AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218480 MtrunA17_Chr2g0320641 86.542 483 26 3 1 483 1 444 0.0 815
Msa0218480 MtrunA17_Chr8g0380621 22.951 366 242 8 138 483 75 420 1.59e-18 87.8
Msa0218480 MtrunA17_Chr8g0384941 26.440 382 231 11 129 472 43 412 1.64e-15 78.6
Msa0218480 MtrunA17_Chr1g0187901 25.613 367 234 9 129 474 33 381 8.49e-15 76.3
Msa0218480 MtrunA17_Chr1g0165861 25.389 193 124 5 290 470 7 191 3.00e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218480 AT5G22830.1 71.159 371 73 3 113 483 123 459 2.02e-172 493
Msa0218480 AT5G22830.2 71.159 371 73 3 113 483 123 459 2.02e-172 493
Msa0218480 AT5G09690.2 24.031 387 236 8 123 483 41 395 5.23e-20 92.4
Msa0218480 AT5G09690.1 24.031 387 236 8 123 483 30 384 5.28e-20 92.0
Msa0218480 AT5G09690.12 23.656 372 223 6 123 471 41 374 2.96e-18 87.0
Msa0218480 AT5G64560.1 25.538 372 231 10 136 482 41 391 1.26e-16 82.0
Msa0218480 AT1G80900.2 24.265 408 242 9 123 483 54 441 1.68e-15 79.0
Msa0218480 AT1G80900.1 24.265 408 242 9 123 483 54 441 1.68e-15 79.0
Msa0218480 AT1G16010.3 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218480 AT1G16010.1 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218480 AT1G16010.2 24.755 408 237 12 123 482 54 439 1.17e-14 76.3
Msa0218480 AT4G28580.1 20.161 372 238 10 137 483 70 407 4.41e-12 68.2

Find 163 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGATTTCAGGCATATT+TGG 0.179020 2_1:-65652100 Msa0218480:intron
GCAGATGCTGCTTGATCTTC+TGG 0.225940 2_1:-65654026 Msa0218480:CDS
AATACGGAGGATATGTATTA+TGG 0.232489 2_1:-65653990 Msa0218480:CDS
ACCACATCTGGGATTATTAT+TGG 0.241757 2_1:-65651920 Msa0218480:CDS
ATTTAATGCAGTTTGCATTT+TGG 0.259440 2_1:-65651946 Msa0218480:intron
ATGAATAATTTATCCGGATT+TGG 0.261474 2_1:+65658055 None:intergenic
TTCACTTTAGTTGATAATAT+TGG 0.271055 2_1:-65651025 Msa0218480:three_prime_UTR
GGCCCTCCATTGTTGCTCTT+GGG 0.287052 2_1:+65656148 None:intergenic
GCCTTACCAAATCGGATAAC+TGG 0.292260 2_1:-65654207 Msa0218480:CDS
TGGCCCTCCATTGTTGCTCT+TGG 0.305119 2_1:+65656147 None:intergenic
TACTTATATTTGATTATAAT+CGG 0.307648 2_1:-65656332 Msa0218480:intron
GCACTGAGCATTCCACATTA+TGG 0.309684 2_1:+65653939 None:intergenic
AGGATTGCAACCACCTCTTC+TGG 0.321443 2_1:-65657625 Msa0218480:CDS
TACCAACCTTGTTCCGTTCC+CGG 0.326223 2_1:-65657999 Msa0218480:five_prime_UTR
TCAATCTACGGAAATGGATT+TGG 0.328492 2_1:-65651328 Msa0218480:three_prime_UTR
AAATTCAATGCCTTCTTTGC+TGG 0.336908 2_1:-65656718 Msa0218480:intron
CTTAGAACCTCGTGTGAGTA+TGG 0.342447 2_1:-65654950 Msa0218480:CDS
CATATCCTCCGTATTTCATC+TGG 0.346335 2_1:+65653998 None:intergenic
GGAGGAAATTGAGATGCTTC+TGG 0.351803 2_1:-65653783 Msa0218480:CDS
TCGATTTCAAATGGCATTGA+TGG 0.352449 2_1:+65656127 None:intergenic
CCAAATTGCTAGGTTGAGTT+AGG 0.366760 2_1:-65654070 Msa0218480:intron
TCTTGATTCTGCAAGGGAAA+TGG 0.368944 2_1:-65653290 Msa0218480:CDS
ATATCCCCAGTTATCCGATT+TGG 0.369292 2_1:+65654201 None:intergenic
GGAATCAGACGCGACGGTTT+CGG 0.372599 2_1:+65657714 None:intergenic
ACTGCTTCACAGGTTCATAA+TGG 0.379206 2_1:-65651208 Msa0218480:intron
TCGGATAACTGGGGATATAC+TGG 0.379701 2_1:-65654196 Msa0218480:CDS
CGCTAGGTTGTTGCTTGTGT+GGG 0.382031 2_1:-65651151 Msa0218480:three_prime_UTR
AGAAATTGTACAATAAATAA+AGG 0.382181 2_1:-65653965 Msa0218480:CDS
CAAAGATCAATCTACGGAAA+TGG 0.393215 2_1:-65651334 Msa0218480:three_prime_UTR
GCTTTCAAGAATACAACGTT+TGG 0.393821 2_1:-65654989 Msa0218480:CDS
ACCATAATAAAACAGGTATC+TGG 0.398082 2_1:-65650893 Msa0218480:three_prime_UTR
ATCTGGCTCCATTAATTGTT+GGG 0.403216 2_1:-65650876 Msa0218480:three_prime_UTR
ATTCTATAGCTGTCAGTTTG+AGG 0.409615 2_1:-65653264 Msa0218480:intron
CCTAGCGAAGAGTCTCTTGA+TGG 0.410988 2_1:+65651167 None:intergenic
TCAGACGAAACTTCAAATAT+AGG 0.411397 2_1:-65651839 Msa0218480:intron
GCCCTCCATTGTTGCTCTTG+GGG 0.412124 2_1:+65656149 None:intergenic
TTTAATTTCTTCGTAAGGAT+TGG 0.415238 2_1:+65650932 None:intergenic
TTCTTGAGGCCTTACCAAAT+CGG 0.421971 2_1:-65654215 Msa0218480:CDS
ATAGAACGAACTTCATAAAC+AGG 0.428110 2_1:+65657574 None:intergenic
CACGGAGGCTTGAAGTTAGC+AGG 0.431686 2_1:-65652742 Msa0218480:CDS
GTTCCTCAAGATAGGACTTC+AGG 0.433942 2_1:+65652071 None:intergenic
AGTGGCGACGGTGGAGGTTA+CGG 0.436072 2_1:+65657964 None:intergenic
ATCCATGCACTGCGTGACTC+TGG 0.443866 2_1:+65650959 None:intergenic
TCGTATTAGCAAACAAACTT+TGG 0.451649 2_1:-65654166 Msa0218480:intron
AAATGCATGAATAATTTATC+CGG 0.456117 2_1:+65658049 None:intergenic
GTATGCTATACTTCTAAACT+TGG 0.456498 2_1:-65656388 Msa0218480:CDS
TATCTGGCTCCATTAATTGT+TGG 0.458068 2_1:-65650877 Msa0218480:three_prime_UTR
GTGCACAATCACTGCATTTG+TGG 0.458974 2_1:+65651356 None:intergenic
CAACAGACCTCGATTTCAAA+TGG 0.463876 2_1:+65656118 None:intergenic
TTATTCAGGTCTTCGTCCAC+GGG 0.464836 2_1:-65656775 Msa0218480:intron
CAGGGTGGAACTGCTTCTCC+AGG 0.465720 2_1:-65652723 Msa0218480:CDS
TTCTAGAGTCATTGCTGCCT+CGG 0.468702 2_1:-65656177 Msa0218480:CDS
TGCACAATCACTGCATTTGT+GGG 0.470159 2_1:+65651357 None:intergenic
CTCAGTGCCTTTAGACAAGC+AGG 0.471829 2_1:-65653924 Msa0218480:CDS
ATACGGAGGATATGTATTAT+GGG 0.472338 2_1:-65653989 Msa0218480:CDS
TCTTGTGAAAGTTTGAATGA+TGG 0.472966 2_1:-65650838 Msa0218480:three_prime_UTR
CATTTCACCGGCTTGAGCGC+AGG 0.474067 2_1:+65657778 None:intergenic
AATTATTTAATTTCTTCGTA+AGG 0.478443 2_1:+65650927 None:intergenic
AGATATTATACCAGCAAAGA+AGG 0.478493 2_1:+65656708 None:intergenic
CAAAATATGTACCTGCTACA+AGG 0.478564 2_1:+65652672 None:intergenic
GCAGTTGGTGCCCTTGTAGC+AGG 0.482970 2_1:-65652683 Msa0218480:intron
GATTTACACCATAATAAAAC+AGG 0.490449 2_1:-65650900 Msa0218480:three_prime_UTR
CCCAGTTATCCGATTTGGTA+AGG 0.493190 2_1:+65654206 None:intergenic
AAAGGTTGGAAGCGAAAGTG+AGG 0.504236 2_1:+65657904 None:intergenic
TTCATCATCAACAGCTTCAT+CGG 0.505527 2_1:+65657693 None:intergenic
ATTATTCAGGTCTTCGTCCA+CGG 0.515753 2_1:-65656776 Msa0218480:intron
TCGGTTTCAGCGTCGTTCCA+CGG 0.517395 2_1:+65657733 None:intergenic
TGCATGCCGGGAACGGAACA+AGG 0.518041 2_1:+65657993 None:intergenic
GTTGTAGAAGTGAAATCAGA+TGG 0.519105 2_1:-65657372 Msa0218480:CDS
TCGCTAGGTTGTTGCTTGTG+TGG 0.519298 2_1:-65651152 Msa0218480:three_prime_UTR
CCTTACCAAATCGGATAACT+GGG 0.519888 2_1:-65654206 Msa0218480:CDS
ACTTCTGAATTTAACTAACA+TGG 0.520719 2_1:-65657944 Msa0218480:exon
TCAGCAACCTGCTTGTCTAA+AGG 0.527323 2_1:+65653917 None:intergenic
GAAGAGGTGGTTGCAATCCT+CGG 0.527378 2_1:+65657628 None:intergenic
TTCTGGAAAATTATCTCCAA+AGG 0.529417 2_1:-65653766 Msa0218480:intron
TGGAGGACCCAGATGAAATA+CGG 0.529419 2_1:-65654006 Msa0218480:CDS
CACCACACGTTCCTCAAGAT+AGG 0.530197 2_1:+65652063 None:intergenic
GTCCAGAGTCACGCAGTGCA+TGG 0.530398 2_1:-65650961 Msa0218480:three_prime_UTR
GGAACATTCTGTGTGGCAGT+TGG 0.533059 2_1:-65652698 Msa0218480:CDS
CTCATGATATGTAGAGGAGG+AGG 0.534424 2_1:-65653804 Msa0218480:intron
AACGGAACAAGGTTGGTAGT+TGG 0.534970 2_1:+65658004 None:intergenic
GTGGATCTACTGCATTTCAC+CGG 0.543097 2_1:+65657766 None:intergenic
TTCAGAAGTGGCGACGGTGG+AGG 0.543793 2_1:+65657958 None:intergenic
AAAATATGTACCTGCTACAA+GGG 0.544963 2_1:+65652673 None:intergenic
AAAGGCTTCTTGATTCTGCA+AGG 0.546966 2_1:-65653297 Msa0218480:CDS
CGGTGAGGTCGGAGAAGAAG+AGG 0.549065 2_1:+65657863 None:intergenic
ATGATATGTAGAGGAGGAGG+AGG 0.550490 2_1:-65653801 Msa0218480:intron
CTTGTCACGGTCAAGCTGAA+AGG 0.554270 2_1:-65653315 Msa0218480:CDS
GTCGGAGAAGAAGAGGTAGT+TGG 0.555331 2_1:+65657870 None:intergenic
ATTCTCTCACTCTTCTTCGC+CGG 0.555446 2_1:-65657825 Msa0218480:CDS
GTGGAACTGCTTCTCCAGGT+TGG 0.558353 2_1:-65652719 Msa0218480:CDS
TCTGGAGATTCTCTATCGCT+CGG 0.560572 2_1:-65657607 Msa0218480:CDS
GTGAGAGAATCGTGGAATTG+TGG 0.560861 2_1:+65657838 None:intergenic
GTTGAGTTAGGCTCAAGGGC+AGG 0.569703 2_1:-65654058 Msa0218480:CDS
TTTAGACAAGCAGGTTGCTG+AGG 0.573002 2_1:-65653915 Msa0218480:CDS
TATGCTATACTTCTAAACTT+GGG 0.574188 2_1:-65656387 Msa0218480:CDS
TTAAACCCCAAGAGCAACAA+TGG 0.574463 2_1:-65656154 Msa0218480:CDS
ATCAATGCCATTTGAAATCG+AGG 0.574990 2_1:-65656125 Msa0218480:intron
ACCCCAAGAGCAACAATGGA+GGG 0.575827 2_1:-65656150 Msa0218480:CDS
ACATCTGGGATTATTATTGG+TGG 0.576146 2_1:-65651917 Msa0218480:CDS
CTAGGTTGAGTTAGGCTCAA+GGG 0.577286 2_1:-65654062 Msa0218480:intron
ATTGGTGTTGTATGATCAAG+TGG 0.578348 2_1:-65651007 Msa0218480:three_prime_UTR
TAGTTGGTGCGCGTGAGGAA+AGG 0.579052 2_1:+65657886 None:intergenic
AGTGTAAAAGACGACGCAGA+AGG 0.580230 2_1:-65655403 Msa0218480:CDS
ATGTTAGTTAAATTCAGAAG+TGG 0.580810 2_1:+65657946 None:intergenic
GCTAGGTTGAGTTAGGCTCA+AGG 0.583177 2_1:-65654063 Msa0218480:intron
CAAGAATACAACGTTTGGAG+CGG 0.585508 2_1:-65654984 Msa0218480:CDS
ACGTTTGGAGCGGAGACTGA+TGG 0.587474 2_1:-65654974 Msa0218480:CDS
ACCAATAATAATCCCAGATG+TGG 0.587896 2_1:+65651919 None:intergenic
GAGCGCAGGCGATGATGTAA+CGG 0.588365 2_1:+65657792 None:intergenic
TGCCGGGAACGGAACAAGGT+TGG 0.588656 2_1:+65657997 None:intergenic
AACTTTCACAAGAACTCGGT+AGG 0.589539 2_1:+65650848 None:intergenic
GAATTGTGGTTCGGTGAGGT+CGG 0.590714 2_1:+65657852 None:intergenic
AGAGGTAGTTGGTGCGCGTG+AGG 0.591230 2_1:+65657881 None:intergenic
ATCATCGCCTGCGCTCAAGC+CGG 0.591808 2_1:-65657785 Msa0218480:CDS
CCACACAGAATGTTCCAACC+TGG 0.592527 2_1:+65652705 None:intergenic
CCATCAAGAGACTCTTCGCT+AGG 0.592834 2_1:-65651167 Msa0218480:three_prime_UTR
CTAGGTTCAAGCTCTTCTTG+AGG 0.592984 2_1:-65654229 Msa0218480:intron
AAGGCTTCTTGATTCTGCAA+GGG 0.595349 2_1:-65653296 Msa0218480:CDS
GTTAAATTCAGAAGTGGCGA+CGG 0.598296 2_1:+65657952 None:intergenic
TGGTGCGCGTGAGGAAAGGT+TGG 0.598690 2_1:+65657890 None:intergenic
GACGCAGAAGGATCTAAAGA+TGG 0.601591 2_1:-65655391 Msa0218480:CDS
TGTGCACAAAGATCAATCTA+CGG 0.603651 2_1:-65651340 Msa0218480:three_prime_UTR
TTAGACAAGCAGGTTGCTGA+GGG 0.603811 2_1:-65653914 Msa0218480:intron
TTCAAACTTTCACAAGAACT+CGG 0.604203 2_1:+65650844 None:intergenic
TGTATAACTACCTCAGAGCA+AGG 0.605896 2_1:-65651874 Msa0218480:CDS
GAGTCACGCAGTGCATGGAT+CGG 0.611874 2_1:-65650956 Msa0218480:three_prime_UTR
AAATAAAGGAAACCATAATG+TGG 0.613910 2_1:-65653951 Msa0218480:CDS
AGACAATTATTGAAGTCTAG+TGG 0.615214 2_1:-65657321 Msa0218480:intron
TTTACATAAGAACTGCATGA+AGG 0.616048 2_1:-65651070 Msa0218480:three_prime_UTR
GATGCTGCTTGATCTTCTGG+AGG 0.616845 2_1:-65654023 Msa0218480:CDS
ATATCCTCCGTATTTCATCT+GGG 0.617091 2_1:+65653999 None:intergenic
GAACCTGAAGTCCTATCTTG+AGG 0.617632 2_1:-65652074 Msa0218480:CDS
GGTAACAATTCCATTGCAGA+AGG 0.618379 2_1:-65655370 Msa0218480:CDS
TTGTAGAAGTGAAATCAGAT+GGG 0.624691 2_1:-65657371 Msa0218480:CDS
AGAATCGTGGAATTGTGGTT+CGG 0.624798 2_1:+65657843 None:intergenic
TCCACGGGACGTTAGAAGTG+TGG 0.625060 2_1:-65656760 Msa0218480:CDS
TCCACACTTCTAACGTCCCG+TGG 0.632114 2_1:+65656759 None:intergenic
AAATTCAGAAGTGGCGACGG+TGG 0.632676 2_1:+65657955 None:intergenic
TTCATCGGAATCAGACGCGA+CGG 0.634341 2_1:+65657708 None:intergenic
GCTGTTGATGATGAATCAAA+CGG 0.636421 2_1:-65657685 Msa0218480:CDS
TGCAGATGTGAATCTTGTCA+CGG 0.638670 2_1:-65653328 Msa0218480:intron
AACCCCAAGAGCAACAATGG+AGG 0.639651 2_1:-65656151 Msa0218480:CDS
CGATAGAGAATCTCCAGAAG+AGG 0.640168 2_1:+65657612 None:intergenic
GGCGACGGTGGAGGTTACGG+TGG 0.641123 2_1:+65657967 None:intergenic
TAGAGAATCTCCAGAAGAGG+TGG 0.641979 2_1:+65657615 None:intergenic
CGTGGAATTGTGGTTCGGTG+AGG 0.648235 2_1:+65657848 None:intergenic
ACGGAGGCTTGAAGTTAGCA+GGG 0.650280 2_1:-65652741 Msa0218480:CDS
CTTCTTCAATAGAGTCTCCG+AGG 0.650707 2_1:-65657645 Msa0218480:CDS
GGTGAAATGCAGTAGATCCA+CGG 0.652611 2_1:-65657764 Msa0218480:CDS
TTGCTCTTGGGGTTTAACCG+AGG 0.658451 2_1:+65656160 None:intergenic
GATCCACGGAAGAAAAGCCG+TGG 0.662772 2_1:-65657750 Msa0218480:CDS
CCAGGTTGGAACATTCTGTG+TGG 0.669557 2_1:-65652705 Msa0218480:CDS
GCAGAAGGCCAAGAAAAGTG+TGG 0.677081 2_1:-65655355 Msa0218480:CDS
TTAGAAGTATAGCATACTCA+CGG 0.677451 2_1:+65656394 None:intergenic
GTCCTATCTTGAGGAACGTG+TGG 0.678140 2_1:-65652065 Msa0218480:intron
GCTCAAGGGCAGGAGCTCTG+AGG 0.680229 2_1:-65654048 Msa0218480:CDS
GAAGAAGAGTGAGAGAATCG+TGG 0.707159 2_1:+65657830 None:intergenic
TTCCATTCAACAGCTCACGG+AGG 0.732721 2_1:-65652757 Msa0218480:intron
TGTGTTTCCATACTCACACG+AGG 0.733801 2_1:+65654943 None:intergenic
GAGGCTTGAAGTTAGCAGGG+TGG 0.735608 2_1:-65652738 Msa0218480:CDS
CTTACCAAATCGGATAACTG+GGG 0.745411 2_1:-65654205 Msa0218480:CDS
AGGACCCAGATGAAATACGG+AGG 0.746792 2_1:-65654003 Msa0218480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATAATAATTTTATTTTGAT+TGG - chr2_1:65651981-65652000 Msa0218480:intron 10.0%
!! TACTTATATTTGATTATAAT+CGG - chr2_1:65652608-65652627 Msa0218480:intron 10.0%
!!! GTTTTTTTTTTTTTTTAAAG+AGG + chr2_1:65653730-65653749 None:intergenic 10.0%
!! TAAAAAAAAAAAAAAACTGA+AGG - chr2_1:65653733-65653752 Msa0218480:intron 10.0%
!!! AAAAAATGATTTTAAGATTA+TGG - chr2_1:65654304-65654323 Msa0218480:intron 10.0%
!! TGAATAATATAAATTAAGTT+TGG + chr2_1:65656351-65656370 None:intergenic 10.0%
!!! ACAAAAATAAAATTTAAAGT+AGG - chr2_1:65657347-65657366 Msa0218480:CDS 10.0%
! CGGCCGGGGGGGGGGGGGGG+GGG - chr2_1:65655722-65655741 Msa0218480:intron 100.0%
! GGCCGGGGGGGGGGGGGGGG+GGG - chr2_1:65655723-65655742 Msa0218480:intron 100.0%
! GCCGGGGGGGGGGGGGGGGG+GGG - chr2_1:65655724-65655743 Msa0218480:intron 100.0%
! CCCCCCCCCCCCCCCCCCCC+CGG + chr2_1:65655727-65655746 None:intergenic 100.0%
! CCGGGGGGGGGGGGGGGGGG+GGG - chr2_1:65655725-65655744 Msa0218480:intron 100.0%
!!! TATTATTTGATGGATTTTAT+AGG + chr2_1:65650853-65650872 None:intergenic 15.0%
!! AATAATAAAAAAACCAAATC+CGG - chr2_1:65650872-65650891 Msa0218480:three_prime_UTR 15.0%
!! ACATTGTGATTATTATATTT+GGG + chr2_1:65651892-65651911 None:intergenic 15.0%
!! AACATTGTGATTATTATATT+TGG + chr2_1:65651893-65651912 None:intergenic 15.0%
!! ACAAAAGAAAAATTTGAAAA+TGG - chr2_1:65653012-65653031 Msa0218480:intron 15.0%
!! AATAAAAACTTATTTGAACA+CGG - chr2_1:65653264-65653283 Msa0218480:intron 15.0%
!!! ATTACATATTTTTATTAGCA+TGG - chr2_1:65654263-65654282 Msa0218480:intron 15.0%
!!! TTCAACTTTATTTTTTTACA+AGG - chr2_1:65654432-65654451 Msa0218480:intron 15.0%
!!! TACTCTAAAATATTTCAATA+AGG + chr2_1:65654581-65654600 None:intergenic 15.0%
!!! TTATTGAAATATTTTAGAGT+AGG - chr2_1:65654580-65654599 Msa0218480:intron 15.0%
!! AGAAATTGTACAATAAATAA+AGG - chr2_1:65654975-65654994 Msa0218480:CDS 15.0%
!! ACTATTATACTATTATACTA+TGG + chr2_1:65655947-65655966 None:intergenic 15.0%
!! GTATAATATTATTACATTCA+AGG - chr2_1:65655965-65655984 Msa0218480:intron 15.0%
!! TTAAGTTTGGTTAAAATTAT+GGG + chr2_1:65656338-65656357 None:intergenic 15.0%
!! ATTAAGTTTGGTTAAAATTA+TGG + chr2_1:65656339-65656358 None:intergenic 15.0%
!!! GTTAATTATAAATTTGTTAG+TGG - chr2_1:65656442-65656461 Msa0218480:intron 15.0%
!! AATAAAAATACATTAAGAAG+AGG + chr2_1:65657166-65657185 None:intergenic 15.0%
!! ATCTATTCATCTTATTATTT+AGG + chr2_1:65657280-65657299 None:intergenic 15.0%
!!! CAGGTTATTTTAAAATATTA+AGG - chr2_1:65657550-65657569 Msa0218480:intron 15.0%
!!! AATTATTTAATTTCTTCGTA+AGG + chr2_1:65658016-65658035 None:intergenic 15.0%
!! AAATGCATGAATAATTTATC+CGG + chr2_1:65650894-65650913 None:intergenic 20.0%
!! ATTACTATGAAATTATGTTG+TGG - chr2_1:65651406-65651425 Msa0218480:intron 20.0%
!! GATAACATCAAATTCAAAAT+AGG - chr2_1:65651923-65651942 Msa0218480:CDS 20.0%
!! ATGATATAAATATGTTAGCA+GGG + chr2_1:65652114-65652133 None:intergenic 20.0%
!! AATGATATAAATATGTTAGC+AGG + chr2_1:65652115-65652134 None:intergenic 20.0%
!! TATCATTTCTTAATACCTTA+TGG - chr2_1:65652264-65652283 Msa0218480:intron 20.0%
!! CTGAAATAATTCATATGTTA+TGG - chr2_1:65652643-65652662 Msa0218480:intron 20.0%
!! TCAATAATTAGCGTATTAAA+TGG + chr2_1:65652860-65652879 None:intergenic 20.0%
!!! TTGAAAATGGTTTATTTTCA+AGG - chr2_1:65653025-65653044 Msa0218480:intron 20.0%
!!! TGAAAATGGTTTATTTTCAA+GGG - chr2_1:65653026-65653045 Msa0218480:intron 20.0%
!!! TTTTCTTTCTTTTGTCTTAT+AGG + chr2_1:65653246-65653265 None:intergenic 20.0%
!!! TCGTTCATAATTTTATTTTG+AGG - chr2_1:65653366-65653385 Msa0218480:intron 20.0%
!!! CGTTCATAATTTTATTTTGA+GGG - chr2_1:65653367-65653386 Msa0218480:intron 20.0%
!! TATACTTAAGTATGCATTTA+TGG - chr2_1:65653419-65653438 Msa0218480:intron 20.0%
!!! GAGTAGATTTTTAAGTAATT+GGG - chr2_1:65653675-65653694 Msa0218480:intron 20.0%
!!! AGTAGATTTTTAAGTAATTG+GGG - chr2_1:65653676-65653695 Msa0218480:intron 20.0%
!! CAAAAACTGGTAAAAATTTA+TGG - chr2_1:65654140-65654159 Msa0218480:intron 20.0%
!! GATCTTAACAGTATTATAAA+TGG - chr2_1:65654224-65654243 Msa0218480:CDS 20.0%
!!! TTCTAATTTTCTTAAGATCT+TGG + chr2_1:65654463-65654482 None:intergenic 20.0%
!!! TGAAAGATTACTTTTACTTT+GGG + chr2_1:65654501-65654520 None:intergenic 20.0%
!!! ATGAAAGATTACTTTTACTT+TGG + chr2_1:65654502-65654521 None:intergenic 20.0%
!!! TCTAAAATATTTCAATAAGG+AGG + chr2_1:65654578-65654597 None:intergenic 20.0%
!! AGAAATGGTTATTTAAATCA+GGG + chr2_1:65654672-65654691 None:intergenic 20.0%
!! TTAAACTCTTGCAATTAAAA+TGG - chr2_1:65656021-65656040 Msa0218480:intron 20.0%
!! CAAAGTTATTAGAACAAATA+AGG + chr2_1:65656162-65656181 None:intergenic 20.0%
!! CTTATTTGTTCTAATAACTT+TGG - chr2_1:65656160-65656179 Msa0218480:CDS 20.0%
!!! TTATAAATTTGTTAGTGGTT+TGG - chr2_1:65656447-65656466 Msa0218480:intron 20.0%
!!! AGAATATTTTGATATAGATC+AGG + chr2_1:65656820-65656839 None:intergenic 20.0%
!! AAATATTCTTTCATGATTTC+AGG - chr2_1:65656831-65656850 Msa0218480:intron 20.0%
!! TGTTAAATTAACCATATTTG+TGG - chr2_1:65656971-65656990 Msa0218480:intron 20.0%
!! ACTTAATCTATAAACAATTC+AGG - chr2_1:65657396-65657415 Msa0218480:intron 20.0%
!!! TTCACTTTAGTTGATAATAT+TGG - chr2_1:65657915-65657934 Msa0218480:CDS 20.0%
! ATGAATAATTTATCCGGATT+TGG + chr2_1:65650888-65650907 None:intergenic 25.0%
! ATGTTAGTTAAATTCAGAAG+TGG + chr2_1:65650997-65651016 None:intergenic 25.0%
! ACTTCTGAATTTAACTAACA+TGG - chr2_1:65650996-65651015 Msa0218480:three_prime_UTR 25.0%
! GAAGATAAAACTAATTAAGC+AGG - chr2_1:65651491-65651510 Msa0218480:intron 25.0%
! ATAAAATAGAAGACTACATG+AGG + chr2_1:65652020-65652039 None:intergenic 25.0%
! TCGTAAAAAATAAAAGCAGA+TGG + chr2_1:65652066-65652085 None:intergenic 25.0%
! GAATTTGTCAAAAACAATGA+TGG + chr2_1:65652208-65652227 None:intergenic 25.0%
! GTATTAAGAAATGATAGAGT+GGG + chr2_1:65652260-65652279 None:intergenic 25.0%
! CATTGTTTATAAGTACCATA+AGG + chr2_1:65652282-65652301 None:intergenic 25.0%
! CTTATGGTACTTATAAACAA+TGG - chr2_1:65652280-65652299 Msa0218480:intron 25.0%
!! GGAGTAGATTAATTTTTATG+AGG + chr2_1:65652434-65652453 None:intergenic 25.0%
! TATGCTATACTTCTAAACTT+GGG - chr2_1:65652553-65652572 Msa0218480:intron 25.0%
!!! TATTGATTTTTCACCAGTAA+AGG - chr2_1:65652729-65652748 Msa0218480:CDS 25.0%
! AATACGCTAATTATTGAATC+AGG - chr2_1:65652863-65652882 Msa0218480:intron 25.0%
! ATACGCTAATTATTGAATCA+GGG - chr2_1:65652864-65652883 Msa0218480:intron 25.0%
!! AAATTTTTCTTTTGTCAGAC+AGG + chr2_1:65653007-65653026 None:intergenic 25.0%
!! TTTTGTCTCATTAGAACAAA+TGG + chr2_1:65653112-65653131 None:intergenic 25.0%
!!! TAATTTTATTTTGAGGGATG+AGG - chr2_1:65653373-65653392 Msa0218480:intron 25.0%
!! CCAAAAATCATAACCATTTT+GGG + chr2_1:65653654-65653673 None:intergenic 25.0%
!! CCAAAATGGTTATGATTTTT+GGG - chr2_1:65653652-65653671 Msa0218480:intron 25.0%
!! CAAAATGGTTATGATTTTTG+GGG - chr2_1:65653653-65653672 Msa0218480:intron 25.0%
!!! GGAGTAGATTTTTAAGTAAT+TGG - chr2_1:65653674-65653693 Msa0218480:intron 25.0%
!! TGTTCTCATTTTGTATGTTA+GGG - chr2_1:65653819-65653838 Msa0218480:intron 25.0%
! AAATTCAACCATGGTAATTA+GGG + chr2_1:65653910-65653929 None:intergenic 25.0%
! AAAATTCAACCATGGTAATT+AGG + chr2_1:65653911-65653930 None:intergenic 25.0%
! ATGTTTATGTTCATTCTTTG+TGG - chr2_1:65654034-65654053 Msa0218480:CDS 25.0%
! GTTAAGATCTTATAGAATGT+CGG + chr2_1:65654213-65654232 None:intergenic 25.0%
!!! AAGTGTTTTTTTTAGAGCTT+TGG - chr2_1:65654330-65654349 Msa0218480:intron 25.0%
!!! AAAGATTACTTTTACTTTGG+GGG + chr2_1:65654499-65654518 None:intergenic 25.0%
!!! GAAAGATTACTTTTACTTTG+GGG + chr2_1:65654500-65654519 None:intergenic 25.0%
! GAGAAATGGTTATTTAAATC+AGG + chr2_1:65654673-65654692 None:intergenic 25.0%
!! TTTTTCTCATTAATCTTCAG+CGG - chr2_1:65654811-65654830 Msa0218480:intron 25.0%
! AAATAAAGGAAACCATAATG+TGG - chr2_1:65654989-65655008 Msa0218480:CDS 25.0%
!!! TTTTTTCTCATGATATGTAG+AGG - chr2_1:65655130-65655149 Msa0218480:intron 25.0%
! TGGATATTAATGGTAAGTAA+AGG + chr2_1:65655407-65655426 None:intergenic 25.0%
!!! GAATTTCTTTTTTCTCTCTT+CGG - chr2_1:65655702-65655721 Msa0218480:intron 25.0%
! TTTGACAAAGTATGTGAAAT+AGG - chr2_1:65656299-65656318 Msa0218480:intron 25.0%
! ATATTATTCACAATCTAGTC+TGG - chr2_1:65656361-65656380 Msa0218480:CDS 25.0%
! GTTTAATATACTTTCCATGA+AGG - chr2_1:65656639-65656658 Msa0218480:intron 25.0%
!! ATTTAATGCAGTTTGCATTT+TGG - chr2_1:65656994-65657013 Msa0218480:intron 25.0%
! AAAAATACATTAAGAAGAGG+AGG + chr2_1:65657163-65657182 None:intergenic 25.0%
!! TTTTATTCTTATTCCAGAGA+GGG - chr2_1:65657689-65657708 Msa0218480:CDS 25.0%
!!! TATGATCAAGTGGATTTTTA+GGG - chr2_1:65657943-65657962 Msa0218480:exon 25.0%
!! TTTAATTTCTTCGTAAGGAT+TGG + chr2_1:65658011-65658030 None:intergenic 25.0%
! GATTTACACCATAATAAAAC+AGG - chr2_1:65658040-65658059 Msa0218480:five_prime_UTR 25.0%
! TCTATTGAAGAAGTTTTGCT+CGG + chr2_1:65651288-65651307 None:intergenic 30.0%
ATAGAACGAACTTCATAAAC+AGG + chr2_1:65651369-65651388 None:intergenic 30.0%
GTTCAATGAACTAAAACCAT+AGG - chr2_1:65651463-65651482 Msa0218480:intron 30.0%
TGAACTAAAACCATAGGATT+AGG - chr2_1:65651469-65651488 Msa0218480:intron 30.0%
! GTTTTATCTTCCTAATCCTA+TGG + chr2_1:65651482-65651501 None:intergenic 30.0%
! ACTAATTTTGTGAATCGTGA+AGG - chr2_1:65651546-65651565 Msa0218480:intron 30.0%
TTGTAGAAGTGAAATCAGAT+GGG - chr2_1:65651569-65651588 Msa0218480:intron 30.0%
AGACAATTATTGAAGTCTAG+TGG - chr2_1:65651619-65651638 Msa0218480:intron 30.0%
GAGCTTATGAAAAGAACATA+TGG + chr2_1:65651868-65651887 None:intergenic 30.0%
AGATATTATACCAGCAAAGA+AGG + chr2_1:65652235-65652254 None:intergenic 30.0%
GGTATTAAGAAATGATAGAG+TGG + chr2_1:65652261-65652280 None:intergenic 30.0%
! TTAGAAGTATAGCATACTCA+CGG + chr2_1:65652549-65652568 None:intergenic 30.0%
GTATGCTATACTTCTAAACT+TGG - chr2_1:65652552-65652571 Msa0218480:intron 30.0%
!! TGTCGTTATTTCTGTGATAA+AGG - chr2_1:65652676-65652695 Msa0218480:intron 30.0%
!! GTCGTTATTTCTGTGATAAA+GGG - chr2_1:65652677-65652696 Msa0218480:intron 30.0%
!! TCGTTATTTCTGTGATAAAG+GGG - chr2_1:65652678-65652697 Msa0218480:intron 30.0%
TACTGGTGAAAAATCAATAG+AGG + chr2_1:65652728-65652747 None:intergenic 30.0%
TACGCTAATTATTGAATCAG+GGG - chr2_1:65652865-65652884 Msa0218480:intron 30.0%
GATATAGCAGAAAATGAGTT+AGG + chr2_1:65652958-65652977 None:intergenic 30.0%
!! TACTGCTATTAAGTTGATTC+AGG + chr2_1:65653077-65653096 None:intergenic 30.0%
TAATCACTGTATTCTCATAG+TGG + chr2_1:65653218-65653237 None:intergenic 30.0%
TTCCTATATACTTTCTCTTC+TGG + chr2_1:65653631-65653650 None:intergenic 30.0%
AAGTATATAGGAACCCAAAA+TGG - chr2_1:65653638-65653657 Msa0218480:intron 30.0%
! CCCAAAATGGTTATGATTTT+TGG - chr2_1:65653651-65653670 Msa0218480:intron 30.0%
! CCCAAAAATCATAACCATTT+TGG + chr2_1:65653655-65653674 None:intergenic 30.0%
CTAACATTTATATGACCAGT+TGG - chr2_1:65653778-65653797 Msa0218480:CDS 30.0%
! GTGTTCTCATTTTGTATGTT+AGG - chr2_1:65653818-65653837 Msa0218480:intron 30.0%
AATTCAACCATGGTAATTAG+GGG + chr2_1:65653909-65653928 None:intergenic 30.0%
! ATTACCATGGTTGAATTTTC+AGG - chr2_1:65653912-65653931 Msa0218480:intron 30.0%
TTATAAATGGCATTTCACGA+TGG - chr2_1:65654237-65654256 Msa0218480:intron 30.0%
!!! CATAGAAGCTATTTTTCATG+TGG - chr2_1:65654353-65654372 Msa0218480:intron 30.0%
!! AAGATTACTTTTACTTTGGG+GGG + chr2_1:65654498-65654517 None:intergenic 30.0%
TTTCTATAGCATATGTCTAG+TGG - chr2_1:65654546-65654565 Msa0218480:intron 30.0%
TATAATCTGTTATGAACCGA+AGG + chr2_1:65654617-65654636 None:intergenic 30.0%
TCGTATTAGCAAACAAACTT+TGG - chr2_1:65654774-65654793 Msa0218480:intron 30.0%
AATACGGAGGATATGTATTA+TGG - chr2_1:65654950-65654969 Msa0218480:CDS 30.0%
ATACGGAGGATATGTATTAT+GGG - chr2_1:65654951-65654970 Msa0218480:CDS 30.0%
! TTCTGGAAAATTATCTCCAA+AGG - chr2_1:65655174-65655193 Msa0218480:intron 30.0%
! TTTGGAATGAGAATAACCTT+TGG + chr2_1:65655193-65655212 None:intergenic 30.0%
TGATACGTAATGCACAAATT+TGG + chr2_1:65655211-65655230 None:intergenic 30.0%
! TAATAGTCAAAGCACTAACA+TGG - chr2_1:65655345-65655364 Msa0218480:intron 30.0%
AAGTAAAGGCTTAAGATTCT+TGG + chr2_1:65655393-65655412 None:intergenic 30.0%
AGAATTGTATCAAGTGATTG+TGG - chr2_1:65655751-65655770 Msa0218480:intron 30.0%
! GAATCACATGATTTGATGAT+AGG - chr2_1:65655789-65655808 Msa0218480:intron 30.0%
! GCTAATCATGGAATTGTTTT+TGG - chr2_1:65655842-65655861 Msa0218480:intron 30.0%
TCCATTGTGAAGTCAAATTA+AGG - chr2_1:65655880-65655899 Msa0218480:intron 30.0%
! TCCTTAATTTGACTTCACAA+TGG + chr2_1:65655884-65655903 None:intergenic 30.0%
AAAGCTAAGCTAATGAACTA+TGG + chr2_1:65656085-65656104 None:intergenic 30.0%
ACAAATTTCTCTTTGCATTG+AGG + chr2_1:65656110-65656129 None:intergenic 30.0%
AAAATATGTACCTGCTACAA+GGG + chr2_1:65656270-65656289 None:intergenic 30.0%
! TTGTAGCAGGTACATATTTT+GGG - chr2_1:65656270-65656289 Msa0218480:intron 30.0%
GTTTGGTTAAAATTATGGGT+GGG + chr2_1:65656334-65656353 None:intergenic 30.0%
AGTTTGGTTAAAATTATGGG+TGG + chr2_1:65656335-65656354 None:intergenic 30.0%
TCACATACCAGTAATTAAAG+TGG - chr2_1:65656408-65656427 Msa0218480:intron 30.0%
TTTGAGTCCACTTTAATTAC+TGG + chr2_1:65656418-65656437 None:intergenic 30.0%
! AATTAAAGTGGACTCAAACT+TGG - chr2_1:65656420-65656439 Msa0218480:intron 30.0%
!! AAATTTGTTAGTGGTTTGGA+TGG - chr2_1:65656451-65656470 Msa0218480:intron 30.0%
!!! AGATTTTAAGAAGTGCTGTA+GGG + chr2_1:65656489-65656508 None:intergenic 30.0%
!!! TAGATTTTAAGAAGTGCTGT+AGG + chr2_1:65656490-65656509 None:intergenic 30.0%
TAACAAATGAACATGTACCT+AGG + chr2_1:65656579-65656598 None:intergenic 30.0%
! ATTTGCTACTACCATCATAA+TGG - chr2_1:65656604-65656623 Msa0218480:intron 30.0%
ACAAAATTCTGCCATTATGA+TGG + chr2_1:65656618-65656637 None:intergenic 30.0%
!! TAGATCTTTAAAGTCCTTCA+TGG + chr2_1:65656656-65656675 None:intergenic 30.0%
! GACTTTAAAGATCTAGAATC+TGG - chr2_1:65656661-65656680 Msa0218480:intron 30.0%
! GTGGGAAAAATATGAACTTT+TGG - chr2_1:65656713-65656732 Msa0218480:intron 30.0%
TAATATTCTCTCAATCTCTC+AGG + chr2_1:65656790-65656809 None:intergenic 30.0%
TTCATGATTTCAGGCATATT+TGG - chr2_1:65656840-65656859 Msa0218480:intron 30.0%
TATTCCATCTATGACTTACT+TGG - chr2_1:65656918-65656937 Msa0218480:intron 30.0%
!! ATGACTTACTTGGTTCTTTT+TGG - chr2_1:65656928-65656947 Msa0218480:intron 30.0%
!! TGGTTCTTTTTGGAAGTTAT+TGG - chr2_1:65656938-65656957 Msa0218480:intron 30.0%
CTGCATTAAATCCACAAATA+TGG + chr2_1:65656985-65657004 None:intergenic 30.0%
! AAAATATTTTCCTTGCTCTG+AGG + chr2_1:65657079-65657098 None:intergenic 30.0%
TCAGACGAAACTTCAAATAT+AGG - chr2_1:65657101-65657120 Msa0218480:intron 30.0%
! ATTTAAAGTAGGCTTTCAAG+TGG - chr2_1:65657358-65657377 Msa0218480:CDS 30.0%
TTAGAAGTAGAGGTCAAAAT+AGG + chr2_1:65657453-65657472 None:intergenic 30.0%
!!! TATTTTGACCTCTACTTCTA+AGG - chr2_1:65657452-65657471 Msa0218480:intron 30.0%
! CTTTTATTCTTATTCCAGAG+AGG - chr2_1:65657688-65657707 Msa0218480:CDS 30.0%
TTTATTCTTATTCCAGAGAG+GGG - chr2_1:65657690-65657709 Msa0218480:CDS 30.0%
!!! TCAATTTTTTACTGCTTCAC+AGG - chr2_1:65657722-65657741 Msa0218480:CDS 30.0%
TTTACATAAGAACTGCATGA+AGG - chr2_1:65657870-65657889 Msa0218480:CDS 30.0%
!! GTATGATCAAGTGGATTTTT+AGG - chr2_1:65657942-65657961 Msa0218480:exon 30.0%
ACCATAATAAAACAGGTATC+TGG - chr2_1:65658047-65658066 Msa0218480:five_prime_UTR 30.0%
! AGGTTTTACCCAACAATTAA+TGG + chr2_1:65658075-65658094 None:intergenic 30.0%
TTCAAACTTTCACAAGAACT+CGG + chr2_1:65658099-65658118 None:intergenic 30.0%
TCTTGTGAAAGTTTGAATGA+TGG - chr2_1:65658102-65658121 Msa0218480:five_prime_UTR 30.0%
TTCATCATCAACAGCTTCAT+CGG + chr2_1:65651250-65651269 None:intergenic 35.0%
!! GCTGTTGATGATGAATCAAA+CGG - chr2_1:65651255-65651274 Msa0218480:intron 35.0%
GTTGTAGAAGTGAAATCAGA+TGG - chr2_1:65651568-65651587 Msa0218480:intron 35.0%
! ATAAGCGCTCAATTAAGTTG+TGG + chr2_1:65651702-65651721 None:intergenic 35.0%
AATAGAAGACTACATGAGGT+AGG + chr2_1:65652016-65652035 None:intergenic 35.0%
TGATGAGCGTTCAATTATTC+AGG - chr2_1:65652151-65652170 Msa0218480:intron 35.0%
AAATTCAATGCCTTCTTTGC+TGG - chr2_1:65652222-65652241 Msa0218480:intron 35.0%
ATACTACAAAGAGCAGTCTA+TGG + chr2_1:65652329-65652348 None:intergenic 35.0%
CAGTCTATCAACTATCATGA+AGG - chr2_1:65652380-65652399 Msa0218480:intron 35.0%
GCAAGGAAATCGAATCATTA+GGG + chr2_1:65652514-65652533 None:intergenic 35.0%
AGCAAGGAAATCGAATCATT+AGG + chr2_1:65652515-65652534 None:intergenic 35.0%
CGATTTCCTTGCTTTGTATT+AGG - chr2_1:65652522-65652541 Msa0218480:intron 35.0%
! TGATTTTTCACCAGTAAAGG+AGG - chr2_1:65652732-65652751 Msa0218480:CDS 35.0%
! GATTTTTCACCAGTAAAGGA+GGG - chr2_1:65652733-65652752 Msa0218480:CDS 35.0%
! TCGATTTCAAATGGCATTGA+TGG + chr2_1:65652816-65652835 None:intergenic 35.0%
! ATCAATGCCATTTGAAATCG+AGG - chr2_1:65652815-65652834 Msa0218480:intron 35.0%
ACGCTAATTATTGAATCAGG+GGG - chr2_1:65652866-65652885 Msa0218480:intron 35.0%
ACTTTACCTTTCCAAACCTT+GGG + chr2_1:65653445-65653464 None:intergenic 35.0%
AACTTTACCTTTCCAAACCT+TGG + chr2_1:65653446-65653465 None:intergenic 35.0%
AAGGTTTGGAAAGGTAAAGT+TGG - chr2_1:65653445-65653464 Msa0218480:intron 35.0%
!!! TTTTAAGGCCACACTTTTCT+TGG + chr2_1:65653596-65653615 None:intergenic 35.0%
! TGCCAGAAGAGAAAGTATAT+AGG - chr2_1:65653626-65653645 Msa0218480:intron 35.0%
!! TAAAGAGGGTATTAACCACA+GGG + chr2_1:65653715-65653734 None:intergenic 35.0%
!! TTAAAGAGGGTATTAACCAC+AGG + chr2_1:65653716-65653735 None:intergenic 35.0%
ATTCAACCATGGTAATTAGG+GGG + chr2_1:65653908-65653927 None:intergenic 35.0%
ACAACCTGAAAATTCAACCA+TGG + chr2_1:65653919-65653938 None:intergenic 35.0%
GCTTTCAAGAATACAACGTT+TGG - chr2_1:65653951-65653970 Msa0218480:CDS 35.0%
AATTTGCCTGTTTGTTCCTA+TGG - chr2_1:65654081-65654100 Msa0218480:intron 35.0%
CAACTACATATCAAAGCCAT+AGG + chr2_1:65654100-65654119 None:intergenic 35.0%
ATGAAAAAGCTGAACTCAAC+TGG - chr2_1:65654520-65654539 Msa0218480:intron 35.0%
TGGTTATTTAAATCAGGGAC+AGG + chr2_1:65654667-65654686 None:intergenic 35.0%
ATATCCTCCGTATTTCATCT+GGG + chr2_1:65654944-65654963 None:intergenic 35.0%
TTTCTCATGATATGTAGAGG+AGG - chr2_1:65655133-65655152 Msa0218480:intron 35.0%
TCCTCAACATGACATAAGAA+AGG + chr2_1:65655322-65655341 None:intergenic 35.0%
TTCTTATGTCATGTTGAGGA+AGG - chr2_1:65655322-65655341 Msa0218480:intron 35.0%
GAGAGCTTTCTGGATATTAA+TGG + chr2_1:65655417-65655436 None:intergenic 35.0%
TCTTAATGCAGATTCCTTTC+AGG + chr2_1:65655457-65655476 None:intergenic 35.0%
ATTCTATAGCTGTCAGTTTG+AGG - chr2_1:65655676-65655695 Msa0218480:intron 35.0%
ATTAAGGAATTAACCCTTCG+TGG - chr2_1:65655896-65655915 Msa0218480:intron 35.0%
ATGGTGTTTGAGTATATGCA+CGG + chr2_1:65656066-65656085 None:intergenic 35.0%
CAAAATATGTACCTGCTACA+AGG + chr2_1:65656271-65656290 None:intergenic 35.0%
! CTTGTAGCAGGTACATATTT+TGG - chr2_1:65656269-65656288 Msa0218480:intron 35.0%
!!! GATTTTAAGAAGTGCTGTAG+GGG + chr2_1:65656488-65656507 None:intergenic 35.0%
GTGCAATGCATGTTATTATC+AGG + chr2_1:65656546-65656565 None:intergenic 35.0%
AGTTCCTTTCGAGATCAAAT+TGG + chr2_1:65656692-65656711 None:intergenic 35.0%
!!! AATATGAACTTTTGGCTCTG+TGG - chr2_1:65656721-65656740 Msa0218480:CDS 35.0%
AGAACCAAGTAAGTCATAGA+TGG + chr2_1:65656925-65656944 None:intergenic 35.0%
! ACCACATCTGGGATTATTAT+TGG - chr2_1:65657020-65657039 Msa0218480:intron 35.0%
ACCAATAATAATCCCAGATG+TGG + chr2_1:65657024-65657043 None:intergenic 35.0%
! ACATCTGGGATTATTATTGG+TGG - chr2_1:65657023-65657042 Msa0218480:intron 35.0%
!! TAGGTAAGTTTGTTACCTTC+TGG - chr2_1:65657120-65657139 Msa0218480:intron 35.0%
TCTATAAACAATTCAGGCTC+AGG - chr2_1:65657402-65657421 Msa0218480:intron 35.0%
AGGTCAAAATAGGTTACGTA+TGG + chr2_1:65657443-65657462 None:intergenic 35.0%
TGACTAAACCTTAGAAGTAG+AGG + chr2_1:65657463-65657482 None:intergenic 35.0%
AAATGAATCAGAATCCCTTC+AGG + chr2_1:65657528-65657547 None:intergenic 35.0%
!! GGGATTCTGATTCATTTTTC+AGG - chr2_1:65657531-65657550 Msa0218480:intron 35.0%
TGTGCACAAAGATCAATCTA+CGG - chr2_1:65657600-65657619 Msa0218480:CDS 35.0%
CAAAGATCAATCTACGGAAA+TGG - chr2_1:65657606-65657625 Msa0218480:CDS 35.0%
! TCAATCTACGGAAATGGATT+TGG - chr2_1:65657612-65657631 Msa0218480:CDS 35.0%
!!! TCACACTGTTTTTAGTGTCA+AGG - chr2_1:65657842-65657861 Msa0218480:CDS 35.0%
!! ATTGGTGTTGTATGATCAAG+TGG - chr2_1:65657933-65657952 Msa0218480:exon 35.0%
!! GCCAGATACCTGTTTTATTA+TGG + chr2_1:65658051-65658070 None:intergenic 35.0%
! TATCTGGCTCCATTAATTGT+TGG - chr2_1:65658063-65658082 Msa0218480:five_prime_UTR 35.0%
! ATCTGGCTCCATTAATTGTT+GGG - chr2_1:65658064-65658083 Msa0218480:five_prime_UTR 35.0%
GTTAAATTCAGAAGTGGCGA+CGG + chr2_1:65650991-65651010 None:intergenic 40.0%
AGAATCGTGGAATTGTGGTT+CGG + chr2_1:65651100-65651119 None:intergenic 40.0%
!! ATGTAACGGAGATTTTGCTC+CGG + chr2_1:65651137-65651156 None:intergenic 40.0%
ATTATTCAGGTCTTCGTCCA+CGG - chr2_1:65652164-65652183 Msa0218480:intron 40.0%
!!! CACACACACCAGTTTTGTTT+CGG - chr2_1:65652459-65652478 Msa0218480:intron 40.0%
!!! ACACACACCAGTTTTGTTTC+GGG - chr2_1:65652460-65652479 Msa0218480:intron 40.0%
GTGTATTCCCGAAACAAAAC+TGG + chr2_1:65652470-65652489 None:intergenic 40.0%
TTAAACCCCAAGAGCAACAA+TGG - chr2_1:65652786-65652805 Msa0218480:intron 40.0%
CAACAGACCTCGATTTCAAA+TGG + chr2_1:65652825-65652844 None:intergenic 40.0%
! CATTTGAAATCGAGGTCTGT+TGG - chr2_1:65652823-65652842 Msa0218480:intron 40.0%
TTAGTGAACCAGACTATGCT+TGG + chr2_1:65652925-65652944 None:intergenic 40.0%
GAGATATGATAGTTAGACCC+AGG - chr2_1:65653169-65653188 Msa0218480:intron 40.0%
! TACTGCTACTCAGTTGTTTC+AGG + chr2_1:65653195-65653214 None:intergenic 40.0%
AAGTATGCATTTATGGCCCA+AGG - chr2_1:65653426-65653445 Msa0218480:intron 40.0%
GTTTGGAAAGGTAAAGTTGG+TGG - chr2_1:65653448-65653467 Msa0218480:intron 40.0%
GGTAACAATTCCATTGCAGA+AGG - chr2_1:65653570-65653589 Msa0218480:intron 40.0%
! TGTGGCCTTAAAAGTAAGTC+AGG - chr2_1:65653603-65653622 Msa0218480:intron 40.0%
!! TGGCACCTGACTTACTTTTA+AGG + chr2_1:65653611-65653630 None:intergenic 40.0%
ATATGACCAGTTGGTTACCA+TGG - chr2_1:65653787-65653806 Msa0218480:CDS 40.0%
TATGACCAGTTGGTTACCAT+GGG - chr2_1:65653788-65653807 Msa0218480:CDS 40.0%
GATGACATTGACAAGCAAGA+TGG + chr2_1:65653852-65653871 None:intergenic 40.0%
CTTGCTTGTCAATGTCATCA+TGG - chr2_1:65653853-65653872 Msa0218480:intron 40.0%
CAAGAATACAACGTTTGGAG+CGG - chr2_1:65653956-65653975 Msa0218480:CDS 40.0%
TCAAAGCCATAGGAACAAAC+AGG + chr2_1:65654090-65654109 None:intergenic 40.0%
ACCTGTACATGAGCAAAAAC+TGG - chr2_1:65654127-65654146 Msa0218480:intron 40.0%
! ACCAGTTTTTGCTCATGTAC+AGG + chr2_1:65654131-65654150 None:intergenic 40.0%
!!! GTAGGCTGATTTTTTGCCTT+CGG - chr2_1:65654598-65654617 Msa0218480:intron 40.0%
AGGATTCAGAGACAGGAAAA+GGG + chr2_1:65654647-65654666 None:intergenic 40.0%
TCAAGAAGAGCTTGAACCTA+GGG + chr2_1:65654712-65654731 None:intergenic 40.0%
TTCTTGAGGCCTTACCAAAT+CGG - chr2_1:65654725-65654744 Msa0218480:intron 40.0%
CCTTACCAAATCGGATAACT+GGG - chr2_1:65654734-65654753 Msa0218480:intron 40.0%
CTTACCAAATCGGATAACTG+GGG - chr2_1:65654735-65654754 Msa0218480:intron 40.0%
ATATCCCCAGTTATCCGATT+TGG + chr2_1:65654742-65654761 None:intergenic 40.0%
CCTAACTCAACCTAGCAATT+TGG + chr2_1:65654873-65654892 None:intergenic 40.0%
! CCAAATTGCTAGGTTGAGTT+AGG - chr2_1:65654870-65654889 Msa0218480:intron 40.0%
CATATCCTCCGTATTTCATC+TGG + chr2_1:65654945-65654964 None:intergenic 40.0%
! TTTTGTGTGCTCATGTGTTG+AGG - chr2_1:65655242-65655261 Msa0218480:intron 40.0%
AACAGTGTTGTATGCCTTCA+CGG - chr2_1:65655296-65655315 Msa0218480:intron 40.0%
GCCTTTCTTATGTCATGTTG+AGG - chr2_1:65655318-65655337 Msa0218480:intron 40.0%
! TAGTCAAAGCACTAACATGG+TGG - chr2_1:65655348-65655367 Msa0218480:CDS 40.0%
ACATGGATAAGAGAGCTTTC+TGG + chr2_1:65655427-65655446 None:intergenic 40.0%
TCCATGTTGCAATACCTGAA+AGG - chr2_1:65655440-65655459 Msa0218480:intron 40.0%
! TCCTTTCAGGTATTGCAACA+TGG + chr2_1:65655444-65655463 None:intergenic 40.0%
TGCAGATGTGAATCTTGTCA+CGG - chr2_1:65655612-65655631 Msa0218480:intron 40.0%
AAAGGCTTCTTGATTCTGCA+AGG - chr2_1:65655643-65655662 Msa0218480:intron 40.0%
AAGGCTTCTTGATTCTGCAA+GGG - chr2_1:65655644-65655663 Msa0218480:intron 40.0%
TCTTGATTCTGCAAGGGAAA+TGG - chr2_1:65655650-65655669 Msa0218480:intron 40.0%
!!! TTCTTTTTTCTCTCTTCGGC+CGG - chr2_1:65655706-65655725 Msa0218480:intron 40.0%
GATTAGCAAAACGCAGCTTT+GGG + chr2_1:65655829-65655848 None:intergenic 40.0%
TGATTAGCAAAACGCAGCTT+TGG + chr2_1:65655830-65655849 None:intergenic 40.0%
! AAGCTGCGTTTTGCTAATCA+TGG - chr2_1:65655830-65655849 Msa0218480:intron 40.0%
!!! TGTTTTTGGACTGTCATCCT+TGG - chr2_1:65655856-65655875 Msa0218480:intron 40.0%
TTGACTTCACAATGGAACCA+AGG + chr2_1:65655876-65655895 None:intergenic 40.0%
TGACAATATGTGACCACGAA+GGG + chr2_1:65655912-65655931 None:intergenic 40.0%
ATGACAATATGTGACCACGA+AGG + chr2_1:65655913-65655932 None:intergenic 40.0%
CACGGAGTTAGATTCTTAGA+TGG + chr2_1:65656048-65656067 None:intergenic 40.0%
TTACTGATGACAGAGAGCTA+TGG + chr2_1:65656139-65656158 None:intergenic 40.0%
!! TAGCAGGTACATATTTTGGG+TGG - chr2_1:65656273-65656292 Msa0218480:intron 40.0%
ATTGCACCATTTAACCACCT+AGG - chr2_1:65656559-65656578 Msa0218480:intron 40.0%
CATGTACCTAGGTGGTTAAA+TGG + chr2_1:65656568-65656587 None:intergenic 40.0%
CAAATGAACATGTACCTAGG+TGG + chr2_1:65656576-65656595 None:intergenic 40.0%
GTTGCCAATTTGATCTCGAA+AGG - chr2_1:65656685-65656704 Msa0218480:intron 40.0%
TTGATCTCGAAAGGAACTTG+TGG - chr2_1:65656694-65656713 Msa0218480:intron 40.0%
TGATCTCGAAAGGAACTTGT+GGG - chr2_1:65656695-65656714 Msa0218480:intron 40.0%
GTTAAATGCACAAGACTGTC+TGG - chr2_1:65656757-65656776 Msa0218480:CDS 40.0%
!!! CATTTTGGTTGACCACATCT+GGG - chr2_1:65657009-65657028 Msa0218480:intron 40.0%
TGTATAACTACCTCAGAGCA+AGG - chr2_1:65657066-65657085 Msa0218480:intron 40.0%
TTAAGAAGAGGAGGATTGCT+GGG + chr2_1:65657154-65657173 None:intergenic 40.0%
ATTAAGAAGAGGAGGATTGC+TGG + chr2_1:65657155-65657174 None:intergenic 40.0%
! AATCAGAATCCCTTCAGGTT+CGG + chr2_1:65657523-65657542 None:intergenic 40.0%
TGCACAATCACTGCATTTGT+GGG + chr2_1:65657586-65657605 None:intergenic 40.0%
ACTGCTTCACAGGTTCATAA+TGG - chr2_1:65657732-65657751 Msa0218480:CDS 40.0%
!! GATCAAGTGGATTTTTAGGG+TGG - chr2_1:65657946-65657965 Msa0218480:exon 40.0%
AACTTTCACAAGAACTCGGT+AGG + chr2_1:65658095-65658114 None:intergenic 40.0%
!! AACGGAACAAGGTTGGTAGT+TGG + chr2_1:65650939-65650958 None:intergenic 45.0%
AAAGGTTGGAAGCGAAAGTG+AGG + chr2_1:65651039-65651058 None:intergenic 45.0%
GTGAGAGAATCGTGGAATTG+TGG + chr2_1:65651105-65651124 None:intergenic 45.0%
GAAGAAGAGTGAGAGAATCG+TGG + chr2_1:65651113-65651132 None:intergenic 45.0%
ATTCTCTCACTCTTCTTCGC+CGG - chr2_1:65651115-65651134 Msa0218480:three_prime_UTR 45.0%
GTGGATCTACTGCATTTCAC+CGG + chr2_1:65651177-65651196 None:intergenic 45.0%
GGTGAAATGCAGTAGATCCA+CGG - chr2_1:65651176-65651195 Msa0218480:three_prime_UTR 45.0%
CTTCTTCAATAGAGTCTCCG+AGG - chr2_1:65651295-65651314 Msa0218480:intron 45.0%
TAGAGAATCTCCAGAAGAGG+TGG + chr2_1:65651328-65651347 None:intergenic 45.0%
CGATAGAGAATCTCCAGAAG+AGG + chr2_1:65651331-65651350 None:intergenic 45.0%
TCTGGAGATTCTCTATCGCT+CGG - chr2_1:65651333-65651352 Msa0218480:three_prime_UTR 45.0%
CTACATGAGGTAGGTGCTAA+TGG + chr2_1:65652007-65652026 None:intergenic 45.0%
TTATTCAGGTCTTCGTCCAC+GGG - chr2_1:65652165-65652184 Msa0218480:intron 45.0%
AAAACTGGTGTGTGTGCATG+TGG + chr2_1:65652455-65652474 None:intergenic 45.0%
CACGGACCTAATACAAAGCA+AGG + chr2_1:65652531-65652550 None:intergenic 45.0%
AAAAGCTTGCCCTCCTTTAC+TGG + chr2_1:65652745-65652764 None:intergenic 45.0%
!! TTCTAGAGTCATTGCTGCCT+CGG - chr2_1:65652763-65652782 Msa0218480:intron 45.0%
TCCAACTTCCAAGCATAGTC+TGG - chr2_1:65652914-65652933 Msa0218480:intron 45.0%
ACCAGACTATGCTTGGAAGT+TGG + chr2_1:65652918-65652937 None:intergenic 45.0%
! TACTCAGTTGTTTCAGGCCT+GGG + chr2_1:65653189-65653208 None:intergenic 45.0%
TGCATTTATGGCCCAAGGTT+TGG - chr2_1:65653431-65653450 Msa0218480:intron 45.0%
TTATGGCCCAAGGTTTGGAA+AGG - chr2_1:65653436-65653455 Msa0218480:intron 45.0%
AGTGTAAAAGACGACGCAGA+AGG - chr2_1:65653537-65653556 Msa0218480:intron 45.0%
GACGCAGAAGGATCTAAAGA+TGG - chr2_1:65653549-65653568 Msa0218480:intron 45.0%
!! CTTTTCTTGGCCTTCTGCAA+TGG + chr2_1:65653583-65653602 None:intergenic 45.0%
TTACACCCATGGTAACCAAC+TGG + chr2_1:65653796-65653815 None:intergenic 45.0%
TGAGAACACAGTTACACCCA+TGG + chr2_1:65653807-65653826 None:intergenic 45.0%
ATGGTAATTAGGGGGAAGAG+TGG + chr2_1:65653900-65653919 None:intergenic 45.0%
ACTCTTCCCCCTAATTACCA+TGG - chr2_1:65653899-65653918 Msa0218480:intron 45.0%
CTTAGAACCTCGTGTGAGTA+TGG - chr2_1:65653990-65654009 Msa0218480:CDS 45.0%
TGTGTTTCCATACTCACACG+AGG + chr2_1:65654000-65654019 None:intergenic 45.0%
CAGGATTCAGAGACAGGAAA+AGG + chr2_1:65654648-65654667 None:intergenic 45.0%
CTCAAGAAGAGCTTGAACCT+AGG + chr2_1:65654713-65654732 None:intergenic 45.0%
CTAGGTTCAAGCTCTTCTTG+AGG - chr2_1:65654711-65654730 Msa0218480:intron 45.0%
GCCTTACCAAATCGGATAAC+TGG - chr2_1:65654733-65654752 Msa0218480:intron 45.0%
!! CCCAGTTATCCGATTTGGTA+AGG + chr2_1:65654737-65654756 None:intergenic 45.0%
TCGGATAACTGGGGATATAC+TGG - chr2_1:65654744-65654763 Msa0218480:intron 45.0%
ACCTAGCAATTTGGCAGGAA+GGG + chr2_1:65654864-65654883 None:intergenic 45.0%
AACCTAGCAATTTGGCAGGA+AGG + chr2_1:65654865-65654884 None:intergenic 45.0%
ACTCAACCTAGCAATTTGGC+AGG + chr2_1:65654869-65654888 None:intergenic 45.0%
! CTAGGTTGAGTTAGGCTCAA+GGG - chr2_1:65654878-65654897 Msa0218480:intron 45.0%
TGGAGGACCCAGATGAAATA+CGG - chr2_1:65654934-65654953 Msa0218480:intron 45.0%
GCACTGAGCATTCCACATTA+TGG + chr2_1:65655004-65655023 None:intergenic 45.0%
TCAGCAACCTGCTTGTCTAA+AGG + chr2_1:65655026-65655045 None:intergenic 45.0%
TTTAGACAAGCAGGTTGCTG+AGG - chr2_1:65655025-65655044 Msa0218480:intron 45.0%
TTAGACAAGCAGGTTGCTGA+GGG - chr2_1:65655026-65655045 Msa0218480:intron 45.0%
GAGGGTAAGCTGTGAAATAC+TGG - chr2_1:65655044-65655063 Msa0218480:intron 45.0%
CTCATGATATGTAGAGGAGG+AGG - chr2_1:65655136-65655155 Msa0218480:intron 45.0%
ATGATATGTAGAGGAGGAGG+AGG - chr2_1:65655139-65655158 Msa0218480:intron 45.0%
GGAGGAAATTGAGATGCTTC+TGG - chr2_1:65655157-65655176 Msa0218480:intron 45.0%
TGACATAAGAAAGGCCGTGA+AGG + chr2_1:65655313-65655332 None:intergenic 45.0%
!!! TCTTTTTTCTCTCTTCGGCC+GGG - chr2_1:65655707-65655726 Msa0218480:intron 45.0%
TGGTTCCATTCAACAGCTCA+CGG - chr2_1:65656180-65656199 Msa0218480:CDS 45.0%
GAACCTGAAGTCCTATCTTG+AGG - chr2_1:65656866-65656885 Msa0218480:intron 45.0%
GTTCCTCAAGATAGGACTTC+AGG + chr2_1:65656872-65656891 None:intergenic 45.0%
!!! GCATTTTGGTTGACCACATC+TGG - chr2_1:65657008-65657027 Msa0218480:intron 45.0%
TAAGAAGAGGAGGATTGCTG+GGG + chr2_1:65657153-65657172 None:intergenic 45.0%
ATTAAGTGCTCCGAACCTGA+AGG - chr2_1:65657510-65657529 Msa0218480:intron 45.0%
TTAAGTGCTCCGAACCTGAA+GGG - chr2_1:65657511-65657530 Msa0218480:intron 45.0%
GTGCACAATCACTGCATTTG+TGG + chr2_1:65657587-65657606 None:intergenic 45.0%
TGAATCTGTTTACCCCTCTC+TGG + chr2_1:65657705-65657724 None:intergenic 45.0%
!!! TTTTTATTATTATTATTTGA+TGG + chr2_1:65650863-65650882 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTAAAGA+GGG + chr2_1:65653729-65653748 None:intergenic 5.0%
TACCAACCTTGTTCCGTTCC+CGG - chr2_1:65650941-65650960 Msa0218480:three_prime_UTR 50.0%
!! TTACGGTGGTTTTGCATGCC+GGG + chr2_1:65650962-65650981 None:intergenic 50.0%
!! GTTACGGTGGTTTTGCATGC+CGG + chr2_1:65650963-65650982 None:intergenic 50.0%
AAATTCAGAAGTGGCGACGG+TGG + chr2_1:65650988-65651007 None:intergenic 50.0%
GTCGGAGAAGAAGAGGTAGT+TGG + chr2_1:65651073-65651092 None:intergenic 50.0%
!! GAATTGTGGTTCGGTGAGGT+CGG + chr2_1:65651091-65651110 None:intergenic 50.0%
TTCATCGGAATCAGACGCGA+CGG + chr2_1:65651235-65651254 None:intergenic 50.0%
GAAGAGGTGGTTGCAATCCT+CGG + chr2_1:65651315-65651334 None:intergenic 50.0%
AGGATTGCAACCACCTCTTC+TGG - chr2_1:65651315-65651334 Msa0218480:intron 50.0%
TTGCTCTTGGGGTTTAACCG+AGG + chr2_1:65652783-65652802 None:intergenic 50.0%
AACCCCAAGAGCAACAATGG+AGG - chr2_1:65652789-65652808 Msa0218480:intron 50.0%
ACCCCAAGAGCAACAATGGA+GGG - chr2_1:65652790-65652809 Msa0218480:intron 50.0%
! CTACTCAGTTGTTTCAGGCC+TGG + chr2_1:65653190-65653209 None:intergenic 50.0%
GCAGAAGGCCAAGAAAAGTG+TGG - chr2_1:65653585-65653604 Msa0218480:intron 50.0%
TGTCGGCATGAAGAAGTAGC+AGG + chr2_1:65654196-65654215 None:intergenic 50.0%
CCTAGCAATTTGGCAGGAAG+GGG + chr2_1:65654863-65654882 None:intergenic 50.0%
! GCTAGGTTGAGTTAGGCTCA+AGG - chr2_1:65654877-65654896 Msa0218480:intron 50.0%
! GCAGATGCTGCTTGATCTTC+TGG - chr2_1:65654914-65654933 Msa0218480:intron 50.0%
! GATGCTGCTTGATCTTCTGG+AGG - chr2_1:65654917-65654936 Msa0218480:intron 50.0%
AGGACCCAGATGAAATACGG+AGG - chr2_1:65654937-65654956 Msa0218480:intron 50.0%
CTCAGTGCCTTTAGACAAGC+AGG - chr2_1:65655016-65655035 Msa0218480:intron 50.0%
CTTGTCACGGTCAAGCTGAA+AGG - chr2_1:65655625-65655644 Msa0218480:intron 50.0%
!!! CTTTTTTCTCTCTTCGGCCG+GGG - chr2_1:65655708-65655727 Msa0218480:intron 50.0%
!!! TTTTTTCTCTCTTCGGCCGG+GGG - chr2_1:65655709-65655728 Msa0218480:intron 50.0%
TTCCATTCAACAGCTCACGG+AGG - chr2_1:65656183-65656202 Msa0218480:CDS 50.0%
ACGGAGGCTTGAAGTTAGCA+GGG - chr2_1:65656199-65656218 Msa0218480:intron 50.0%
CCACACAGAATGTTCCAACC+TGG + chr2_1:65656238-65656257 None:intergenic 50.0%
! CCAGGTTGGAACATTCTGTG+TGG - chr2_1:65656235-65656254 Msa0218480:intron 50.0%
GGAACATTCTGTGTGGCAGT+TGG - chr2_1:65656242-65656261 Msa0218480:intron 50.0%
GTCCTATCTTGAGGAACGTG+TGG - chr2_1:65656875-65656894 Msa0218480:intron 50.0%
CACCACACGTTCCTCAAGAT+AGG + chr2_1:65656880-65656899 None:intergenic 50.0%
ACGTATGGCAGAGCTTATCG+AGG + chr2_1:65657428-65657447 None:intergenic 50.0%
CCTAGCGAAGAGTCTCTTGA+TGG + chr2_1:65657776-65657795 None:intergenic 50.0%
CCATCAAGAGACTCTTCGCT+AGG - chr2_1:65657773-65657792 Msa0218480:CDS 50.0%
! TCGCTAGGTTGTTGCTTGTG+TGG - chr2_1:65657788-65657807 Msa0218480:CDS 50.0%
! CGCTAGGTTGTTGCTTGTGT+GGG - chr2_1:65657789-65657808 Msa0218480:CDS 50.0%
!! GTGGTTTTGCATGCCGGGAA+CGG + chr2_1:65650957-65650976 None:intergenic 55.0%
! TAGTTGGTGCGCGTGAGGAA+AGG + chr2_1:65651057-65651076 None:intergenic 55.0%
!! CGTGGAATTGTGGTTCGGTG+AGG + chr2_1:65651095-65651114 None:intergenic 55.0%
GAGCGCAGGCGATGATGTAA+CGG + chr2_1:65651151-65651170 None:intergenic 55.0%
GATCCACGGAAGAAAAGCCG+TGG - chr2_1:65651190-65651209 Msa0218480:three_prime_UTR 55.0%
! GTTCCACGGCTTTTCTTCCG+TGG + chr2_1:65651196-65651215 None:intergenic 55.0%
TCGGTTTCAGCGTCGTTCCA+CGG + chr2_1:65651210-65651229 None:intergenic 55.0%
GGAATCAGACGCGACGGTTT+CGG + chr2_1:65651229-65651248 None:intergenic 55.0%
TCCACGGGACGTTAGAAGTG+TGG - chr2_1:65652180-65652199 Msa0218480:intron 55.0%
TCCACACTTCTAACGTCCCG+TGG + chr2_1:65652184-65652203 None:intergenic 55.0%
GCCCTCCATTGTTGCTCTTG+GGG + chr2_1:65652794-65652813 None:intergenic 55.0%
GGCCCTCCATTGTTGCTCTT+GGG + chr2_1:65652795-65652814 None:intergenic 55.0%
TGGCCCTCCATTGTTGCTCT+TGG + chr2_1:65652796-65652815 None:intergenic 55.0%
GGTGTAAGTCTCGTTCCCTG+TGG - chr2_1:65653697-65653716 Msa0218480:intron 55.0%
! ACGTTTGGAGCGGAGACTGA+TGG - chr2_1:65653966-65653985 Msa0218480:CDS 55.0%
CAGGGACAGGATTCAGAGAC+AGG + chr2_1:65654654-65654673 None:intergenic 55.0%
AGAGCTTGAACCTAGGGCCA+GGG + chr2_1:65654706-65654725 None:intergenic 55.0%
AAGAGCTTGAACCTAGGGCC+AGG + chr2_1:65654707-65654726 None:intergenic 55.0%
CCCCTTCCTGCCAAATTGCT+AGG - chr2_1:65654860-65654879 Msa0218480:intron 55.0%
GTTGAGTTAGGCTCAAGGGC+AGG - chr2_1:65654882-65654901 Msa0218480:intron 55.0%
! TTTTTCTCTCTTCGGCCGGG+GGG - chr2_1:65655710-65655729 Msa0218480:intron 55.0%
AGCCTCCGTGAGCTGTTGAA+TGG + chr2_1:65656188-65656207 None:intergenic 55.0%
CACGGAGGCTTGAAGTTAGC+AGG - chr2_1:65656198-65656217 Msa0218480:intron 55.0%
GAGGCTTGAAGTTAGCAGGG+TGG - chr2_1:65656202-65656221 Msa0218480:intron 55.0%
GTGGAACTGCTTCTCCAGGT+TGG - chr2_1:65656221-65656240 Msa0218480:intron 55.0%
AGGAGGATTGCTGGGGAAAC+AGG + chr2_1:65657146-65657165 None:intergenic 55.0%
ATCCATGCACTGCGTGACTC+TGG + chr2_1:65657984-65658003 None:intergenic 55.0%
GAGTCACGCAGTGCATGGAT+CGG - chr2_1:65657984-65658003 Msa0218480:five_prime_UTR 55.0%
TGCCGGGAACGGAACAAGGT+TGG + chr2_1:65650946-65650965 None:intergenic 60.0%
TGCATGCCGGGAACGGAACA+AGG + chr2_1:65650950-65650969 None:intergenic 60.0%
AGTGGCGACGGTGGAGGTTA+CGG + chr2_1:65650979-65650998 None:intergenic 60.0%
TTCAGAAGTGGCGACGGTGG+AGG + chr2_1:65650985-65651004 None:intergenic 60.0%
TGGTGCGCGTGAGGAAAGGT+TGG + chr2_1:65651053-65651072 None:intergenic 60.0%
! AGAGGTAGTTGGTGCGCGTG+AGG + chr2_1:65651062-65651081 None:intergenic 60.0%
CGGTGAGGTCGGAGAAGAAG+AGG + chr2_1:65651080-65651099 None:intergenic 60.0%
ATCATCGCCTGCGCTCAAGC+CGG - chr2_1:65651155-65651174 Msa0218480:three_prime_UTR 60.0%
!! CATTTCACCGGCTTGAGCGC+AGG + chr2_1:65651165-65651184 None:intergenic 60.0%
AGGGGGTAGGGGGAGAGAAA+TGG + chr2_1:65654687-65654706 None:intergenic 60.0%
ATTTCTCTCCCCCTACCCCC+TGG - chr2_1:65654686-65654705 Msa0218480:intron 60.0%
AGCTTGAACCTAGGGCCAGG+GGG + chr2_1:65654704-65654723 None:intergenic 60.0%
GAGCTTGAACCTAGGGCCAG+GGG + chr2_1:65654705-65654724 None:intergenic 60.0%
! TTTTCTCTCTTCGGCCGGGG+GGG - chr2_1:65655711-65655730 Msa0218480:intron 60.0%
CAGGGTGGAACTGCTTCTCC+AGG - chr2_1:65656217-65656236 Msa0218480:intron 60.0%
! GCAGTTGGTGCCCTTGTAGC+AGG - chr2_1:65656257-65656276 Msa0218480:intron 60.0%
TGCTGGGGAAACAGGCCAGA+AGG + chr2_1:65657138-65657157 None:intergenic 60.0%
GTCCAGAGTCACGCAGTGCA+TGG - chr2_1:65657979-65657998 Msa0218480:five_prime_UTR 60.0%
AACCTAGGGCCAGGGGGTAG+GGG + chr2_1:65654698-65654717 None:intergenic 65.0%
GAACCTAGGGCCAGGGGGTA+GGG + chr2_1:65654699-65654718 None:intergenic 65.0%
TGAACCTAGGGCCAGGGGGT+AGG + chr2_1:65654700-65654719 None:intergenic 65.0%
GCTCAAGGGCAGGAGCTCTG+AGG - chr2_1:65654892-65654911 Msa0218480:intron 65.0%
TTTCTCTCTTCGGCCGGGGG+GGG - chr2_1:65655712-65655731 Msa0218480:intron 65.0%
GGCGACGGTGGAGGTTACGG+TGG + chr2_1:65650976-65650995 None:intergenic 70.0%
ACCTAGGGCCAGGGGGTAGG+GGG + chr2_1:65654697-65654716 None:intergenic 70.0%
TTCTCTCTTCGGCCGGGGGG+GGG - chr2_1:65655713-65655732 Msa0218480:intron 70.0%
TCCCCCTACCCCCTGGCCCT+AGG - chr2_1:65654693-65654712 Msa0218480:intron 75.0%
TCTCTCTTCGGCCGGGGGGG+GGG - chr2_1:65655714-65655733 Msa0218480:intron 75.0%
! CTCTCTTCGGCCGGGGGGGG+GGG - chr2_1:65655715-65655734 Msa0218480:intron 80.0%
! TCTCTTCGGCCGGGGGGGGG+GGG - chr2_1:65655716-65655735 Msa0218480:intron 80.0%
! CTCTTCGGCCGGGGGGGGGG+GGG - chr2_1:65655717-65655736 Msa0218480:intron 85.0%
! TCTTCGGCCGGGGGGGGGGG+GGG - chr2_1:65655718-65655737 Msa0218480:intron 85.0%
! CTTCGGCCGGGGGGGGGGGG+GGG - chr2_1:65655719-65655738 Msa0218480:intron 90.0%
! TTCGGCCGGGGGGGGGGGGG+GGG - chr2_1:65655720-65655739 Msa0218480:intron 90.0%
! TCGGCCGGGGGGGGGGGGGG+GGG - chr2_1:65655721-65655740 Msa0218480:intron 95.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 65650815 65658147 65650815 ID=Msa0218480;Name=Msa0218480
chr2_1 mRNA 65650815 65658147 65650815 ID=Msa0218480-mRNA-1;Parent=Msa0218480;Name=Msa0218480-mRNA-1;_AED=0.13;_eAED=0.13;_QI=200|0.86|0.93|0.93|0.86|0.87|16|510|483
chr2_1 exon 65650815 65651218 65650815 ID=Msa0218480-mRNA-1:exon:18365;Parent=Msa0218480-mRNA-1
chr2_1 exon 65651326 65651409 65651326 ID=Msa0218480-mRNA-1:exon:18364;Parent=Msa0218480-mRNA-1
chr2_1 exon 65651840 65651957 65651840 ID=Msa0218480-mRNA-1:exon:18363;Parent=Msa0218480-mRNA-1
chr2_1 exon 65652066 65652109 65652066 ID=Msa0218480-mRNA-1:exon:18362;Parent=Msa0218480-mRNA-1
chr2_1 exon 65652684 65652766 65652684 ID=Msa0218480-mRNA-1:exon:18361;Parent=Msa0218480-mRNA-1
chr2_1 exon 65653265 65653345 65653265 ID=Msa0218480-mRNA-1:exon:18360;Parent=Msa0218480-mRNA-1
chr2_1 exon 65653767 65653812 65653767 ID=Msa0218480-mRNA-1:exon:18359;Parent=Msa0218480-mRNA-1
chr2_1 exon 65653915 65654080 65653915 ID=Msa0218480-mRNA-1:exon:18358;Parent=Msa0218480-mRNA-1
chr2_1 exon 65654167 65654247 65654167 ID=Msa0218480-mRNA-1:exon:18357;Parent=Msa0218480-mRNA-1
chr2_1 exon 65654943 65655028 65654943 ID=Msa0218480-mRNA-1:exon:18356;Parent=Msa0218480-mRNA-1
chr2_1 exon 65655347 65655431 65655347 ID=Msa0218480-mRNA-1:exon:18355;Parent=Msa0218480-mRNA-1
chr2_1 exon 65656126 65656216 65656126 ID=Msa0218480-mRNA-1:exon:18354;Parent=Msa0218480-mRNA-1
chr2_1 exon 65656333 65656418 65656333 ID=Msa0218480-mRNA-1:exon:18353;Parent=Msa0218480-mRNA-1
chr2_1 exon 65656719 65656789 65656719 ID=Msa0218480-mRNA-1:exon:18352;Parent=Msa0218480-mRNA-1
chr2_1 exon 65657322 65657394 65657322 ID=Msa0218480-mRNA-1:exon:18351;Parent=Msa0218480-mRNA-1
chr2_1 exon 65657585 65658147 65657585 ID=Msa0218480-mRNA-1:exon:18350;Parent=Msa0218480-mRNA-1
chr2_1 five_prime_UTR 65657948 65658147 65657948 ID=Msa0218480-mRNA-1:five_prime_utr;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65657585 65657947 65657585 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65657322 65657394 65657322 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65656719 65656789 65656719 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65656333 65656418 65656333 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65656126 65656216 65656126 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65655347 65655431 65655347 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65654943 65655028 65654943 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65654167 65654247 65654167 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65653915 65654080 65653915 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65653767 65653812 65653767 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65653265 65653345 65653265 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65652684 65652766 65652684 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65652066 65652109 65652066 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 CDS 65651862 65651957 65651862 ID=Msa0218480-mRNA-1:cds;Parent=Msa0218480-mRNA-1
chr2_1 three_prime_UTR 65651840 65651861 65651840 ID=Msa0218480-mRNA-1:three_prime_utr;Parent=Msa0218480-mRNA-1
chr2_1 three_prime_UTR 65651326 65651409 65651326 ID=Msa0218480-mRNA-1:three_prime_utr;Parent=Msa0218480-mRNA-1
chr2_1 three_prime_UTR 65650815 65651218 65650815 ID=Msa0218480-mRNA-1:three_prime_utr;Parent=Msa0218480-mRNA-1
Gene Sequence

>Msa0218480

ATGGCTTTAACTCTAACTTCTCCTCACTTTCGCTTCCAACCTTTCCTCACGCGCACCAACTACCTCTTCTTCTCCGACCTCACCGAACCACAATTCCACGATTCTCTCACTCTTCTTCGCCGGAGCAAAATCTCCGTTACATCATCGCCTGCGCTCAAGCCGGTGAAATGCAGTAGATCCACGGAAGAAAAGCCGTGGAACGACGCTGAAACCGAAACCGTCGCGTCTGATTCCGATGAAGCTGTTGATGATGAATCAAACGGTCAAGCTCCGAGCAAAACTTCTTCAATAGAGTCTCCGAGGATTGCAACCACCTCTTCTGGAGATTCTCTATCGCTCGGAATTCGTGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGATGGGACAGTATCGACTAGAAAAATCAATAGAAGACAATTATTGAAGTCTAGTGGTCTTCGTCCACGGGACGTTAGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAACTTGGGTTCACTACGAGCAATCGCAATGCAAGATTGTGTACTTATATTTGATTATAATCGTAAAGGAGGGCAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTAAACCCCAAGAGCAACAATGGAGGGCCATCAATGCCATTTGAAATCGAGTGCTTAAGTGTAAAAGACGACGCAGAAGGATCTAAAGATGGTAACAATTCCATTGCAGAAGGCCAAGAAAAGTGTGGCCTTAAAAGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCTCGTGTGAGTATGGAAACACAGTTCAAGCTCTTCTTGAGGCCTTACCAAATCGGATAACTGGGGATATACTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCAAGGGCAGGAGCTCTGAGGCAGATGCTGCTTGATCTTCTGGAGGACCCAGATGAAATACGGAGGATATGTATTATGGGAAGAAATTGTACAATAAATAAAGGAAACCATAATGTGGAATGCTCAGTGCCTTTAGACAAGCAGGTTGCTGAGGAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCACGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGCTCACGGAGGCTTGAAGTTAGCAGGGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGCATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACGTGTGTTTGCATTTTGGTTGACCACATCTGGGATTATTATTGGTGGCATTGTTGTTTTTTTTATTATGTATAACTACCTCAGAGCAAGGAAAATATTTTGA
Protein sequence

>Msa0218480

MALTLTSPHFRFQPFLTRTNYLFFSDLTEPQFHDSLTLLRRSKISVTSSPALKPVKCSRSTEEKPWNDAETETVASDSDEAVDDESNGQAPSKTSSIESPRIATTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLESLLPRLNPKSNNGGPSMPFEIECLSVKDDAEGSKDGNNSIAEGQEKCGLKSCRSSIAFKNTTFGAETDGLRTSCEYGNTVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPDEIRRICIMGRNCTINKGNHNVECSVPLDKQVAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEERVFAFWLTTSGIIIGGIVVFFIMYNYLRARKIF*