478 |
| MS.gene40701.t1 | MTR_3g088475 | 48.707 | 464 | 232 | 4 | 7 | 467 | 16 | 476 | 1.10e-163 | 471 |
| MS.gene40701.t1 | MTR_1g105990 | 51.168 | 471 | 222 | 4 | 1 | 466 | 1 | 468 | 1.98e-163 | 470 |
| MS.gene40701.t1 | MTR_1g029750 | 50.108 | 463 | 228 | 2 | 7 | 467 | 18 | 479 | 8.02e-163 | 469 |
| MS.gene40701.t1 | MTR_3g096800 | 47.403 | 462 | 232 | 4 | 10 | 467 | 19 | 473 | 1.18e-156 | 453 |
| MS.gene40701.t1 | MTR_1g007180 | 66.885 | 305 | 99 | 1 | 167 | 471 | 71 | 373 | 4.74e-153 | 440 |
| MS.gene40701.t1 | MTR_3g096830 | 50.000 | 470 | 226 | 6 | 1 | 467 | 1 | 464 | 1.29e-152 | 442 |
| MS.gene40701.t1 | MTR_3g096840 | 46.667 | 465 | 242 | 4 | 4 | 467 | 20 | 479 | 9.62e-151 | 438 |
| MS.gene40701.t1 | MTR_3g061390 | 45.805 | 441 | 235 | 2 | 18 | 457 | 17 | 454 | 3.34e-145 | 423 |
| MS.gene40701.t1 | MTR_3g461440 | 44.105 | 458 | 251 | 3 | 1 | 457 | 1 | 454 | 2.12e-144 | 421 |
| MS.gene40701.t1 | MTR_3g461470 | 43.384 | 461 | 256 | 3 | 1 | 460 | 1 | 457 | 5.26e-142 | 415 |
| MS.gene40701.t1 | MTR_3g461430 | 45.890 | 438 | 233 | 2 | 21 | 457 | 27 | 461 | 1.91e-141 | 416 |
| MS.gene40701.t1 | MTR_5g096840 | 44.749 | 438 | 235 | 4 | 23 | 457 | 28 | 461 | 2.42e-136 | 401 |
| MS.gene40701.t1 | MTR_3g110660 | 56.250 | 320 | 139 | 1 | 14 | 332 | 23 | 342 | 4.59e-130 | 382 |
| MS.gene40701.t1 | MTR_3g461480 | 41.485 | 458 | 263 | 3 | 2 | 457 | 5 | 459 | 1.17e-123 | 369 |
| MS.gene40701.t1 | MTR_3g088465 | 45.845 | 373 | 194 | 5 | 7 | 375 | 16 | 384 | 5.18e-118 | 352 |
| MS.gene40701.t1 | MTR_5g096850 | 39.359 | 437 | 260 | 3 | 23 | 457 | 24 | 457 | 6.52e-109 | 330 |
| MS.gene40701.t1 | MTR_3g461440 | 44.304 | 316 | 172 | 2 | 143 | 457 | 5 | 317 | 4.76e-99 | 300 |
| MS.gene40701.t1 | MTR_5g017200 | 51.351 | 259 | 108 | 4 | 13 | 268 | 21 | 264 | 5.59e-78 | 244 |
| MS.gene40701.t1 | MTR_1g007190 | 48.416 | 221 | 76 | 6 | 34 | 254 | 20 | 202 | 7.38e-55 | 182 |
| MS.gene40701.t1 | MTR_6g022790 | 25.586 | 469 | 310 | 12 | 4 | 467 | 20 | 454 | 4.40e-41 | 152 |
| MS.gene40701.t1 | MTR_2g101920 | 27.045 | 440 | 275 | 15 | 2 | 432 | 23 | 425 | 2.03e-38 | 145 |
| MS.gene40701.t1 | MTR_4g103890 | 27.295 | 414 | 262 | 9 | 24 | 433 | 10 | 388 | 2.56e-38 | 144 |
| MS.gene40701.t1 | MTR_8g080120 | 25.949 | 474 | 305 | 13 | 1 | 467 | 1 | 435 | 2.31e-37 | 142 |
| MS.gene40701.t1 | MTR_1g070470 | 25.751 | 466 | 305 | 13 | 10 | 467 | 5 | 437 | 1.14e-36 | 140 |
| MS.gene40701.t1 | MTR_3g005740 | 27.740 | 447 | 290 | 9 | 24 | 467 | 52 | 468 | 8.55e-35 | 135 |
| MS.gene40701.t1 | MTR_4g055610 | 27.803 | 446 | 266 | 15 | 3 | 425 | 10 | 422 | 2.40e-33 | 131 |
| MS.gene40701.t1 | MTR_5g054730 | 27.468 | 466 | 290 | 12 | 13 | 467 | 10 | 438 | 1.37e-32 | 129 |
| MS.gene40701.t1 | MTR_1g093030 | 26.724 | 464 | 300 | 12 | 8 | 467 | 9 | 436 | 4.52e-31 | 124 |
| MS.gene40701.t1 | MTR_3g085820 | 26.705 | 352 | 224 | 9 | 6 | 342 | 4 | 336 | 1.07e-29 | 120 |
| MS.gene40701.t1 | MTR_2g096830 | 25.895 | 475 | 292 | 11 | 4 | 467 | 2 | 427 | 2.21e-29 | 119 |
| MS.gene40701.t1 | MTR_1g093020 | 25.581 | 473 | 309 | 12 | 1 | 467 | 1 | 436 | 4.52e-29 | 119 |
| MS.gene40701.t1 | MTR_6g022780 | 26.022 | 465 | 292 | 11 | 14 | 467 | 4 | 427 | 1.07e-28 | 117 |
| MS.gene40701.t1 | MTR_1g093020 | 26.484 | 438 | 279 | 12 | 1 | 432 | 1 | 401 | 2.75e-28 | 116 |
| MS.gene40701.t1 | MTR_2g096830 | 27.666 | 347 | 212 | 9 | 4 | 342 | 2 | 317 | 3.81e-28 | 114 |
| MS.gene40701.t1 | MTR_6g023075 | 25.586 | 469 | 294 | 12 | 10 | 467 | 3 | 427 | 5.89e-27 | 112 |
| MS.gene40701.t1 | MTR_7g038910 | 25.882 | 340 | 225 | 10 | 10 | 342 | 14 | 333 | 2.07e-26 | 110 |
| MS.gene40701.t1 | MTR_7g038910 | 24.946 | 465 | 306 | 13 | 10 | 467 | 14 | 442 | 2.52e-26 | 111 |
| MS.gene40701.t1 | MTR_7g038910 | 25.882 | 340 | 225 | 10 | 10 | 342 | 14 | 333 | 4.22e-26 | 109 |
| MS.gene40701.t1 | MTR_1g492640 | 24.160 | 476 | 321 | 14 | 2 | 467 | 33 | 478 | 8.25e-26 | 110 |
| MS.gene40701.t1 | MTR_3g115090 | 24.890 | 454 | 302 | 11 | 15 | 457 | 73 | 498 | 1.18e-25 | 110 |
| MS.gene40701.t1 | MTR_6g023065 | 24.009 | 454 | 294 | 11 | 24 | 467 | 50 | 462 | 3.04e-25 | 108 |
| MS.gene40701.t1 | MTR_4g075750 | 27.692 | 455 | 279 | 15 | 24 | 460 | 70 | 492 | 2.22e-23 | 103 |
| MS.gene40701.t1 | MTR_8g099320 | 23.126 | 467 | 321 | 11 | 10 | 467 | 10 | 447 | 4.52e-23 | 102 |
| MS.gene40701.t1 | MTR_0531s0020 | 24.713 | 348 | 224 | 9 | 13 | 343 | 27 | 353 | 1.77e-22 | 99.0 |
| MS.gene40701.t1 | MTR_1g492640 | 23.782 | 349 | 239 | 11 | 2 | 340 | 15 | 346 | 4.69e-18 | 85.9 |
| MS.gene40701.t1 | MTR_1g492640 | 23.782 | 349 | 239 | 11 | 2 | 340 | 33 | 364 | 5.70e-18 | 85.9 |
| MS.gene40701.t1 | MTR_1g492640 | 24.309 | 362 | 240 | 11 | 111 | 467 | 14 | 346 | 7.84e-14 | 73.2 |
| MS.gene40701.t1 | MTR_2g012470 | 22.414 | 464 | 299 | 13 | 24 | 467 | 95 | 517 | 1.37e-13 | 73.2 |
| MS.gene40701.t1 | MTR_5g023240 | 22.926 | 458 | 311 | 14 | 24 | 470 | 86 | 512 | 1.81e-13 | 72.8 |
| MS.gene40701.t1 | MTR_5g081630 | 21.635 | 416 | 284 | 11 | 55 | 467 | 4 | 380 | 4.26e-13 | 71.2 |
| MS.gene40701.t1 | MTR_1g492640 | 24.201 | 219 | 150 | 6 | 2 | 215 | 15 | 222 | 1.62e-11 | 65.1 |
| MS.gene40701.t1 | MTR_1g492640 | 24.201 | 219 | 150 | 6 | 2 | 215 | 33 | 240 | 2.51e-11 | 64.7 |
| MS.gene40701.t1 | MTR_4g104510 | 22.274 | 431 | 261 | 14 | 55 | 467 | 71 | 445 | 5.00e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40701.t1 | AT1G10010 | 53.084 | 454 | 212 | 1 | 15 | 467 | 18 | 471 | 0.0 | 533 |
| MS.gene40701.t1 | AT1G10010 | 53.084 | 454 | 212 | 1 | 15 | 467 | 19 | 472 | 0.0 | 533 |
| MS.gene40701.t1 | AT1G58360 | 53.407 | 455 | 211 | 1 | 14 | 467 | 26 | 480 | 0.0 | 523 |
| MS.gene40701.t1 | AT5G49630 | 52.401 | 479 | 215 | 5 | 1 | 467 | 1 | 478 | 1.34e-179 | 511 |
| MS.gene40701.t1 | AT5G09220 | 50.885 | 452 | 219 | 2 | 18 | 467 | 39 | 489 | 1.09e-169 | 487 |
| MS.gene40701.t1 | AT5G63850 | 50.221 | 452 | 222 | 2 | 18 | 467 | 12 | 462 | 1.17e-164 | 473 |
| MS.gene40701.t1 | AT1G44100 | 48.614 | 469 | 227 | 3 | 9 | 467 | 12 | 476 | 2.38e-164 | 473 |
| MS.gene40701.t1 | AT1G77380 | 49.451 | 455 | 228 | 2 | 14 | 467 | 19 | 472 | 2.13e-160 | 462 |
| MS.gene40701.t1 | AT5G23810 | 44.820 | 444 | 236 | 4 | 20 | 457 | 21 | 461 | 2.93e-124 | 370 |
| MS.gene40701.t1 | AT5G23810 | 46.789 | 327 | 168 | 3 | 20 | 343 | 21 | 344 | 2.03e-96 | 295 |
| MS.gene40701.t1 | AT5G23810 | 44.118 | 238 | 127 | 3 | 20 | 254 | 21 | 255 | 3.16e-60 | 198 |
| MS.gene40701.t1 | AT5G23810 | 48.168 | 191 | 96 | 2 | 20 | 207 | 21 | 211 | 8.66e-53 | 177 |
| MS.gene40701.t1 | AT5G23810 | 48.168 | 191 | 96 | 2 | 20 | 207 | 21 | 211 | 8.66e-53 | 177 |
| MS.gene40701.t1 | AT1G24400 | 26.850 | 473 | 302 | 11 | 1 | 467 | 6 | 440 | 1.92e-40 | 150 |
| MS.gene40701.t1 | AT5G40780 | 24.947 | 473 | 309 | 13 | 2 | 467 | 12 | 445 | 3.55e-37 | 142 |
| MS.gene40701.t1 | AT1G61270 | 27.527 | 465 | 290 | 11 | 5 | 454 | 2 | 434 | 5.67e-37 | 141 |
| MS.gene40701.t1 | AT1G48640 | 27.039 | 466 | 287 | 14 | 14 | 467 | 28 | 452 | 1.03e-36 | 140 |
| MS.gene40701.t1 | AT1G67640 | 26.415 | 477 | 304 | 11 | 1 | 467 | 1 | 440 | 1.17e-35 | 137 |
| MS.gene40701.t1 | AT3G01760 | 27.865 | 445 | 283 | 12 | 24 | 463 | 31 | 442 | 1.27e-35 | 137 |
| MS.gene40701.t1 | AT5G40780 | 25.173 | 433 | 283 | 11 | 40 | 467 | 1 | 397 | 7.92e-35 | 134 |
| MS.gene40701.t1 | AT5G40780 | 25.173 | 433 | 283 | 11 | 40 | 467 | 1 | 397 | 7.92e-35 | 134 |
| MS.gene40701.t1 | AT1G71680 | 26.598 | 485 | 292 | 13 | 2 | 467 | 8 | 447 | 9.31e-35 | 135 |
| MS.gene40701.t1 | AT1G71680 | 28.375 | 363 | 206 | 11 | 2 | 342 | 8 | 338 | 5.62e-32 | 125 |
| MS.gene40701.t1 | AT1G25530 | 27.679 | 448 | 285 | 12 | 24 | 467 | 27 | 439 | 1.65e-30 | 123 |
| MS.gene40701.t1 | AT1G08230 | 25.466 | 483 | 309 | 16 | 1 | 467 | 1 | 448 | 1.70e-25 | 108 |
| MS.gene40701.t1 | AT5G41800 | 23.348 | 454 | 307 | 11 | 23 | 467 | 25 | 446 | 5.28e-21 | 95.9 |
| MS.gene40701.t1 | AT3G55740 | 22.749 | 422 | 272 | 12 | 55 | 467 | 60 | 436 | 6.37e-16 | 80.1 |
| MS.gene40701.t1 | AT1G08230 | 26.875 | 320 | 195 | 11 | 160 | 467 | 56 | 348 | 9.48e-16 | 79.0 |
| MS.gene40701.t1 | AT3G55740 | 22.749 | 422 | 272 | 12 | 55 | 467 | 4 | 380 | 1.06e-15 | 79.0 |
| MS.gene40701.t1 | AT3G55740 | 22.749 | 422 | 272 | 12 | 55 | 467 | 4 | 380 | 1.06e-15 | 79.0 |
| MS.gene40701.t1 | AT1G08230 | 26.875 | 320 | 195 | 11 | 160 | 467 | 37 | 329 | 1.26e-15 | 78.2 |
| MS.gene40701.t1 | AT1G08230 | 26.875 | 320 | 195 | 11 | 160 | 467 | 37 | 329 | 1.26e-15 | 78.2 |
| MS.gene40701.t1 | AT1G08230 | 26.875 | 320 | 195 | 11 | 160 | 467 | 37 | 329 | 1.26e-15 | 78.2 |
| MS.gene40701.t1 | AT2G39890 | 23.741 | 417 | 274 | 14 | 55 | 467 | 63 | 439 | 1.60e-15 | 79.0 |
| MS.gene40701.t1 | AT2G39890 | 23.741 | 417 | 274 | 14 | 55 | 467 | 63 | 439 | 1.60e-15 | 79.0 |
| MS.gene40701.t1 | AT2G39890 | 23.741 | 417 | 274 | 14 | 55 | 467 | 4 | 380 | 2.81e-15 | 77.8 |
| MS.gene40701.t1 | AT2G36590 | 22.043 | 372 | 250 | 10 | 55 | 424 | 57 | 390 | 3.01e-13 | 72.0 |
| MS.gene40701.t1 | AT4G35180 | 24.722 | 449 | 254 | 17 | 19 | 432 | 42 | 441 | 5.40e-12 | 68.2 |
Find 103 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTGGTTGGTTGCTTT+GGG | 0.120510 | 3.2:+88510232 | MS.gene40701:CDS |
| AATGTTAACTTATGGAAATT+TGG | 0.155373 | 3.2:-88509578 | None:intergenic |
| TCAACTTATTTAGACTAATT+TGG | 0.167184 | 3.2:+88510514 | MS.gene40701:CDS |
| TGCTTGGAGCATTTGGATTT+TGG | 0.172242 | 3.2:+88510607 | MS.gene40701:CDS |
| TATCAGAAGAAGACAAAATT+TGG | 0.185241 | 3.2:+88509863 | MS.gene40701:CDS |
| GCCCTTCTGGTTGGTTGCTT+TGG | 0.204187 | 3.2:+88510231 | MS.gene40701:CDS |
| TTTCTCATCTGTGTGCTTTC+CGG | 0.236560 | 3.2:-88510088 | None:intergenic |
| GGGAACATCCTCACTGGTTT+TGG | 0.241475 | 3.2:+88510199 | MS.gene40701:CDS |
| CTTGCATTGCTTGGAGCATT+TGG | 0.251558 | 3.2:+88510600 | MS.gene40701:CDS |
| AATCCCTACATGCTCGGTTT+TGG | 0.254191 | 3.2:+88509527 | MS.gene40701:CDS |
| TTGATATCAATGTTAACTTA+TGG | 0.271388 | 3.2:-88509586 | None:intergenic |
| AAAACTTGCAATAAGCTTCA+TGG | 0.288812 | 3.2:-88509499 | None:intergenic |
| ATGTTAACTTATGGAAATTT+GGG | 0.301767 | 3.2:-88509577 | None:intergenic |
| GAGGACAATATTTGTGATAA+TGG | 0.301794 | 3.2:+88510536 | MS.gene40701:CDS |
| GGAGAAAGAACCAGTTTGTT+TGG | 0.303768 | 3.2:+88509820 | MS.gene40701:CDS |
| ATTTCAACTATACGAAATAT+TGG | 0.312065 | 3.2:-88510411 | None:intergenic |
| GAGGAACACCCAAACAAAAT+TGG | 0.316656 | 3.2:+88510474 | MS.gene40701:CDS |
| CCATATGGTAGGAGCATATC+AGG | 0.321505 | 3.2:+88510273 | MS.gene40701:CDS |
| GTTGCTGCAATTACCTCTTT+TGG | 0.324708 | 3.2:+88509611 | MS.gene40701:CDS |
| AATATTTCGTATAGTTGAAA+TGG | 0.334003 | 3.2:+88510413 | MS.gene40701:CDS |
| GCTGCAGTTGGTTCCATTCA+TGG | 0.337754 | 3.2:+88510750 | MS.gene40701:CDS |
| AGATATCCAGACTCAGTTAA+TGG | 0.341029 | 3.2:+88508779 | MS.gene40701:CDS |
| CTCTTGCCATTAACTGAGTC+TGG | 0.343732 | 3.2:-88508785 | None:intergenic |
| AACGAGTTTCTTGCATTGCT+TGG | 0.351193 | 3.2:+88510591 | MS.gene40701:CDS |
| TCACTTGGCTATGCTGCATT+TGG | 0.358697 | 3.2:+88510163 | MS.gene40701:CDS |
| TATCTAAATGGAGGCTGAAA+AGG | 0.368758 | 3.2:+88507948 | None:intergenic |
| TACTGTTGTCTATGATATAA+TGG | 0.373164 | 3.2:+88509933 | MS.gene40701:CDS |
| ATGAGAAAGGCAAATGTGTT+GGG | 0.381443 | 3.2:+88510103 | MS.gene40701:CDS |
| ATTGTAAGTGTAAATAGAAA+TGG | 0.388984 | 3.2:-88508738 | None:intergenic |
| TACTTTGGTTCCAAACAAAC+TGG | 0.405444 | 3.2:-88509830 | None:intergenic |
| ATTCTTACTAATTCCATGAA+TGG | 0.418096 | 3.2:-88510763 | None:intergenic |
| TCTCTAGCAGTTGTGGTGTC+AGG | 0.423733 | 3.2:+88509659 | MS.gene40701:CDS |
| TGATAACCTTGGTCCTACTT+TGG | 0.426891 | 3.2:-88509845 | None:intergenic |
| CCTGATATGCTCCTACCATA+TGG | 0.439103 | 3.2:-88510273 | None:intergenic |
| GGTGGTGGGTGCAGGAGTGT+TGG | 0.440169 | 3.2:+88508649 | MS.gene40701:CDS |
| CAGGAGTGTTGGCTCTAGCA+TGG | 0.444476 | 3.2:+88508660 | MS.gene40701:CDS |
| AACAAACAAGACTCAATAGT+TGG | 0.446187 | 3.2:-88510710 | None:intergenic |
| TTCCTCCTATGTGGTTCACT+TGG | 0.448096 | 3.2:+88510148 | MS.gene40701:CDS |
| GCATTTGGTGATCACACTCC+AGG | 0.452200 | 3.2:+88510178 | MS.gene40701:CDS |
| ATAACAGTGGTGGTGGGTGC+AGG | 0.463122 | 3.2:+88508641 | MS.gene40701:CDS |
| GGTTATGCATTAATTGGAAG+TGG | 0.469904 | 3.2:+88509632 | MS.gene40701:CDS |
| ATATTTCGTATAGTTGAAAT+GGG | 0.469932 | 3.2:+88510414 | MS.gene40701:CDS |
| GAGAGATGTGCATTTGTATC+GGG | 0.470377 | 3.2:-88510647 | None:intergenic |
| TGAGAGATGTGCATTTGTAT+CGG | 0.473205 | 3.2:-88510648 | None:intergenic |
| AGTTTGTTTGGAACCAAAGT+AGG | 0.474169 | 3.2:+88509832 | MS.gene40701:CDS |
| ATTCAGTATGGGAAACTCGC+TGG | 0.477343 | 3.2:+88509083 | MS.gene40701:CDS |
| TGTATGCATTATAGTCCATA+TGG | 0.479211 | 3.2:+88510258 | MS.gene40701:CDS |
| GATGGAAGAATCAAGAGAAC+CGG | 0.479976 | 3.2:+88508012 | MS.gene40701:CDS |
| TCAAATAATCCCTACATGCT+CGG | 0.484226 | 3.2:+88509521 | MS.gene40701:CDS |
| ATCTAAATGGAGGCTGAAAA+GGG | 0.484463 | 3.2:+88507949 | None:intergenic |
| GCGTTCATCTTTCATAAATG+AGG | 0.484830 | 3.2:+88510455 | MS.gene40701:CDS |
| CCTTCTGGTTGGTTGCTTTG+GGG | 0.485026 | 3.2:+88510233 | MS.gene40701:CDS |
| GTTTCAGTAGCTGCTGCAGT+TGG | 0.487316 | 3.2:+88510738 | MS.gene40701:CDS |
| ATCCCAAAACCGAGCATGTA+GGG | 0.490118 | 3.2:-88509530 | None:intergenic |
| CTCATCTGTGTGCTTTCCGG+TGG | 0.491821 | 3.2:-88510085 | None:intergenic |
| GCAAGAAACTCGTTGAAGAA+TGG | 0.506573 | 3.2:-88510582 | None:intergenic |
| AATTAATGCATAACCAAAAG+AGG | 0.512333 | 3.2:-88509624 | None:intergenic |
| ACAGTACTCAAATGAGGAAG+TGG | 0.516285 | 3.2:+88507984 | MS.gene40701:CDS |
| GATGAGAAAGGCAAATGTGT+TGG | 0.517908 | 3.2:+88510102 | MS.gene40701:CDS |
| TTGTCTTCTTCTGATAACCT+TGG | 0.523957 | 3.2:-88509856 | None:intergenic |
| TGGACTCTCTCTAGCAGTTG+TGG | 0.531790 | 3.2:+88509652 | MS.gene40701:CDS |
| GAGAAATTACACTTATATGC+AGG | 0.536730 | 3.2:+88508805 | MS.gene40701:CDS |
| TTCAGTATGGGAAACTCGCT+GGG | 0.539810 | 3.2:+88509084 | MS.gene40701:CDS |
| GCATGGGCAATTTCTCAACT+AGG | 0.542467 | 3.2:+88508677 | MS.gene40701:CDS |
| AATGAGGAAGTGGATGATGA+TGG | 0.542692 | 3.2:+88507994 | MS.gene40701:CDS |
| TCTCAACTAGGATGGATAGC+TGG | 0.542950 | 3.2:+88508689 | MS.gene40701:CDS |
| ACACATAATAACAGTGGTGG+TGG | 0.543885 | 3.2:+88508634 | MS.gene40701:CDS |
| ACTTATTTAGACTAATTTGG+AGG | 0.544065 | 3.2:+88510517 | MS.gene40701:CDS |
| TTTGTGGATTGATTCAGTAT+GGG | 0.545041 | 3.2:+88509072 | MS.gene40701:CDS |
| CCCCAAAGCAACCAACCAGA+AGG | 0.561618 | 3.2:-88510233 | None:intergenic |
| GGGCAATTTCTCAACTAGGA+TGG | 0.565746 | 3.2:+88508681 | MS.gene40701:CDS |
| GGAAAGCACACAGATGAGAA+AGG | 0.569880 | 3.2:+88510090 | MS.gene40701:CDS |
| TATCAAACAGTACTCAAATG+AGG | 0.572155 | 3.2:+88507978 | MS.gene40701:CDS |
| AAACCAGTGAGGATGTTCCC+TGG | 0.577786 | 3.2:-88510196 | None:intergenic |
| TATACCTAGGTAAGCATGAA+CGG | 0.581147 | 3.2:-88508828 | None:intergenic |
| CACATTAAAGTCAAATCCAC+CGG | 0.582623 | 3.2:+88510069 | MS.gene40701:CDS |
| GGTTGCAGGGAACGTGTTGA+CGG | 0.584738 | 3.2:+88508604 | MS.gene40701:intron |
| TTTGAGACAATAAAATCTGA+AGG | 0.587153 | 3.2:-88509553 | None:intergenic |
| AGGAGTGTTGGCTCTAGCAT+GGG | 0.591346 | 3.2:+88508661 | MS.gene40701:CDS |
| GATCCCAAAACCGAGCATGT+AGG | 0.597152 | 3.2:-88509531 | None:intergenic |
| CACATAATAACAGTGGTGGT+GGG | 0.606869 | 3.2:+88508635 | MS.gene40701:CDS |
| ACTCCAGGGAACATCCTCAC+TGG | 0.606948 | 3.2:+88510193 | MS.gene40701:CDS |
| TATAACTTGCTCTACAAGCA+TGG | 0.608733 | 3.2:+88509124 | MS.gene40701:CDS |
| CATAGCCAAGTGAACCACAT+AGG | 0.609497 | 3.2:-88510153 | None:intergenic |
| AAACTCGCTGGGATTACAGT+GGG | 0.611394 | 3.2:+88509095 | MS.gene40701:CDS |
| AGCCAAGTGAACCACATAGG+AGG | 0.616311 | 3.2:-88510150 | None:intergenic |
| CCCAAAGCAACCAACCAGAA+GGG | 0.617292 | 3.2:-88510232 | None:intergenic |
| CAGGCCGTTCATGCTTACCT+AGG | 0.625589 | 3.2:+88508824 | MS.gene40701:CDS |
| AATGGCCACAGTTATTGCCA+TGG | 0.626509 | 3.2:+88510554 | MS.gene40701:CDS |
| GTTGAAGAATGGCATTGCCA+TGG | 0.631337 | 3.2:-88510571 | None:intergenic |
| AAATGGGTGCCAACATGATG+TGG | 0.632507 | 3.2:+88510430 | MS.gene40701:CDS |
| TGAGAAAGGCAAATGTGTTG+GGG | 0.635338 | 3.2:+88510104 | MS.gene40701:CDS |
| TTGGAACCAAAGTAGGACCA+AGG | 0.639180 | 3.2:+88509839 | MS.gene40701:CDS |
| TGAACGCGGCCACATCATGT+TGG | 0.643082 | 3.2:-88510439 | None:intergenic |
| TGCATTATAGTCCATATGGT+AGG | 0.648433 | 3.2:+88510262 | MS.gene40701:CDS |
| ATCGGGAAGAAGACAATGAG+TGG | 0.651715 | 3.2:-88510630 | None:intergenic |
| CATTTGGTGATCACACTCCA+GGG | 0.652654 | 3.2:+88510179 | MS.gene40701:CDS |
| CATAAAATCCAAAACCAGTG+AGG | 0.669591 | 3.2:-88510207 | None:intergenic |
| AACACACATAATAACAGTGG+TGG | 0.670192 | 3.2:+88508631 | MS.gene40701:CDS |
| GAAACTCGCTGGGATTACAG+TGG | 0.694611 | 3.2:+88509094 | MS.gene40701:CDS |
| AACAACACACATAATAACAG+TGG | 0.695542 | 3.2:+88508628 | MS.gene40701:CDS |
| CATTGCCATGGCAATAACTG+TGG | 0.713530 | 3.2:-88510559 | None:intergenic |
| TCATTTATGAAAGATGAACG+CGG | 0.742748 | 3.2:-88510453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTTGATGTATTTAA+TGG | + | chr3.2:88508553-88508572 | MS.gene40701:intron | 10.0% |
| !!! | CTATTTATATTAATTTTTGT+GGG | + | chr3.2:88508364-88508383 | MS.gene40701:intron | 10.0% |
| !!! | TATTTATATTAATTTTTGTG+GGG | + | chr3.2:88508365-88508384 | MS.gene40701:intron | 10.0% |
| !!! | TCTATTTATATTAATTTTTG+TGG | + | chr3.2:88508363-88508382 | MS.gene40701:intron | 10.0% |
| !! | ATGTATTTAATGGAAATAAT+TGG | + | chr3.2:88508563-88508582 | MS.gene40701:intron | 15.0% |
| !! | TTTCATAATTATCCAATAAT+TGG | - | chr3.2:88509736-88509755 | None:intergenic | 15.0% |
| !!! | ATATGTTGTTAATATTTTGT+TGG | - | chr3.2:88509710-88509729 | None:intergenic | 15.0% |
| !!! | TCTAATCTATGTTTTTATTT+AGG | + | chr3.2:88510045-88510064 | MS.gene40701:intron | 15.0% |
| !!! | TTTTATTGCAAAAAAAGAAA+AGG | - | chr3.2:88508339-88508358 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTTTGCAATAAA+AGG | + | chr3.2:88508338-88508357 | MS.gene40701:intron | 15.0% |
| !! | AAATTGACAATTTCAATAGA+TGG | - | chr3.2:88508243-88508262 | None:intergenic | 20.0% |
| !! | AACACATGAATTATATGAAA+AGG | - | chr3.2:88508098-88508117 | None:intergenic | 20.0% |
| !! | AATATTTCGTATAGTTGAAA+TGG | + | chr3.2:88510413-88510432 | MS.gene40701:CDS | 20.0% |
| !! | AATGATAGCATTAGTTAATA+TGG | - | chr3.2:88508439-88508458 | None:intergenic | 20.0% |
| !! | AATGTTAACTTATGGAAATT+TGG | - | chr3.2:88509581-88509600 | None:intergenic | 20.0% |
| !! | ACAACATATATTCCAATTAT+TGG | + | chr3.2:88509721-88509740 | MS.gene40701:intron | 20.0% |
| !! | ATATTTCGTATAGTTGAAAT+GGG | + | chr3.2:88510414-88510433 | MS.gene40701:CDS | 20.0% |
| !! | ATGTTAACTTATGGAAATTT+GGG | - | chr3.2:88509580-88509599 | None:intergenic | 20.0% |
| !! | ATTGTAAGTGTAAATAGAAA+TGG | - | chr3.2:88508741-88508760 | None:intergenic | 20.0% |
| !! | ATTTCAACTATACGAAATAT+TGG | - | chr3.2:88510414-88510433 | None:intergenic | 20.0% |
| !! | CATCAAATATATTATCTAAC+TGG | - | chr3.2:88508546-88508565 | None:intergenic | 20.0% |
| !! | TAAAAGAAAACATCTTTCAA+AGG | - | chr3.2:88508180-88508199 | None:intergenic | 20.0% |
| !! | TCAACTTATTTAGACTAATT+TGG | + | chr3.2:88510514-88510533 | MS.gene40701:CDS | 20.0% |
| !! | TGTATTTATGATATATACCT+AGG | - | chr3.2:88508844-88508863 | None:intergenic | 20.0% |
| !! | TTCCAATTATGTATTTACTA+AGG | + | chr3.2:88509773-88509792 | MS.gene40701:intron | 20.0% |
| !! | TTGATATCAATGTTAACTTA+TGG | - | chr3.2:88509589-88509608 | None:intergenic | 20.0% |
| !!! | TTCTATTAATCAATTTGTTG+AGG | - | chr3.2:88509250-88509269 | None:intergenic | 20.0% |
| ! | AATTAATGCATAACCAAAAG+AGG | - | chr3.2:88509627-88509646 | None:intergenic | 25.0% |
| ! | ACTTATTTAGACTAATTTGG+AGG | + | chr3.2:88510517-88510536 | MS.gene40701:CDS | 25.0% |
| ! | ATTCTTACTAATTCCATGAA+TGG | - | chr3.2:88510766-88510785 | None:intergenic | 25.0% |
| ! | GAAGTATAAAAAAGTAGACT+TGG | + | chr3.2:88509981-88510000 | MS.gene40701:intron | 25.0% |
| ! | TACTGTTGTCTATGATATAA+TGG | + | chr3.2:88509933-88509952 | MS.gene40701:CDS | 25.0% |
| ! | TAGAGATAACTGATATCAAT+GGG | - | chr3.2:88510029-88510048 | None:intergenic | 25.0% |
| ! | TATCAGAAGAAGACAAAATT+TGG | + | chr3.2:88509863-88509882 | MS.gene40701:CDS | 25.0% |
| ! | TGCCTTAGTAAATACATAAT+TGG | - | chr3.2:88509778-88509797 | None:intergenic | 25.0% |
| ! | TGGAAATAATTGGATTTGAA+TGG | + | chr3.2:88508573-88508592 | MS.gene40701:intron | 25.0% |
| ! | TTAGAGATAACTGATATCAA+TGG | - | chr3.2:88510030-88510049 | None:intergenic | 25.0% |
| !! | TAAACAGATTTTCATTGAAG+TGG | + | chr3.2:88510679-88510698 | MS.gene40701:CDS | 25.0% |
| !! | TTTGAGACAATAAAATCTGA+AGG | - | chr3.2:88509556-88509575 | None:intergenic | 25.0% |
| !!! | TCTTTTGGTTATGCATTAAT+TGG | + | chr3.2:88509626-88509645 | MS.gene40701:CDS | 25.0% |
| !!! | TGTATTTACTAAGGCATTTT+TGG | + | chr3.2:88509782-88509801 | MS.gene40701:intron | 25.0% |
| !!! | TTGATTAACCAGAGTATTTT+TGG | + | chr3.2:88509161-88509180 | MS.gene40701:intron | 25.0% |
| AAAACTTGCAATAAGCTTCA+TGG | - | chr3.2:88509502-88509521 | None:intergenic | 30.0% | |
| AACAAACAAGACTCAATAGT+TGG | - | chr3.2:88510713-88510732 | None:intergenic | 30.0% | |
| AACAACACACATAATAACAG+TGG | + | chr3.2:88508628-88508647 | MS.gene40701:CDS | 30.0% | |
| ACGTCATGAAAGAAAATAAG+AGG | - | chr3.2:88508306-88508325 | None:intergenic | 30.0% | |
| GAAATGAAATGAATGCATAC+CGG | - | chr3.2:88508034-88508053 | None:intergenic | 30.0% | |
| GAGAAATTACACTTATATGC+AGG | + | chr3.2:88508805-88508824 | MS.gene40701:CDS | 30.0% | |
| GAGGACAATATTTGTGATAA+TGG | + | chr3.2:88510536-88510555 | MS.gene40701:CDS | 30.0% | |
| GTATGTTGATATAATGTTGC+AGG | + | chr3.2:88510377-88510396 | MS.gene40701:intron | 30.0% | |
| GTTGAAGGAGTAATAGAATT+TGG | + | chr3.2:88508395-88508414 | MS.gene40701:intron | 30.0% | |
| TATCAAACAGTACTCAAATG+AGG | + | chr3.2:88507978-88507997 | MS.gene40701:CDS | 30.0% | |
| TCATTTATGAAAGATGAACG+CGG | - | chr3.2:88510456-88510475 | None:intergenic | 30.0% | |
| TGTATGCATTATAGTCCATA+TGG | + | chr3.2:88510258-88510277 | MS.gene40701:CDS | 30.0% | |
| TTGCAATTTCAATGCATTCA+AGG | - | chr3.2:88509223-88509242 | None:intergenic | 30.0% | |
| ! | AAGGACATATGATTCTGAAA+TGG | - | chr3.2:88508079-88508098 | None:intergenic | 30.0% |
| ! | TTTGTGGATTGATTCAGTAT+GGG | + | chr3.2:88509072-88509091 | MS.gene40701:CDS | 30.0% |
| ! | TTTTCTTTCATGACGTCAAA+CGG | + | chr3.2:88508310-88508329 | MS.gene40701:intron | 30.0% |
| !! | AGTACAATTTTAGCGTGAAT+CGG | - | chr3.2:88508935-88508954 | None:intergenic | 30.0% |
| !! | TCAAAGAGCCAATTTTGTTT+GGG | - | chr3.2:88510485-88510504 | None:intergenic | 30.0% |
| !! | TTGATTTGCTTCCACAAAAA+TGG | + | chr3.2:88509476-88509495 | MS.gene40701:CDS | 30.0% |
| !! | TTTAGCGTTGACAAAAATAG+TGG | - | chr3.2:88508985-88509004 | None:intergenic | 30.0% |
| !! | TTTTGTGGATTGATTCAGTA+TGG | + | chr3.2:88509071-88509090 | MS.gene40701:CDS | 30.0% |
| !!! | TTTTAGGACCAAAAATACTC+TGG | - | chr3.2:88509172-88509191 | None:intergenic | 30.0% |
| AACACACATAATAACAGTGG+TGG | + | chr3.2:88508631-88508650 | MS.gene40701:CDS | 35.0% | |
| AGATATCCAGACTCAGTTAA+TGG | + | chr3.2:88508779-88508798 | MS.gene40701:CDS | 35.0% | |
| ATGAGAAAGGCAAATGTGTT+GGG | + | chr3.2:88510103-88510122 | MS.gene40701:CDS | 35.0% | |
| CACATTAAAGTCAAATCCAC+CGG | + | chr3.2:88510069-88510088 | MS.gene40701:CDS | 35.0% | |
| CATAAAATCCAAAACCAGTG+AGG | - | chr3.2:88510210-88510229 | None:intergenic | 35.0% | |
| CCTAATTTATACATGTGGCA+GGG | + | chr3.2:88509442-88509461 | MS.gene40701:intron | 35.0% | |
| CCTGCCACATGTATAAATTA+GGG | - | chr3.2:88509444-88509463 | None:intergenic | 35.0% | |
| CTGCCACATGTATAAATTAG+GGG | - | chr3.2:88509443-88509462 | None:intergenic | 35.0% | |
| GCGTTCATCTTTCATAAATG+AGG | + | chr3.2:88510455-88510474 | MS.gene40701:CDS | 35.0% | |
| GGTTATGCATTAATTGGAAG+TGG | + | chr3.2:88509632-88509651 | MS.gene40701:CDS | 35.0% | |
| GTTCCACCTAATGACAAAAT+GGG | - | chr3.2:88509041-88509060 | None:intergenic | 35.0% | |
| TATACCTAGGTAAGCATGAA+CGG | - | chr3.2:88508831-88508850 | None:intergenic | 35.0% | |
| TCAAATAATCCCTACATGCT+CGG | + | chr3.2:88509521-88509540 | MS.gene40701:CDS | 35.0% | |
| TGAGAGATGTGCATTTGTAT+CGG | - | chr3.2:88510651-88510670 | None:intergenic | 35.0% | |
| TGAGTGAGGTTGTATTATTG+TGG | + | chr3.2:88509196-88509215 | MS.gene40701:intron | 35.0% | |
| TGCATTATAGTCCATATGGT+AGG | + | chr3.2:88510262-88510281 | MS.gene40701:CDS | 35.0% | |
| TGCCACATGTATAAATTAGG+GGG | - | chr3.2:88509442-88509461 | None:intergenic | 35.0% | |
| TGTTCCACCTAATGACAAAA+TGG | - | chr3.2:88509042-88509061 | None:intergenic | 35.0% | |
| TTGTCTTCTTCTGATAACCT+TGG | - | chr3.2:88509859-88509878 | None:intergenic | 35.0% | |
| ! | ACAATACTTTTCCTCCTATG+TGG | + | chr3.2:88510139-88510158 | MS.gene40701:CDS | 35.0% |
| ! | AGTTTGTTTGGAACCAAAGT+AGG | + | chr3.2:88509832-88509851 | MS.gene40701:CDS | 35.0% |
| ! | CAACCTCACTCACATATTTT+AGG | - | chr3.2:88509188-88509207 | None:intergenic | 35.0% |
| ! | GGAACAATGCACATATTTTG+TGG | + | chr3.2:88509056-88509075 | MS.gene40701:CDS | 35.0% |
| ! | GTCAAAGAGCCAATTTTGTT+TGG | - | chr3.2:88510486-88510505 | None:intergenic | 35.0% |
| ! | TACTTTGGTTCCAAACAAAC+TGG | - | chr3.2:88509833-88509852 | None:intergenic | 35.0% |
| ! | TAGTTGCCCATTTTGTCATT+AGG | + | chr3.2:88509032-88509051 | MS.gene40701:intron | 35.0% |
| !! | GTACAATTTTAGCGTGAATC+GGG | - | chr3.2:88508934-88508953 | None:intergenic | 35.0% |
| !! | TATAACTTGCTCTACAAGCA+TGG | + | chr3.2:88509124-88509143 | MS.gene40701:CDS | 35.0% |
| !!! | TGGAAAGTTTTGACTGCTTT+GGG | + | chr3.2:88509883-88509902 | MS.gene40701:CDS | 35.0% |
| !!! | TTGGAAAGTTTTGACTGCTT+TGG | + | chr3.2:88509882-88509901 | MS.gene40701:CDS | 35.0% |
| AACGAGTTTCTTGCATTGCT+TGG | + | chr3.2:88510591-88510610 | MS.gene40701:CDS | 40.0% | |
| AATGAGGAAGTGGATGATGA+TGG | + | chr3.2:88507994-88508013 | MS.gene40701:CDS | 40.0% | |
| ACACATAATAACAGTGGTGG+TGG | + | chr3.2:88508634-88508653 | MS.gene40701:CDS | 40.0% | |
| ACAGTACTCAAATGAGGAAG+TGG | + | chr3.2:88507984-88508003 | MS.gene40701:CDS | 40.0% | |
| ACTGATATCAATGGGACTAG+TGG | - | chr3.2:88510021-88510040 | None:intergenic | 40.0% | |
| ATGTATAAATTAGGGGGGGT+GGG | - | chr3.2:88509436-88509455 | None:intergenic | 40.0% | |
| CACATAATAACAGTGGTGGT+GGG | + | chr3.2:88508635-88508654 | MS.gene40701:CDS | 40.0% | |
| CCACATGTATAAATTAGGGG+GGG | - | chr3.2:88509440-88509459 | None:intergenic | 40.0% | |
| CCCTAATTTATACATGTGGC+AGG | + | chr3.2:88509441-88509460 | MS.gene40701:intron | 40.0% | |
| CCCTGCCACATGTATAAATT+AGG | - | chr3.2:88509445-88509464 | None:intergenic | 40.0% | |
| GAGAGATGTGCATTTGTATC+GGG | - | chr3.2:88510650-88510669 | None:intergenic | 40.0% | |
| GAGGAACACCCAAACAAAAT+TGG | + | chr3.2:88510474-88510493 | MS.gene40701:CDS | 40.0% | |
| GATGAGAAAGGCAAATGTGT+TGG | + | chr3.2:88510102-88510121 | MS.gene40701:CDS | 40.0% | |
| GATGGAAGAATCAAGAGAAC+CGG | + | chr3.2:88508012-88508031 | MS.gene40701:CDS | 40.0% | |
| GCAAGAAACTCGTTGAAGAA+TGG | - | chr3.2:88510585-88510604 | None:intergenic | 40.0% | |
| GCCACATGTATAAATTAGGG+GGG | - | chr3.2:88509441-88509460 | None:intergenic | 40.0% | |
| GGTCCTAAAATATGTGAGTG+AGG | + | chr3.2:88509182-88509201 | MS.gene40701:intron | 40.0% | |
| TCGCAATTAATCCCTCAAGT+CGG | - | chr3.2:88508900-88508919 | None:intergenic | 40.0% | |
| TGAGAAAGGCAAATGTGTTG+GGG | + | chr3.2:88510104-88510123 | MS.gene40701:CDS | 40.0% | |
| TGATAACCTTGGTCCTACTT+TGG | - | chr3.2:88509848-88509867 | None:intergenic | 40.0% | |
| TGGAAAGACACAAGTGATGA+AGG | - | chr3.2:88509690-88509709 | None:intergenic | 40.0% | |
| TGGATTTGAATGGATGCTTG+TGG | + | chr3.2:88508583-88508602 | MS.gene40701:intron | 40.0% | |
| TTTCTCATCTGTGTGCTTTC+CGG | - | chr3.2:88510091-88510110 | None:intergenic | 40.0% | |
| ! | ATTTTATGAGCCCTTCTGGT+TGG | + | chr3.2:88510222-88510241 | MS.gene40701:CDS | 40.0% |
| ! | GGAGAAAGAACCAGTTTGTT+TGG | + | chr3.2:88509820-88509839 | MS.gene40701:CDS | 40.0% |
| ! | GTTGCTGCAATTACCTCTTT+TGG | + | chr3.2:88509611-88509630 | MS.gene40701:CDS | 40.0% |
| ! | TTGCCCATTTTGTCATTAGG+TGG | + | chr3.2:88509035-88509054 | MS.gene40701:intron | 40.0% |
| ! | TTGGATTTTATGAGCCCTTC+TGG | + | chr3.2:88510218-88510237 | MS.gene40701:CDS | 40.0% |
| !! | TGCTTGGAGCATTTGGATTT+TGG | + | chr3.2:88510607-88510626 | MS.gene40701:CDS | 40.0% |
| !! | TTTTGGCTGTGAATAGGGAA+AGG | + | chr3.2:88509799-88509818 | MS.gene40701:intron | 40.0% |
| !!! | AAGCTTCATGGCCATTTTTG+TGG | - | chr3.2:88509490-88509509 | None:intergenic | 40.0% |
| !!! | AGGCATTTTTGGCTGTGAAT+AGG | + | chr3.2:88509793-88509812 | MS.gene40701:intron | 40.0% |
| !!! | GGCATTTTTGGCTGTGAATA+GGG | + | chr3.2:88509794-88509813 | MS.gene40701:intron | 40.0% |
| AAACTCGCTGGGATTACAGT+GGG | + | chr3.2:88509095-88509114 | MS.gene40701:CDS | 45.0% | |
| AAATGGGTGCCAACATGATG+TGG | + | chr3.2:88510430-88510449 | MS.gene40701:CDS | 45.0% | |
| AATGGATGCTTGTGGTTGCA+GGG | + | chr3.2:88508591-88508610 | MS.gene40701:intron | 45.0% | |
| AATGGCCACAGTTATTGCCA+TGG | + | chr3.2:88510554-88510573 | MS.gene40701:CDS | 45.0% | |
| ATCCCAAAACCGAGCATGTA+GGG | - | chr3.2:88509533-88509552 | None:intergenic | 45.0% | |
| ATCGGGAAGAAGACAATGAG+TGG | - | chr3.2:88510633-88510652 | None:intergenic | 45.0% | |
| ATTCAGTATGGGAAACTCGC+TGG | + | chr3.2:88509083-88509102 | MS.gene40701:CDS | 45.0% | |
| CATAGCCAAGTGAACCACAT+AGG | - | chr3.2:88510156-88510175 | None:intergenic | 45.0% | |
| CATGTATAAATTAGGGGGGG+TGG | - | chr3.2:88509437-88509456 | None:intergenic | 45.0% | |
| CATTGCCATGGCAATAACTG+TGG | - | chr3.2:88510562-88510581 | None:intergenic | 45.0% | |
| CCCCCCCTAATTTATACATG+TGG | + | chr3.2:88509437-88509456 | MS.gene40701:intron | 45.0% | |
| CCCTCAAGTCGGATAAATGT+GGG | - | chr3.2:88508889-88508908 | None:intergenic | 45.0% | |
| CCTGATATGCTCCTACCATA+TGG | - | chr3.2:88510276-88510295 | None:intergenic | 45.0% | |
| CTCTTGCCATTAACTGAGTC+TGG | - | chr3.2:88508788-88508807 | None:intergenic | 45.0% | |
| GACTTGAGGGATTAATTGCG+AGG | + | chr3.2:88508899-88508918 | MS.gene40701:intron | 45.0% | |
| GCATGGGCAATTTCTCAACT+AGG | + | chr3.2:88508677-88508696 | MS.gene40701:CDS | 45.0% | |
| GGGCAATTTCTCAACTAGGA+TGG | + | chr3.2:88508681-88508700 | MS.gene40701:CDS | 45.0% | |
| GTTGAAGAATGGCATTGCCA+TGG | - | chr3.2:88510574-88510593 | None:intergenic | 45.0% | |
| TCACTTGGCTATGCTGCATT+TGG | + | chr3.2:88510163-88510182 | MS.gene40701:CDS | 45.0% | |
| TCCCTCAAGTCGGATAAATG+TGG | - | chr3.2:88508890-88508909 | None:intergenic | 45.0% | |
| TCTCAACTAGGATGGATAGC+TGG | + | chr3.2:88508689-88508708 | MS.gene40701:CDS | 45.0% | |
| TGTATAAATTAGGGGGGGTG+GGG | - | chr3.2:88509435-88509454 | None:intergenic | 45.0% | |
| TTCAGTATGGGAAACTCGCT+GGG | + | chr3.2:88509084-88509103 | MS.gene40701:CDS | 45.0% | |
| TTCCTCCTATGTGGTTCACT+TGG | + | chr3.2:88510148-88510167 | MS.gene40701:CDS | 45.0% | |
| TTGGAACCAAAGTAGGACCA+AGG | + | chr3.2:88509839-88509858 | MS.gene40701:CDS | 45.0% | |
| ! | AATCCCTACATGCTCGGTTT+TGG | + | chr3.2:88509527-88509546 | MS.gene40701:CDS | 45.0% |
| ! | ATCCCTACATGCTCGGTTTT+GGG | + | chr3.2:88509528-88509547 | MS.gene40701:CDS | 45.0% |
| ! | CATTTGGTGATCACACTCCA+GGG | + | chr3.2:88510179-88510198 | MS.gene40701:CDS | 45.0% |
| ! | CCATATGGTAGGAGCATATC+AGG | + | chr3.2:88510273-88510292 | MS.gene40701:CDS | 45.0% |
| ! | CCCACATTTATCCGACTTGA+GGG | + | chr3.2:88508886-88508905 | MS.gene40701:intron | 45.0% |
| ! | CTTGCATTGCTTGGAGCATT+TGG | + | chr3.2:88510600-88510619 | MS.gene40701:CDS | 45.0% |
| ! | GGAAAGCACACAGATGAGAA+AGG | + | chr3.2:88510090-88510109 | MS.gene40701:CDS | 45.0% |
| ! | TCCCACATTTATCCGACTTG+AGG | + | chr3.2:88508885-88508904 | MS.gene40701:intron | 45.0% |
| ! | TTGTGGGGATTGTGAGTTGA+AGG | + | chr3.2:88508380-88508399 | MS.gene40701:intron | 45.0% |
| !!! | TCTTTTAAAATAATTTATTT+TGG | + | chr3.2:88508193-88508212 | MS.gene40701:intron | 5.0% |
| AAACCAGTGAGGATGTTCCC+TGG | - | chr3.2:88510199-88510218 | None:intergenic | 50.0% | |
| AGCCAAGTGAACCACATAGG+AGG | - | chr3.2:88510153-88510172 | None:intergenic | 50.0% | |
| CCCAAAGCAACCAACCAGAA+GGG | - | chr3.2:88510235-88510254 | None:intergenic | 50.0% | |
| GAAACTCGCTGGGATTACAG+TGG | + | chr3.2:88509094-88509113 | MS.gene40701:CDS | 50.0% | |
| GAATGGATGCTTGTGGTTGC+AGG | + | chr3.2:88508590-88508609 | MS.gene40701:intron | 50.0% | |
| GATCCCAAAACCGAGCATGT+AGG | - | chr3.2:88509534-88509553 | None:intergenic | 50.0% | |
| GTTTCAGTAGCTGCTGCAGT+TGG | + | chr3.2:88510738-88510757 | MS.gene40701:CDS | 50.0% | |
| TCTCTAGCAGTTGTGGTGTC+AGG | + | chr3.2:88509659-88509678 | MS.gene40701:CDS | 50.0% | |
| TGGACTCTCTCTAGCAGTTG+TGG | + | chr3.2:88509652-88509671 | MS.gene40701:CDS | 50.0% | |
| ! | CCCTTCTGGTTGGTTGCTTT+GGG | + | chr3.2:88510232-88510251 | MS.gene40701:CDS | 50.0% |
| ! | CCTTCTGGTTGGTTGCTTTG+GGG | + | chr3.2:88510233-88510252 | MS.gene40701:CDS | 50.0% |
| ! | GCATTTGGTGATCACACTCC+AGG | + | chr3.2:88510178-88510197 | MS.gene40701:CDS | 50.0% |
| ! | GCTGCAGTTGGTTCCATTCA+TGG | + | chr3.2:88510750-88510769 | MS.gene40701:CDS | 50.0% |
| !! | AGGAGTGTTGGCTCTAGCAT+GGG | + | chr3.2:88508661-88508680 | MS.gene40701:CDS | 50.0% |
| !!! | GGGAACATCCTCACTGGTTT+TGG | + | chr3.2:88510199-88510218 | MS.gene40701:CDS | 50.0% |
| ACTCCAGGGAACATCCTCAC+TGG | + | chr3.2:88510193-88510212 | MS.gene40701:CDS | 55.0% | |
| CAGGCCGTTCATGCTTACCT+AGG | + | chr3.2:88508824-88508843 | MS.gene40701:CDS | 55.0% | |
| CCCCAAAGCAACCAACCAGA+AGG | - | chr3.2:88510236-88510255 | None:intergenic | 55.0% | |
| CTCATCTGTGTGCTTTCCGG+TGG | - | chr3.2:88510088-88510107 | None:intergenic | 55.0% | |
| GGTTGCAGGGAACGTGTTGA+CGG | + | chr3.2:88508604-88508623 | MS.gene40701:intron | 55.0% | |
| TGAACGCGGCCACATCATGT+TGG | - | chr3.2:88510442-88510461 | None:intergenic | 55.0% | |
| ! | GCCCTTCTGGTTGGTTGCTT+TGG | + | chr3.2:88510231-88510250 | MS.gene40701:CDS | 55.0% |
| !! | ATAACAGTGGTGGTGGGTGC+AGG | + | chr3.2:88508641-88508660 | MS.gene40701:CDS | 55.0% |
| !! | CAGGAGTGTTGGCTCTAGCA+TGG | + | chr3.2:88508660-88508679 | MS.gene40701:CDS | 55.0% |
| ATTAGGGGGGGTGGGGTGAG+CGG | - | chr3.2:88509428-88509447 | None:intergenic | 65.0% | |
| !! | GGTGGTGGGTGCAGGAGTGT+TGG | + | chr3.2:88508649-88508668 | MS.gene40701:CDS | 65.0% |
| TTAGGGGGGGTGGGGTGAGC+GGG | - | chr3.2:88509427-88509446 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 88507955 | 88510821 | 88507955 | ID=MS.gene40701 |
| chr3.2 | mRNA | 88507955 | 88510821 | 88507955 | ID=MS.gene40701.t1;Parent=MS.gene40701 |
| chr3.2 | exon | 88507955 | 88508033 | 88507955 | ID=MS.gene40701.t1.exon1;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88507955 | 88508033 | 88507955 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88508612 | 88508845 | 88508612 | ID=MS.gene40701.t1.exon2;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88508612 | 88508845 | 88508612 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88509054 | 88509147 | 88509054 | ID=MS.gene40701.t1.exon3;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88509054 | 88509147 | 88509054 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88509463 | 88509680 | 88509463 | ID=MS.gene40701.t1.exon4;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88509463 | 88509680 | 88509463 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88509815 | 88509954 | 88509815 | ID=MS.gene40701.t1.exon5;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88509815 | 88509954 | 88509815 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88510067 | 88510294 | 88510067 | ID=MS.gene40701.t1.exon6;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88510067 | 88510294 | 88510067 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| chr3.2 | exon | 88510399 | 88510821 | 88510399 | ID=MS.gene40701.t1.exon7;Parent=MS.gene40701.t1 |
| chr3.2 | CDS | 88510399 | 88510821 | 88510399 | ID=cds.MS.gene40701.t1;Parent=MS.gene40701.t1 |
| Gene Sequence |
| Protein sequence |
