Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70540.t1 | XP_004502057.1 | 90.1 | 223 | 21 | 1 | 1 | 222 | 1 | 223 | 7.10E-104 | 386.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70540.t1 | Q9MAP3 | 73.4 | 229 | 46 | 4 | 1 | 222 | 1 | 221 | 1.4e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70540.t1 | A0A1S2YAR9 | 90.1 | 223 | 21 | 1 | 1 | 222 | 1 | 223 | 5.1e-104 | 386.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene70540 | 0.832135 | 1.12E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene70540 | 0.849873 | 2.45E-60 | -1.69E-46 |
| MS.gene049173 | MS.gene70540 | 0.808165 | 3.54E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene70540 | 0.870913 | 1.02E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene70540 | 0.868009 | 8.98E-66 | -1.69E-46 |
| MS.gene049232 | MS.gene70540 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene70540 | 0.890981 | 6.02E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene70540 | 0.873255 | 1.69E-67 | -1.69E-46 |
| MS.gene049427 | MS.gene70540 | 0.872903 | 2.22E-67 | -1.69E-46 |
| MS.gene049609 | MS.gene70540 | 0.849373 | 3.37E-60 | -1.69E-46 |
| MS.gene049614 | MS.gene70540 | 0.847364 | 1.21E-59 | -1.69E-46 |
| MS.gene049615 | MS.gene70540 | 0.836323 | 1.00E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene70540 | 0.885833 | 5.78E-72 | -1.69E-46 |
| MS.gene049805 | MS.gene70540 | 0.838479 | 2.81E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene70540 | 0.809113 | 2.22E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene70540 | 0.915535 | 5.25E-85 | -1.69E-46 |
| MS.gene050165 | MS.gene70540 | 0.888066 | 8.21E-73 | -1.69E-46 |
| MS.gene050333 | MS.gene70540 | 0.872703 | 2.59E-67 | -1.69E-46 |
| MS.gene050353 | MS.gene70540 | -0.81601 | 6.89E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene70540 | 0.87324 | 1.71E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene70540 | 0.872098 | 4.13E-67 | -1.69E-46 |
| MS.gene050538 | MS.gene70540 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene70540 | 0.83247 | 9.28E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene70540 | 0.851919 | 6.48E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene70540 | 0.844311 | 8.18E-59 | -1.69E-46 |
| MS.gene050647 | MS.gene70540 | -0.810872 | 9.29E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene70540 | 0.858812 | 6.37E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene70540 | 0.875129 | 3.93E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene70540 | 0.860759 | 1.65E-63 | -1.69E-46 |
| MS.gene050767 | MS.gene70540 | 0.853745 | 1.95E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene70540 | 0.855308 | 6.88E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene70540 | 0.876517 | 1.31E-68 | -1.69E-46 |
| MS.gene050781 | MS.gene70540 | 0.851958 | 6.32E-61 | -1.69E-46 |
| MS.gene050783 | MS.gene70540 | 0.826828 | 2.19E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene70540 | 0.869797 | 2.36E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene70540 | 0.843468 | 1.38E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene70540 | 0.904209 | 1.56E-79 | -1.69E-46 |
| MS.gene05101 | MS.gene70540 | 0.813579 | 2.38E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene70540 | 0.855417 | 6.40E-62 | -1.69E-46 |
| MS.gene051551 | MS.gene70540 | 0.844768 | 6.16E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene70540 | 0.830812 | 2.38E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene70540 | 0.868212 | 7.72E-66 | -1.69E-46 |
| MS.gene051810 | MS.gene70540 | 0.845868 | 3.11E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene70540 | 0.850981 | 1.19E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene70540 | 0.881522 | 2.24E-70 | -1.69E-46 |
| MS.gene052379 | MS.gene70540 | 0.854111 | 1.53E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene70540 | 0.811174 | 7.99E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene70540 | 0.806389 | 8.43E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene70540 | 0.816661 | 4.93E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene70540 | 0.816111 | 6.55E-52 | -1.69E-46 |
| MS.gene052605 | MS.gene70540 | 0.800725 | 1.26E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene70540 | 0.855084 | 8.00E-62 | -1.69E-46 |
| MS.gene052670 | MS.gene70540 | 0.834709 | 2.56E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene70540 | 0.810734 | 9.95E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene70540 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene70540 | 0.821651 | 3.61E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene70540 | 0.819758 | 9.82E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene70540 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene70540 | 0.827442 | 1.56E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene70540 | 0.826485 | 2.64E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene70540 | 0.831886 | 1.29E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene70540 | 0.910388 | 1.98E-82 | -1.69E-46 |
| MS.gene053286 | MS.gene70540 | 0.904495 | 1.16E-79 | -1.69E-46 |
| MS.gene053322 | MS.gene70540 | 0.89951 | 1.84E-77 | -1.69E-46 |
| MS.gene053436 | MS.gene70540 | 0.840433 | 8.72E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene70540 | 0.863525 | 2.34E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene70540 | 0.835044 | 2.11E-56 | -1.69E-46 |
| MS.gene054374 | MS.gene70540 | 0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene70540 | 0.850782 | 1.36E-60 | -1.69E-46 |
| MS.gene054408 | MS.gene70540 | 0.839914 | 1.19E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene70540 | 0.829143 | 6.07E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene70540 | 0.840079 | 1.08E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene70540 | 0.885844 | 5.73E-72 | -1.69E-46 |
| MS.gene05470 | MS.gene70540 | 0.813845 | 2.08E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene70540 | 0.871843 | 5.02E-67 | -1.69E-46 |
| MS.gene054803 | MS.gene70540 | 0.870691 | 1.20E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene70540 | 0.871054 | 9.15E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene70540 | 0.824514 | 7.75E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene70540 | 0.855354 | 6.68E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene70540 | 0.819503 | 1.12E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene70540 | -0.810466 | 1.14E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene70540 | 0.814812 | 1.27E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene70540 | 0.812085 | 5.06E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene70540 | 0.872533 | 2.96E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene70540 | 0.849596 | 2.92E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene70540 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene70540 | 0.905272 | 5.11E-80 | -1.69E-46 |
| MS.gene055502 | MS.gene70540 | 0.879061 | 1.69E-69 | -1.69E-46 |
| MS.gene055577 | MS.gene70540 | 0.83345 | 5.30E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene70540 | 0.820857 | 5.49E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene70540 | 0.817318 | 3.51E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene70540 | 0.896227 | 4.52E-76 | -1.69E-46 |
| MS.gene055722 | MS.gene70540 | 0.839477 | 1.55E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene70540 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene70540 | 0.843351 | 1.48E-58 | -1.69E-46 |
| MS.gene055956 | MS.gene70540 | -0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene70540 | 0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene70540 | 0.883484 | 4.32E-71 | -1.69E-46 |
| MS.gene056374 | MS.gene70540 | 0.883903 | 3.03E-71 | -1.69E-46 |
| MS.gene056409 | MS.gene70540 | 0.823856 | 1.11E-53 | -1.69E-46 |
| MS.gene056452 | MS.gene70540 | 0.822599 | 2.17E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene70540 | 0.805353 | 1.39E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene70540 | 0.824497 | 7.82E-54 | -1.69E-46 |
| MS.gene056549 | MS.gene70540 | 0.85172 | 7.38E-61 | -1.69E-46 |
| MS.gene056550 | MS.gene70540 | -0.807594 | 4.68E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene70540 | 0.83496 | 2.22E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene70540 | 0.883348 | 4.84E-71 | -1.69E-46 |
| MS.gene056692 | MS.gene70540 | 0.866354 | 3.03E-65 | -1.69E-46 |
| MS.gene057011 | MS.gene70540 | 0.871337 | 7.38E-67 | -1.69E-46 |
| MS.gene057129 | MS.gene70540 | 0.860447 | 2.05E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene70540 | 0.864457 | 1.20E-64 | -1.69E-46 |
| MS.gene057331 | MS.gene70540 | 0.850944 | 1.22E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene70540 | 0.898941 | 3.24E-77 | -1.69E-46 |
| MS.gene057658 | MS.gene70540 | 0.820817 | 5.61E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene70540 | 0.860796 | 1.61E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene70540 | 0.864485 | 1.18E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene70540 | 0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene70540 | 0.855011 | 8.40E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene70540 | 0.834892 | 2.30E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene70540 | 0.881527 | 2.23E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene70540 | 0.87893 | 1.88E-69 | -1.69E-46 |
| MS.gene058660 | MS.gene70540 | 0.837312 | 5.60E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene70540 | 0.813808 | 2.12E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene70540 | 0.858844 | 6.23E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene70540 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene70540 | 0.889978 | 1.49E-73 | -1.69E-46 |
| MS.gene059022 | MS.gene70540 | 0.867095 | 1.76E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene70540 | 0.844752 | 6.22E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene70540 | 0.856182 | 3.82E-62 | -1.69E-46 |
| MS.gene059181 | MS.gene70540 | 0.804186 | 2.44E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene70540 | 0.851542 | 8.29E-61 | -1.69E-46 |
| MS.gene059479 | MS.gene70540 | -0.807666 | 4.52E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene70540 | 0.908875 | 1.06E-81 | -1.69E-46 |
| MS.gene059677 | MS.gene70540 | 0.884428 | 1.93E-71 | -1.69E-46 |
| MS.gene059718 | MS.gene70540 | 0.876318 | 1.54E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene70540 | 0.864332 | 1.31E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene70540 | 0.848548 | 5.71E-60 | -1.69E-46 |
| MS.gene059858 | MS.gene70540 | 0.812133 | 4.94E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene70540 | 0.813231 | 2.84E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene70540 | 0.855062 | 8.12E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene70540 | 0.901527 | 2.45E-78 | -1.69E-46 |
| MS.gene060193 | MS.gene70540 | 0.810592 | 1.07E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene70540 | 0.818261 | 2.15E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene70540 | 0.831198 | 1.91E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene70540 | 0.837771 | 4.27E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene70540 | 0.869673 | 2.60E-66 | -1.69E-46 |
| MS.gene060804 | MS.gene70540 | 0.839226 | 1.80E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene70540 | 0.855466 | 6.19E-62 | -1.69E-46 |
| MS.gene061134 | MS.gene70540 | 0.847228 | 1.32E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene70540 | 0.897688 | 1.10E-76 | -1.69E-46 |
| MS.gene061171 | MS.gene70540 | 0.862986 | 3.43E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene70540 | 0.912086 | 2.91E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70540.t1 | MTR_3g080800 | 91.480 | 223 | 10 | 3 | 1 | 222 | 1 | 215 | 4.72e-137 | 383 |
| MS.gene70540.t1 | MTR_1g060610 | 44.286 | 140 | 75 | 2 | 73 | 209 | 5 | 144 | 3.33e-28 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70540.t1 | AT1G32990 | 79.310 | 203 | 35 | 3 | 20 | 222 | 26 | 221 | 1.04e-104 | 301 |
| MS.gene70540.t1 | AT5G51610 | 52.941 | 170 | 40 | 2 | 51 | 219 | 48 | 178 | 4.01e-46 | 151 |
| MS.gene70540.t1 | AT4G35490 | 46.377 | 138 | 71 | 2 | 75 | 209 | 13 | 150 | 6.69e-31 | 111 |
| MS.gene70540.t1 | AT4G35490 | 46.377 | 138 | 71 | 2 | 75 | 209 | 13 | 150 | 6.69e-31 | 111 |
Find 65 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCTTGCCACCACCGGGTT+TGG | 0.203659 | 3.1:-67538901 | None:intergenic |
| AGCAGGCACAGCGGCAAATA+TGG | 0.212659 | 3.1:+67540809 | MS.gene70540:CDS |
| TTCAAAGGGTGTTAACATTA+TGG | 0.250272 | 3.1:+67539098 | MS.gene70540:CDS |
| GCCTTGCCACCACCGGGTTT+GGG | 0.296743 | 3.1:-67538900 | None:intergenic |
| TGGAGCCGGTGTCGCCTTCC+CGG | 0.342001 | 3.1:-67539055 | None:intergenic |
| CCACCGGTTGGACCGGCTCT+TGG | 0.343636 | 3.1:+67539075 | MS.gene70540:CDS |
| GTTCTACTTCTTAAAGCTGC+TGG | 0.386964 | 3.1:+67539332 | MS.gene70540:CDS |
| TACAACAATTGCTTCTGCTT+GGG | 0.394575 | 3.1:-67540861 | None:intergenic |
| TTGTTGTGTAGGGGTGGAAA+AGG | 0.402114 | 3.1:+67540665 | MS.gene70540:intron |
| TTCAACGGGAATGATATAAC+CGG | 0.425199 | 3.1:-67539160 | None:intergenic |
| TTTCTTGGCCTTGCCACCAC+CGG | 0.430649 | 3.1:-67538907 | None:intergenic |
| TTCTGCTTGGGTTCAAGAAT+AGG | 0.432814 | 3.1:-67540849 | None:intergenic |
| ACCGGCTCCACCGGTTGGAC+CGG | 0.445154 | 3.1:+67539068 | MS.gene70540:CDS |
| AATTGCTTCTGAGAAGTTGC+CGG | 0.445935 | 3.1:+67540746 | MS.gene70540:CDS |
| GCCGGTCCAACCGGTGGAGC+CGG | 0.447208 | 3.1:-67539069 | None:intergenic |
| TGAGTGGTGGGTAGGGAAAG+AGG | 0.454086 | 3.1:-67538834 | None:intergenic |
| TCAATGGCTTCCACTCTCAT+TGG | 0.454304 | 3.1:+67538705 | None:intergenic |
| TTACAACAATTGCTTCTGCT+TGG | 0.457628 | 3.1:-67540862 | None:intergenic |
| ATAAAGCTGGCTCTTGAAGC+CGG | 0.458425 | 3.1:+67539036 | MS.gene70540:CDS |
| GAACCAAGAGCCGGTCCAAC+CGG | 0.467333 | 3.1:-67539078 | None:intergenic |
| TTCTTGGCCTTGCCACCACC+GGG | 0.468969 | 3.1:-67538906 | None:intergenic |
| GCAGGCACAGCGGCAAATAT+GGG | 0.470157 | 3.1:+67540810 | MS.gene70540:CDS |
| TGGACCGGCTCTTGGTTCAA+AGG | 0.470221 | 3.1:+67539083 | MS.gene70540:CDS |
| TCAAAGACAGTGATTTCAAC+GGG | 0.477736 | 3.1:-67539174 | None:intergenic |
| TGTTGTGTAGGGGTGGAAAA+GGG | 0.492679 | 3.1:+67540666 | MS.gene70540:intron |
| GAGTGGTGGGTAGGGAAAGA+GGG | 0.497515 | 3.1:-67538833 | None:intergenic |
| GGACCGGCTCTTGGTTCAAA+GGG | 0.498892 | 3.1:+67539084 | MS.gene70540:CDS |
| TGGAGAATGAGTGGTGGGTA+GGG | 0.504513 | 3.1:-67538841 | None:intergenic |
| ATGAATAACTGAGACTCCAC+TGG | 0.507026 | 3.1:-67538793 | None:intergenic |
| ACCGGGTTTGGGTGGAGCCA+TGG | 0.512574 | 3.1:-67538889 | None:intergenic |
| ACCCAAACCCGGTGGTGGCA+AGG | 0.516417 | 3.1:+67538899 | MS.gene70540:CDS |
| AGTTGAAAACATTGAAGAAG+AGG | 0.519538 | 3.1:-67538748 | None:intergenic |
| TTGGAGAATGAGTGGTGGGT+AGG | 0.522674 | 3.1:-67538842 | None:intergenic |
| TTGCCACCACCGGGTTTGGG+TGG | 0.523478 | 3.1:-67538897 | None:intergenic |
| TAAAGCTGGCTCTTGAAGCC+GGG | 0.523483 | 3.1:+67539037 | MS.gene70540:CDS |
| GAAGGCGACACCGGCTCCAC+CGG | 0.524077 | 3.1:+67539059 | MS.gene70540:CDS |
| GCTCCACCCAAACCCGGTGG+TGG | 0.530005 | 3.1:+67538894 | MS.gene70540:CDS |
| TTAAGAAGTAGAACAGAAGC+AGG | 0.535760 | 3.1:-67539323 | None:intergenic |
| TGAAGCCGGGAAGGCGACAC+CGG | 0.536862 | 3.1:+67539050 | MS.gene70540:CDS |
| ATGGTCTCACAATTCAAGTC+CGG | 0.540025 | 3.1:-67540765 | None:intergenic |
| GCCATGGCTCCACCCAAACC+CGG | 0.560448 | 3.1:+67538888 | MS.gene70540:CDS |
| TGCTTGGGTTCAAGAATAGG+AGG | 0.562010 | 3.1:-67540846 | None:intergenic |
| GGTGGTGGCAAGGCCAAGAA+AGG | 0.566703 | 3.1:+67538909 | MS.gene70540:CDS |
| TGACGGAGCGCCAATGAGAG+TGG | 0.568496 | 3.1:-67538715 | None:intergenic |
| GCGACACCGGCTCCACCGGT+TGG | 0.574069 | 3.1:+67539063 | MS.gene70540:CDS |
| AGTGGTTGGAATCATAAAGC+TGG | 0.577839 | 3.1:+67539023 | MS.gene70540:intron |
| ATCAAAGACAGTGATTTCAA+CGG | 0.578769 | 3.1:-67539175 | None:intergenic |
| CCAAGAGCCGGTCCAACCGG+TGG | 0.580423 | 3.1:-67539075 | None:intergenic |
| TCAACGGGAATGATATAACC+GGG | 0.582949 | 3.1:-67539159 | None:intergenic |
| GCTGGCTCTTGAAGCCGGGA+AGG | 0.585779 | 3.1:+67539041 | MS.gene70540:CDS |
| ACGCTTCAAAATTACTGCCA+TGG | 0.592720 | 3.1:+67538872 | MS.gene70540:CDS |
| TGAGTTGGAGAATGAGTGGT+GGG | 0.593408 | 3.1:-67538846 | None:intergenic |
| ACACCCTTTGAACCAAGAGC+CGG | 0.596971 | 3.1:-67539087 | None:intergenic |
| AATTCTCATAGCTGATTCGA+TGG | 0.598811 | 3.1:-67540784 | None:intergenic |
| TCAGCTATGAGAATTATAGC+AGG | 0.610466 | 3.1:+67540792 | MS.gene70540:CDS |
| AGAAGTAGAACAGAAGCAGG+TGG | 0.625937 | 3.1:-67539320 | None:intergenic |
| TTGAGTTGGAGAATGAGTGG+TGG | 0.628018 | 3.1:-67538847 | None:intergenic |
| AAAGGGTTCAAAAGACCCCA+AGG | 0.645242 | 3.1:+67540683 | MS.gene70540:CDS |
| GAAGAGGAAGAACAAAGTGA+CGG | 0.645831 | 3.1:-67538732 | None:intergenic |
| GCTAGAACTGCTGATAAACC+CGG | 0.652419 | 3.1:+67539141 | MS.gene70540:CDS |
| TGAATAACTGAGACTCCACT+GGG | 0.661810 | 3.1:-67538792 | None:intergenic |
| ATGGCTCCACCCAAACCCGG+TGG | 0.681058 | 3.1:+67538891 | MS.gene70540:CDS |
| TCTTTGAGTTGGAGAATGAG+TGG | 0.685546 | 3.1:-67538850 | None:intergenic |
| AAATTATCGTTAAAACCCAG+TGG | 0.702152 | 3.1:+67538777 | MS.gene70540:CDS |
| GAGAATTATAGCAGGCACAG+CGG | 0.702772 | 3.1:+67540800 | MS.gene70540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACATAACATAATATCAA+AGG | - | chr3.1:67539364-67539383 | None:intergenic | 15.0% |
| !! | TAACATAACATAATATCAAA+GGG | - | chr3.1:67539363-67539382 | None:intergenic | 15.0% |
| !! | TGAACTATATTAAAATTGTT+AGG | + | chr3.1:67539938-67539957 | MS.gene70540:intron | 15.0% |
| !! | AACATAACATAATATCAAAG+GGG | - | chr3.1:67539362-67539381 | None:intergenic | 20.0% |
| !! | AGTTGTAATATATGAAACAT+AGG | + | chr3.1:67539486-67539505 | MS.gene70540:intron | 20.0% |
| !! | ATGTAATAGACTTTATAGTT+GGG | + | chr3.1:67540420-67540439 | MS.gene70540:intron | 20.0% |
| !! | ATTCTAACAAATTATATCAC+AGG | - | chr3.1:67539394-67539413 | None:intergenic | 20.0% |
| !! | CATACTGTATAAAAAAAATC+AGG | - | chr3.1:67540403-67540422 | None:intergenic | 20.0% |
| !! | TATGTAATAGACTTTATAGT+TGG | + | chr3.1:67540419-67540438 | MS.gene70540:intron | 20.0% |
| !!! | TATTTTGTTGTGTTATTTTC+AGG | + | chr3.1:67539268-67539287 | MS.gene70540:intron | 20.0% |
| ! | AAAAAAAATCAGGTACAGAA+AGG | - | chr3.1:67540393-67540412 | None:intergenic | 25.0% |
| ! | AAATTGAATCACAGAGTAAA+CGG | - | chr3.1:67540039-67540058 | None:intergenic | 25.0% |
| ! | AAGATAGTAGCAGAAAATAT+TGG | + | chr3.1:67540450-67540469 | MS.gene70540:intron | 25.0% |
| ! | AATGAAATATAGCAATGACT+AGG | - | chr3.1:67539796-67539815 | None:intergenic | 25.0% |
| ! | AGATAGTAGCAGAAAATATT+GGG | + | chr3.1:67540451-67540470 | MS.gene70540:intron | 25.0% |
| ! | AGGATCATTGAAACTTAAAT+AGG | + | chr3.1:67539861-67539880 | MS.gene70540:intron | 25.0% |
| ! | ATGAAATATAGCAATGACTA+GGG | - | chr3.1:67539795-67539814 | None:intergenic | 25.0% |
| ! | ATTAAAACACCTAGTAAACA+GGG | - | chr3.1:67540317-67540336 | None:intergenic | 25.0% |
| ! | ATTGAAACTTAAATAGGGTA+AGG | + | chr3.1:67539867-67539886 | MS.gene70540:intron | 25.0% |
| ! | CTAAATATCCAATATCAGTA+TGG | - | chr3.1:67539967-67539986 | None:intergenic | 25.0% |
| ! | GGATCATTGAAACTTAAATA+GGG | + | chr3.1:67539862-67539881 | MS.gene70540:intron | 25.0% |
| !! | CACAGTATTTTACATATCAT+TGG | - | chr3.1:67540189-67540208 | None:intergenic | 25.0% |
| !! | CTGTCATTAATTTAGAGTTA+AGG | + | chr3.1:67539841-67539860 | MS.gene70540:intron | 25.0% |
| !! | TTACAACATGTTTGTGTTTT+TGG | + | chr3.1:67538995-67539014 | MS.gene70540:intron | 25.0% |
| !!! | ATGATCTATTTGTTTTAAGC+TGG | + | chr3.1:67540066-67540085 | MS.gene70540:intron | 25.0% |
| !!! | TATTGGTTTGATAGATTATC+AGG | + | chr3.1:67540565-67540584 | MS.gene70540:intron | 25.0% |
| AAAACGAAGCAGATATGTTA+AGG | + | chr3.1:67540541-67540560 | MS.gene70540:intron | 30.0% | |
| AAATTATCGTTAAAACCCAG+TGG | + | chr3.1:67538777-67538796 | MS.gene70540:CDS | 30.0% | |
| AGCAGATATGTTAAGGTTAT+TGG | + | chr3.1:67540548-67540567 | MS.gene70540:intron | 30.0% | |
| AGTTGAAAACATTGAAGAAG+AGG | - | chr3.1:67538751-67538770 | None:intergenic | 30.0% | |
| ATACCTTCAGTATAAAGTGT+CGG | + | chr3.1:67539650-67539669 | MS.gene70540:intron | 30.0% | |
| ATATAGTTCACTTAGTTGCA+AGG | - | chr3.1:67539928-67539947 | None:intergenic | 30.0% | |
| ATCAAAGACAGTGATTTCAA+CGG | - | chr3.1:67539178-67539197 | None:intergenic | 30.0% | |
| ATTAGTCATTAGCTGGAATT+TGG | + | chr3.1:67539754-67539773 | MS.gene70540:intron | 30.0% | |
| ATTTACTAGAGATGCATTAG+TGG | - | chr3.1:67539446-67539465 | None:intergenic | 30.0% | |
| CATTAAAACACCTAGTAAAC+AGG | - | chr3.1:67540318-67540337 | None:intergenic | 30.0% | |
| CTCTAAATTAATGACAGTTG+AGG | - | chr3.1:67539838-67539857 | None:intergenic | 30.0% | |
| GAAAGTTATTAGTCATTAGC+TGG | + | chr3.1:67539747-67539766 | MS.gene70540:intron | 30.0% | |
| GCTAACTATAAGACACTATT+GGG | + | chr3.1:67539690-67539709 | MS.gene70540:intron | 30.0% | |
| TCCAAACTCTATTATACTGA+TGG | + | chr3.1:67540636-67540655 | MS.gene70540:intron | 30.0% | |
| TCCATCAGTATAATAGAGTT+TGG | - | chr3.1:67540640-67540659 | None:intergenic | 30.0% | |
| TGATTGTTGTATGTAATGAC+TGG | + | chr3.1:67539577-67539596 | MS.gene70540:intron | 30.0% | |
| TTAAAACACCTAGTAAACAG+GGG | - | chr3.1:67540316-67540335 | None:intergenic | 30.0% | |
| TTTAAGCTGGATCTAATCAA+GGG | + | chr3.1:67540079-67540098 | MS.gene70540:intron | 30.0% | |
| ! | CTAGTAAATTAGCCTGTTAT+TGG | + | chr3.1:67539457-67539476 | MS.gene70540:intron | 30.0% |
| ! | TTTTAAGCTGGATCTAATCA+AGG | + | chr3.1:67540078-67540097 | MS.gene70540:intron | 30.0% |
| !! | CTGTTTACTAGGTGTTTTAA+TGG | + | chr3.1:67540316-67540335 | MS.gene70540:intron | 30.0% |
| !! | TTCAAAGGGTGTTAACATTA+TGG | + | chr3.1:67539098-67539117 | MS.gene70540:CDS | 30.0% |
| !!! | AAGGTAAGTTTTGTTCAAGA+TGG | - | chr3.1:67540374-67540393 | None:intergenic | 30.0% |
| !!! | AGGGAATGAGATTTTTTTAG+TGG | + | chr3.1:67540241-67540260 | MS.gene70540:intron | 30.0% |
| !!! | AGGTAAGTTTTGTTCAAGAT+GGG | - | chr3.1:67540373-67540392 | None:intergenic | 30.0% |
| !!! | GAAGTTGTTTTTACCTTTCT+TGG | - | chr3.1:67538925-67538944 | None:intergenic | 30.0% |
| !!! | TTACTAGGTGTTTTAATGGA+TGG | + | chr3.1:67540320-67540339 | MS.gene70540:intron | 30.0% |
| !!! | TTTTTTAGTGGTTACATTCG+AGG | + | chr3.1:67540253-67540272 | MS.gene70540:intron | 30.0% |
| AAATTAATGACAGTTGAGGC+AGG | - | chr3.1:67539834-67539853 | None:intergenic | 35.0% | |
| ACAACTTGTAGACCAATAAC+AGG | - | chr3.1:67539472-67539491 | None:intergenic | 35.0% | |
| ACTATAAGACACTATTGGGT+CGG | + | chr3.1:67539694-67539713 | MS.gene70540:intron | 35.0% | |
| AGAATTTCTCCTACACTACA+AGG | + | chr3.1:67540221-67540240 | MS.gene70540:intron | 35.0% | |
| GAATTTCTCCTACACTACAA+GGG | + | chr3.1:67540222-67540241 | MS.gene70540:intron | 35.0% | |
| GGCTAACTATAAGACACTAT+TGG | + | chr3.1:67539689-67539708 | MS.gene70540:intron | 35.0% | |
| GTCTTGAAATATGATCAGTC+TGG | + | chr3.1:67540493-67540512 | MS.gene70540:intron | 35.0% | |
| TACAACAATTGCTTCTGCTT+GGG | - | chr3.1:67540864-67540883 | None:intergenic | 35.0% | |
| TACCATAGTCTATATAGTGC+CGG | - | chr3.1:67539537-67539556 | None:intergenic | 35.0% | |
| TCAAAGACAGTGATTTCAAC+GGG | - | chr3.1:67539177-67539196 | None:intergenic | 35.0% | |
| TCAGCTATGAGAATTATAGC+AGG | + | chr3.1:67540792-67540811 | MS.gene70540:CDS | 35.0% | |
| TTAAGAAGTAGAACAGAAGC+AGG | - | chr3.1:67539326-67539345 | None:intergenic | 35.0% | |
| TTACAACAATTGCTTCTGCT+TGG | - | chr3.1:67540865-67540884 | None:intergenic | 35.0% | |
| TTAGGCATCCATACTGATAT+TGG | + | chr3.1:67539956-67539975 | MS.gene70540:intron | 35.0% | |
| TTCAACGGGAATGATATAAC+CGG | - | chr3.1:67539163-67539182 | None:intergenic | 35.0% | |
| ! | AAAGAGGGTTTTTGTGTTCA+AGG | - | chr3.1:67538821-67538840 | None:intergenic | 35.0% |
| ! | AAGAGGGTTTTTGTGTTCAA+GGG | - | chr3.1:67538820-67538839 | None:intergenic | 35.0% |
| ! | ACATTCGAGGTATTCTTACA+AGG | + | chr3.1:67540266-67540285 | MS.gene70540:intron | 35.0% |
| ! | TCAAGATGGGGAGATTTTAA+TGG | - | chr3.1:67540360-67540379 | None:intergenic | 35.0% |
| !! | AATTCTCATAGCTGATTCGA+TGG | - | chr3.1:67540787-67540806 | None:intergenic | 35.0% |
| !! | ATGGACTGATTTGTTGTGTA+GGG | + | chr3.1:67540655-67540674 | MS.gene70540:intron | 35.0% |
| !!! | ATTTTGAAGCGTCTTTGAGT+TGG | - | chr3.1:67538864-67538883 | None:intergenic | 35.0% |
| !!! | GGTAAGTTTTGTTCAAGATG+GGG | - | chr3.1:67540372-67540391 | None:intergenic | 35.0% |
| !!! | TTTCCTACTTTTTGTGCCTT+GGG | - | chr3.1:67540702-67540721 | None:intergenic | 35.0% |
| !!! | TTTGTGTTTTTGGCAAACAG+TGG | + | chr3.1:67539005-67539024 | MS.gene70540:intron | 35.0% |
| !!! | TTTTCCTACTTTTTGTGCCT+TGG | - | chr3.1:67540703-67540722 | None:intergenic | 35.0% |
| AAGGCTACATCCACTACTTA+TGG | + | chr3.1:67540285-67540304 | MS.gene70540:intron | 40.0% | |
| ACGCTTCAAAATTACTGCCA+TGG | + | chr3.1:67538872-67538891 | MS.gene70540:CDS | 40.0% | |
| AGATTCACTCGTAAACAGGA+TGG | - | chr3.1:67540604-67540623 | None:intergenic | 40.0% | |
| AGTGGTTGGAATCATAAAGC+TGG | + | chr3.1:67539023-67539042 | MS.gene70540:intron | 40.0% | |
| ATCTCATTCCCTTGTAGTGT+AGG | - | chr3.1:67540233-67540252 | None:intergenic | 40.0% | |
| ATGAATAACTGAGACTCCAC+TGG | - | chr3.1:67538796-67538815 | None:intergenic | 40.0% | |
| ATGGTCTCACAATTCAAGTC+CGG | - | chr3.1:67540768-67540787 | None:intergenic | 40.0% | |
| CACTAGATTCACTCGTAAAC+AGG | - | chr3.1:67540608-67540627 | None:intergenic | 40.0% | |
| GAAGAGGAAGAACAAAGTGA+CGG | - | chr3.1:67538735-67538754 | None:intergenic | 40.0% | |
| GTTCTACTTCTTAAAGCTGC+TGG | + | chr3.1:67539332-67539351 | MS.gene70540:CDS | 40.0% | |
| TCAACGGGAATGATATAACC+GGG | - | chr3.1:67539162-67539181 | None:intergenic | 40.0% | |
| TGAATAACTGAGACTCCACT+GGG | - | chr3.1:67538795-67538814 | None:intergenic | 40.0% | |
| TTCTGCTTGGGTTCAAGAAT+AGG | - | chr3.1:67540852-67540871 | None:intergenic | 40.0% | |
| ! | AATTGCTTCTGAGAAGTTGC+CGG | + | chr3.1:67540746-67540765 | MS.gene70540:CDS | 40.0% |
| ! | CTGAAGGTATGTCCAAGTAT+TGG | - | chr3.1:67539640-67539659 | None:intergenic | 40.0% |
| !! | GATGGACTGATTTGTTGTGT+AGG | + | chr3.1:67540654-67540673 | MS.gene70540:intron | 40.0% |
| !! | TCTTTGAGTTGGAGAATGAG+TGG | - | chr3.1:67538853-67538872 | None:intergenic | 40.0% |
| !! | TGGACTGATTTGTTGTGTAG+GGG | + | chr3.1:67540656-67540675 | MS.gene70540:intron | 40.0% |
| !!! | TGTTTTTGGCAAACAGTGGT+TGG | + | chr3.1:67539009-67539028 | MS.gene70540:intron | 40.0% |
| !!! | TTCCTACTTTTTGTGCCTTG+GGG | - | chr3.1:67540701-67540720 | None:intergenic | 40.0% |
| AAAGGGTTCAAAAGACCCCA+AGG | + | chr3.1:67540683-67540702 | MS.gene70540:CDS | 45.0% | |
| AGAAGTAGAACAGAAGCAGG+TGG | - | chr3.1:67539323-67539342 | None:intergenic | 45.0% | |
| AGGGGTTCAACCATAAGTAG+TGG | - | chr3.1:67540298-67540317 | None:intergenic | 45.0% | |
| CACCGGCACTATATAGACTA+TGG | + | chr3.1:67539532-67539551 | MS.gene70540:intron | 45.0% | |
| GAGAATTATAGCAGGCACAG+CGG | + | chr3.1:67540800-67540819 | MS.gene70540:CDS | 45.0% | |
| GCTAGAACTGCTGATAAACC+CGG | + | chr3.1:67539141-67539160 | MS.gene70540:CDS | 45.0% | |
| TAATGACAGTTGAGGCAGGA+AGG | - | chr3.1:67539830-67539849 | None:intergenic | 45.0% | |
| TGCTTGGGTTCAAGAATAGG+AGG | - | chr3.1:67540849-67540868 | None:intergenic | 45.0% | |
| TGGTTGAACCCCTGTTTACT+AGG | + | chr3.1:67540305-67540324 | MS.gene70540:intron | 45.0% | |
| TGTTGTGTAGGGGTGGAAAA+GGG | + | chr3.1:67540666-67540685 | MS.gene70540:intron | 45.0% | |
| TTGTTGTGTAGGGGTGGAAA+AGG | + | chr3.1:67540665-67540684 | MS.gene70540:intron | 45.0% | |
| ! | ATAAAGCTGGCTCTTGAAGC+CGG | + | chr3.1:67539036-67539055 | MS.gene70540:CDS | 45.0% |
| ! | GCACCGACACTTTATACTGA+AGG | - | chr3.1:67539656-67539675 | None:intergenic | 45.0% |
| ! | TGAGTTGGAGAATGAGTGGT+GGG | - | chr3.1:67538849-67538868 | None:intergenic | 45.0% |
| !! | ACTGATTTGTTGTGTAGGGG+TGG | + | chr3.1:67540659-67540678 | MS.gene70540:intron | 45.0% |
| !! | TCCAAGTATTGGACACGTGT+CGG | - | chr3.1:67539629-67539648 | None:intergenic | 45.0% |
| !! | TTGAGTTGGAGAATGAGTGG+TGG | - | chr3.1:67538850-67538869 | None:intergenic | 45.0% |
| ACACCCTTTGAACCAAGAGC+CGG | - | chr3.1:67539090-67539109 | None:intergenic | 50.0% | |
| ACCGACACGTGTCCAATACT+TGG | + | chr3.1:67539625-67539644 | MS.gene70540:intron | 50.0% | |
| CACTATTGGGTCGGCATGTT+TGG | + | chr3.1:67539703-67539722 | MS.gene70540:intron | 50.0% | |
| CATAGGCACCACACTAGATG+CGG | + | chr3.1:67539503-67539522 | MS.gene70540:intron | 50.0% | |
| GACCCCAAGGCACAAAAAGT+AGG | + | chr3.1:67540696-67540715 | MS.gene70540:CDS | 50.0% | |
| ! | TAAAGCTGGCTCTTGAAGCC+GGG | + | chr3.1:67539037-67539056 | MS.gene70540:CDS | 50.0% |
| !! | GTCGGTGCTACGTACTTGTA+AGG | + | chr3.1:67539668-67539687 | MS.gene70540:intron | 50.0% |
| !! | TGGAGAATGAGTGGTGGGTA+GGG | - | chr3.1:67538844-67538863 | None:intergenic | 50.0% |
| !! | TTGGAGAATGAGTGGTGGGT+AGG | - | chr3.1:67538845-67538864 | None:intergenic | 50.0% |
| ACTAGATGCGGACACGACAC+CGG | + | chr3.1:67539515-67539534 | MS.gene70540:intron | 55.0% | |
| AGCAGGCACAGCGGCAAATA+TGG | + | chr3.1:67540809-67540828 | MS.gene70540:CDS | 55.0% | |
| GCAGGCACAGCGGCAAATAT+GGG | + | chr3.1:67540810-67540829 | MS.gene70540:CDS | 55.0% | |
| TGACAGTTGAGGCAGGAAGG+AGG | - | chr3.1:67539827-67539846 | None:intergenic | 55.0% | |
| TGTCGTGTCCGCATCTAGTG+TGG | - | chr3.1:67539514-67539533 | None:intergenic | 55.0% | |
| ! | GGACCGGCTCTTGGTTCAAA+GGG | + | chr3.1:67539084-67539103 | MS.gene70540:CDS | 55.0% |
| ! | TGGACCGGCTCTTGGTTCAA+AGG | + | chr3.1:67539083-67539102 | MS.gene70540:CDS | 55.0% |
| !! | GAGTGGTGGGTAGGGAAAGA+GGG | - | chr3.1:67538836-67538855 | None:intergenic | 55.0% |
| !! | TGAGTGGTGGGTAGGGAAAG+AGG | - | chr3.1:67538837-67538856 | None:intergenic | 55.0% |
| !! | TTTCTTGGCCTTGCCACCAC+CGG | - | chr3.1:67538910-67538929 | None:intergenic | 55.0% |
| GAACCAAGAGCCGGTCCAAC+CGG | - | chr3.1:67539081-67539100 | None:intergenic | 60.0% | |
| ! | GGTGGTGGCAAGGCCAAGAA+AGG | + | chr3.1:67538909-67538928 | MS.gene70540:CDS | 60.0% |
| ! | TGACGGAGCGCCAATGAGAG+TGG | - | chr3.1:67538718-67538737 | None:intergenic | 60.0% |
| !! | TTCTTGGCCTTGCCACCACC+GGG | - | chr3.1:67538909-67538928 | None:intergenic | 60.0% |
| ACCGGGTTTGGGTGGAGCCA+TGG | - | chr3.1:67538892-67538911 | None:intergenic | 65.0% | |
| ATGGCTCCACCCAAACCCGG+TGG | + | chr3.1:67538891-67538910 | MS.gene70540:CDS | 65.0% | |
| GCCATGGCTCCACCCAAACC+CGG | + | chr3.1:67538888-67538907 | MS.gene70540:CDS | 65.0% | |
| GCCTTGCCACCACCGGGTTT+GGG | - | chr3.1:67538903-67538922 | None:intergenic | 65.0% | |
| GGGTCGGCATGTTTGGCCAG+CGG | + | chr3.1:67539710-67539729 | MS.gene70540:intron | 65.0% | |
| TCGCAGTGCGTAGTTGCCGC+TGG | - | chr3.1:67539729-67539748 | None:intergenic | 65.0% | |
| TGAAGCCGGGAAGGCGACAC+CGG | + | chr3.1:67539050-67539069 | MS.gene70540:CDS | 65.0% | |
| TTGCCACCACCGGGTTTGGG+TGG | - | chr3.1:67538900-67538919 | None:intergenic | 65.0% | |
| ! | ACCCAAACCCGGTGGTGGCA+AGG | + | chr3.1:67538899-67538918 | MS.gene70540:CDS | 65.0% |
| ! | GCTGGCTCTTGAAGCCGGGA+AGG | + | chr3.1:67539041-67539060 | MS.gene70540:CDS | 65.0% |
| CCAAGAGCCGGTCCAACCGG+TGG | - | chr3.1:67539078-67539097 | None:intergenic | 70.0% | |
| GCTCCACCCAAACCCGGTGG+TGG | + | chr3.1:67538894-67538913 | MS.gene70540:CDS | 70.0% | |
| GGCCTTGCCACCACCGGGTT+TGG | - | chr3.1:67538904-67538923 | None:intergenic | 70.0% | |
| ! | ACCGGCTCCACCGGTTGGAC+CGG | + | chr3.1:67539068-67539087 | MS.gene70540:CDS | 70.0% |
| ! | CCACCGGTTGGACCGGCTCT+TGG | + | chr3.1:67539075-67539094 | MS.gene70540:CDS | 70.0% |
| !! | GAAGGCGACACCGGCTCCAC+CGG | + | chr3.1:67539059-67539078 | MS.gene70540:CDS | 70.0% |
| !! | TGGAGCCGGTGTCGCCTTCC+CGG | - | chr3.1:67539058-67539077 | None:intergenic | 70.0% |
| GCCGGTCCAACCGGTGGAGC+CGG | - | chr3.1:67539072-67539091 | None:intergenic | 75.0% | |
| !! | GCGACACCGGCTCCACCGGT+TGG | + | chr3.1:67539063-67539082 | MS.gene70540:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 67538708 | 67540884 | 67538708 | ID=MS.gene70540 |
| chr3.1 | mRNA | 67538708 | 67540884 | 67538708 | ID=MS.gene70540.t1;Parent=MS.gene70540 |
| chr3.1 | exon | 67538708 | 67538930 | 67538708 | ID=MS.gene70540.t1.exon1;Parent=MS.gene70540.t1 |
| chr3.1 | CDS | 67538708 | 67538930 | 67538708 | ID=cds.MS.gene70540.t1;Parent=MS.gene70540.t1 |
| chr3.1 | exon | 67539025 | 67539197 | 67539025 | ID=MS.gene70540.t1.exon2;Parent=MS.gene70540.t1 |
| chr3.1 | CDS | 67539025 | 67539197 | 67539025 | ID=cds.MS.gene70540.t1;Parent=MS.gene70540.t1 |
| chr3.1 | exon | 67539290 | 67539353 | 67539290 | ID=MS.gene70540.t1.exon3;Parent=MS.gene70540.t1 |
| chr3.1 | CDS | 67539290 | 67539353 | 67539290 | ID=cds.MS.gene70540.t1;Parent=MS.gene70540.t1 |
| chr3.1 | exon | 67540676 | 67540884 | 67540676 | ID=MS.gene70540.t1.exon4;Parent=MS.gene70540.t1 |
| chr3.1 | CDS | 67540676 | 67540884 | 67540676 | ID=cds.MS.gene70540.t1;Parent=MS.gene70540.t1 |
| Gene Sequence |
| Protein sequence |
