Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94661.t1 | XP_003617641.1 | 96.9 | 458 | 14 | 0 | 2 | 459 | 103 | 560 | 4.10E-247 | 863.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94661.t1 | Q8S9L5 | 66.2 | 461 | 155 | 1 | 1 | 460 | 87 | 547 | 3.3e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94661.t1 | G7K8P7 | 96.9 | 458 | 14 | 0 | 2 | 459 | 103 | 560 | 3.0e-247 | 863.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene94661 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene94661 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene94661 | 0.823494 | 1.34E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene94661 | 0.833025 | 6.76E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene94661 | 0.880553 | 4.99E-70 | -1.69E-46 |
| MS.gene049389 | MS.gene94661 | 0.803096 | 4.10E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene94661 | 0.827263 | 1.72E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene94661 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene94661 | 0.816447 | 5.50E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene94661 | 0.818262 | 2.15E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene94661 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene94661 | 0.855872 | 4.71E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene94661 | 0.831086 | 2.04E-55 | -1.69E-46 |
| MS.gene049993 | MS.gene94661 | 0.820719 | 5.91E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene94661 | 0.843296 | 1.53E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene94661 | 0.873355 | 1.57E-67 | -1.69E-46 |
| MS.gene050231 | MS.gene94661 | 0.832032 | 1.19E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene94661 | 0.908701 | 1.28E-81 | -1.69E-46 |
| MS.gene050397 | MS.gene94661 | 0.868191 | 7.84E-66 | -1.69E-46 |
| MS.gene050400 | MS.gene94661 | 0.808613 | 2.84E-50 | -1.69E-46 |
| MS.gene050404 | MS.gene94661 | 0.805428 | 1.34E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene94661 | 0.851791 | 7.05E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene94661 | -0.826366 | 2.82E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene94661 | 0.838778 | 2.35E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene94661 | 0.885354 | 8.74E-72 | -1.69E-46 |
| MS.gene050529 | MS.gene94661 | 0.878135 | 3.59E-69 | -1.69E-46 |
| MS.gene050558 | MS.gene94661 | 0.84975 | 2.65E-60 | -1.69E-46 |
| MS.gene050560 | MS.gene94661 | 0.807828 | 4.18E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene94661 | 0.824227 | 9.05E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene94661 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene94661 | 0.871209 | 8.13E-67 | -1.69E-46 |
| MS.gene050783 | MS.gene94661 | 0.852294 | 5.07E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene94661 | 0.875617 | 2.68E-68 | -1.69E-46 |
| MS.gene05101 | MS.gene94661 | 0.895282 | 1.11E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene94661 | 0.83556 | 1.56E-56 | -1.69E-46 |
| MS.gene051171 | MS.gene94661 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene051240 | MS.gene94661 | 0.826099 | 3.27E-54 | -1.69E-46 |
| MS.gene051242 | MS.gene94661 | 0.838891 | 2.20E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene94661 | 0.8403 | 9.45E-58 | -1.69E-46 |
| MS.gene051471 | MS.gene94661 | 0.857665 | 1.40E-62 | -1.69E-46 |
| MS.gene051525 | MS.gene94661 | 0.883374 | 4.74E-71 | -1.69E-46 |
| MS.gene051582 | MS.gene94661 | 0.894109 | 3.36E-75 | -1.69E-46 |
| MS.gene051662 | MS.gene94661 | 0.812367 | 4.39E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene94661 | 0.846175 | 2.56E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene94661 | 0.849139 | 3.92E-60 | -1.69E-46 |
| MS.gene051877 | MS.gene94661 | 0.816295 | 5.95E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene94661 | 0.827956 | 1.17E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene94661 | -0.870713 | 1.19E-66 | -1.69E-46 |
| MS.gene052077 | MS.gene94661 | 0.828642 | 8.03E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene94661 | 0.866937 | 1.98E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene94661 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene94661 | 0.868447 | 6.49E-66 | -1.69E-46 |
| MS.gene052207 | MS.gene94661 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene94661 | 0.872427 | 3.21E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene94661 | 0.88557 | 7.25E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene94661 | 0.833548 | 5.01E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene94661 | 0.856029 | 4.24E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene94661 | 0.870389 | 1.51E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene94661 | 0.804972 | 1.67E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene94661 | 0.84071 | 7.38E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene94661 | 0.856802 | 2.52E-62 | -1.69E-46 |
| MS.gene052600 | MS.gene94661 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene94661 | 0.820458 | 6.79E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene94661 | 0.80497 | 1.67E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene94661 | 0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene94661 | 0.826405 | 2.76E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene94661 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene94661 | 0.842403 | 2.64E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene94661 | 0.853104 | 2.98E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene94661 | 0.892977 | 9.64E-75 | -1.69E-46 |
| MS.gene053907 | MS.gene94661 | 0.847938 | 8.42E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene94661 | 0.870436 | 1.46E-66 | -1.69E-46 |
| MS.gene053971 | MS.gene94661 | 0.866979 | 1.92E-65 | -1.69E-46 |
| MS.gene054010 | MS.gene94661 | 0.819612 | 1.06E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene94661 | 0.818174 | 2.25E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene94661 | 0.823797 | 1.14E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene94661 | 0.820156 | 7.96E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene94661 | 0.846177 | 2.56E-59 | -1.69E-46 |
| MS.gene054183 | MS.gene94661 | 0.842386 | 2.67E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene94661 | 0.817424 | 3.32E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene94661 | 0.805901 | 1.07E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene94661 | 0.836039 | 1.18E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene94661 | 0.817541 | 3.13E-52 | -1.69E-46 |
| MS.gene05455 | MS.gene94661 | 0.862968 | 3.48E-64 | -1.69E-46 |
| MS.gene054719 | MS.gene94661 | 0.869253 | 3.56E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene94661 | 0.826736 | 2.30E-54 | -1.69E-46 |
| MS.gene054803 | MS.gene94661 | 0.82416 | 9.38E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene94661 | 0.825501 | 4.53E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene94661 | 0.833942 | 3.99E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene94661 | 0.833605 | 4.85E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene94661 | 0.873943 | 9.93E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene94661 | 0.884668 | 1.58E-71 | -1.69E-46 |
| MS.gene055369 | MS.gene94661 | 0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene94661 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene94661 | 0.868801 | 4.98E-66 | -1.69E-46 |
| MS.gene055412 | MS.gene94661 | 0.82037 | 7.11E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene94661 | 0.88417 | 2.41E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene94661 | 0.899957 | 1.18E-77 | -1.69E-46 |
| MS.gene055539 | MS.gene94661 | 0.805939 | 1.05E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene94661 | 0.881137 | 3.08E-70 | -1.69E-46 |
| MS.gene055564 | MS.gene94661 | 0.823598 | 1.27E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene94661 | 0.842807 | 2.06E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene94661 | 0.830992 | 2.15E-55 | -1.69E-46 |
| MS.gene05594 | MS.gene94661 | 0.82978 | 4.25E-55 | -1.69E-46 |
| MS.gene055971 | MS.gene94661 | 0.853798 | 1.88E-61 | -1.69E-46 |
| MS.gene056191 | MS.gene94661 | 0.853353 | 2.53E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene94661 | 0.90481 | 8.31E-80 | -1.69E-46 |
| MS.gene056410 | MS.gene94661 | 0.832548 | 8.88E-56 | -1.69E-46 |
| MS.gene056451 | MS.gene94661 | 0.854842 | 9.40E-62 | -1.69E-46 |
| MS.gene056452 | MS.gene94661 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene94661 | 0.879726 | 9.85E-70 | -1.69E-46 |
| MS.gene056659 | MS.gene94661 | 0.83487 | 2.33E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene94661 | 0.842089 | 3.20E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene94661 | 0.871938 | 4.66E-67 | -1.69E-46 |
| MS.gene056899 | MS.gene94661 | -0.830889 | 2.28E-55 | -1.69E-46 |
| MS.gene056902 | MS.gene94661 | 0.823127 | 1.64E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene94661 | 0.822345 | 2.49E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene94661 | 0.848785 | 4.91E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene94661 | 0.877963 | 4.12E-69 | -1.69E-46 |
| MS.gene057121 | MS.gene94661 | 0.899509 | 1.85E-77 | -1.69E-46 |
| MS.gene057123 | MS.gene94661 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene94661 | 0.815052 | 1.13E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene94661 | 0.827028 | 1.96E-54 | -1.69E-46 |
| MS.gene057196 | MS.gene94661 | 0.816623 | 5.03E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene94661 | 0.843811 | 1.11E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene94661 | 0.82314 | 1.63E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene94661 | 0.82197 | 3.04E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene94661 | 0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene94661 | 0.820245 | 7.59E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene94661 | 0.810369 | 1.19E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene94661 | 0.821352 | 4.23E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene94661 | 0.823173 | 1.60E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene94661 | 0.825502 | 4.53E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene94661 | 0.866343 | 3.06E-65 | -1.69E-46 |
| MS.gene057823 | MS.gene94661 | 0.862511 | 4.81E-64 | -1.69E-46 |
| MS.gene057825 | MS.gene94661 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene057888 | MS.gene94661 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene94661 | 0.915952 | 3.19E-85 | -1.69E-46 |
| MS.gene058007 | MS.gene94661 | 0.801321 | 9.52E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene94661 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene94661 | 0.906521 | 1.36E-80 | -1.69E-46 |
| MS.gene058142 | MS.gene94661 | 0.888066 | 8.21E-73 | -1.69E-46 |
| MS.gene058233 | MS.gene94661 | 0.888564 | 5.28E-73 | -1.69E-46 |
| MS.gene058276 | MS.gene94661 | 0.890868 | 6.67E-74 | -1.69E-46 |
| MS.gene058293 | MS.gene94661 | 0.881835 | 1.72E-70 | -1.69E-46 |
| MS.gene058365 | MS.gene94661 | 0.834684 | 2.60E-56 | -1.69E-46 |
| MS.gene05842 | MS.gene94661 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene94661 | 0.822759 | 1.99E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene94661 | 0.892675 | 1.28E-74 | -1.69E-46 |
| MS.gene058700 | MS.gene94661 | 0.833512 | 5.11E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene94661 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene058746 | MS.gene94661 | 0.823359 | 1.44E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene94661 | 0.814705 | 1.34E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene94661 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene94661 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene058845 | MS.gene94661 | 0.815408 | 9.39E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene94661 | 0.86838 | 6.82E-66 | -1.69E-46 |
| MS.gene058928 | MS.gene94661 | 0.805468 | 1.32E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene94661 | 0.831654 | 1.48E-55 | -1.69E-46 |
| MS.gene059011 | MS.gene94661 | 0.806861 | 6.70E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene94661 | 0.92258 | 8.17E-89 | -1.69E-46 |
| MS.gene059082 | MS.gene94661 | 0.801849 | 7.42E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene94661 | 0.869473 | 3.02E-66 | -1.69E-46 |
| MS.gene059247 | MS.gene94661 | 0.821243 | 4.48E-53 | -1.69E-46 |
| MS.gene059294 | MS.gene94661 | 0.813561 | 2.40E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene94661 | 0.812088 | 5.06E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene94661 | 0.870891 | 1.04E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene94661 | 0.810996 | 8.73E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene94661 | 0.863405 | 2.55E-64 | -1.69E-46 |
| MS.gene059536 | MS.gene94661 | 0.818829 | 1.60E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene94661 | 0.871319 | 7.48E-67 | -1.69E-46 |
| MS.gene05959 | MS.gene94661 | 0.830274 | 3.22E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene94661 | 0.883922 | 2.98E-71 | -1.69E-46 |
| MS.gene059688 | MS.gene94661 | 0.869722 | 2.50E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene94661 | 0.875044 | 4.20E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene94661 | 0.875521 | 2.89E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene94661 | 0.87728 | 7.13E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene94661 | 0.871988 | 4.49E-67 | -1.69E-46 |
| MS.gene059960 | MS.gene94661 | 0.832194 | 1.09E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene94661 | 0.834903 | 2.29E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene94661 | 0.847527 | 1.09E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene94661 | 0.882733 | 8.13E-71 | -1.69E-46 |
| MS.gene06090 | MS.gene94661 | 0.863524 | 2.34E-64 | -1.69E-46 |
| MS.gene060986 | MS.gene94661 | 0.811705 | 6.13E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene94661 | 0.885416 | 8.29E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene94661 | -0.811763 | 5.95E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene94661 | 0.843879 | 1.07E-58 | -1.69E-46 |
| MS.gene061159 | MS.gene94661 | 0.840115 | 1.06E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene94661 | 0.8018 | 7.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94661.t1 | MTR_5g093830 | 96.943 | 458 | 14 | 0 | 2 | 459 | 103 | 560 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94661.t1 | AT5G55220 | 66.161 | 461 | 155 | 1 | 1 | 460 | 87 | 547 | 0.0 | 650 |
Find 79 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCCTTGATTCTATAAT+TGG | 0.141614 | 5.3:+75926721 | MS.gene94661:CDS |
| TCAGAAATCCATTTAATTTC+TGG | 0.168583 | 5.3:-75926035 | None:intergenic |
| ATGTTGCACCAGAAATTAAA+TGG | 0.259733 | 5.3:+75926027 | MS.gene94661:CDS |
| ATTATTCTCTCGGATATCTT+AGG | 0.278137 | 5.3:+75925782 | MS.gene94661:CDS |
| TCAATACCTGCATTTCTAAT+AGG | 0.299634 | 5.3:-75927667 | None:intergenic |
| GGTTACTGGAAGGGCTTTGC+AGG | 0.317659 | 5.3:+75925714 | MS.gene94661:intron |
| CTTGATTCTATAATTGGAAT+TGG | 0.335719 | 5.3:+75926727 | MS.gene94661:CDS |
| AAGATATCCGAGAGAATAAT+AGG | 0.339434 | 5.3:-75925779 | None:intergenic |
| TATATTAGATCAGATTTCTA+AGG | 0.345020 | 5.3:+75927339 | MS.gene94661:CDS |
| TAGCTGTTTGCTCTATCTCT+TGG | 0.360719 | 5.3:-75927294 | None:intergenic |
| AGTAACACATACTCTGGAAT+TGG | 0.365055 | 5.3:-75924102 | None:intergenic |
| AGTATTCTTGTTGGTTATGT+GGG | 0.365092 | 5.3:+75925148 | MS.gene94661:CDS |
| CCGTCTTCCTGCTGAATTGA+AGG | 0.365791 | 5.3:+75924061 | MS.gene94661:CDS |
| AGATATTCATTCACGGACTT+TGG | 0.385184 | 5.3:-75927862 | None:intergenic |
| TGGCAGTTGGTGACATATAT+AGG | 0.388142 | 5.3:+75927929 | MS.gene94661:CDS |
| TAACCAACAAGAATACTTTC+CGG | 0.396552 | 5.3:-75925142 | None:intergenic |
| GAACAAGGTAGACAGCTATA+TGG | 0.427214 | 5.3:+75927638 | MS.gene94661:CDS |
| AACCAACAAGAATACTTTCC+GGG | 0.427325 | 5.3:-75925141 | None:intergenic |
| TGGATGTACCACAGTGCAAC+AGG | 0.439789 | 5.3:+75927143 | MS.gene94661:CDS |
| AAGTATTCTTGTTGGTTATG+TGG | 0.444352 | 5.3:+75925147 | MS.gene94661:CDS |
| GTCCCGGAAAGTATTCTTGT+TGG | 0.452137 | 5.3:+75925139 | MS.gene94661:CDS |
| CGAACTTTGTAAACTCAACT+AGG | 0.456526 | 5.3:-75924759 | None:intergenic |
| TTACAGAGATTTACCAGAGC+TGG | 0.456759 | 5.3:+75927092 | MS.gene94661:CDS |
| TGTTGCACTGTGGTACATCC+AGG | 0.475737 | 5.3:-75927141 | None:intergenic |
| ATTGAAGGTCACTGAGACAA+AGG | 0.476315 | 5.3:+75924076 | MS.gene94661:CDS |
| CGAGGAACGTGTAAAGGAAC+AGG | 0.479197 | 5.3:+75928276 | MS.gene94661:CDS |
| TGAATATCTTGAGCATCATA+AGG | 0.481148 | 5.3:+75927876 | MS.gene94661:CDS |
| TACCTGCATTTCTAATAGGC+TGG | 0.492031 | 5.3:-75927663 | None:intergenic |
| AAAACTAACTGAAGAGCAGC+TGG | 0.495940 | 5.3:+75927825 | MS.gene94661:CDS |
| ATCCAGCCTATTAGAAATGC+AGG | 0.500445 | 5.3:+75927661 | MS.gene94661:CDS |
| ATACGACGAGGAACGTGTAA+AGG | 0.502907 | 5.3:+75928270 | MS.gene94661:CDS |
| ATTCCTTCTGCTGAAAGTAA+AGG | 0.519175 | 5.3:+75926551 | MS.gene94661:CDS |
| GAGGATACCTATTATTCTCT+CGG | 0.520497 | 5.3:+75925772 | MS.gene94661:CDS |
| TGTTACTGACAGAGGACTAC+AGG | 0.522402 | 5.3:+75926172 | MS.gene94661:CDS |
| AAGGAGCTAAGGTGCTAGAA+TGG | 0.522425 | 5.3:+75928737 | MS.gene94661:CDS |
| GCAATAGAATCATCCAGCTC+TGG | 0.523626 | 5.3:-75927105 | None:intergenic |
| CTACCTTTACTTTCAGCAGA+AGG | 0.525053 | 5.3:-75926554 | None:intergenic |
| TCTATAATTGGAATTGGTCG+AGG | 0.525412 | 5.3:+75926733 | MS.gene94661:CDS |
| TCAGTGACCTTCAATTCAGC+AGG | 0.527113 | 5.3:-75924068 | None:intergenic |
| AGAAGGCGTTACAAGTCAGC+TGG | 0.527767 | 5.3:+75926137 | MS.gene94661:CDS |
| AAGAGATAGAGCAAACAGCT+AGG | 0.529180 | 5.3:+75927296 | MS.gene94661:CDS |
| CAATTCCAATTATAGAATCA+AGG | 0.531449 | 5.3:-75926726 | None:intergenic |
| GATATTTGATTCTTGATCAA+CGG | 0.532623 | 5.3:-75926522 | None:intergenic |
| TATATATGTCACCAACTGCC+AGG | 0.537928 | 5.3:-75927927 | None:intergenic |
| CAGGTACCTGGATTTCGTCC+TGG | 0.538561 | 5.3:+75925109 | MS.gene94661:intron |
| ATTGCTGATAAACTTATCCC+TGG | 0.539379 | 5.3:+75927123 | MS.gene94661:CDS |
| TGTTCATCAAACAAGGATTG+AGG | 0.541311 | 5.3:-75927620 | None:intergenic |
| ATGCTCAAGATATTCATTCA+CGG | 0.543020 | 5.3:-75927869 | None:intergenic |
| AAGGTTCAAGAAATACTAGA+AGG | 0.544740 | 5.3:+75928718 | MS.gene94661:intron |
| GCATGTGGAGGTACCATCAC+TGG | 0.547973 | 5.3:+75924711 | MS.gene94661:CDS |
| CAATCCTTGTTTGATGAACA+AGG | 0.549416 | 5.3:+75927623 | MS.gene94661:CDS |
| ATCAAACAGAACCTGGCAGT+TGG | 0.559239 | 5.3:+75927916 | MS.gene94661:CDS |
| AGAAATACTAGAAGGAGCTA+AGG | 0.563256 | 5.3:+75928726 | MS.gene94661:CDS |
| TTGACGTTTGAATTCAGCAA+TGG | 0.576175 | 5.3:-75928239 | None:intergenic |
| ATATAGGCGTGAAAATATGC+AGG | 0.579562 | 5.3:+75927945 | MS.gene94661:CDS |
| AAATTTGATCAAACAGAACC+TGG | 0.587535 | 5.3:+75927909 | MS.gene94661:CDS |
| GTATTCTTGTTGGTTATGTG+GGG | 0.588330 | 5.3:+75925149 | MS.gene94661:CDS |
| CTACGATCGAATCAATATTG+AGG | 0.589271 | 5.3:+75925191 | MS.gene94661:CDS |
| AGAGATAGAGCAAACAGCTA+GGG | 0.589916 | 5.3:+75927297 | MS.gene94661:CDS |
| TCTACCTTGTTCATCAAACA+AGG | 0.591447 | 5.3:-75927627 | None:intergenic |
| ATGCGAGGACTGTTACGAAA+GGG | 0.596481 | 5.3:+75924735 | MS.gene94661:CDS |
| ATTATAGAATCAAGGAAACC+TGG | 0.599565 | 5.3:-75926718 | None:intergenic |
| TGAGTTTACAAAGTTCGCCA+AGG | 0.601858 | 5.3:+75924765 | MS.gene94661:CDS |
| CAGTCCTCGCATACCAGTGA+TGG | 0.604531 | 5.3:-75924724 | None:intergenic |
| TCTTTGATGATGTCTTCAGT+AGG | 0.610103 | 5.3:-75928205 | None:intergenic |
| TAAACTGAGCATGAACACCT+TGG | 0.610469 | 5.3:-75926810 | None:intergenic |
| TACTGAAGACATCATCAAAG+AGG | 0.612818 | 5.3:+75928207 | MS.gene94661:CDS |
| GATGGTGAAATATTAGTACC+AGG | 0.615164 | 5.3:+75926700 | MS.gene94661:CDS |
| ACTTTCACACGCTGTAACAG+CGG | 0.616868 | 5.3:+75925219 | MS.gene94661:CDS |
| CTGAAAGTTGTTACTGACAG+AGG | 0.619184 | 5.3:+75926164 | MS.gene94661:CDS |
| CCTGCAGGTTAGATTGCATG+TGG | 0.627284 | 5.3:+75924696 | MS.gene94661:intron |
| CCTTCAATTCAGCAGGAAGA+CGG | 0.628013 | 5.3:-75924061 | None:intergenic |
| TATGCGAGGACTGTTACGAA+AGG | 0.650131 | 5.3:+75924734 | MS.gene94661:CDS |
| GTTGCACTGTGGTACATCCA+GGG | 0.654086 | 5.3:-75927140 | None:intergenic |
| CGATCGAATCAATATTGAGG+AGG | 0.656634 | 5.3:+75925194 | MS.gene94661:CDS |
| TGGAAGCAGGAAAATCTCCA+AGG | 0.665686 | 5.3:+75926793 | MS.gene94661:CDS |
| GCAGGTTAGATTGCATGTGG+AGG | 0.673127 | 5.3:+75924699 | MS.gene94661:intron |
| GGTACCATCACTGGTATGCG+AGG | 0.674391 | 5.3:+75924720 | MS.gene94661:CDS |
| AAAAGTCACCTGTTGCACTG+TGG | 0.753690 | 5.3:-75927151 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTACATAATATTTTTTATTT+CGG | - | chr5.3:75928386-75928405 | None:intergenic | 10.0% |
| !!! | TATAATCAATTTTGTTTTAT+AGG | + | chr5.3:75925693-75925712 | MS.gene94661:intron | 10.0% |
| !! | AAAATACATATAAAAGGAAA+TGG | - | chr5.3:75926416-75926435 | None:intergenic | 15.0% |
| !! | AGTCTATTTAGTAAATTATT+TGG | + | chr5.3:75928141-75928160 | MS.gene94661:intron | 15.0% |
| !! | TATCAATCAATCTTTAAATT+AGG | - | chr5.3:75928677-75928696 | None:intergenic | 15.0% |
| !!! | TATATGGTAATATTTTGATA+TGG | + | chr5.3:75924176-75924195 | MS.gene94661:intron | 15.0% |
| !!! | TTCTAAATAATGGAATATAA+AGG | + | chr5.3:75928495-75928514 | MS.gene94661:intron | 15.0% |
| !!! | TTTTTTTTTCCTTTAAATGT+TGG | - | chr5.3:75927735-75927754 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTTCTTTTTC+TGG | + | chr5.3:75927508-75927527 | MS.gene94661:intron | 15.0% |
| !! | AAAAAAAATACTATGCAAGT+AGG | - | chr5.3:75928444-75928463 | None:intergenic | 20.0% |
| !! | AAAGTTATTACTGAAAAATG+TGG | + | chr5.3:75925627-75925646 | MS.gene94661:intron | 20.0% |
| !! | ATACTCATAAAATAGAGAAA+AGG | + | chr5.3:75925891-75925910 | MS.gene94661:intron | 20.0% |
| !! | ATGATTTCTGATATCTAAAT+TGG | + | chr5.3:75924909-75924928 | MS.gene94661:intron | 20.0% |
| !! | GAGATGTATATTCTAAATAA+TGG | + | chr5.3:75928485-75928504 | MS.gene94661:intron | 20.0% |
| !! | TAGTAAACTTGTATATGATA+TGG | - | chr5.3:75925013-75925032 | None:intergenic | 20.0% |
| !! | TATATTAGATCAGATTTCTA+AGG | + | chr5.3:75927339-75927358 | MS.gene94661:CDS | 20.0% |
| !! | TTAAGAAACCACATTAAAAA+TGG | - | chr5.3:75926248-75926267 | None:intergenic | 20.0% |
| !! | TTTATGAGTATAGATAACTT+TGG | - | chr5.3:75925882-75925901 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTATAGGTTAC+TGG | + | chr5.3:75925700-75925719 | MS.gene94661:intron | 20.0% |
| !!! | ACATTTTTCAGTAATAACTT+TGG | - | chr5.3:75925628-75925647 | None:intergenic | 20.0% |
| !!! | AGTTACTAAATTTTCTGATA+TGG | + | chr5.3:75925750-75925769 | MS.gene94661:CDS | 20.0% |
| !!! | ATTATGTACCGTTTTTAAAA+TGG | + | chr5.3:75928397-75928416 | MS.gene94661:intron | 20.0% |
| !!! | ATTGTTCTTAGTTTGTATTT+GGG | - | chr5.3:75928530-75928549 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTTCAAAGTAATC+TGG | + | chr5.3:75924485-75924504 | MS.gene94661:intron | 20.0% |
| !!! | TTTCTTTTCCATTTTTAATG+TGG | + | chr5.3:75926237-75926256 | MS.gene94661:intron | 20.0% |
| !!! | TTTTCTGAATGAATTTTGTT+TGG | - | chr5.3:75924855-75924874 | None:intergenic | 20.0% |
| ! | AAAACATTCATGAGGAAATA+TGG | - | chr5.3:75926352-75926371 | None:intergenic | 25.0% |
| ! | AAAACTATTATGCTGTATGT+TGG | - | chr5.3:75926887-75926906 | None:intergenic | 25.0% |
| ! | AAACTTGTATATGATATGGT+AGG | - | chr5.3:75925009-75925028 | None:intergenic | 25.0% |
| ! | AACAATTATACCATACACTA+TGG | - | chr5.3:75924564-75924583 | None:intergenic | 25.0% |
| ! | AACTTGTATATGATATGGTA+GGG | - | chr5.3:75925008-75925027 | None:intergenic | 25.0% |
| ! | AGCATAAATCAATAATACCT+TGG | - | chr5.3:75924785-75924804 | None:intergenic | 25.0% |
| ! | ATCTATTTGAACTTTCTTGA+AGG | + | chr5.3:75928699-75928718 | MS.gene94661:intron | 25.0% |
| ! | ATTTCTGATATCTAAATTGG+AGG | + | chr5.3:75924912-75924931 | MS.gene94661:intron | 25.0% |
| ! | CAAATACAAACTAAGAACAA+TGG | + | chr5.3:75928529-75928548 | MS.gene94661:intron | 25.0% |
| ! | CAATTCCAATTATAGAATCA+AGG | - | chr5.3:75926729-75926748 | None:intergenic | 25.0% |
| ! | CATCTGAAAAAGAATTTAGA+AGG | + | chr5.3:75926120-75926139 | MS.gene94661:CDS | 25.0% |
| ! | CTTGATTCTATAATTGGAAT+TGG | + | chr5.3:75926727-75926746 | MS.gene94661:CDS | 25.0% |
| ! | CTTTATCTCAGTTTGATATA+TGG | + | chr5.3:75924160-75924179 | MS.gene94661:intron | 25.0% |
| ! | GAAAACTTAAACTCTAAATC+AGG | - | chr5.3:75924476-75924495 | None:intergenic | 25.0% |
| ! | GACTAAATAAAACATTCATG+AGG | - | chr5.3:75926360-75926379 | None:intergenic | 25.0% |
| ! | GATATTTGATTCTTGATCAA+CGG | - | chr5.3:75926525-75926544 | None:intergenic | 25.0% |
| ! | GTAAAATAGTGAAGTGTAAT+TGG | + | chr5.3:75924198-75924217 | MS.gene94661:intron | 25.0% |
| ! | GTAAATATGATGAATATGAC+TGG | - | chr5.3:75925389-75925408 | None:intergenic | 25.0% |
| ! | TAAGGTAACATTACATCATT+AGG | + | chr5.3:75927357-75927376 | MS.gene94661:intron | 25.0% |
| ! | TCACATACATGTATAGTTTA+TGG | + | chr5.3:75926936-75926955 | MS.gene94661:intron | 25.0% |
| ! | TTCTATACAAATAGTTACTC+AGG | + | chr5.3:75927993-75928012 | MS.gene94661:intron | 25.0% |
| !! | ACTAAACAATTTTTGTCATC+AGG | - | chr5.3:75924437-75924456 | None:intergenic | 25.0% |
| !! | ATTCATATTGTCATTTCAGA+TGG | + | chr5.3:75927583-75927602 | MS.gene94661:intron | 25.0% |
| !! | ATTTGTGATAGCAGTTATTT+TGG | + | chr5.3:75926607-75926626 | MS.gene94661:intron | 25.0% |
| !! | CAGCATAATAGTTTTTCTTT+TGG | + | chr5.3:75926892-75926911 | MS.gene94661:intron | 25.0% |
| !! | TAACAATGTTTTACTTCAAC+AGG | + | chr5.3:75925090-75925109 | MS.gene94661:intron | 25.0% |
| !! | TACTAAATTTTCTGATATGG+AGG | + | chr5.3:75925753-75925772 | MS.gene94661:CDS | 25.0% |
| !! | TACTGAAAAATGTGGATTAT+TGG | + | chr5.3:75925635-75925654 | MS.gene94661:intron | 25.0% |
| !! | TATACACTCATATCATCTTT+TGG | - | chr5.3:75928047-75928066 | None:intergenic | 25.0% |
| !! | TCAGAAATCCATTTAATTTC+TGG | - | chr5.3:75926038-75926057 | None:intergenic | 25.0% |
| !!! | CATTGTTCTTAGTTTGTATT+TGG | - | chr5.3:75928531-75928550 | None:intergenic | 25.0% |
| !!! | GGTTGCATTTTTCAATTTTA+AGG | + | chr5.3:75928621-75928640 | MS.gene94661:intron | 25.0% |
| !!! | TTAGCTTTTTAGACAATGTT+GGG | + | chr5.3:75925295-75925314 | MS.gene94661:intron | 25.0% |
| !!! | TTGTGCGTATTTAATTTTAC+AGG | + | chr5.3:75926463-75926482 | MS.gene94661:intron | 25.0% |
| !!! | TTTGTGATAGCAGTTATTTT+GGG | + | chr5.3:75926608-75926627 | MS.gene94661:intron | 25.0% |
| AAACATCATACTATGTATGC+AGG | + | chr5.3:75926658-75926677 | MS.gene94661:intron | 30.0% | |
| AAATTTGATCAAACAGAACC+TGG | + | chr5.3:75927909-75927928 | MS.gene94661:CDS | 30.0% | |
| AAGATATCCGAGAGAATAAT+AGG | - | chr5.3:75925782-75925801 | None:intergenic | 30.0% | |
| AAGGTTCAAGAAATACTAGA+AGG | + | chr5.3:75928718-75928737 | MS.gene94661:intron | 30.0% | |
| AATAACTTTGGACAAACGAT+TGG | - | chr5.3:75925616-75925635 | None:intergenic | 30.0% | |
| ACTATACAATCCATAGTGTA+TGG | + | chr5.3:75924551-75924570 | MS.gene94661:intron | 30.0% | |
| ACTTGGATTCCAACATTTAA+AGG | + | chr5.3:75927723-75927742 | MS.gene94661:intron | 30.0% | |
| AGAAAAAGTAACACATACTC+TGG | - | chr5.3:75924111-75924130 | None:intergenic | 30.0% | |
| AGCAAGCAAATTCAAAAGTA+AGG | - | chr5.3:75928308-75928327 | None:intergenic | 30.0% | |
| ATAACAGACTCAAAAAAAGG+AGG | - | chr5.3:75925858-75925877 | None:intergenic | 30.0% | |
| ATACATGTATGTGAACAAGT+TGG | - | chr5.3:75926930-75926949 | None:intergenic | 30.0% | |
| ATAGATTCTGAACACTTGTT+TGG | - | chr5.3:75926329-75926348 | None:intergenic | 30.0% | |
| ATATATTTATGCTATCCTGC+AGG | + | chr5.3:75924681-75924700 | MS.gene94661:intron | 30.0% | |
| ATGCTCAAGATATTCATTCA+CGG | - | chr5.3:75927872-75927891 | None:intergenic | 30.0% | |
| ATGTTGCACCAGAAATTAAA+TGG | + | chr5.3:75926027-75926046 | MS.gene94661:CDS | 30.0% | |
| ATTATAGAATCAAGGAAACC+TGG | - | chr5.3:75926721-75926740 | None:intergenic | 30.0% | |
| ATTATTCTCTCGGATATCTT+AGG | + | chr5.3:75925782-75925801 | MS.gene94661:CDS | 30.0% | |
| CATATCGAAAAAATGTTGTG+AGG | - | chr5.3:75927429-75927448 | None:intergenic | 30.0% | |
| CGTACTATAAAGATGTTTGT+TGG | + | chr5.3:75925422-75925441 | MS.gene94661:intron | 30.0% | |
| CTTAAGAGAAGATAATGCTA+AGG | + | chr5.3:75924643-75924662 | MS.gene94661:intron | 30.0% | |
| CTTTATCCAATCAGAAAACT+TGG | + | chr5.3:75927706-75927725 | MS.gene94661:intron | 30.0% | |
| GAATTGTGAGTAAAATTCTC+CGG | + | chr5.3:75927232-75927251 | MS.gene94661:intron | 30.0% | |
| GGTATAACAGACTCAAAAAA+AGG | - | chr5.3:75925861-75925880 | None:intergenic | 30.0% | |
| GGTTTCCTTGATTCTATAAT+TGG | + | chr5.3:75926721-75926740 | MS.gene94661:CDS | 30.0% | |
| GTATGGTATAATTGTTTCCA+TGG | + | chr5.3:75924568-75924587 | MS.gene94661:intron | 30.0% | |
| TAACCAACAAGAATACTTTC+CGG | - | chr5.3:75925145-75925164 | None:intergenic | 30.0% | |
| TCAATACCTGCATTTCTAAT+AGG | - | chr5.3:75927670-75927689 | None:intergenic | 30.0% | |
| TGAATATCTTGAGCATCATA+AGG | + | chr5.3:75927876-75927895 | MS.gene94661:CDS | 30.0% | |
| TGATGCATACAAAAACTTGA+AGG | + | chr5.3:75926058-75926077 | MS.gene94661:CDS | 30.0% | |
| ! | AAGTATTCTTGTTGGTTATG+TGG | + | chr5.3:75925147-75925166 | MS.gene94661:CDS | 30.0% |
| ! | AGTATTCTTGTTGGTTATGT+GGG | + | chr5.3:75925148-75925167 | MS.gene94661:CDS | 30.0% |
| ! | CAAAAGTCACTTCATTTTGT+AGG | + | chr5.3:75928585-75928604 | MS.gene94661:intron | 30.0% |
| ! | CAGCATGTTTTCTTAAAAGA+GGG | - | chr5.3:75925041-75925060 | None:intergenic | 30.0% |
| ! | CTCACACAATTTTACTATCA+TGG | - | chr5.3:75925504-75925523 | None:intergenic | 30.0% |
| ! | TCATATCATCTTTTGGCAAT+GGG | - | chr5.3:75928040-75928059 | None:intergenic | 30.0% |
| ! | TGTTTTATAGGTTACTGGAA+GGG | + | chr5.3:75925705-75925724 | MS.gene94661:intron | 30.0% |
| !! | AGGATTCAATTTTGATACAG+AGG | + | chr5.3:75926678-75926697 | MS.gene94661:intron | 30.0% |
| !! | GCGTATTTAATTTTACAGGT+CGG | + | chr5.3:75926467-75926486 | MS.gene94661:intron | 30.0% |
| !! | TACACGGTCCATTTTAAAAA+CGG | - | chr5.3:75928408-75928427 | None:intergenic | 30.0% |
| !! | TTCAATTTTGATACAGAGGA+TGG | + | chr5.3:75926682-75926701 | MS.gene94661:CDS | 30.0% |
| !! | TTGTGATAGCAGTTATTTTG+GGG | + | chr5.3:75926609-75926628 | MS.gene94661:intron | 30.0% |
| !! | TTGTTTTATAGGTTACTGGA+AGG | + | chr5.3:75925704-75925723 | MS.gene94661:intron | 30.0% |
| !!! | GTTAGCTTTTTAGACAATGT+TGG | + | chr5.3:75925294-75925313 | MS.gene94661:intron | 30.0% |
| !!! | TCTCTTTTTGCTGTTTCAAA+AGG | - | chr5.3:75928469-75928488 | None:intergenic | 30.0% |
| !!! | TGAATGTTTTATTTAGTCGC+AGG | + | chr5.3:75926362-75926381 | MS.gene94661:intron | 30.0% |
| !!! | TTTTTAAAATGGACCGTGTA+GGG | + | chr5.3:75928408-75928427 | MS.gene94661:intron | 30.0% |
| AACCAACAAGAATACTTTCC+GGG | - | chr5.3:75925144-75925163 | None:intergenic | 35.0% | |
| AAGAAGAGAAGTAGTTGTGA+AGG | - | chr5.3:75923844-75923863 | None:intergenic | 35.0% | |
| AAGAAGGAAGAGAGAAAGAA+GGG | - | chr5.3:75923872-75923891 | None:intergenic | 35.0% | |
| AAGATACCGTGTAATCCTTT+CGG | - | chr5.3:75928559-75928578 | None:intergenic | 35.0% | |
| AATGAAATGCCTTTGACATG+AGG | + | chr5.3:75925535-75925554 | MS.gene94661:intron | 35.0% | |
| ACTATGACAATTGCACTTGA+GGG | - | chr5.3:75927180-75927199 | None:intergenic | 35.0% | |
| AGAAATACTAGAAGGAGCTA+AGG | + | chr5.3:75928726-75928745 | MS.gene94661:CDS | 35.0% | |
| AGATATTCATTCACGGACTT+TGG | - | chr5.3:75927865-75927884 | None:intergenic | 35.0% | |
| AGTTCAACTGAAGAAGAAGA+TGG | - | chr5.3:75924026-75924045 | None:intergenic | 35.0% | |
| ATATAGGCGTGAAAATATGC+AGG | + | chr5.3:75927945-75927964 | MS.gene94661:CDS | 35.0% | |
| ATGTTTCAGGAAAAACAAGG+GGG | - | chr5.3:75926774-75926793 | None:intergenic | 35.0% | |
| ATTCCTTCTGCTGAAAGTAA+AGG | + | chr5.3:75926551-75926570 | MS.gene94661:CDS | 35.0% | |
| ATTGCTGATAAACTTATCCC+TGG | + | chr5.3:75927123-75927142 | MS.gene94661:CDS | 35.0% | |
| CATACACAAACACAGATCAA+AGG | - | chr5.3:75926990-75927009 | None:intergenic | 35.0% | |
| CATGTTTCAGGAAAAACAAG+GGG | - | chr5.3:75926775-75926794 | None:intergenic | 35.0% | |
| CCATGTTTCAGGAAAAACAA+GGG | - | chr5.3:75926776-75926795 | None:intergenic | 35.0% | |
| CGAACTTTGTAAACTCAACT+AGG | - | chr5.3:75924762-75924781 | None:intergenic | 35.0% | |
| CTAACAATAAGTCTTTGACC+TGG | - | chr5.3:75927267-75927286 | None:intergenic | 35.0% | |
| CTACGATCGAATCAATATTG+AGG | + | chr5.3:75925191-75925210 | MS.gene94661:CDS | 35.0% | |
| CTCAATCAGATTAAACTGAG+TGG | - | chr5.3:75928074-75928093 | None:intergenic | 35.0% | |
| GAAACACATCATTATGCACA+AGG | - | chr5.3:75927465-75927484 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr5.3:75923888-75923907 | None:intergenic | 35.0% | |
| GAAGCTAGAGAACAACATAT+AGG | - | chr5.3:75928186-75928205 | None:intergenic | 35.0% | |
| GAAGTGTGATGAAAAAGTGA+TGG | - | chr5.3:75923978-75923997 | None:intergenic | 35.0% | |
| GAGGATACCTATTATTCTCT+CGG | + | chr5.3:75925772-75925791 | MS.gene94661:CDS | 35.0% | |
| GATGGTGAAATATTAGTACC+AGG | + | chr5.3:75926700-75926719 | MS.gene94661:CDS | 35.0% | |
| GCTTCTCTTTCATTTCTAAC+AGG | + | chr5.3:75927050-75927069 | MS.gene94661:intron | 35.0% | |
| GGGGAGTAAAAATGTTCAAA+AGG | + | chr5.3:75925168-75925187 | MS.gene94661:CDS | 35.0% | |
| GTTGAATGAAAGAAGATGAG+AGG | - | chr5.3:75923956-75923975 | None:intergenic | 35.0% | |
| TAACATCAAGAAAGAACGCA+AGG | - | chr5.3:75925278-75925297 | None:intergenic | 35.0% | |
| TACACTCATAACATTCTTCC+AGG | - | chr5.3:75924389-75924408 | None:intergenic | 35.0% | |
| TACTATGACAATTGCACTTG+AGG | - | chr5.3:75927181-75927200 | None:intergenic | 35.0% | |
| TACTGAAGACATCATCAAAG+AGG | + | chr5.3:75928207-75928226 | MS.gene94661:CDS | 35.0% | |
| TATCATGGACATCGATAATG+TGG | - | chr5.3:75925489-75925508 | None:intergenic | 35.0% | |
| TCAAAAACAAGAATACGACG+AGG | + | chr5.3:75928258-75928277 | MS.gene94661:CDS | 35.0% | |
| TCCATGTTTCAGGAAAAACA+AGG | - | chr5.3:75926777-75926796 | None:intergenic | 35.0% | |
| TCTACCTTGTTCATCAAACA+AGG | - | chr5.3:75927630-75927649 | None:intergenic | 35.0% | |
| TCTATAATTGGAATTGGTCG+AGG | + | chr5.3:75926733-75926752 | MS.gene94661:CDS | 35.0% | |
| TCTCTTCCATGCAAAATTTG+AGG | + | chr5.3:75924952-75924971 | MS.gene94661:intron | 35.0% | |
| TGCTTCCGTTAAAGTTCAAT+GGG | - | chr5.3:75927021-75927040 | None:intergenic | 35.0% | |
| TGTTCATCAAACAAGGATTG+AGG | - | chr5.3:75927623-75927642 | None:intergenic | 35.0% | |
| TTGACGTTTGAATTCAGCAA+TGG | - | chr5.3:75928242-75928261 | None:intergenic | 35.0% | |
| TTGCTTCCGTTAAAGTTCAA+TGG | - | chr5.3:75927022-75927041 | None:intergenic | 35.0% | |
| TTGTGAGGTACATTCTAATC+TGG | - | chr5.3:75927414-75927433 | None:intergenic | 35.0% | |
| TTTGTAGGCAATGGTAGTTT+AGG | + | chr5.3:75928600-75928619 | MS.gene94661:intron | 35.0% | |
| ! | CAATCCTTGTTTGATGAACA+AGG | + | chr5.3:75927623-75927642 | MS.gene94661:CDS | 35.0% |
| ! | CAGTAACCTCAAATTTTGCA+TGG | - | chr5.3:75924961-75924980 | None:intergenic | 35.0% |
| ! | CTCATATCATCTTTTGGCAA+TGG | - | chr5.3:75928041-75928060 | None:intergenic | 35.0% |
| ! | GCAGCATGTTTTCTTAAAAG+AGG | - | chr5.3:75925042-75925061 | None:intergenic | 35.0% |
| ! | GTATTCTTGTTGGTTATGTG+GGG | + | chr5.3:75925149-75925168 | MS.gene94661:CDS | 35.0% |
| ! | TCACTTCATTTTGTAGGCAA+TGG | + | chr5.3:75928591-75928610 | MS.gene94661:intron | 35.0% |
| ! | TGGAATCCAAGTTTTCTGAT+TGG | - | chr5.3:75927715-75927734 | None:intergenic | 35.0% |
| !! | AGTAACACATACTCTGGAAT+TGG | - | chr5.3:75924105-75924124 | None:intergenic | 35.0% |
| !! | ATGCAGGTATTGATTCAAGT+AGG | + | chr5.3:75927677-75927696 | MS.gene94661:intron | 35.0% |
| !! | TCATGTCAAAGGCATTTCAT+TGG | - | chr5.3:75925536-75925555 | None:intergenic | 35.0% |
| !! | TCTTTGATGATGTCTTCAGT+AGG | - | chr5.3:75928208-75928227 | None:intergenic | 35.0% |
| !!! | CTCGCTTATTTCACTTTTTC+AGG | + | chr5.3:75925988-75926007 | MS.gene94661:intron | 35.0% |
| !!! | GTTTTTAAAATGGACCGTGT+AGG | + | chr5.3:75928407-75928426 | MS.gene94661:intron | 35.0% |
| AAAACTAACTGAAGAGCAGC+TGG | + | chr5.3:75927825-75927844 | MS.gene94661:CDS | 40.0% | |
| AACAGCGGTATGTTGTAATC+TGG | + | chr5.3:75925234-75925253 | MS.gene94661:intron | 40.0% | |
| AAGAACAATGGCTATCCGAA+AGG | + | chr5.3:75928541-75928560 | MS.gene94661:intron | 40.0% | |
| AAGAGATAGAGCAAACAGCT+AGG | + | chr5.3:75927296-75927315 | MS.gene94661:CDS | 40.0% | |
| AATTGGACCTGAAATTTCGC+CGG | + | chr5.3:75924215-75924234 | MS.gene94661:intron | 40.0% | |
| ACAAGTGTCAGTTAGTTGAC+TGG | - | chr5.3:75926217-75926236 | None:intergenic | 40.0% | |
| ACGAGCCCATTGAACTTTAA+CGG | + | chr5.3:75927013-75927032 | MS.gene94661:intron | 40.0% | |
| AGAGATAGAGCAAACAGCTA+GGG | + | chr5.3:75927297-75927316 | MS.gene94661:CDS | 40.0% | |
| ATCCAGCCTATTAGAAATGC+AGG | + | chr5.3:75927661-75927680 | MS.gene94661:CDS | 40.0% | |
| ATCTGCAGTGTAGAAGTCAT+CGG | - | chr5.3:75925949-75925968 | None:intergenic | 40.0% | |
| ATTGAAGGTCACTGAGACAA+AGG | + | chr5.3:75924076-75924095 | MS.gene94661:CDS | 40.0% | |
| CATGAGTGATTCCTTGATCA+TGG | + | chr5.3:75925345-75925364 | MS.gene94661:intron | 40.0% | |
| CATGATCAAGGAATCACTCA+TGG | - | chr5.3:75925347-75925366 | None:intergenic | 40.0% | |
| CGATCGAATCAATATTGAGG+AGG | + | chr5.3:75925194-75925213 | MS.gene94661:CDS | 40.0% | |
| CTACCTTTACTTTCAGCAGA+AGG | - | chr5.3:75926557-75926576 | None:intergenic | 40.0% | |
| CTGAAAGTTGTTACTGACAG+AGG | + | chr5.3:75926164-75926183 | MS.gene94661:CDS | 40.0% | |
| CTGTTTACTAGCCATGATCA+AGG | - | chr5.3:75925359-75925378 | None:intergenic | 40.0% | |
| CTTCTGCTGAAAGTAAAGGT+AGG | + | chr5.3:75926555-75926574 | MS.gene94661:intron | 40.0% | |
| GAAAGAAGATGAGAGGTTGA+AGG | - | chr5.3:75923949-75923968 | None:intergenic | 40.0% | |
| GAACAAGGTAGACAGCTATA+TGG | + | chr5.3:75927638-75927657 | MS.gene94661:CDS | 40.0% | |
| GAAGAAGGAAGAGAGAAAGA+AGG | - | chr5.3:75923873-75923892 | None:intergenic | 40.0% | |
| GAGGTTGAAGGAGTTGAATT+TGG | - | chr5.3:75923937-75923956 | None:intergenic | 40.0% | |
| GTAACAAGTCCTCATGTCAA+AGG | - | chr5.3:75925547-75925566 | None:intergenic | 40.0% | |
| TAAACTGAGCATGAACACCT+TGG | - | chr5.3:75926813-75926832 | None:intergenic | 40.0% | |
| TACCTGCATTTCTAATAGGC+TGG | - | chr5.3:75927666-75927685 | None:intergenic | 40.0% | |
| TAGCTGTTTGCTCTATCTCT+TGG | - | chr5.3:75927297-75927316 | None:intergenic | 40.0% | |
| TAGGTGATGTGCTTGCAAAA+TGG | + | chr5.3:75926574-75926593 | MS.gene94661:intron | 40.0% | |
| TATATATGTCACCAACTGCC+AGG | - | chr5.3:75927930-75927949 | None:intergenic | 40.0% | |
| TGAGTTTACAAAGTTCGCCA+AGG | + | chr5.3:75924765-75924784 | MS.gene94661:CDS | 40.0% | |
| TGGACATCGATAATGTGGAA+TGG | - | chr5.3:75925484-75925503 | None:intergenic | 40.0% | |
| TGGATTTCGTCCTGGAAAAA+AGG | + | chr5.3:75925117-75925136 | MS.gene94661:CDS | 40.0% | |
| TTACAGAGATTTACCAGAGC+TGG | + | chr5.3:75927092-75927111 | MS.gene94661:CDS | 40.0% | |
| TTGTGTTAGTGCAATGTGCA+TGG | - | chr5.3:75925449-75925468 | None:intergenic | 40.0% | |
| TTTGACCTGGAAATTCATGC+CGG | - | chr5.3:75927254-75927273 | None:intergenic | 40.0% | |
| ! | GTTTTACTTCAACAGGTACC+TGG | + | chr5.3:75925097-75925116 | MS.gene94661:intron | 40.0% |
| ! | TTGTTTCCATGGAAGAGTGT+AGG | + | chr5.3:75924579-75924598 | MS.gene94661:intron | 40.0% |
| ! | TTTTCCTGAAACATGGAAGC+AGG | + | chr5.3:75926780-75926799 | MS.gene94661:CDS | 40.0% |
| ! | TTTTCCTGCTTCCATGTTTC+AGG | - | chr5.3:75926787-75926806 | None:intergenic | 40.0% |
| !! | AGGAAGTGTTTATCCCTACA+CGG | - | chr5.3:75928424-75928443 | None:intergenic | 40.0% |
| !! | TGGCAGTTGGTGACATATAT+AGG | + | chr5.3:75927929-75927948 | MS.gene94661:CDS | 40.0% |
| !!! | CCCTTGTTTTTCCTGAAACA+TGG | + | chr5.3:75926773-75926792 | MS.gene94661:CDS | 40.0% |
| !!! | TTTTTTCCAGGACGAAATCC+AGG | - | chr5.3:75925118-75925137 | None:intergenic | 40.0% |
| AAAAGTCACCTGTTGCACTG+TGG | - | chr5.3:75927154-75927173 | None:intergenic | 45.0% | |
| ACATCTAGTGTAGCTAGTCC+TGG | + | chr5.3:75924368-75924387 | MS.gene94661:intron | 45.0% | |
| ACTTTCACACGCTGTAACAG+CGG | + | chr5.3:75925219-75925238 | MS.gene94661:CDS | 45.0% | |
| ATACGACGAGGAACGTGTAA+AGG | + | chr5.3:75928270-75928289 | MS.gene94661:CDS | 45.0% | |
| ATCAAACAGAACCTGGCAGT+TGG | + | chr5.3:75927916-75927935 | MS.gene94661:CDS | 45.0% | |
| ATGCGAGGACTGTTACGAAA+GGG | + | chr5.3:75924735-75924754 | MS.gene94661:CDS | 45.0% | |
| ATTCTCCGGCATGAATTTCC+AGG | + | chr5.3:75927246-75927265 | MS.gene94661:intron | 45.0% | |
| CCTTCAATTCAGCAGGAAGA+CGG | - | chr5.3:75924064-75924083 | None:intergenic | 45.0% | |
| CGTTATAAAACGACTCGCAG+AGG | - | chr5.3:75926293-75926312 | None:intergenic | 45.0% | |
| GCAATAGAATCATCCAGCTC+TGG | - | chr5.3:75927108-75927127 | None:intergenic | 45.0% | |
| GCATGGAAGAGAATGTAGAG+TGG | - | chr5.3:75924944-75924963 | None:intergenic | 45.0% | |
| GGCTATCCGAAAGGATTACA+CGG | + | chr5.3:75928550-75928569 | MS.gene94661:intron | 45.0% | |
| TATGCGAGGACTGTTACGAA+AGG | + | chr5.3:75924734-75924753 | MS.gene94661:CDS | 45.0% | |
| TCAGTGACCTTCAATTCAGC+AGG | - | chr5.3:75924071-75924090 | None:intergenic | 45.0% | |
| TGGAAGCAGGAAAATCTCCA+AGG | + | chr5.3:75926793-75926812 | MS.gene94661:CDS | 45.0% | |
| TGTTACTGACAGAGGACTAC+AGG | + | chr5.3:75926172-75926191 | MS.gene94661:CDS | 45.0% | |
| ! | AAGGAGCTAAGGTGCTAGAA+TGG | + | chr5.3:75928737-75928756 | MS.gene94661:CDS | 45.0% |
| !! | CAGGAAGACGGTCATTTTCT+GGG | - | chr5.3:75924052-75924071 | None:intergenic | 45.0% |
| !! | GTCCCGGAAAGTATTCTTGT+TGG | + | chr5.3:75925139-75925158 | MS.gene94661:CDS | 45.0% |
| !! | AATTATAAAATACATATAAA+AGG | - | chr5.3:75926422-75926441 | None:intergenic | 5.0% |
| ATTTCGCCGGCGCAATAGTA+TGG | + | chr5.3:75924228-75924247 | MS.gene94661:intron | 50.0% | |
| CCACATGCAATCTAACCTGC+AGG | - | chr5.3:75924699-75924718 | None:intergenic | 50.0% | |
| CCGTCTTCCTGCTGAATTGA+AGG | + | chr5.3:75924061-75924080 | MS.gene94661:CDS | 50.0% | |
| CCTGCAGGTTAGATTGCATG+TGG | + | chr5.3:75924696-75924715 | MS.gene94661:intron | 50.0% | |
| CGAGGAACGTGTAAAGGAAC+AGG | + | chr5.3:75928276-75928295 | MS.gene94661:CDS | 50.0% | |
| CTGTTTGATTGCTGCTGCCA+TGG | + | chr5.3:75923803-75923822 | MS.gene94661:intron | 50.0% | |
| CTTGCACCTACACTCTTCCA+TGG | - | chr5.3:75924588-75924607 | None:intergenic | 50.0% | |
| GCAGGTTAGATTGCATGTGG+AGG | + | chr5.3:75924699-75924718 | MS.gene94661:intron | 50.0% | |
| GGAGAAGCTGAGACAGTGAA+GGG | - | chr5.3:75924005-75924024 | None:intergenic | 50.0% | |
| GTCTTCCCATACTATTGCGC+CGG | - | chr5.3:75924237-75924256 | None:intergenic | 50.0% | |
| GTTGCACTGTGGTACATCCA+GGG | - | chr5.3:75927143-75927162 | None:intergenic | 50.0% | |
| TCGTCCTGGAAAAAAGGTCC+CGG | + | chr5.3:75925123-75925142 | MS.gene94661:CDS | 50.0% | |
| TGGAGAAGCTGAGACAGTGA+AGG | - | chr5.3:75924006-75924025 | None:intergenic | 50.0% | |
| TGGATGTACCACAGTGCAAC+AGG | + | chr5.3:75927143-75927162 | MS.gene94661:CDS | 50.0% | |
| TGTTGCACTGTGGTACATCC+AGG | - | chr5.3:75927144-75927163 | None:intergenic | 50.0% | |
| TTTCGCCGGCGCAATAGTAT+GGG | + | chr5.3:75924229-75924248 | MS.gene94661:intron | 50.0% | |
| ! | TATTGCGCCGGCGAAATTTC+AGG | - | chr5.3:75924225-75924244 | None:intergenic | 50.0% |
| !! | AGAAGGCGTTACAAGTCAGC+TGG | + | chr5.3:75926137-75926156 | MS.gene94661:CDS | 50.0% |
| !! | GCAGGAAGACGGTCATTTTC+TGG | - | chr5.3:75924053-75924072 | None:intergenic | 50.0% |
| !!! | CTTTCCGGGACCTTTTTTCC+AGG | - | chr5.3:75925130-75925149 | None:intergenic | 50.0% |
| CAGGTACCTGGATTTCGTCC+TGG | + | chr5.3:75925109-75925128 | MS.gene94661:intron | 55.0% | |
| CAGTCCTCGCATACCAGTGA+TGG | - | chr5.3:75924727-75924746 | None:intergenic | 55.0% | |
| GGTACCATCACTGGTATGCG+AGG | + | chr5.3:75924720-75924739 | MS.gene94661:CDS | 55.0% | |
| GGTTACTGGAAGGGCTTTGC+AGG | + | chr5.3:75925714-75925733 | MS.gene94661:intron | 55.0% | |
| GGTTCGAGTACAGAGCTCCA+TGG | - | chr5.3:75923823-75923842 | None:intergenic | 55.0% | |
| !! | GCATGTGGAGGTACCATCAC+TGG | + | chr5.3:75924711-75924730 | MS.gene94661:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 75923789 | 75928798 | 75923789 | ID=MS.gene94661 |
| chr5.3 | mRNA | 75923789 | 75928798 | 75923789 | ID=MS.gene94661.t1;Parent=MS.gene94661 |
| chr5.3 | exon | 75923789 | 75923792 | 75923789 | ID=MS.gene94661.t1.exon1;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75923789 | 75923792 | 75923789 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75924054 | 75924112 | 75924054 | ID=MS.gene94661.t1.exon2;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75924054 | 75924112 | 75924054 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75924703 | 75924786 | 75924703 | ID=MS.gene94661.t1.exon3;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75924703 | 75924786 | 75924703 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75925112 | 75925240 | 75925112 | ID=MS.gene94661.t1.exon4;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75925112 | 75925240 | 75925112 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75925715 | 75925803 | 75925715 | ID=MS.gene94661.t1.exon5;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75925715 | 75925803 | 75925715 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75926010 | 75926193 | 75926010 | ID=MS.gene94661.t1.exon6;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75926010 | 75926193 | 75926010 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75926485 | 75926572 | 75926485 | ID=MS.gene94661.t1.exon7;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75926485 | 75926572 | 75926485 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75926680 | 75926834 | 75926680 | ID=MS.gene94661.t1.exon8;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75926680 | 75926834 | 75926680 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75927072 | 75927164 | 75927072 | ID=MS.gene94661.t1.exon9;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75927072 | 75927164 | 75927072 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75927268 | 75927360 | 75927268 | ID=MS.gene94661.t1.exon10;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75927268 | 75927360 | 75927268 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75927602 | 75927682 | 75927602 | ID=MS.gene94661.t1.exon11;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75927602 | 75927682 | 75927602 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75927817 | 75927966 | 75927817 | ID=MS.gene94661.t1.exon12;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75927817 | 75927966 | 75927817 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75928202 | 75928297 | 75928202 | ID=MS.gene94661.t1.exon13;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75928202 | 75928297 | 75928202 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| chr5.3 | exon | 75928721 | 75928798 | 75928721 | ID=MS.gene94661.t1.exon14;Parent=MS.gene94661.t1 |
| chr5.3 | CDS | 75928721 | 75928798 | 75928721 | ID=cds.MS.gene94661.t1;Parent=MS.gene94661.t1 |
| Gene Sequence |
| Protein sequence |
