Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92659.t1 | XP_013459230.1 | 94.4 | 391 | 21 | 1 | 1 | 390 | 1 | 391 | 1.00E-177 | 632.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92659.t1 | Q94CJ5 | 62.8 | 277 | 101 | 1 | 113 | 387 | 108 | 384 | 3.1e-95 | 350.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92659.t1 | A0A072UV54 | 94.4 | 391 | 21 | 1 | 1 | 390 | 1 | 391 | 7.2e-178 | 632.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92659 | 0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene92659 | 0.836641 | 8.31E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene92659 | 0.840676 | 7.53E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene92659 | 0.813332 | 2.70E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene92659 | 0.819519 | 1.11E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene92659 | 0.809283 | 2.04E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene92659 | 0.814882 | 1.23E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene92659 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene92659 | 0.813027 | 3.15E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene92659 | 0.851937 | 6.41E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene92659 | 0.805859 | 1.09E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene92659 | 0.825074 | 5.71E-54 | -1.69E-46 |
| MS.gene049614 | MS.gene92659 | 0.836339 | 9.91E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene92659 | 0.85663 | 2.83E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene92659 | 0.856052 | 4.17E-62 | -1.69E-46 |
| MS.gene049760 | MS.gene92659 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene92659 | 0.823037 | 1.72E-53 | -1.69E-46 |
| MS.gene049828 | MS.gene92659 | 0.822652 | 2.11E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene92659 | 0.839895 | 1.21E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene92659 | 0.834999 | 2.17E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene92659 | 0.821242 | 4.48E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene92659 | 0.817382 | 3.39E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene92659 | 0.823703 | 1.20E-53 | -1.69E-46 |
| MS.gene050404 | MS.gene92659 | 0.806244 | 9.04E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene92659 | 0.84783 | 9.02E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene92659 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene92659 | 0.824786 | 6.68E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene92659 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene92659 | 0.883025 | 6.36E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene92659 | 0.887747 | 1.09E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene92659 | 0.851904 | 6.55E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene92659 | 0.806868 | 6.67E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene92659 | 0.811776 | 5.91E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene92659 | 0.82268 | 2.08E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene92659 | 0.828136 | 1.06E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene92659 | 0.871347 | 7.33E-67 | -1.69E-46 |
| MS.gene051228 | MS.gene92659 | 0.869917 | 2.16E-66 | -1.69E-46 |
| MS.gene051387 | MS.gene92659 | 0.802009 | 6.87E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene92659 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene92659 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene92659 | 0.817596 | 3.04E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene92659 | 0.847839 | 8.97E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene92659 | 0.852718 | 3.84E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene92659 | 0.841677 | 4.11E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene92659 | 0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene92659 | 0.839027 | 2.03E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene92659 | 0.842235 | 2.93E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene92659 | 0.8509 | 1.26E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene92659 | 0.899841 | 1.33E-77 | -1.69E-46 |
| MS.gene052293 | MS.gene92659 | 0.817394 | 3.37E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene92659 | 0.862798 | 3.93E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene92659 | 0.812333 | 4.47E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene92659 | 0.831394 | 1.71E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene92659 | 0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene92659 | 0.874332 | 7.34E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene92659 | 0.832788 | 7.74E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene92659 | 0.830105 | 3.54E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene92659 | 0.812091 | 5.05E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene92659 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene052670 | MS.gene92659 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene92659 | 0.831178 | 1.93E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene92659 | 0.822531 | 2.25E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene92659 | 0.896544 | 3.33E-76 | -1.69E-46 |
| MS.gene053103 | MS.gene92659 | 0.849793 | 2.57E-60 | -1.69E-46 |
| MS.gene053104 | MS.gene92659 | 0.855608 | 5.63E-62 | -1.69E-46 |
| MS.gene053207 | MS.gene92659 | 0.839467 | 1.56E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene92659 | 0.860594 | 1.85E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene92659 | 0.817216 | 3.70E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene92659 | 0.807618 | 4.63E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene92659 | 0.875239 | 3.60E-68 | -1.69E-46 |
| MS.gene053384 | MS.gene92659 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene92659 | 0.808748 | 2.66E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene92659 | 0.855519 | 5.97E-62 | -1.69E-46 |
| MS.gene053915 | MS.gene92659 | 0.810506 | 1.11E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene92659 | 0.832101 | 1.15E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene92659 | 0.81904 | 1.43E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene92659 | 0.863492 | 2.40E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene92659 | 0.824791 | 6.67E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene92659 | 0.848018 | 8.01E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene92659 | 0.836614 | 8.44E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene92659 | 0.83876 | 2.37E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene92659 | 0.839945 | 1.17E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene92659 | 0.857125 | 2.02E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene92659 | 0.826982 | 2.01E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene92659 | 0.82685 | 2.16E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene92659 | 0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene92659 | 0.885214 | 9.86E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene92659 | 0.826949 | 2.05E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene92659 | 0.877042 | 8.62E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene92659 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene92659 | 0.877383 | 6.57E-69 | -1.69E-46 |
| MS.gene055636 | MS.gene92659 | 0.803895 | 2.80E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene92659 | 0.802722 | 4.90E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene92659 | 0.817345 | 3.46E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene92659 | 0.8449 | 5.68E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene92659 | 0.855897 | 4.63E-62 | -1.69E-46 |
| MS.gene05602 | MS.gene92659 | 0.820092 | 8.23E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene92659 | 0.822703 | 2.06E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene92659 | 0.840173 | 1.02E-57 | -1.69E-46 |
| MS.gene056449 | MS.gene92659 | 0.839717 | 1.34E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene92659 | 0.804849 | 1.77E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene92659 | 0.870847 | 1.07E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene92659 | 0.821432 | 4.05E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene92659 | 0.813216 | 2.86E-51 | -1.69E-46 |
| MS.gene056719 | MS.gene92659 | 0.829855 | 4.07E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene92659 | 0.817601 | 3.03E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene92659 | 0.852659 | 3.99E-61 | -1.69E-46 |
| MS.gene056903 | MS.gene92659 | 0.82562 | 4.24E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene92659 | 0.827291 | 1.70E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene92659 | 0.818009 | 2.45E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene92659 | 0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene92659 | 0.895002 | 1.45E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene92659 | 0.830486 | 2.86E-55 | -1.69E-46 |
| MS.gene057246 | MS.gene92659 | 0.806898 | 6.58E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene92659 | 0.823409 | 1.41E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene92659 | 0.818362 | 2.04E-52 | -1.69E-46 |
| MS.gene05733 | MS.gene92659 | 0.806753 | 7.06E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene92659 | 0.829117 | 6.16E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene92659 | 0.832703 | 8.12E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene92659 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene92659 | 0.811297 | 7.51E-51 | -1.69E-46 |
| MS.gene058082 | MS.gene92659 | 0.8759 | 2.14E-68 | -1.69E-46 |
| MS.gene058130 | MS.gene92659 | 0.825371 | 4.86E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene92659 | 0.809769 | 1.61E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene92659 | 0.847321 | 1.24E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene92659 | 0.810079 | 1.38E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene92659 | 0.835149 | 1.98E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene92659 | 0.824682 | 7.07E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene92659 | 0.860991 | 1.40E-63 | -1.69E-46 |
| MS.gene058723 | MS.gene92659 | 0.870459 | 1.44E-66 | -1.69E-46 |
| MS.gene058748 | MS.gene92659 | 0.842803 | 2.07E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene92659 | 0.832301 | 1.02E-55 | -1.69E-46 |
| MS.gene058787 | MS.gene92659 | 0.821264 | 4.43E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene92659 | 0.857038 | 2.14E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene92659 | 0.82142 | 4.08E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene92659 | 0.83194 | 1.26E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene92659 | 0.846554 | 2.02E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene92659 | 0.819121 | 1.37E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene92659 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene92659 | 0.84656 | 2.01E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene92659 | 0.822829 | 1.92E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene92659 | 0.868098 | 8.41E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene92659 | 0.881929 | 1.59E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene92659 | 0.876563 | 1.26E-68 | -1.69E-46 |
| MS.gene059708 | MS.gene92659 | 0.818366 | 2.04E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene92659 | 0.842673 | 2.24E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene92659 | 0.828062 | 1.11E-54 | -1.69E-46 |
| MS.gene059858 | MS.gene92659 | 0.825887 | 3.67E-54 | -1.69E-46 |
| MS.gene05986 | MS.gene92659 | 0.820803 | 5.65E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene92659 | 0.803859 | 2.85E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene92659 | 0.8388 | 2.32E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene92659 | 0.885126 | 1.06E-71 | -1.69E-46 |
| MS.gene059974 | MS.gene92659 | 0.818595 | 1.81E-52 | -1.69E-46 |
| MS.gene060341 | MS.gene92659 | 0.805474 | 1.31E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene92659 | 0.863127 | 3.11E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene92659 | 0.852552 | 4.28E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene92659 | 0.80712 | 5.90E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene92659 | 0.817031 | 4.07E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene92659 | 0.858726 | 6.76E-63 | -1.69E-46 |
| MS.gene061049 | MS.gene92659 | 0.810659 | 1.03E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene92659 | -0.820791 | 5.69E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene92659 | 0.815468 | 9.11E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene92659 | 0.877672 | 5.21E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92659.t1 | MTR_3g033620 | 92.327 | 391 | 29 | 1 | 1 | 390 | 1 | 391 | 0.0 | 644 |
| MS.gene92659.t1 | MTR_0013s0150 | 75.779 | 289 | 68 | 1 | 103 | 389 | 92 | 380 | 2.43e-162 | 461 |
| MS.gene92659.t1 | MTR_4g077000 | 64.643 | 280 | 97 | 1 | 109 | 386 | 109 | 388 | 8.18e-132 | 383 |
| MS.gene92659.t1 | MTR_3g071970 | 35.593 | 295 | 171 | 6 | 106 | 386 | 427 | 716 | 8.58e-50 | 179 |
| MS.gene92659.t1 | MTR_2g084605 | 27.208 | 283 | 193 | 5 | 113 | 386 | 114 | 392 | 9.03e-30 | 119 |
| MS.gene92659.t1 | MTR_7g064130 | 29.210 | 291 | 185 | 8 | 111 | 386 | 164 | 448 | 2.52e-25 | 107 |
| MS.gene92659.t1 | MTR_7g074090 | 28.879 | 232 | 150 | 5 | 158 | 387 | 90 | 308 | 2.48e-22 | 97.1 |
| MS.gene92659.t1 | MTR_7g074090 | 28.879 | 232 | 150 | 5 | 158 | 387 | 90 | 308 | 1.30e-21 | 95.5 |
| MS.gene92659.t1 | MTR_7g074090 | 28.879 | 232 | 150 | 5 | 158 | 387 | 108 | 326 | 1.87e-21 | 95.5 |
| MS.gene92659.t1 | MTR_7g074070 | 29.437 | 231 | 148 | 5 | 158 | 386 | 101 | 318 | 1.22e-19 | 89.7 |
| MS.gene92659.t1 | MTR_2g081000 | 24.786 | 234 | 163 | 3 | 113 | 339 | 181 | 408 | 1.74e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92659.t1 | AT5G12470 | 63.668 | 289 | 103 | 1 | 101 | 387 | 96 | 384 | 1.15e-135 | 393 |
| MS.gene92659.t1 | AT3G56140 | 36.455 | 299 | 171 | 6 | 106 | 390 | 200 | 493 | 2.58e-53 | 185 |
| MS.gene92659.t1 | AT2G40400 | 37.124 | 299 | 169 | 6 | 106 | 390 | 410 | 703 | 1.97e-52 | 186 |
| MS.gene92659.t1 | AT2G40400 | 37.124 | 299 | 169 | 6 | 106 | 390 | 410 | 703 | 1.97e-52 | 186 |
| MS.gene92659.t1 | AT3G56140 | 36.455 | 299 | 171 | 6 | 106 | 390 | 419 | 712 | 5.03e-52 | 185 |
| MS.gene92659.t1 | AT3G56140 | 36.455 | 299 | 171 | 6 | 106 | 390 | 419 | 712 | 5.03e-52 | 185 |
| MS.gene92659.t1 | AT2G40400 | 36.735 | 245 | 137 | 5 | 106 | 336 | 410 | 650 | 1.42e-37 | 144 |
| MS.gene92659.t1 | AT5G22790 | 27.875 | 287 | 187 | 7 | 113 | 386 | 154 | 433 | 4.55e-27 | 112 |
| MS.gene92659.t1 | AT2G37860 | 28.520 | 277 | 175 | 8 | 124 | 386 | 165 | 432 | 1.26e-26 | 110 |
| MS.gene92659.t1 | AT2G37860 | 28.520 | 277 | 175 | 8 | 124 | 386 | 165 | 432 | 1.26e-26 | 110 |
| MS.gene92659.t1 | AT3G08640 | 29.741 | 232 | 146 | 5 | 162 | 389 | 107 | 325 | 1.51e-22 | 97.8 |
| MS.gene92659.t1 | AT3G08630 | 29.362 | 235 | 143 | 6 | 162 | 389 | 104 | 322 | 2.43e-22 | 97.4 |
| MS.gene92659.t1 | AT5G24690 | 25.833 | 240 | 153 | 6 | 113 | 339 | 180 | 407 | 6.26e-12 | 67.4 |
Find 117 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAAAATTTGGAGGGTTTA+AGG | 0.149174 | 3.1:-24107771 | MS.gene92659:CDS |
| TTAGAACTGCTAATACTTAT+TGG | 0.172495 | 3.1:-24104061 | MS.gene92659:CDS |
| CTTATTGCCAAATTCTTCTA+TGG | 0.222326 | 3.1:-24105840 | MS.gene92659:CDS |
| AATTATTGAGCAACGGATTC+TGG | 0.230169 | 3.1:-24104135 | MS.gene92659:CDS |
| GTTAAGGCGGGGCGGGTTCC+TGG | 0.231023 | 3.1:-24107848 | MS.gene92659:CDS |
| GGGAGTGGAGGTGGTGGTGG+TGG | 0.236269 | 3.1:-24107989 | MS.gene92659:CDS |
| TAGAACTGCTAATACTTATT+GGG | 0.236997 | 3.1:-24104060 | MS.gene92659:CDS |
| AGGACATCCATAGAAGAATT+TGG | 0.239459 | 3.1:+24105833 | None:intergenic |
| TTCAGGTGGTTGTTAAAATT+TGG | 0.252172 | 3.1:-24107782 | MS.gene92659:CDS |
| GGTGGGGATGACGGTGGAGG+TGG | 0.255642 | 3.1:-24107971 | MS.gene92659:CDS |
| GGAGAGATTTCCGGCGGATT+TGG | 0.270043 | 3.1:-24107879 | MS.gene92659:CDS |
| CCTATGGCTTGGCATGAAAA+TGG | 0.277233 | 3.1:+24108066 | None:intergenic |
| TTGGTTAAGCCTTTATCTTC+TGG | 0.287578 | 3.1:+24103904 | None:intergenic |
| GGAAATGGAGGCGGGTTTCC+AGG | 0.300912 | 3.1:-24108010 | MS.gene92659:CDS |
| AGAAGAGGCAATGCTGGTTT+TGG | 0.302888 | 3.1:-24107921 | MS.gene92659:CDS |
| GTTACTTTATCTTAGGTAAC+AGG | 0.304911 | 3.1:-24105942 | MS.gene92659:intron |
| ATGGCTGTAGTGATAGAAAT+TGG | 0.311317 | 3.1:+24108177 | None:intergenic |
| CATCTCTTATGCAGCGTAAC+GGG | 0.313556 | 3.1:-24105502 | MS.gene92659:intron |
| GTTCTTAACTAAGCTTGTTA+TGG | 0.322891 | 3.1:-24107726 | MS.gene92659:CDS |
| TAGGTAACAGGCATTGTAAC+AGG | 0.333404 | 3.1:-24105930 | MS.gene92659:CDS |
| GAGTGGAGGTGGTGGTGGTG+GGG | 0.343485 | 3.1:-24107987 | MS.gene92659:CDS |
| GCGGGCTGTGATGGTGTAGC+TGG | 0.345830 | 3.1:+24108144 | None:intergenic |
| TGGAGGAGTCAGTTGTGTTC+AGG | 0.346622 | 3.1:-24107799 | MS.gene92659:CDS |
| TGACGGTGGAGGTGGGGAAG+AGG | 0.347448 | 3.1:-24107963 | MS.gene92659:CDS |
| GGATTTGGCTGTTGCTGTTA+AGG | 0.361357 | 3.1:-24107864 | MS.gene92659:CDS |
| GTGGGGATGACGGTGGAGGT+GGG | 0.369443 | 3.1:-24107970 | MS.gene92659:CDS |
| GGTGGTGGTGGTGGGGATGA+CGG | 0.370212 | 3.1:-24107980 | MS.gene92659:CDS |
| CAGTTAGTATAAGTTTGTTT+TGG | 0.370260 | 3.1:+24104099 | None:intergenic |
| GGAGTGGAGGTGGTGGTGGT+GGG | 0.372420 | 3.1:-24107988 | MS.gene92659:CDS |
| CCAGGGAGTGGAGGTGGTGG+TGG | 0.377091 | 3.1:-24107992 | MS.gene92659:CDS |
| GCTACACTGGTTGAGATTAC+AGG | 0.377802 | 3.1:+24105102 | None:intergenic |
| CAAAACAAACTTATACTAAC+TGG | 0.384571 | 3.1:-24104098 | MS.gene92659:CDS |
| ATGTCTTTCTCAGCGGGAAA+TGG | 0.390107 | 3.1:-24108025 | MS.gene92659:CDS |
| TGGGGATGACGGTGGAGGTG+GGG | 0.396815 | 3.1:-24107969 | MS.gene92659:CDS |
| AGGGTTTAAGGAGAGGTTGT+TGG | 0.399127 | 3.1:-24107759 | MS.gene92659:CDS |
| ATCTCAACCAGTGTAGCATA+TGG | 0.402251 | 3.1:-24105096 | MS.gene92659:CDS |
| GGGTTTCCAGGGAGTGGAGG+TGG | 0.402523 | 3.1:-24107998 | MS.gene92659:CDS |
| TGTTGCTGTTAAGGCGGGGC+GGG | 0.402815 | 3.1:-24107855 | MS.gene92659:CDS |
| GGTGGTGGTGGGGATGACGG+TGG | 0.403074 | 3.1:-24107977 | MS.gene92659:CDS |
| GGTGGTGGGGATGACGGTGG+AGG | 0.405558 | 3.1:-24107974 | MS.gene92659:CDS |
| GAGGTGGGGAAGAGGAAGAA+AGG | 0.408212 | 3.1:-24107955 | MS.gene92659:CDS |
| GGTTTCTCAACAGGTGGCTT+TGG | 0.409770 | 3.1:-24105631 | MS.gene92659:intron |
| TTGGCTGTTGCTGTTAAGGC+GGG | 0.411375 | 3.1:-24107860 | MS.gene92659:CDS |
| TTTCCAGGGAGTGGAGGTGG+TGG | 0.425609 | 3.1:-24107995 | MS.gene92659:CDS |
| TCTCAACAGGTGGCTTTGGC+AGG | 0.431996 | 3.1:-24105627 | MS.gene92659:intron |
| GGCAGAGGAATGATTGAGAT+TGG | 0.432929 | 3.1:+24108096 | None:intergenic |
| TAGGTCGATGGAGAGATTTC+CGG | 0.435176 | 3.1:-24107888 | MS.gene92659:CDS |
| GGCGGGTTTCCAGGGAGTGG+AGG | 0.439477 | 3.1:-24108001 | MS.gene92659:CDS |
| TTCTCAGCGGGAAATGGAGG+CGG | 0.453413 | 3.1:-24108019 | MS.gene92659:CDS |
| AGTTGGAACCGGTGCTTCAC+TGG | 0.464486 | 3.1:-24105465 | MS.gene92659:intron |
| ATAAGTCCAGCACTAATTGC+AGG | 0.470510 | 3.1:+24105858 | None:intergenic |
| AGAAGAATGTGCAAACTTCA+TGG | 0.477530 | 3.1:+24108122 | None:intergenic |
| AGAAAATTTCACAAAAGAGA+TGG | 0.479864 | 3.1:-24106834 | MS.gene92659:CDS |
| CCACCACCACCTCCACTCCC+TGG | 0.480197 | 3.1:+24107992 | None:intergenic |
| AAGCCATAGGCTTCATACTC+CGG | 0.483088 | 3.1:-24108053 | MS.gene92659:CDS |
| AACTTCATGGCGGGCTGTGA+TGG | 0.484365 | 3.1:+24108135 | None:intergenic |
| TATACACTTCTACAAAGAAT+AGG | 0.490986 | 3.1:-24105597 | MS.gene92659:CDS |
| AGGTGGTTGTTAAAATTTGG+AGG | 0.491981 | 3.1:-24107779 | MS.gene92659:CDS |
| GGGGCAAAGCTGTTCGTAGT+TGG | 0.495711 | 3.1:-24105482 | MS.gene92659:CDS |
| AAATAGAGAAGAGGCAATGC+TGG | 0.496130 | 3.1:-24107927 | MS.gene92659:CDS |
| CCTCCTCCTGCAATTAGTGC+TGG | 0.497096 | 3.1:-24105864 | MS.gene92659:CDS |
| GTTTCCATGTCTTTCTCAGC+GGG | 0.498178 | 3.1:-24108031 | MS.gene92659:CDS |
| ACAAAGAATAGGTGCTATAG+TGG | 0.498264 | 3.1:-24105586 | MS.gene92659:intron |
| CGTGTTTACCAGTGAAGCAC+CGG | 0.499717 | 3.1:+24105457 | None:intergenic |
| CTATGGCTTGGCATGAAAAT+GGG | 0.499733 | 3.1:+24108067 | None:intergenic |
| GGTTGGAGTCCAGAAGATAA+AGG | 0.501111 | 3.1:-24103913 | MS.gene92659:CDS |
| GGAGGCGGGTTTCCAGGGAG+TGG | 0.502191 | 3.1:-24108004 | MS.gene92659:CDS |
| AAGCTGTTCGTAGTTGGAAC+CGG | 0.502348 | 3.1:-24105476 | MS.gene92659:CDS |
| TCTCAATACTCAAATGGCTA+TGG | 0.507583 | 3.1:-24108254 | None:intergenic |
| GCTGAGAAAGACATGGAAAC+CGG | 0.513282 | 3.1:+24108034 | None:intergenic |
| AGGTGGGGAAGAGGAAGAAA+GGG | 0.513416 | 3.1:-24107954 | MS.gene92659:CDS |
| TTAAGAGAAACAGTGGGAGC+AGG | 0.517008 | 3.1:+24105888 | None:intergenic |
| GAAAATGGGTGCAGAGGCAG+AGG | 0.523469 | 3.1:+24108081 | None:intergenic |
| GAAATGGAGGCGGGTTTCCA+GGG | 0.525470 | 3.1:-24108009 | MS.gene92659:CDS |
| TTTGGCTGTTGCTGTTAAGG+CGG | 0.535226 | 3.1:-24107861 | MS.gene92659:CDS |
| ATCAGGTATCAAGTACTAGC+AGG | 0.538106 | 3.1:-24104158 | MS.gene92659:intron |
| TCTCAACCAGTGTAGCATAT+GGG | 0.543058 | 3.1:-24105095 | MS.gene92659:CDS |
| GGCAGAGGCTGGTAGGTCGA+TGG | 0.544016 | 3.1:-24107900 | MS.gene92659:CDS |
| TGGTAGTAGTTAGCAACCTC+AGG | 0.544386 | 3.1:-24105065 | MS.gene92659:intron |
| GAACAAGTGTGCTGAAATGT+TGG | 0.545165 | 3.1:+24108222 | None:intergenic |
| GGGTTCCTGGTTCGATAGTG+AGG | 0.546193 | 3.1:-24107835 | MS.gene92659:CDS |
| GAATGTGCAAACTTCATGGC+GGG | 0.552230 | 3.1:+24108126 | None:intergenic |
| TCTCAGCGGGAAATGGAGGC+GGG | 0.552343 | 3.1:-24108018 | MS.gene92659:CDS |
| AGGCTGCTGCAGAGTTGGAG+CGG | 0.552978 | 3.1:-24106862 | MS.gene92659:CDS |
| GTAAATCCCATATGCTACAC+TGG | 0.555578 | 3.1:+24105089 | None:intergenic |
| AGAACTGCTAATACTTATTG+GGG | 0.556521 | 3.1:-24104059 | MS.gene92659:CDS |
| GGAGTATGAAGCCTATGGCT+TGG | 0.566245 | 3.1:+24108055 | None:intergenic |
| GGTGGTTGTTAAAATTTGGA+GGG | 0.566295 | 3.1:-24107778 | MS.gene92659:CDS |
| CGGGCTGTGATGGTGTAGCT+GGG | 0.567551 | 3.1:+24108145 | None:intergenic |
| AAACCGGAGTATGAAGCCTA+TGG | 0.572368 | 3.1:+24108050 | None:intergenic |
| CCAGCACTAATTGCAGGAGG+AGG | 0.574932 | 3.1:+24105864 | None:intergenic |
| CCATCTCTTATGCAGCGTAA+CGG | 0.578736 | 3.1:-24105503 | MS.gene92659:intron |
| AAGGGATAGAAATAGAGAAG+AGG | 0.582114 | 3.1:-24107936 | MS.gene92659:CDS |
| CTGTTGCTGTTAAGGCGGGG+CGG | 0.583576 | 3.1:-24107856 | MS.gene92659:CDS |
| TATATCTTTGAGTAGGTGGG+TGG | 0.584566 | 3.1:-24103949 | MS.gene92659:intron |
| AATTTGGAGGGTTTAAGGAG+AGG | 0.588745 | 3.1:-24107766 | MS.gene92659:CDS |
| AGGAGGTTTAAGAGAAACAG+TGG | 0.589294 | 3.1:+24105881 | None:intergenic |
| AACCTCCTCACTATCGAACC+AGG | 0.592357 | 3.1:+24107830 | None:intergenic |
| TAGCAGGAATTATTGAGCAA+CGG | 0.592464 | 3.1:-24104142 | MS.gene92659:CDS |
| TCTTTCTCAGCGGGAAATGG+AGG | 0.595170 | 3.1:-24108022 | MS.gene92659:CDS |
| ATCTCTTATGCAGCGTAACG+GGG | 0.596886 | 3.1:-24105501 | MS.gene92659:intron |
| AGGAGTCAGTTGTGTTCAGG+TGG | 0.602175 | 3.1:-24107796 | MS.gene92659:CDS |
| TTCCTGGTTCGATAGTGAGG+AGG | 0.603087 | 3.1:-24107832 | MS.gene92659:CDS |
| TGCATTGATCAATGCACAGA+AGG | 0.610535 | 3.1:-24105157 | MS.gene92659:CDS |
| TGGCATGAAAATGGGTGCAG+AGG | 0.615192 | 3.1:+24108075 | None:intergenic |
| ACAGCAACAGCCAAATCCGC+CGG | 0.617065 | 3.1:+24107869 | None:intergenic |
| TGTAGCTGGGTAAAGAAGAA+TGG | 0.622312 | 3.1:+24108158 | None:intergenic |
| GGTTTCCATGTCTTTCTCAG+CGG | 0.622323 | 3.1:-24108032 | MS.gene92659:CDS |
| TGTTGTTGTTATCTTCACCA+AGG | 0.630917 | 3.1:-24107699 | MS.gene92659:intron |
| TGTAGCATATGGGATTTACA+TGG | 0.636490 | 3.1:-24105085 | MS.gene92659:CDS |
| ATTTCCCGCTGAGAAAGACA+TGG | 0.636719 | 3.1:+24108027 | None:intergenic |
| TGGCTGTTGCTGTTAAGGCG+GGG | 0.645154 | 3.1:-24107859 | MS.gene92659:CDS |
| GTGTGCTGAAATGTTGGAGA+AGG | 0.655807 | 3.1:+24108228 | None:intergenic |
| GGAGGTTTAAGAGAAACAGT+GGG | 0.664978 | 3.1:+24105882 | None:intergenic |
| GTCGATGGAGAGATTTCCGG+CGG | 0.669889 | 3.1:-24107885 | MS.gene92659:CDS |
| AGTCCAGCACTAATTGCAGG+AGG | 0.693475 | 3.1:+24105861 | None:intergenic |
| AGAATGTGCAAACTTCATGG+CGG | 0.737817 | 3.1:+24108125 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACAACATTTATTATTATT+AGG | + | chr3.1:24107785-24107804 | None:intergenic | 10.0% |
| !!! | AATTAATATAAGGATAATTT+TGG | - | chr3.1:24107827-24107846 | MS.gene92659:CDS | 10.0% |
| !!! | TGAGATTTTAAATTAATATA+AGG | - | chr3.1:24107817-24107836 | MS.gene92659:CDS | 10.0% |
| !! | AATACACTAAATTGTAATAA+TGG | + | chr3.1:24104483-24104502 | None:intergenic | 15.0% |
| !! | AATTATTTCCTTATAAATGA+AGG | - | chr3.1:24106617-24106636 | MS.gene92659:intron | 15.0% |
| !! | AATTTAATAATTAGCATGAA+TGG | - | chr3.1:24105680-24105699 | MS.gene92659:intron | 15.0% |
| !! | AGAAAGAAATGTTAATAATA+CGG | - | chr3.1:24107689-24107708 | MS.gene92659:intron | 15.0% |
| !! | ATTTAATAATTAGCATGAAT+GGG | - | chr3.1:24105681-24105700 | MS.gene92659:intron | 15.0% |
| !! | TAATAATAAATGTTGTTACA+AGG | - | chr3.1:24107787-24107806 | MS.gene92659:CDS | 15.0% |
| !! | TAATATTCTTAAGCAAATAA+TGG | + | chr3.1:24105176-24105195 | None:intergenic | 15.0% |
| !!! | AAACAACTTTTACTATTATT+AGG | + | chr3.1:24107749-24107768 | None:intergenic | 15.0% |
| !!! | AGAAGAATATAATAACTTTT+AGG | + | chr3.1:24108161-24108180 | None:intergenic | 15.0% |
| !!! | ATTTTAATTAAAAGTGTGTT+TGG | - | chr3.1:24107483-24107502 | MS.gene92659:intron | 15.0% |
| !!! | ATTTTATACTGAAAATGAAA+AGG | + | chr3.1:24106386-24106405 | None:intergenic | 15.0% |
| !!! | CCTTATTTAATTAAGTTTAA+GGG | + | chr3.1:24107554-24107573 | None:intergenic | 15.0% |
| !!! | TCCTTATTTAATTAAGTTTA+AGG | + | chr3.1:24107555-24107574 | None:intergenic | 15.0% |
| !!! | TTTAAACTGATGATAATTTT+TGG | + | chr3.1:24104924-24104943 | None:intergenic | 15.0% |
| !! | AAGAATATTAAGATTGTTTC+TGG | - | chr3.1:24105186-24105205 | MS.gene92659:intron | 20.0% |
| !! | AAGGAAATAATTATTTGACT+TGG | + | chr3.1:24106609-24106628 | None:intergenic | 20.0% |
| !! | CCCTTAAACTTAATTAAATA+AGG | - | chr3.1:24107551-24107570 | MS.gene92659:intron | 20.0% |
| !! | CTATAATTGTAGATTATAGA+TGG | - | chr3.1:24106819-24106838 | MS.gene92659:CDS | 20.0% |
| !! | GTACAATAGTATTTAAACAT+AGG | + | chr3.1:24104543-24104562 | None:intergenic | 20.0% |
| !! | TAAAATAAAAGTGAGAATGT+GGG | - | chr3.1:24105027-24105046 | MS.gene92659:intron | 20.0% |
| !! | TTTAACACAATAAGTATCAT+TGG | + | chr3.1:24105580-24105599 | None:intergenic | 20.0% |
| !! | TTTATATCCTCAAATTATTG+TGG | - | chr3.1:24107296-24107315 | MS.gene92659:intron | 20.0% |
| !!! | AATAGAATGATGGAAATTAA+TGG | + | chr3.1:24106776-24106795 | None:intergenic | 20.0% |
| !!! | ATCAGTTATTGTTGAATTTT+CGG | - | chr3.1:24106497-24106516 | MS.gene92659:intron | 20.0% |
| !!! | GAAATAATGGATTAGTAATA+GGG | - | chr3.1:24107630-24107649 | MS.gene92659:intron | 20.0% |
| !!! | TAAGCTAATTAAGATTTTGA+AGG | - | chr3.1:24104607-24104626 | MS.gene92659:intron | 20.0% |
| !!! | TAATTTTTGGTAATTTGTGA+AGG | + | chr3.1:24104911-24104930 | None:intergenic | 20.0% |
| !!! | TGAAATAATGGATTAGTAAT+AGG | - | chr3.1:24107629-24107648 | MS.gene92659:intron | 20.0% |
| !!! | TTAGTTTGTTACTTTATCTT+AGG | - | chr3.1:24106200-24106219 | MS.gene92659:intron | 20.0% |
| !!! | TTTATTTATCAACTGCATTT+TGG | + | chr3.1:24105813-24105832 | None:intergenic | 20.0% |
| ! | AAACAAGTAGAGATAAAAGT+TGG | - | chr3.1:24104662-24104681 | MS.gene92659:intron | 25.0% |
| ! | AAATTTGCAGGACTTATAAT+TGG | - | chr3.1:24104942-24104961 | MS.gene92659:intron | 25.0% |
| ! | AGAAAATTAGCCATATGTAA+TGG | - | chr3.1:24105247-24105266 | MS.gene92659:intron | 25.0% |
| ! | AGAAAATTTCACAAAAGAGA+TGG | - | chr3.1:24105315-24105334 | MS.gene92659:intron | 25.0% |
| ! | AGTATTTAAACATAGGAACT+GGG | + | chr3.1:24104536-24104555 | None:intergenic | 25.0% |
| ! | ATGCTGGAAAAGATTAATAA+TGG | - | chr3.1:24105975-24105994 | MS.gene92659:intron | 25.0% |
| ! | ATTAAGTTTAAGGGTAAAAC+AGG | + | chr3.1:24107545-24107564 | None:intergenic | 25.0% |
| ! | CAAAACAAACTTATACTAAC+TGG | - | chr3.1:24108051-24108070 | MS.gene92659:CDS | 25.0% |
| ! | CCTATTGAGTAATAACAATT+TGG | + | chr3.1:24105436-24105455 | None:intergenic | 25.0% |
| ! | GTAAAATAAAAGTGAGAATG+TGG | - | chr3.1:24105026-24105045 | MS.gene92659:intron | 25.0% |
| ! | TAATAATGGTTGTACAATGT+AGG | - | chr3.1:24105989-24106008 | MS.gene92659:intron | 25.0% |
| ! | TACAATTATAGATGTTGATG+AGG | + | chr3.1:24106810-24106829 | None:intergenic | 25.0% |
| ! | TAGAACTGCTAATACTTATT+GGG | - | chr3.1:24108089-24108108 | MS.gene92659:CDS | 25.0% |
| ! | TAGTATTTAAACATAGGAAC+TGG | + | chr3.1:24104537-24104556 | None:intergenic | 25.0% |
| ! | TATACACTTCTACAAAGAAT+AGG | - | chr3.1:24106552-24106571 | MS.gene92659:intron | 25.0% |
| ! | TTAGAACTGCTAATACTTAT+TGG | - | chr3.1:24108088-24108107 | MS.gene92659:CDS | 25.0% |
| ! | TTATTGTGTTAAATCAAAGC+AGG | - | chr3.1:24105587-24105606 | MS.gene92659:CDS | 25.0% |
| ! | TTCACATGAAAATAGAATGA+TGG | + | chr3.1:24106786-24106805 | None:intergenic | 25.0% |
| ! | TTCTTGTGCATATACTTATT+CGG | - | chr3.1:24107172-24107191 | MS.gene92659:intron | 25.0% |
| ! | TTTGAAGGTTTCTTGTTAAA+TGG | - | chr3.1:24104622-24104641 | MS.gene92659:intron | 25.0% |
| ! | TTTGGTATATATCTTTGAGT+AGG | - | chr3.1:24108193-24108212 | MS.gene92659:CDS | 25.0% |
| !! | AAAAGTTGGTTTAGAATATG+AGG | - | chr3.1:24104676-24104695 | MS.gene92659:intron | 25.0% |
| !! | ATCATCAGTTTAAAATTTGC+AGG | - | chr3.1:24104930-24104949 | MS.gene92659:intron | 25.0% |
| !! | CCAAATTGTTATTACTCAAT+AGG | - | chr3.1:24105433-24105452 | MS.gene92659:intron | 25.0% |
| !! | CTAATTTTCTTGTCATAGTA+TGG | + | chr3.1:24105237-24105256 | None:intergenic | 25.0% |
| !! | GTAATAATGGAAATAAACCT+TGG | + | chr3.1:24104470-24104489 | None:intergenic | 25.0% |
| !! | TATATTCTTCTTAGTTCTCA+TGG | - | chr3.1:24108170-24108189 | MS.gene92659:CDS | 25.0% |
| !! | TTAATCTTTTCCAGCATTTA+AGG | + | chr3.1:24105972-24105991 | None:intergenic | 25.0% |
| !! | TTCGTTTCTTTTCTTGTAAA+CGG | + | chr3.1:24105065-24105084 | None:intergenic | 25.0% |
| !!! | CAGTTAGTATAAGTTTGTTT+TGG | + | chr3.1:24108053-24108072 | None:intergenic | 25.0% |
| !!! | GAGATAATAGTTTTAACAAG+AGG | - | chr3.1:24105499-24105518 | MS.gene92659:intron | 25.0% |
| !!! | TAGTTTTAACAAGAGGATAT+AGG | - | chr3.1:24105506-24105525 | MS.gene92659:intron | 25.0% |
| !!! | TCTTGCAATATTTTTTTGTC+AGG | - | chr3.1:24106950-24106969 | MS.gene92659:intron | 25.0% |
| !!! | TTTATCTCTACTTGTTTTTG+AGG | + | chr3.1:24104659-24104678 | None:intergenic | 25.0% |
| AAAACTCATCATGCCAAATA+AGG | + | chr3.1:24105096-24105115 | None:intergenic | 30.0% | |
| AAATGCTGACATTCAAAACA+TGG | - | chr3.1:24105939-24105958 | MS.gene92659:intron | 30.0% | |
| AAATTACTGAGAAGTTGAAC+TGG | + | chr3.1:24105712-24105731 | None:intergenic | 30.0% | |
| AGAACTGCTAATACTTATTG+GGG | - | chr3.1:24108090-24108109 | MS.gene92659:CDS | 30.0% | |
| AGATTCCAACTTTGTAACTT+TGG | + | chr3.1:24105127-24105146 | None:intergenic | 30.0% | |
| AGTTCAACTTCTCAGTAATT+TGG | - | chr3.1:24105711-24105730 | MS.gene92659:intron | 30.0% | |
| ATGTCAGCTCTATCTATTAA+TGG | - | chr3.1:24106019-24106038 | MS.gene92659:intron | 30.0% | |
| CTGATCATATATGTTTCGAT+CGG | + | chr3.1:24106482-24106501 | None:intergenic | 30.0% | |
| CTTATTGCCAAATTCTTCTA+TGG | - | chr3.1:24106309-24106328 | MS.gene92659:intron | 30.0% | |
| GATGAGATATCCATTACATA+TGG | + | chr3.1:24105260-24105279 | None:intergenic | 30.0% | |
| GTATATATCTTTGAGTAGGT+GGG | - | chr3.1:24108197-24108216 | MS.gene92659:CDS | 30.0% | |
| GTTAAAATTTGGAGGGTTTA+AGG | - | chr3.1:24104378-24104397 | MS.gene92659:intron | 30.0% | |
| GTTTACTACATGAACATTTG+TGG | - | chr3.1:24105546-24105565 | MS.gene92659:intron | 30.0% | |
| TAAATCAAAGCAGGAAACAA+GGG | - | chr3.1:24105596-24105615 | MS.gene92659:CDS | 30.0% | |
| TACGACATTAAGCAGATTAT+AGG | + | chr3.1:24106084-24106103 | None:intergenic | 30.0% | |
| TGTTGAACTATCAAGGTAAA+TGG | + | chr3.1:24105761-24105780 | None:intergenic | 30.0% | |
| TTAAATCAAAGCAGGAAACA+AGG | - | chr3.1:24105595-24105614 | MS.gene92659:CDS | 30.0% | |
| TTCACCAAAAGAATATGCTA+GGG | + | chr3.1:24106853-24106872 | None:intergenic | 30.0% | |
| TTCAGGTGGTTGTTAAAATT+TGG | - | chr3.1:24104367-24104386 | MS.gene92659:intron | 30.0% | |
| TTGATTAATTGCTAACTGTC+TGG | + | chr3.1:24107145-24107164 | None:intergenic | 30.0% | |
| TTTCACCAAAGTTACAAAGT+TGG | - | chr3.1:24105119-24105138 | MS.gene92659:CDS | 30.0% | |
| ! | ATACTTATTCGGACTTTTGA+GGG | - | chr3.1:24107183-24107202 | MS.gene92659:intron | 30.0% |
| ! | GTTACTTTATCTTAGGTAAC+AGG | - | chr3.1:24106207-24106226 | MS.gene92659:intron | 30.0% |
| ! | TAATTTGTGAAGGCAACAAA+AGG | + | chr3.1:24104901-24104920 | None:intergenic | 30.0% |
| ! | TATACTTATTCGGACTTTTG+AGG | - | chr3.1:24107182-24107201 | MS.gene92659:intron | 30.0% |
| ! | TATTTGGCATGATGAGTTTT+AGG | - | chr3.1:24105096-24105115 | MS.gene92659:CDS | 30.0% |
| ! | TCGTTTCTTTTCTTGTAAAC+GGG | + | chr3.1:24105064-24105083 | None:intergenic | 30.0% |
| ! | TTTATCAACTGCATTTTGGA+AGG | + | chr3.1:24105809-24105828 | None:intergenic | 30.0% |
| !! | AGTAGTTTGTTGAAGGAAAT+TGG | + | chr3.1:24107114-24107133 | None:intergenic | 30.0% |
| !! | ATTCTGTAGTAGTTTGTTGA+AGG | + | chr3.1:24107121-24107140 | None:intergenic | 30.0% |
| !! | GTTCTTAACTAAGCTTGTTA+TGG | - | chr3.1:24104423-24104442 | MS.gene92659:intron | 30.0% |
| !! | GTTTTGAATGTCAGCATTTA+AGG | + | chr3.1:24105938-24105957 | None:intergenic | 30.0% |
| !! | TAACAGGTTTTGTACTAGTT+TGG | - | chr3.1:24106235-24106254 | MS.gene92659:intron | 30.0% |
| !!! | GCAATATTTTTTTGTCAGGT+TGG | - | chr3.1:24106954-24106973 | MS.gene92659:intron | 30.0% |
| !!! | TCGTATTTTAGCTTTTGTTC+TGG | - | chr3.1:24106099-24106118 | MS.gene92659:intron | 30.0% |
| !!! | TTAACCTGAAAAGCATTTTC+AGG | + | chr3.1:24106339-24106358 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTCAGGTTGGTAT+AGG | - | chr3.1:24106960-24106979 | MS.gene92659:intron | 30.0% |
| AACAAATGCAAGCTCTATTC+TGG | + | chr3.1:24104711-24104730 | None:intergenic | 35.0% | |
| AAGAGGGAAAATGATGTAGA+TGG | + | chr3.1:24105786-24105805 | None:intergenic | 35.0% | |
| AAGGGATAGAAATAGAGAAG+AGG | - | chr3.1:24104213-24104232 | MS.gene92659:intron | 35.0% | |
| ACCTACTGTGCATGTAATTT+AGG | - | chr3.1:24105646-24105665 | MS.gene92659:intron | 35.0% | |
| AGAAAGATGTTGTTAGCAGA+GGG | + | chr3.1:24105001-24105020 | None:intergenic | 35.0% | |
| AGAAGAATGTGCAAACTTCA+TGG | + | chr3.1:24104030-24104049 | None:intergenic | 35.0% | |
| AGGACATCCATAGAAGAATT+TGG | + | chr3.1:24106319-24106338 | None:intergenic | 35.0% | |
| AGGTGGTTGTTAAAATTTGG+AGG | - | chr3.1:24104370-24104389 | MS.gene92659:intron | 35.0% | |
| ATCACACAGTCAAATCCTTA+AGG | + | chr3.1:24107973-24107992 | None:intergenic | 35.0% | |
| ATGGCTGTAGTGATAGAAAT+TGG | + | chr3.1:24103975-24103994 | None:intergenic | 35.0% | |
| CGATGTAGACGATGAAATAA+TGG | - | chr3.1:24107617-24107636 | MS.gene92659:intron | 35.0% | |
| CTCCTAATTCTCGAATCAAA+CGG | + | chr3.1:24107417-24107436 | None:intergenic | 35.0% | |
| GAACTCATGTTCGAAATTCA+TGG | + | chr3.1:24106932-24106951 | None:intergenic | 35.0% | |
| GATCTATGAACATGTTACTG+TGG | - | chr3.1:24104507-24104526 | MS.gene92659:intron | 35.0% | |
| GGAGATGACCTTCATTTATA+AGG | + | chr3.1:24106628-24106647 | None:intergenic | 35.0% | |
| GGTATATATCTTTGAGTAGG+TGG | - | chr3.1:24108196-24108215 | MS.gene92659:CDS | 35.0% | |
| GGTGGTTGTTAAAATTTGGA+GGG | - | chr3.1:24104371-24104390 | MS.gene92659:intron | 35.0% | |
| GTTCACCAAAAGAATATGCT+AGG | + | chr3.1:24106854-24106873 | None:intergenic | 35.0% | |
| TAAATTACATGCACAGTAGG+TGG | + | chr3.1:24105647-24105666 | None:intergenic | 35.0% | |
| TACAGTCTTTGTAGTGTGAA+AGG | - | chr3.1:24104560-24104579 | MS.gene92659:intron | 35.0% | |
| TAGCAGGAATTATTGAGCAA+CGG | - | chr3.1:24108007-24108026 | MS.gene92659:CDS | 35.0% | |
| TCACACAGTCAAATCCTTAA+GGG | + | chr3.1:24107972-24107991 | None:intergenic | 35.0% | |
| TCGACATCCACAATAATTTG+AGG | + | chr3.1:24107306-24107325 | None:intergenic | 35.0% | |
| TGAAGGCAACAAAAGGAATT+TGG | + | chr3.1:24104894-24104913 | None:intergenic | 35.0% | |
| TGTAGCATATGGGATTTACA+TGG | - | chr3.1:24107064-24107083 | MS.gene92659:intron | 35.0% | |
| TTAATGGAGTTCCATATGCA+AGG | + | chr3.1:24106760-24106779 | None:intergenic | 35.0% | |
| TTATGCAGCATTACTCTCTT+GGG | - | chr3.1:24104732-24104751 | MS.gene92659:intron | 35.0% | |
| TTTCTTGCTTATGTCTTTCC+AGG | - | chr3.1:24105402-24105421 | MS.gene92659:intron | 35.0% | |
| ! | AAAAGTGTGTTTGGTTCACA+AGG | - | chr3.1:24107492-24107511 | MS.gene92659:intron | 35.0% |
| ! | AAAGTGTGTTTGGTTCACAA+GGG | - | chr3.1:24107493-24107512 | MS.gene92659:intron | 35.0% |
| ! | AATTATTGAGCAACGGATTC+TGG | - | chr3.1:24108014-24108033 | MS.gene92659:CDS | 35.0% |
| ! | ACAAAGAATAGGTGCTATAG+TGG | - | chr3.1:24106563-24106582 | MS.gene92659:intron | 35.0% |
| ! | ACTTCCCTAGCATATTCTTT+TGG | - | chr3.1:24106846-24106865 | MS.gene92659:CDS | 35.0% |
| ! | ATGTCCTGAAAATGCTTTTC+AGG | - | chr3.1:24106332-24106351 | MS.gene92659:intron | 35.0% |
| ! | CGTTTCTTTTCTTGTAAACG+GGG | + | chr3.1:24105063-24105082 | None:intergenic | 35.0% |
| ! | GTTTGATTCGAGAATTAGGA+GGG | - | chr3.1:24107416-24107435 | MS.gene92659:intron | 35.0% |
| ! | TACTTATTCGGACTTTTGAG+GGG | - | chr3.1:24107184-24107203 | MS.gene92659:intron | 35.0% |
| ! | TCTTCTTAGTTCTCATGGTT+TGG | - | chr3.1:24108175-24108194 | MS.gene92659:CDS | 35.0% |
| ! | TGAATTTTCGGTTTCTCAAC+AGG | - | chr3.1:24106509-24106528 | MS.gene92659:intron | 35.0% |
| ! | TGGATATCTCATCTGTTTTC+AGG | - | chr3.1:24105267-24105286 | MS.gene92659:intron | 35.0% |
| ! | TGTTGTTGTTATCTTCACCA+AGG | - | chr3.1:24104450-24104469 | MS.gene92659:intron | 35.0% |
| ! | TTTGATTCGAGAATTAGGAG+GGG | - | chr3.1:24107417-24107436 | MS.gene92659:intron | 35.0% |
| !! | GTTCAATTTTTAGAAGGGGA+GGG | + | chr3.1:24107888-24107907 | None:intergenic | 35.0% |
| !! | TTCAATTTTTAGAAGGGGAG+GGG | + | chr3.1:24107887-24107906 | None:intergenic | 35.0% |
| !!! | GGATTTTGTTGTTGCTAATG+TGG | - | chr3.1:24105336-24105355 | MS.gene92659:intron | 35.0% |
| AAATAGAGAAGAGGCAATGC+TGG | - | chr3.1:24104222-24104241 | MS.gene92659:intron | 40.0% | |
| AAGGATTTGACTGTGTGATC+AGG | - | chr3.1:24107974-24107993 | MS.gene92659:CDS | 40.0% | |
| AAGTTGGAATCTCTCTCTAC+AGG | - | chr3.1:24105135-24105154 | MS.gene92659:CDS | 40.0% | |
| AATTTGGAGGGTTTAAGGAG+AGG | - | chr3.1:24104383-24104402 | MS.gene92659:intron | 40.0% | |
| ACGAACGAGTCTACCTTATT+TGG | - | chr3.1:24105080-24105099 | MS.gene92659:CDS | 40.0% | |
| ACTAACTCTGACACAGAAAC+TGG | + | chr3.1:24104794-24104813 | None:intergenic | 40.0% | |
| AGAATGTGCAAACTTCATGG+CGG | + | chr3.1:24104027-24104046 | None:intergenic | 40.0% | |
| AGCATTACTCTCTTGGGATT+AGG | - | chr3.1:24104738-24104757 | MS.gene92659:intron | 40.0% | |
| AGGAGGTTTAAGAGAAACAG+TGG | + | chr3.1:24106271-24106290 | None:intergenic | 40.0% | |
| ATAAGTCCAGCACTAATTGC+AGG | + | chr3.1:24106294-24106313 | None:intergenic | 40.0% | |
| ATCAGGTATCAAGTACTAGC+AGG | - | chr3.1:24107991-24108010 | MS.gene92659:CDS | 40.0% | |
| ATCTCAACCAGTGTAGCATA+TGG | - | chr3.1:24107053-24107072 | MS.gene92659:intron | 40.0% | |
| CAGAAAGATGTTGTTAGCAG+AGG | + | chr3.1:24105002-24105021 | None:intergenic | 40.0% | |
| CTTATGTCTTTCCAGGTTCA+GGG | - | chr3.1:24105409-24105428 | MS.gene92659:intron | 40.0% | |
| GAACAAGTGTGCTGAAATGT+TGG | + | chr3.1:24103930-24103949 | None:intergenic | 40.0% | |
| GAAGGAAATTGGATTACCTG+AGG | + | chr3.1:24107103-24107122 | None:intergenic | 40.0% | |
| GATGGCATGTTGAACTATCA+AGG | + | chr3.1:24105768-24105787 | None:intergenic | 40.0% | |
| GCCTAAATTACATGCACAGT+AGG | + | chr3.1:24105650-24105669 | None:intergenic | 40.0% | |
| GGAGGTTTAAGAGAAACAGT+GGG | + | chr3.1:24106270-24106289 | None:intergenic | 40.0% | |
| GTAAATCCCATATGCTACAC+TGG | + | chr3.1:24107063-24107082 | None:intergenic | 40.0% | |
| GTTATGCAGCATTACTCTCT+TGG | - | chr3.1:24104731-24104750 | MS.gene92659:intron | 40.0% | |
| TATATCTTTGAGTAGGTGGG+TGG | - | chr3.1:24108200-24108219 | MS.gene92659:CDS | 40.0% | |
| TCCAAAACTCTCGAACCAAA+CGG | - | chr3.1:24107945-24107964 | MS.gene92659:CDS | 40.0% | |
| TCTCAACCAGTGTAGCATAT+GGG | - | chr3.1:24107054-24107073 | MS.gene92659:intron | 40.0% | |
| TGGCAAGATTCCTTAAATGC+TGG | - | chr3.1:24105959-24105978 | MS.gene92659:intron | 40.0% | |
| TGTAGCTGGGTAAAGAAGAA+TGG | + | chr3.1:24103994-24104013 | None:intergenic | 40.0% | |
| TTGGAACCTTTGATGAAGCT+TGG | + | chr3.1:24104875-24104894 | None:intergenic | 40.0% | |
| ! | AAGTGTGTTTGGTTCACAAG+GGG | - | chr3.1:24107494-24107513 | MS.gene92659:intron | 40.0% |
| ! | AGAATAGGTGCTATAGTGGT+AGG | - | chr3.1:24106567-24106586 | MS.gene92659:intron | 40.0% |
| ! | ATTTTCGGTTTCTCAACAGG+TGG | - | chr3.1:24106512-24106531 | MS.gene92659:intron | 40.0% |
| ! | CGTTTGATTCGAGAATTAGG+AGG | - | chr3.1:24107415-24107434 | MS.gene92659:intron | 40.0% |
| ! | CTATGGCTTGGCATGAAAAT+GGG | + | chr3.1:24104085-24104104 | None:intergenic | 40.0% |
| ! | GATTTAGCGAAACTTGCTCT+TGG | - | chr3.1:24106733-24106752 | MS.gene92659:intron | 40.0% |
| ! | GTCCGTTTGATTCGAGAATT+AGG | - | chr3.1:24107412-24107431 | MS.gene92659:intron | 40.0% |
| ! | TAGGTAACAGGCATTGTAAC+AGG | - | chr3.1:24106219-24106238 | MS.gene92659:intron | 40.0% |
| ! | TGCATTGATCAATGCACAGA+AGG | - | chr3.1:24106992-24107011 | MS.gene92659:intron | 40.0% |
| !! | AACTGCATTTTGGAAGGAAG+AGG | + | chr3.1:24105803-24105822 | None:intergenic | 40.0% |
| !! | ACTGCATTTTGGAAGGAAGA+GGG | + | chr3.1:24105802-24105821 | None:intergenic | 40.0% |
| !! | CAAGGGCATATGCAATTTTC+AGG | - | chr3.1:24105613-24105632 | MS.gene92659:CDS | 40.0% |
| !!! | AGTGAGGAGGTTTTTTGAGT+TGG | - | chr3.1:24104330-24104349 | MS.gene92659:intron | 40.0% |
| !!! | TTTGGTTCGAGAGTTTTGGA+GGG | + | chr3.1:24107945-24107964 | None:intergenic | 40.0% |
| AAACCGGAGTATGAAGCCTA+TGG | + | chr3.1:24104102-24104121 | None:intergenic | 45.0% | |
| AACAATTTGGACCCTGAACC+TGG | + | chr3.1:24105423-24105442 | None:intergenic | 45.0% | |
| AAGCCATAGGCTTCATACTC+CGG | - | chr3.1:24104096-24104115 | MS.gene92659:CDS | 45.0% | |
| AAGCTGTTCGTAGTTGGAAC+CGG | - | chr3.1:24106673-24106692 | MS.gene92659:intron | 45.0% | |
| AGGGTTTAAGGAGAGGTTGT+TGG | - | chr3.1:24104390-24104409 | MS.gene92659:intron | 45.0% | |
| ATCTCTTATGCAGCGTAACG+GGG | - | chr3.1:24106648-24106667 | MS.gene92659:intron | 45.0% | |
| ATGTCTTTCTCAGCGGGAAA+TGG | - | chr3.1:24104124-24104143 | MS.gene92659:CDS | 45.0% | |
| ATTACATGCACAGTAGGTGG+AGG | + | chr3.1:24105644-24105663 | None:intergenic | 45.0% | |
| ATTCGAGAATTAGGAGGGGA+GGG | - | chr3.1:24107421-24107440 | MS.gene92659:intron | 45.0% | |
| ATTTCCCGCTGAGAAAGACA+TGG | + | chr3.1:24104125-24104144 | None:intergenic | 45.0% | |
| CAAATCCTTAAGGGTCCGTT+TGG | + | chr3.1:24107963-24107982 | None:intergenic | 45.0% | |
| CATCTCTTATGCAGCGTAAC+GGG | - | chr3.1:24106647-24106666 | MS.gene92659:intron | 45.0% | |
| CCATCTCTTATGCAGCGTAA+CGG | - | chr3.1:24106646-24106665 | MS.gene92659:intron | 45.0% | |
| CGACGTATCAGTGTCATGTT+TGG | - | chr3.1:24107323-24107342 | MS.gene92659:intron | 45.0% | |
| CTAGCAACTGCTAACAGACT+TGG | - | chr3.1:24105910-24105929 | MS.gene92659:CDS | 45.0% | |
| GAATGTGCAAACTTCATGGC+GGG | + | chr3.1:24104026-24104045 | None:intergenic | 45.0% | |
| GAGCTCTATAACCAAGCTAG+TGG | + | chr3.1:24104850-24104869 | None:intergenic | 45.0% | |
| GCTCAACCAAGCTTCATCAA+AGG | - | chr3.1:24104866-24104885 | MS.gene92659:intron | 45.0% | |
| GCTGAGAAAGACATGGAAAC+CGG | + | chr3.1:24104118-24104137 | None:intergenic | 45.0% | |
| GCTTATGTCTTTCCAGGTTC+AGG | - | chr3.1:24105408-24105427 | MS.gene92659:intron | 45.0% | |
| GGCAGAGGAATGATTGAGAT+TGG | + | chr3.1:24104056-24104075 | None:intergenic | 45.0% | |
| GGTTGGAGTCCAGAAGATAA+AGG | - | chr3.1:24108236-24108255 | MS.gene92659:CDS | 45.0% | |
| GGTTTCCATGTCTTTCTCAG+CGG | - | chr3.1:24104117-24104136 | MS.gene92659:CDS | 45.0% | |
| GTGTGCTGAAATGTTGGAGA+AGG | + | chr3.1:24103924-24103943 | None:intergenic | 45.0% | |
| GTTTCCATGTCTTTCTCAGC+GGG | - | chr3.1:24104118-24104137 | MS.gene92659:CDS | 45.0% | |
| TAGGTCGATGGAGAGATTTC+CGG | - | chr3.1:24104261-24104280 | MS.gene92659:intron | 45.0% | |
| TGGTAGTAGTTAGCAACCTC+AGG | - | chr3.1:24107084-24107103 | MS.gene92659:intron | 45.0% | |
| TTAAGAGAAACAGTGGGAGC+AGG | + | chr3.1:24106264-24106283 | None:intergenic | 45.0% | |
| TTGCTCTTGGTCCTTGCATA+TGG | - | chr3.1:24106746-24106765 | MS.gene92659:intron | 45.0% | |
| TTTCTTGTAAACGGGGTGAG+AGG | + | chr3.1:24105056-24105075 | None:intergenic | 45.0% | |
| ! | CCATTTTCATGCCAAGCCAT+AGG | - | chr3.1:24104083-24104102 | MS.gene92659:CDS | 45.0% |
| ! | CCTATGGCTTGGCATGAAAA+TGG | + | chr3.1:24104086-24104105 | None:intergenic | 45.0% |
| ! | GCTACACTGGTTGAGATTAC+AGG | + | chr3.1:24107050-24107069 | None:intergenic | 45.0% |
| ! | GGATTTGGCTGTTGCTGTTA+AGG | - | chr3.1:24104285-24104304 | MS.gene92659:intron | 45.0% |
| ! | GTGGATTTTGCTAGATGGGT+TGG | - | chr3.1:24108219-24108238 | MS.gene92659:CDS | 45.0% |
| ! | TTTGGCTGTTGCTGTTAAGG+CGG | - | chr3.1:24104288-24104307 | MS.gene92659:intron | 45.0% |
| !! | AATTTTTAGAAGGGGAGGGG+AGG | + | chr3.1:24107884-24107903 | None:intergenic | 45.0% |
| !! | AGGAATTTTAACGGAGGGGA+GGG | - | chr3.1:24107450-24107469 | MS.gene92659:intron | 45.0% |
| !! | AGGGGAGGAATTTTAACGGA+GGG | - | chr3.1:24107445-24107464 | MS.gene92659:intron | 45.0% |
| !! | ATTTTTAGAAGGGGAGGGGA+GGG | + | chr3.1:24107883-24107902 | None:intergenic | 45.0% |
| !! | GTGGGTGGATTTTGCTAGAT+GGG | - | chr3.1:24108215-24108234 | MS.gene92659:CDS | 45.0% |
| !! | GTTTGGTTCGAGAGTTTTGG+AGG | + | chr3.1:24107946-24107965 | None:intergenic | 45.0% |
| !! | TCCGTTTGGTTCGAGAGTTT+TGG | + | chr3.1:24107949-24107968 | None:intergenic | 45.0% |
| !!! | AGAAGAGGCAATGCTGGTTT+TGG | - | chr3.1:24104228-24104247 | MS.gene92659:intron | 45.0% |
| !!! | AGTTTGTTTTGGCGTAGCAG+TGG | + | chr3.1:24108042-24108061 | None:intergenic | 45.0% |
| !!! | GAGGAGGTTTTTTGAGTTGG+AGG | - | chr3.1:24104333-24104352 | MS.gene92659:intron | 45.0% |
| !!! | TTGGTTCGAGAGTTTTGGAG+GGG | + | chr3.1:24107944-24107963 | None:intergenic | 45.0% |
| !!! | TTTATTTTTTTTTTCATTTA+GGG | - | chr3.1:24107390-24107409 | MS.gene92659:intron | 5.0% |
| !!! | TTTTATTTTTTTTTTCATTT+AGG | - | chr3.1:24107389-24107408 | MS.gene92659:intron | 5.0% |
| AACCTCCTCACTATCGAACC+AGG | + | chr3.1:24104322-24104341 | None:intergenic | 50.0% | |
| ACCAAGCTAGTGGTCGACAT+CGG | + | chr3.1:24104840-24104859 | None:intergenic | 50.0% | |
| AGGAGTCAGTTGTGTTCAGG+TGG | - | chr3.1:24104353-24104372 | MS.gene92659:intron | 50.0% | |
| AGGTGGGGAAGAGGAAGAAA+GGG | - | chr3.1:24104195-24104214 | MS.gene92659:intron | 50.0% | |
| AGTCCAGCACTAATTGCAGG+AGG | + | chr3.1:24106291-24106310 | None:intergenic | 50.0% | |
| CCGTTACGCTGCATAAGAGA+TGG | + | chr3.1:24106649-24106668 | None:intergenic | 50.0% | |
| CGTGTTTACCAGTGAAGCAC+CGG | + | chr3.1:24106695-24106714 | None:intergenic | 50.0% | |
| GATTCGAGAATTAGGAGGGG+AGG | - | chr3.1:24107420-24107439 | MS.gene92659:intron | 50.0% | |
| GGAGTATGAAGCCTATGGCT+TGG | + | chr3.1:24104097-24104116 | None:intergenic | 50.0% | |
| GGTTTCTCAACAGGTGGCTT+TGG | - | chr3.1:24106518-24106537 | MS.gene92659:intron | 50.0% | |
| TCGAACCAAACGGACCCTTA+AGG | - | chr3.1:24107955-24107974 | MS.gene92659:CDS | 50.0% | |
| TCTTTCTCAGCGGGAAATGG+AGG | - | chr3.1:24104127-24104146 | MS.gene92659:CDS | 50.0% | |
| TGGAGGAGTCAGTTGTGTTC+AGG | - | chr3.1:24104350-24104369 | MS.gene92659:intron | 50.0% | |
| TGGCATGAAAATGGGTGCAG+AGG | + | chr3.1:24104077-24104096 | None:intergenic | 50.0% | |
| TTCGAGAATTAGGAGGGGAG+GGG | - | chr3.1:24107422-24107441 | MS.gene92659:intron | 50.0% | |
| ! | GGGGAGGGGAGGAATTTTAA+CGG | - | chr3.1:24107441-24107460 | MS.gene92659:intron | 50.0% |
| ! | GGTGCTATAGTGGTAGGTGT+TGG | - | chr3.1:24106573-24106592 | MS.gene92659:intron | 50.0% |
| ! | GTGTTTGGTTCACAAGGGGA+GGG | - | chr3.1:24107498-24107517 | MS.gene92659:intron | 50.0% |
| ! | TGTGTTTGGTTCACAAGGGG+AGG | - | chr3.1:24107497-24107516 | MS.gene92659:intron | 50.0% |
| ! | TGTTTGGTTCACAAGGGGAG+GGG | - | chr3.1:24107499-24107518 | MS.gene92659:intron | 50.0% |
| ! | TTCCTGGTTCGATAGTGAGG+AGG | - | chr3.1:24104317-24104336 | MS.gene92659:intron | 50.0% |
| ! | TTGGCTGTTGCTGTTAAGGC+GGG | - | chr3.1:24104289-24104308 | MS.gene92659:intron | 50.0% |
| !! | GAGGAATTTTAACGGAGGGG+AGG | - | chr3.1:24107449-24107468 | MS.gene92659:intron | 50.0% |
| !! | GAGGGGAGGAATTTTAACGG+AGG | - | chr3.1:24107444-24107463 | MS.gene92659:intron | 50.0% |
| !! | GGAATTTTAACGGAGGGGAG+GGG | - | chr3.1:24107451-24107470 | MS.gene92659:intron | 50.0% |
| !! | GGGGAGGAATTTTAACGGAG+GGG | - | chr3.1:24107446-24107465 | MS.gene92659:intron | 50.0% |
| !! | GGTGGGTGGATTTTGCTAGA+TGG | - | chr3.1:24108214-24108233 | MS.gene92659:CDS | 50.0% |
| !! | TTTTCAGGCTGCTGCAGAGT+TGG | - | chr3.1:24105282-24105301 | MS.gene92659:intron | 50.0% |
| !! | TTTTTAGAAGGGGAGGGGAG+GGG | + | chr3.1:24107882-24107901 | None:intergenic | 50.0% |
| !!! | TTCGAGAGTTTTGGAGGGGA+GGG | + | chr3.1:24107940-24107959 | None:intergenic | 50.0% |
| AACTGGACACTGTCGCGTGT+CGG | + | chr3.1:24104777-24104796 | None:intergenic | 55.0% | |
| ACAGCAACAGCCAAATCCGC+CGG | + | chr3.1:24104283-24104302 | None:intergenic | 55.0% | |
| AGAATTAGGAGGGGAGGGGA+GGG | - | chr3.1:24107426-24107445 | MS.gene92659:intron | 55.0% | |
| AGTTGGAACCGGTGCTTCAC+TGG | - | chr3.1:24106684-24106703 | MS.gene92659:intron | 55.0% | |
| CCAGCACTAATTGCAGGAGG+AGG | + | chr3.1:24106288-24106307 | None:intergenic | 55.0% | |
| CCTCCTCCTGCAATTAGTGC+TGG | - | chr3.1:24106285-24106304 | MS.gene92659:intron | 55.0% | |
| GAAAATGGGTGCAGAGGCAG+AGG | + | chr3.1:24104071-24104090 | None:intergenic | 55.0% | |
| GAGGTGGGGAAGAGGAAGAA+AGG | - | chr3.1:24104194-24104213 | MS.gene92659:intron | 55.0% | |
| GGGGCAAAGCTGTTCGTAGT+TGG | - | chr3.1:24106667-24106686 | MS.gene92659:intron | 55.0% | |
| GTCGATGGAGAGATTTCCGG+CGG | - | chr3.1:24104264-24104283 | MS.gene92659:intron | 55.0% | |
| TCCGATGTCGACCACTAGCT+TGG | - | chr3.1:24104836-24104855 | MS.gene92659:intron | 55.0% | |
| TTCTCAGCGGGAAATGGAGG+CGG | - | chr3.1:24104130-24104149 | MS.gene92659:CDS | 55.0% | |
| ! | GAAATGGAGGCGGGTTTCCA+GGG | - | chr3.1:24104140-24104159 | MS.gene92659:CDS | 55.0% |
| ! | GGAGAGATTTCCGGCGGATT+TGG | - | chr3.1:24104270-24104289 | MS.gene92659:intron | 55.0% |
| ! | GGGTTCCTGGTTCGATAGTG+AGG | - | chr3.1:24104314-24104333 | MS.gene92659:intron | 55.0% |
| ! | TGGCTGTTGCTGTTAAGGCG+GGG | - | chr3.1:24104290-24104309 | MS.gene92659:intron | 55.0% |
| ! | TTTTAACGGAGGGGAGGGGA+GGG | - | chr3.1:24107455-24107474 | MS.gene92659:intron | 55.0% |
| !! | AACTTCATGGCGGGCTGTGA+TGG | + | chr3.1:24104017-24104036 | None:intergenic | 55.0% |
| !! | ATTTTAACGGAGGGGAGGGG+AGG | - | chr3.1:24107454-24107473 | MS.gene92659:intron | 55.0% |
| !! | TCTCAACAGGTGGCTTTGGC+AGG | - | chr3.1:24106522-24106541 | MS.gene92659:intron | 55.0% |
| !!! | ATGCTGGTTTTGGCAGAGGC+TGG | - | chr3.1:24104238-24104257 | MS.gene92659:intron | 55.0% |
| !!! | GGCAATGCTGGTTTTGGCAG+AGG | - | chr3.1:24104234-24104253 | MS.gene92659:intron | 55.0% |
| !!! | GTTCGAGAGTTTTGGAGGGG+AGG | + | chr3.1:24107941-24107960 | None:intergenic | 55.0% |
| !!! | TCGAGAGTTTTGGAGGGGAG+GGG | + | chr3.1:24107939-24107958 | None:intergenic | 55.0% |
| !!! | TGGTTTTGGCAGAGGCTGGT+AGG | - | chr3.1:24104242-24104261 | MS.gene92659:intron | 55.0% |
| AGGCTGCTGCAGAGTTGGAG+CGG | - | chr3.1:24105287-24105306 | MS.gene92659:intron | 60.0% | |
| GAATTAGGAGGGGAGGGGAG+GGG | - | chr3.1:24107427-24107446 | MS.gene92659:intron | 60.0% | |
| GAGAATTAGGAGGGGAGGGG+AGG | - | chr3.1:24107425-24107444 | MS.gene92659:intron | 60.0% | |
| TCTCAGCGGGAAATGGAGGC+GGG | - | chr3.1:24104131-24104150 | MS.gene92659:CDS | 60.0% | |
| TGGTTCACAAGGGGAGGGGA+GGG | - | chr3.1:24107503-24107522 | MS.gene92659:intron | 60.0% | |
| TTGGTTCACAAGGGGAGGGG+AGG | - | chr3.1:24107502-24107521 | MS.gene92659:intron | 60.0% | |
| TTTAACGGAGGGGAGGGGAG+GGG | - | chr3.1:24107456-24107475 | MS.gene92659:intron | 60.0% | |
| TTTCCAGGGAGTGGAGGTGG+TGG | - | chr3.1:24104154-24104173 | MS.gene92659:CDS | 60.0% | |
| ! | CGGGCTGTGATGGTGTAGCT+GGG | + | chr3.1:24104007-24104026 | None:intergenic | 60.0% |
| ! | CTGTTGCTGTTAAGGCGGGG+CGG | - | chr3.1:24104293-24104312 | MS.gene92659:intron | 60.0% |
| ! | GGAAATGGAGGCGGGTTTCC+AGG | - | chr3.1:24104139-24104158 | MS.gene92659:CDS | 60.0% |
| ! | TGTTGCTGTTAAGGCGGGGC+GGG | - | chr3.1:24104294-24104313 | MS.gene92659:intron | 60.0% |
| !!! | AGAGTTTTGGAGGGGAGGGG+AGG | + | chr3.1:24107936-24107955 | None:intergenic | 60.0% |
| !!! | AGTTTTGGAGGGGAGGGGAG+GGG | + | chr3.1:24107934-24107953 | None:intergenic | 60.0% |
| !!! | GAGTTTTGGAGGGGAGGGGA+GGG | + | chr3.1:24107935-24107954 | None:intergenic | 60.0% |
| GGCAGAGGCTGGTAGGTCGA+TGG | - | chr3.1:24104249-24104268 | MS.gene92659:intron | 65.0% | |
| GGGTTTCCAGGGAGTGGAGG+TGG | - | chr3.1:24104151-24104170 | MS.gene92659:CDS | 65.0% | |
| TGACGGTGGAGGTGGGGAAG+AGG | - | chr3.1:24104186-24104205 | MS.gene92659:intron | 65.0% | |
| TTAGAAGGGGAGGGGAGGGG+CGG | + | chr3.1:24107879-24107898 | None:intergenic | 65.0% | |
| ! | GCGGGCTGTGATGGTGTAGC+TGG | + | chr3.1:24104008-24104027 | None:intergenic | 65.0% |
| ! | GTGGGGATGACGGTGGAGGT+GGG | - | chr3.1:24104179-24104198 | MS.gene92659:intron | 65.0% |
| ! | TGGGGATGACGGTGGAGGTG+GGG | - | chr3.1:24104180-24104199 | MS.gene92659:intron | 65.0% |
| !! | GAGTGGAGGTGGTGGTGGTG+GGG | - | chr3.1:24104162-24104181 | MS.gene92659:intron | 65.0% |
| !! | GGAGTGGAGGTGGTGGTGGT+GGG | - | chr3.1:24104161-24104180 | MS.gene92659:intron | 65.0% |
| !! | GGTGGTGGTGGTGGGGATGA+CGG | - | chr3.1:24104169-24104188 | MS.gene92659:intron | 65.0% |
| CCACCACCACCTCCACTCCC+TGG | + | chr3.1:24104160-24104179 | None:intergenic | 70.0% | |
| TAGAAGGGGAGGGGAGGGGC+GGG | + | chr3.1:24107878-24107897 | None:intergenic | 70.0% | |
| TTAGGAGGGGAGGGGAGGGG+AGG | - | chr3.1:24107430-24107449 | MS.gene92659:intron | 70.0% | |
| ! | CCAGGGAGTGGAGGTGGTGG+TGG | - | chr3.1:24104157-24104176 | MS.gene92659:intron | 70.0% |
| ! | GGAGGCGGGTTTCCAGGGAG+TGG | - | chr3.1:24104145-24104164 | MS.gene92659:CDS | 70.0% |
| ! | GGCGGGTTTCCAGGGAGTGG+AGG | - | chr3.1:24104148-24104167 | MS.gene92659:CDS | 70.0% |
| ! | GGTGGGGATGACGGTGGAGG+TGG | - | chr3.1:24104178-24104197 | MS.gene92659:intron | 70.0% |
| ! | GTTAAGGCGGGGCGGGTTCC+TGG | - | chr3.1:24104301-24104320 | MS.gene92659:intron | 70.0% |
| !! | GGGAGTGGAGGTGGTGGTGG+TGG | - | chr3.1:24104160-24104179 | MS.gene92659:intron | 70.0% |
| !! | GGTGGTGGGGATGACGGTGG+AGG | - | chr3.1:24104175-24104194 | MS.gene92659:intron | 70.0% |
| !! | GGTGGTGGTGGGGATGACGG+TGG | - | chr3.1:24104172-24104191 | MS.gene92659:intron | 70.0% |
| AGAAGGGGAGGGGAGGGGCG+GGG | + | chr3.1:24107877-24107896 | None:intergenic | 75.0% | |
| ! | AGGGGAGGGGAGGGGCGGGG+AGG | + | chr3.1:24107874-24107893 | None:intergenic | 85.0% |
| ! | GGGAGGGGAGGGGCGGGGAG+GGG | + | chr3.1:24107872-24107891 | None:intergenic | 85.0% |
| ! | GGGGAGGGGAGGGGCGGGGA+GGG | + | chr3.1:24107873-24107892 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 24103908 | 24108263 | 24103908 | ID=MS.gene92659 |
| chr3.1 | mRNA | 24103908 | 24108263 | 24103908 | ID=MS.gene92659.t1;Parent=MS.gene92659 |
| chr3.1 | exon | 24107700 | 24108263 | 24107700 | ID=MS.gene92659.t1.exon1;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24107700 | 24108263 | 24107700 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24106814 | 24106882 | 24106814 | ID=MS.gene92659.t1.exon2;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24106814 | 24106882 | 24106814 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24105818 | 24105949 | 24105818 | ID=MS.gene92659.t1.exon3;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24105818 | 24105949 | 24105818 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24105587 | 24105640 | 24105587 | ID=MS.gene92659.t1.exon4;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24105587 | 24105640 | 24105587 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24105466 | 24105510 | 24105466 | ID=MS.gene92659.t1.exon5;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24105466 | 24105510 | 24105466 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24105066 | 24105199 | 24105066 | ID=MS.gene92659.t1.exon6;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24105066 | 24105199 | 24105066 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24104050 | 24104175 | 24104050 | ID=MS.gene92659.t1.exon7;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24104050 | 24104175 | 24104050 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| chr3.1 | exon | 24103908 | 24103956 | 24103908 | ID=MS.gene92659.t1.exon8;Parent=MS.gene92659.t1 |
| chr3.1 | CDS | 24103908 | 24103956 | 24103908 | ID=cds.MS.gene92659.t1;Parent=MS.gene92659.t1 |
| Gene Sequence |
| Protein sequence |
