Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032554.01.T01 | KAB2614428.1 | 74.51 | 51 | 13 | 0 | 3 | 53 | 114 | 164 | 1.64E-16 | 80.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032554.01.T01 | Q9SX68 | 76.316 | 38 | 9 | 0 | 3 | 40 | 122 | 159 | 3.00E-14 | 66.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032554.01.T01 | A0A5N5GGI0 | 74.510 | 51 | 13 | 0 | 3 | 53 | 114 | 164 | 7.85e-17 | 80.1 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048727.01 | MsG0680032554.01 | 0.806453 | 8.167212e-50 | 4.434734e-47 |
MsG0080048780.01 | MsG0680032554.01 | 0.840440 | 8.684421e-58 | 1.237102e-54 |
MsG0080048876.01 | MsG0680032554.01 | 0.838883 | 2.207297e-57 | 2.996781e-54 |
MsG0080049039.01 | MsG0680032554.01 | 0.834609 | 2.715378e-56 | 3.238918e-53 |
MsG0080049040.01 | MsG0680032554.01 | 0.827895 | 1.215196e-54 | 1.188860e-51 |
MsG0080049063.01 | MsG0680032554.01 | 0.812228 | 4.712000e-51 | 2.979201e-48 |
MsG0080049068.01 | MsG0680032554.01 | 0.828347 | 9.454207e-55 | 9.372049e-52 |
MsG0080049078.01 | MsG0680032554.01 | 0.800626 | 1.319678e-48 | 6.174114e-46 |
MsG0180000670.01 | MsG0680032554.01 | 0.828870 | 7.068116e-55 | 7.113439e-52 |
MsG0180000671.01 | MsG0680032554.01 | 0.851864 | 6.722091e-61 | 1.378994e-57 |
MsG0180000677.01 | MsG0680032554.01 | 0.810203 | 1.295414e-50 | 7.760189e-48 |
MsG0180000678.01 | MsG0680032554.01 | 0.829475 | 5.041114e-55 | 5.164925e-52 |
MsG0180000878.01 | MsG0680032554.01 | 0.871052 | 9.168051e-67 | 3.646577e-63 |
MsG0180001085.01 | MsG0680032554.01 | 0.828632 | 8.072048e-55 | 8.068535e-52 |
MsG0180001175.01 | MsG0680032554.01 | 0.861149 | 1.256663e-63 | 3.520434e-60 |
MsG0180001270.01 | MsG0680032554.01 | 0.831080 | 2.044223e-55 | 2.194928e-52 |
MsG0180001371.01 | MsG0680032554.01 | 0.807764 | 4.309827e-50 | 2.420931e-47 |
MsG0180003527.01 | MsG0680032554.01 | 0.805941 | 1.046901e-49 | 5.610847e-47 |
MsG0180003531.01 | MsG0680032554.01 | 0.818044 | 2.406418e-52 | 1.781769e-49 |
MsG0180004051.01 | MsG0680032554.01 | 0.802975 | 4.346333e-49 | 2.158269e-46 |
MsG0180004163.01 | MsG0680032554.01 | 0.801460 | 8.911842e-49 | 4.258285e-46 |
MsG0180004192.01 | MsG0680032554.01 | 0.826420 | 2.739668e-54 | 2.568082e-51 |
MsG0180004542.01 | MsG0680032554.01 | 0.815381 | 9.520040e-52 | 6.553298e-49 |
MsG0180004733.01 | MsG0680032554.01 | 0.843958 | 1.017453e-58 | 1.618123e-55 |
MsG0180004735.01 | MsG0680032554.01 | 0.836137 | 1.116373e-56 | 1.394210e-53 |
MsG0180004739.01 | MsG0680032554.01 | 0.814070 | 1.857435e-51 | 1.233982e-48 |
MsG0180005039.01 | MsG0680032554.01 | 0.809408 | 1.920552e-50 | 1.126758e-47 |
MsG0180005349.01 | MsG0680032554.01 | 0.804942 | 1.695701e-49 | 8.858081e-47 |
MsG0180005492.01 | MsG0680032554.01 | 0.825868 | 3.707680e-54 | 3.421353e-51 |
MsG0180005750.01 | MsG0680032554.01 | 0.838634 | 2.559192e-57 | 3.448513e-54 |
MsG0180005755.01 | MsG0680032554.01 | 0.845516 | 3.867675e-59 | 6.461435e-56 |
MsG0180005807.01 | MsG0680032554.01 | 0.822793 | 1.958436e-53 | 1.655863e-50 |
MsG0180005961.01 | MsG0680032554.01 | 0.822370 | 2.456743e-53 | 2.052478e-50 |
MsG0180006030.01 | MsG0680032554.01 | 0.823947 | 1.052585e-53 | 9.194987e-51 |
MsG0280010569.01 | MsG0680032554.01 | 0.806714 | 7.192682e-50 | 3.931658e-47 |
MsG0280010926.01 | MsG0680032554.01 | 0.810120 | 1.349594e-50 | 8.067805e-48 |
MsG0280010975.01 | MsG0680032554.01 | 0.802031 | 6.804581e-49 | 3.298777e-46 |
MsG0280011252.01 | MsG0680032554.01 | 0.812172 | 4.846012e-51 | 3.059169e-48 |
MsG0280011411.01 | MsG0680032554.01 | 0.828642 | 8.026282e-55 | 8.025201e-52 |
MsG0380012876.01 | MsG0680032554.01 | 0.815752 | 7.869065e-52 | 5.472575e-49 |
MsG0380013472.01 | MsG0680032554.01 | 0.803683 | 3.100683e-49 | 1.567979e-46 |
MsG0380013970.01 | MsG0680032554.01 | 0.802721 | 4.905093e-49 | 2.420216e-46 |
MsG0380014007.01 | MsG0680032554.01 | 0.805976 | 1.028931e-49 | 5.519554e-47 |
MsG0380014909.01 | MsG0680032554.01 | 0.803749 | 3.004843e-49 | 1.522134e-46 |
MsG0680030858.01 | MsG0680032554.01 | 0.806818 | 6.839515e-50 | 3.748725e-47 |
MsG0680030957.01 | MsG0680032554.01 | 0.850701 | 1.432571e-60 | 2.830327e-57 |
MsG0680031010.01 | MsG0680032554.01 | 0.803701 | 3.074675e-49 | 1.555540e-46 |
MsG0680031689.01 | MsG0680032554.01 | 0.819876 | 9.227272e-53 | 7.188033e-50 |
MsG0680032238.01 | MsG0680032554.01 | 0.850759 | 1.379356e-60 | 2.730546e-57 |
MsG0680032515.01 | MsG0680032554.01 | 0.823180 | 1.591474e-53 | 1.360356e-50 |
MsG0680032554.01 | MsG0680033377.01 | 0.826255 | 2.998409e-54 | 2.797393e-51 |
MsG0680032554.01 | MsG0680034064.01 | 0.835460 | 1.656503e-56 | 2.027000e-53 |
MsG0680032554.01 | MsG0680035731.01 | 0.839220 | 1.804494e-57 | 2.475501e-54 |
MsG0680032554.01 | MsG0680035791.01 | 0.851526 | 8.378195e-61 | 1.700622e-57 |
MsG0680032554.01 | MsG0780036443.01 | 0.836332 | 9.956956e-57 | 1.250945e-53 |
MsG0680032554.01 | MsG0780037184.01 | 0.830419 | 2.968230e-55 | 3.125479e-52 |
MsG0680032554.01 | MsG0780037638.01 | 0.807945 | 3.944187e-50 | 2.226060e-47 |
MsG0680032554.01 | MsG0780038351.01 | 0.825843 | 3.758455e-54 | 3.465775e-51 |
MsG0680032554.01 | MsG0780038616.01 | 0.831517 | 1.595794e-55 | 1.735852e-52 |
MsG0680032554.01 | MsG0780038784.01 | 0.846423 | 2.193205e-59 | 3.773225e-56 |
MsG0680032554.01 | MsG0780038807.01 | 0.827777 | 1.297213e-54 | 1.264670e-51 |
MsG0680032554.01 | MsG0780039186.01 | 0.806922 | 6.500546e-50 | 3.572465e-47 |
MsG0680032554.01 | MsG0780039675.01 | 0.861896 | 7.433184e-64 | 2.135720e-60 |
MsG0680032554.01 | MsG0780039746.01 | 0.881592 | 2.111226e-70 | 1.244349e-66 |
MsG0680032554.01 | MsG0780039853.01 | 0.827141 | 1.843368e-54 | 1.764191e-51 |
MsG0680032554.01 | MsG0780039975.01 | 0.821381 | 4.160747e-53 | 3.379596e-50 |
MsG0680032554.01 | MsG0780040284.01 | 0.844337 | 8.049088e-59 | 1.295318e-55 |
MsG0680032554.01 | MsG0780040331.01 | 0.849867 | 2.454686e-60 | 4.719131e-57 |
MsG0680032554.01 | MsG0780040567.01 | 0.813037 | 3.134655e-51 | 2.024867e-48 |
MsG0680032554.01 | MsG0780041138.01 | 0.809215 | 2.112863e-50 | 1.233192e-47 |
MsG0680032554.01 | MsG0780041480.01 | 0.806837 | 6.774819e-50 | 3.715147e-47 |
MsG0680032554.01 | MsG0880042475.01 | 0.833991 | 3.879962e-56 | 4.543248e-53 |
MsG0680032554.01 | MsG0880042555.01 | 0.815174 | 1.058021e-51 | 7.241407e-49 |
MsG0680032554.01 | MsG0880042890.01 | 0.841285 | 5.211965e-58 | 7.621193e-55 |
MsG0680032554.01 | MsG0880043249.01 | 0.803234 | 3.842598e-49 | 1.920844e-46 |
MsG0680032554.01 | MsG0880043814.01 | 0.821778 | 3.369845e-53 | 2.768024e-50 |
MsG0680032554.01 | MsG0880044228.01 | 0.835374 | 1.741946e-56 | 2.126119e-53 |
MsG0680032554.01 | MsG0880044392.01 | 0.850312 | 1.841949e-60 | 3.593300e-57 |
MsG0680032554.01 | MsG0880044414.01 | 0.850929 | 1.235758e-60 | 2.460079e-57 |
MsG0680032554.01 | MsG0880044487.01 | 0.805697 | 1.177672e-49 | 6.272611e-47 |
MsG0680032554.01 | MsG0880045101.01 | 0.835316 | 1.801003e-56 | 2.194588e-53 |
MsG0680032554.01 | MsG0880046054.01 | 0.822409 | 2.406407e-53 | 2.012592e-50 |
MsG0680032554.01 | MsG0880046267.01 | 0.821821 | 3.292450e-53 | 2.707850e-50 |
MsG0680032554.01 | MsG0880046764.01 | 0.801359 | 9.347570e-49 | 4.455208e-46 |
MsG0680032554.01 | MsG0880046765.01 | 0.828925 | 6.853693e-55 | 6.909158e-52 |
MsG0680032554.01 | MsG0880046791.01 | 0.844487 | 7.333251e-59 | 1.185776e-55 |
MsG0680032554.01 | MsG0880047234.01 | 0.807883 | 4.065677e-50 | 2.290846e-47 |
MsG0680032554.01 | MsG0880047567.01 | 0.809738 | 1.631546e-50 | 9.656175e-48 |
MsG0680032554.01 | MsG0880047587.01 | 0.814088 | 1.841234e-51 | 1.223748e-48 |
MsG0480018592.01 | MsG0680032554.01 | 0.800195 | 1.615304e-48 | 7.474796e-46 |
MsG0480018644.01 | MsG0680032554.01 | 0.814504 | 1.489496e-51 | 1.001299e-48 |
MsG0480019751.01 | MsG0680032554.01 | 0.853308 | 2.603290e-61 | 5.600135e-58 |
MsG0480019956.01 | MsG0680032554.01 | 0.847224 | 1.324149e-59 | 2.337440e-56 |
MsG0480019971.01 | MsG0680032554.01 | 0.830209 | 3.341459e-55 | 3.497366e-52 |
MsG0480020408.01 | MsG0680032554.01 | 0.877023 | 8.762171e-69 | 4.339483e-65 |
MsG0480020690.01 | MsG0680032554.01 | 0.842253 | 2.894145e-58 | 4.362735e-55 |
MsG0480020753.01 | MsG0680032554.01 | 0.859942 | 2.916943e-63 | 7.838884e-60 |
MsG0480020783.01 | MsG0680032554.01 | 0.803386 | 3.573517e-49 | 1.793332e-46 |
MsG0480021168.01 | MsG0680032554.01 | 0.804446 | 2.152133e-49 | 1.109853e-46 |
MsG0480021303.01 | MsG0680032554.01 | 0.804769 | 1.842925e-49 | 9.583963e-47 |
MsG0480021337.01 | MsG0680032554.01 | 0.826019 | 3.412170e-54 | 3.162154e-51 |
MsG0480021521.01 | MsG0680032554.01 | 0.810538 | 1.096544e-50 | 6.627334e-48 |
MsG0480021682.01 | MsG0680032554.01 | 0.847809 | 9.144327e-60 | 1.644633e-56 |
MsG0480021754.01 | MsG0680032554.01 | 0.803359 | 3.620072e-49 | 1.815383e-46 |
MsG0480021783.01 | MsG0680032554.01 | 0.809057 | 2.283518e-50 | 1.327144e-47 |
MsG0480021803.01 | MsG0680032554.01 | 0.840380 | 9.003489e-58 | 1.280230e-54 |
MsG0480022149.01 | MsG0680032554.01 | 0.803006 | 4.283034e-49 | 2.128491e-46 |
MsG0480022260.01 | MsG0680032554.01 | 0.813107 | 3.026316e-51 | 1.958424e-48 |
MsG0480022294.01 | MsG0680032554.01 | 0.809030 | 2.314226e-50 | 1.343998e-47 |
MsG0480022646.01 | MsG0680032554.01 | 0.812474 | 4.164307e-51 | 2.650372e-48 |
MsG0480022647.01 | MsG0680032554.01 | 0.813285 | 2.766012e-51 | 1.798750e-48 |
MsG0480023098.01 | MsG0680032554.01 | 0.824076 | 9.819508e-54 | 8.608453e-51 |
MsG0480023216.01 | MsG0680032554.01 | 0.838835 | 2.270747e-57 | 3.078419e-54 |
MsG0480023314.01 | MsG0680032554.01 | 0.871562 | 6.219604e-67 | 2.520165e-63 |
MsG0480023367.01 | MsG0680032554.01 | 0.800738 | 1.251582e-48 | 5.872306e-46 |
MsG0480023389.01 | MsG0680032554.01 | 0.831077 | 2.048008e-55 | 2.198795e-52 |
MsG0480023422.01 | MsG0680032554.01 | 0.805270 | 1.447901e-49 | 7.626943e-47 |
MsG0480023569.01 | MsG0680032554.01 | 0.809160 | 2.171017e-50 | 1.265268e-47 |
MsG0480023590.01 | MsG0680032554.01 | 0.812625 | 3.858707e-51 | 2.465549e-48 |
MsG0480023650.01 | MsG0680032554.01 | 0.806871 | 6.664716e-50 | 3.657885e-47 |
MsG0480023656.01 | MsG0680032554.01 | 0.801389 | 9.216093e-49 | 4.395734e-46 |
MsG0480023661.01 | MsG0680032554.01 | 0.837970 | 3.794886e-57 | 5.011243e-54 |
MsG0480023845.01 | MsG0680032554.01 | 0.803815 | 2.911169e-49 | 1.477207e-46 |
MsG0480023990.01 | MsG0680032554.01 | 0.812869 | 3.412237e-51 | 2.194192e-48 |
MsG0480023991.01 | MsG0680032554.01 | 0.816858 | 4.452176e-52 | 3.191232e-49 |
MsG0480023992.01 | MsG0680032554.01 | 0.801214 | 1.000834e-48 | 4.752711e-46 |
MsG0580024679.01 | MsG0680032554.01 | 0.845158 | 4.836433e-59 | 7.987067e-56 |
MsG0580024759.01 | MsG0680032554.01 | 0.813824 | 2.104428e-51 | 1.388738e-48 |
MsG0580024873.01 | MsG0680032554.01 | 0.803284 | 3.750803e-49 | 1.877386e-46 |
MsG0580024950.01 | MsG0680032554.01 | 0.813606 | 2.351251e-51 | 1.542496e-48 |
MsG0580025054.01 | MsG0680032554.01 | 0.809396 | 1.931510e-50 | 1.132826e-47 |
MsG0580025366.01 | MsG0680032554.01 | 0.810015 | 1.422095e-50 | 8.478246e-48 |
MsG0580025411.01 | MsG0680032554.01 | 0.807991 | 3.857062e-50 | 2.179550e-47 |
MsG0580025668.01 | MsG0680032554.01 | 0.807375 | 5.211877e-50 | 2.898188e-47 |
MsG0580025828.01 | MsG0680032554.01 | 0.812607 | 3.894271e-51 | 2.487057e-48 |
MsG0580025845.01 | MsG0680032554.01 | 0.804444 | 2.153851e-49 | 1.110671e-46 |
MsG0380014940.01 | MsG0680032554.01 | 0.823283 | 1.505564e-53 | 1.290660e-50 |
MsG0380015603.01 | MsG0680032554.01 | 0.843296 | 1.528855e-58 | 2.381509e-55 |
MsG0380015693.01 | MsG0680032554.01 | 0.830235 | 3.292334e-55 | 3.448614e-52 |
MsG0380015743.01 | MsG0680032554.01 | 0.801331 | 9.469710e-49 | 4.510213e-46 |
MsG0380015896.01 | MsG0680032554.01 | 0.803882 | 2.819258e-49 | 1.433070e-46 |
MsG0380016137.01 | MsG0680032554.01 | 0.806673 | 7.338509e-50 | 4.006978e-47 |
MsG0380016192.01 | MsG0680032554.01 | 0.805695 | 1.179054e-49 | 6.279557e-47 |
MsG0380016194.01 | MsG0680032554.01 | 0.801443 | 8.980853e-49 | 4.289519e-46 |
MsG0380016284.01 | MsG0680032554.01 | 0.812475 | 4.162309e-51 | 2.649174e-48 |
MsG0380016294.01 | MsG0680032554.01 | 0.805206 | 1.493206e-49 | 7.852840e-47 |
MsG0380016544.01 | MsG0680032554.01 | 0.805264 | 1.451501e-49 | 7.644721e-47 |
MsG0380016730.01 | MsG0680032554.01 | 0.806343 | 8.614296e-50 | 4.664171e-47 |
MsG0380016836.01 | MsG0680032554.01 | 0.829634 | 4.612079e-55 | 4.747462e-52 |
MsG0380016957.01 | MsG0680032554.01 | 0.826668 | 2.390839e-54 | 2.256943e-51 |
MsG0380017017.01 | MsG0680032554.01 | 0.806338 | 8.634351e-50 | 4.674486e-47 |
MsG0380017028.01 | MsG0680032554.01 | 0.823369 | 1.437341e-53 | 1.235071e-50 |
MsG0380017100.01 | MsG0680032554.01 | 0.831672 | 1.461839e-55 | 1.597472e-52 |
MsG0380017143.01 | MsG0680032554.01 | 0.801489 | 8.789976e-49 | 4.203205e-46 |
MsG0380017423.01 | MsG0680032554.01 | 0.808978 | 2.373832e-50 | 1.376704e-47 |
MsG0380017703.01 | MsG0680032554.01 | 0.848086 | 7.668944e-60 | 1.391184e-56 |
MsG0380018027.01 | MsG0680032554.01 | 0.837798 | 4.202060e-57 | 5.519624e-54 |
MsG0380018037.01 | MsG0680032554.01 | 0.821876 | 3.197482e-53 | 2.633804e-50 |
MsG0380018061.01 | MsG0680032554.01 | 0.804662 | 1.939620e-49 | 1.005885e-46 |
MsG0380018069.01 | MsG0680032554.01 | 0.826302 | 2.923450e-54 | 2.731026e-51 |
MsG0580027394.01 | MsG0680032554.01 | 0.822272 | 2.588097e-53 | 2.156079e-50 |
MsG0580027887.01 | MsG0680032554.01 | 0.833067 | 6.597720e-56 | 7.514809e-53 |
MsG0580028059.01 | MsG0680032554.01 | 0.806870 | 6.668274e-50 | 3.659746e-47 |
MsG0580028111.01 | MsG0680032554.01 | 0.800974 | 1.120475e-48 | 5.288949e-46 |
MsG0580028306.01 | MsG0680032554.01 | 0.805562 | 1.257088e-49 | 6.671720e-47 |
MsG0580028335.01 | MsG0680032554.01 | 0.813815 | 2.114104e-51 | 1.394813e-48 |
MsG0580028461.01 | MsG0680032554.01 | 0.827973 | 1.163891e-54 | 1.141330e-51 |
MsG0580028800.01 | MsG0680032554.01 | 0.810121 | 1.349261e-50 | 8.065923e-48 |
MsG0580028846.01 | MsG0680032554.01 | 0.807782 | 4.272042e-50 | 2.400859e-47 |
MsG0580029354.01 | MsG0680032554.01 | 0.810355 | 1.201454e-50 | 7.226183e-48 |
MsG0580029529.01 | MsG0680032554.01 | 0.801031 | 1.090664e-48 | 5.155770e-46 |
MsG0580029878.01 | MsG0680032554.01 | 0.837965 | 3.806689e-57 | 5.026028e-54 |
MsG0680030627.01 | MsG0680032554.01 | 0.845586 | 3.701969e-59 | 6.198312e-56 |
MsG0280006718.01 | MsG0680032554.01 | 0.810356 | 1.200501e-50 | 7.220760e-48 |
MsG0280006805.01 | MsG0680032554.01 | 0.829671 | 4.518991e-55 | 4.656831e-52 |
MsG0280007502.01 | MsG0680032554.01 | 0.825176 | 5.406298e-54 | 4.891505e-51 |
MsG0280007831.01 | MsG0680032554.01 | 0.806020 | 1.007517e-49 | 5.410706e-47 |
MsG0280008388.01 | MsG0680032554.01 | 0.825325 | 4.984854e-54 | 4.529282e-51 |
MsG0280008394.01 | MsG0680032554.01 | 0.807180 | 5.733453e-50 | 3.172089e-47 |
MsG0280008451.01 | MsG0680032554.01 | 0.813184 | 2.910450e-51 | 1.887430e-48 |
MsG0280008591.01 | MsG0680032554.01 | 0.864530 | 1.137800e-64 | 3.583742e-61 |
MsG0280008942.01 | MsG0680032554.01 | 0.802160 | 6.401394e-49 | 3.113588e-46 |
MsG0280009430.01 | MsG0680032554.01 | 0.832007 | 1.208610e-55 | 1.333876e-52 |
MsG0280009431.01 | MsG0680032554.01 | 0.805720 | 1.164848e-49 | 6.207896e-47 |
MsG0280010353.01 | MsG0680032554.01 | 0.827264 | 1.721985e-54 | 1.654100e-51 |
MsG0280010376.01 | MsG0680032554.01 | 0.853700 | 2.009361e-61 | 4.379626e-58 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032554.01.T01 | MTR_2g044920 | 78.947 | 38 | 8 | 0 | 3 | 40 | 118 | 155 | 2.09e-15 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032554.01.T01 | AT1G48350 | 76.316 | 38 | 9 | 0 | 3 | 40 | 122 | 159 | 3.06e-15 | 66.2 |
Find 19 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAAATCCTGTCTGGAAAT+AGG | 0.169851 | 6:+44625308 | MsG0680032554.01.T01:CDS |
CAAAATCCTGTCTGGAAATA+GGG | 0.298158 | 6:+44625309 | MsG0680032554.01.T01:CDS |
AGCTTTAACACGGCCATGTA+TGG | 0.343276 | 6:-44625365 | None:intergenic |
AATCATTGCAAAATCCTGTC+TGG | 0.467654 | 6:+44625301 | MsG0680032554.01.T01:CDS |
TGTGATCCCTATTTCCAGAC+AGG | 0.474164 | 6:-44625315 | None:intergenic |
GCTGATGCGGCTCGCGAACA+TGG | 0.492801 | 6:+44625391 | MsG0680032554.01.T01:CDS |
TGTTAAAGCTATTGCTGATG+CGG | 0.547812 | 6:+44625378 | MsG0680032554.01.T01:CDS |
GCTTTAACACGGCCATGTAT+GGG | 0.551225 | 6:-44625364 | None:intergenic |
CAGAGGTGGTTACCCATACA+TGG | 0.553024 | 6:+44625352 | MsG0680032554.01.T01:CDS |
TGGGTAACCACCTCTGTCAA+AGG | 0.569219 | 6:-44625345 | None:intergenic |
ACAAAGGTAGCCTTTGACAG+AGG | 0.569891 | 6:+44625335 | MsG0680032554.01.T01:CDS |
ATGTTTAAATTTGTAACCCG+AGG | 0.580603 | 6:+44625449 | MsG0680032554.01.T01:CDS |
GCTTCAGGAAGTAGCAAAGA+GGG | 0.581508 | 6:+44625271 | None:intergenic |
AAGGTAGCCTTTGACAGAGG+TGG | 0.614954 | 6:+44625338 | MsG0680032554.01.T01:CDS |
CATCAGCAATAGCTTTAACA+CGG | 0.627319 | 6:-44625375 | None:intergenic |
TGCTTCAGGAAGTAGCAAAG+AGG | 0.655766 | 6:+44625270 | None:intergenic |
TCAGGAAGTAGCAAAGAGGG+TGG | 0.657714 | 6:+44625274 | MsG0680032554.01.T01:CDS |
CAGGAAGTAGCAAAGAGGGT+GGG | 0.658309 | 6:+44625275 | MsG0680032554.01.T01:CDS |
TCTGGAAATAGGGATCACAA+AGG | 0.730190 | 6:+44625319 | MsG0680032554.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATTGTTTAAATCCT+CGG | - | Chr6:44625469-44625488 | None:intergenic | 15.0% |
!! | AAAAAATTGTTTAAATCCTC+GGG | - | Chr6:44625468-44625487 | None:intergenic | 20.0% |
ATGTTTAAATTTGTAACCCG+AGG | + | Chr6:44625449-44625468 | MsG0680032554.01.T01:CDS | 30.0% | |
AATCATTGCAAAATCCTGTC+TGG | + | Chr6:44625301-44625320 | MsG0680032554.01.T01:CDS | 35.0% | |
CAAAATCCTGTCTGGAAATA+GGG | + | Chr6:44625309-44625328 | MsG0680032554.01.T01:CDS | 35.0% | |
TGTTAAAGCTATTGCTGATG+CGG | + | Chr6:44625378-44625397 | MsG0680032554.01.T01:CDS | 35.0% | |
!! | CATCAGCAATAGCTTTAACA+CGG | - | Chr6:44625378-44625397 | None:intergenic | 35.0% |
!!! | AATGCTGATTTTAGAACTCG+AGG | - | Chr6:44625417-44625436 | None:intergenic | 35.0% |
GCAAAATCCTGTCTGGAAAT+AGG | + | Chr6:44625308-44625327 | MsG0680032554.01.T01:CDS | 40.0% | |
TCTGGAAATAGGGATCACAA+AGG | + | Chr6:44625319-44625338 | MsG0680032554.01.T01:CDS | 40.0% | |
ACAAAGGTAGCCTTTGACAG+AGG | + | Chr6:44625335-44625354 | MsG0680032554.01.T01:CDS | 45.0% | |
GCTTTAACACGGCCATGTAT+GGG | - | Chr6:44625367-44625386 | None:intergenic | 45.0% | |
TGTGATCCCTATTTCCAGAC+AGG | - | Chr6:44625318-44625337 | None:intergenic | 45.0% | |
! | AGCTTTAACACGGCCATGTA+TGG | - | Chr6:44625368-44625387 | None:intergenic | 45.0% |
AAGGTAGCCTTTGACAGAGG+TGG | + | Chr6:44625338-44625357 | MsG0680032554.01.T01:CDS | 50.0% | |
CAGAGGTGGTTACCCATACA+TGG | + | Chr6:44625352-44625371 | MsG0680032554.01.T01:CDS | 50.0% | |
CAGGAAGTAGCAAAGAGGGT+GGG | + | Chr6:44625275-44625294 | MsG0680032554.01.T01:CDS | 50.0% | |
TCAGGAAGTAGCAAAGAGGG+TGG | + | Chr6:44625274-44625293 | MsG0680032554.01.T01:CDS | 50.0% | |
TGGGTAACCACCTCTGTCAA+AGG | - | Chr6:44625348-44625367 | None:intergenic | 50.0% | |
GCTGATGCGGCTCGCGAACA+TGG | + | Chr6:44625391-44625410 | MsG0680032554.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 44625272 | 44625490 | 44625272 | ID=MsG0680032554.01;Name=MsG0680032554.01 |
Chr6 | mRNA | 44625272 | 44625490 | 44625272 | ID=MsG0680032554.01.T01;Parent=MsG0680032554.01;Name=MsG0680032554.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|0|1|0|72 |
Chr6 | exon | 44625272 | 44625490 | 44625272 | ID=MsG0680032554.01.T01:exon:11890;Parent=MsG0680032554.01.T01 |
Chr6 | CDS | 44625272 | 44625490 | 44625272 | ID=MsG0680032554.01.T01:cds;Parent=MsG0680032554.01.T01 |
Chr6 | mRNA | 44625371 | 44625490 | 44625371 | ID=MsG0680032554.01.T02;Parent=MsG0680032554.01;Name=MsG0680032554.01.T02;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|0|1|0|39 |
Chr6 | exon | 44625371 | 44625490 | 44625371 | ID=MsG0680032554.01.T02:exon:11891;Parent=MsG0680032554.01.T02 |
Chr6 | CDS | 44625371 | 44625490 | 44625371 | ID=MsG0680032554.01.T02:cds;Parent=MsG0680032554.01.T02 |
Gene Sequence |
Protein sequence |