Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515930 | XP_013461377.1 | 98.421 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 0.0 | 777 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515930 | sp|P12886|ADH1_PEA | 96.053 | 380 | 15 | 0 | 1 | 380 | 1 | 380 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515930 | A0A072V0U2 | 98.421 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 0.0 | 777 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000180 | Msa0515930 | -0.812159 | 4.878389e-51 | -8.615850e-47 |
| Msa0012810 | Msa0515930 | 0.824743 | 6.841957e-54 | -8.615850e-47 |
| Msa0030400 | Msa0515930 | -0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0031580 | Msa0515930 | 0.809906 | 1.501020e-50 | -8.615850e-47 |
| Msa0034100 | Msa0515930 | -0.823925 | 1.065023e-53 | -8.615850e-47 |
| Msa0036550 | Msa0515930 | 0.833732 | 4.504903e-56 | -8.615850e-47 |
| Msa0036560 | Msa0515930 | -0.804722 | 1.884278e-49 | -8.615850e-47 |
| Msa0036580 | Msa0515930 | 0.824980 | 6.016227e-54 | -8.615850e-47 |
| Msa0044250 | Msa0515930 | -0.817315 | 3.515583e-52 | -8.615850e-47 |
| Msa0044320 | Msa0515930 | -0.812939 | 3.293461e-51 | -8.615850e-47 |
| Msa0045660 | Msa0515930 | -0.811893 | 5.575683e-51 | -8.615850e-47 |
| Msa0046430 | Msa0515930 | 0.823770 | 1.157969e-53 | -8.615850e-47 |
| Msa0051600 | Msa0515930 | -0.805371 | 1.378698e-49 | -8.615850e-47 |
| Msa0054760 | Msa0515930 | -0.816379 | 5.701486e-52 | -8.615850e-47 |
| Msa0059880 | Msa0515930 | 0.808996 | 2.353386e-50 | -8.615850e-47 |
| Msa0061600 | Msa0515930 | 0.805486 | 1.304495e-49 | -8.615850e-47 |
| Msa0064960 | Msa0515930 | 0.820273 | 7.482801e-53 | -8.615850e-47 |
| Msa0072910 | Msa0515930 | -0.801385 | 9.230508e-49 | -8.615850e-47 |
| Msa0078990 | Msa0515930 | 0.801682 | 8.023618e-49 | -8.615850e-47 |
| Msa0081290 | Msa0515930 | -0.805588 | 1.241773e-49 | -8.615850e-47 |
| Msa0084390 | Msa0515930 | 0.811695 | 6.156678e-51 | -8.615850e-47 |
| Msa0085710 | Msa0515930 | 0.801195 | 1.009534e-48 | -8.615850e-47 |
| Msa0089010 | Msa0515930 | -0.807982 | 3.874075e-50 | -8.615850e-47 |
| Msa0096860 | Msa0515930 | 0.811460 | 6.924880e-51 | -8.615850e-47 |
| Msa0110240 | Msa0515930 | 0.817467 | 3.248365e-52 | -8.615850e-47 |
| Msa0116200 | Msa0515930 | -0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa0121080 | Msa0515930 | -0.821643 | 3.620351e-53 | -8.615850e-47 |
| Msa0127060 | Msa0515930 | -0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0128110 | Msa0515930 | -0.825281 | 5.107332e-54 | -8.615850e-47 |
| Msa0128340 | Msa0515930 | 0.844951 | 5.498504e-59 | -8.615850e-47 |
| Msa0128740 | Msa0515930 | 0.842493 | 2.500622e-58 | -8.615850e-47 |
| Msa0129270 | Msa0515930 | 0.826297 | 2.930939e-54 | -8.615850e-47 |
| Msa0130710 | Msa0515930 | 0.814069 | 1.858674e-51 | -8.615850e-47 |
| Msa0131800 | Msa0515930 | 0.805257 | 1.456448e-49 | -8.615850e-47 |
| Msa0137760 | Msa0515930 | 0.809970 | 1.454288e-50 | -8.615850e-47 |
| Msa0139270 | Msa0515930 | 0.821254 | 4.451955e-53 | -8.615850e-47 |
| Msa0139850 | Msa0515930 | 0.806836 | 6.779911e-50 | -8.615850e-47 |
| Msa0147800 | Msa0515930 | -0.804754 | 1.855921e-49 | -8.615850e-47 |
| Msa0150910 | Msa0515930 | 0.803353 | 3.629583e-49 | -8.615850e-47 |
| Msa0164630 | Msa0515930 | -0.808626 | 2.823132e-50 | -8.615850e-47 |
| Msa0171510 | Msa0515930 | 0.800681 | 1.285717e-48 | -8.615850e-47 |
| Msa0173260 | Msa0515930 | 0.837767 | 4.280362e-57 | -8.615850e-47 |
| Msa0174590 | Msa0515930 | 0.821297 | 4.351534e-53 | -8.615850e-47 |
| Msa0176600 | Msa0515930 | 0.832209 | 1.077084e-55 | -8.615850e-47 |
| Msa0176610 | Msa0515930 | -0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0176620 | Msa0515930 | 0.822569 | 2.208467e-53 | -8.615850e-47 |
| Msa0182840 | Msa0515930 | 0.815601 | 8.501779e-52 | -8.615850e-47 |
| Msa0192890 | Msa0515930 | 0.811231 | 7.762704e-51 | -8.615850e-47 |
| Msa0199740 | Msa0515930 | -0.803388 | 3.570330e-49 | -8.615850e-47 |
| Msa0222720 | Msa0515930 | -0.808019 | 3.803834e-50 | -8.615850e-47 |
| Msa0223050 | Msa0515930 | 0.803151 | 3.997832e-49 | -8.615850e-47 |
| Msa0225910 | Msa0515930 | 0.806218 | 9.150987e-50 | -8.615850e-47 |
| Msa0234120 | Msa0515930 | 0.815000 | 1.156814e-51 | -8.615850e-47 |
| Msa0235020 | Msa0515930 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0238420 | Msa0515930 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0375500 | Msa0515930 | 0.954623 | 1.948182e-112 | -8.615850e-47 |
| Msa0375550 | Msa0515930 | 0.909390 | 6.008206e-82 | -8.615850e-47 |
| Msa0421100 | Msa0515930 | -0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0424240 | Msa0515930 | 0.863489 | 2.400864e-64 | -8.615850e-47 |
| Msa0424300 | Msa0515930 | 0.998406 | 3.868731e-264 | -8.615850e-47 |
| Msa0434890 | Msa0515930 | 0.811437 | 7.003350e-51 | -8.615850e-47 |
| Msa0438440 | Msa0515930 | -0.803027 | 4.239866e-49 | -8.615850e-47 |
| Msa0471210 | Msa0515930 | 0.962721 | 3.237033e-121 | -8.615850e-47 |
| Msa0476820 | Msa0515930 | -0.800306 | 1.533553e-48 | -8.615850e-47 |
| Msa0478400 | Msa0515930 | 0.863252 | 2.842606e-64 | -8.615850e-47 |
| Msa0239610 | Msa0515930 | -0.813906 | 2.018731e-51 | -8.615850e-47 |
| Msa0264020 | Msa0515930 | -0.802567 | 5.277015e-49 | -8.615850e-47 |
| Msa0266640 | Msa0515930 | 0.823876 | 1.093783e-53 | -8.615850e-47 |
| Msa0267710 | Msa0515930 | 0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0269430 | Msa0515930 | -0.812236 | 4.691822e-51 | -8.615850e-47 |
| Msa0273420 | Msa0515930 | 0.817801 | 2.731668e-52 | -8.615850e-47 |
| Msa0275570 | Msa0515930 | 0.819955 | 8.847349e-53 | -8.615850e-47 |
| Msa0297320 | Msa0515930 | -0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa0302220 | Msa0515930 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0313680 | Msa0515930 | 0.805294 | 1.430758e-49 | -8.615850e-47 |
| Msa0315010 | Msa0515930 | -0.825833 | 3.778201e-54 | -8.615850e-47 |
| Msa0318370 | Msa0515930 | 0.804724 | 1.882950e-49 | -8.615850e-47 |
| Msa0339540 | Msa0515930 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0512430 | Msa0515930 | -0.814491 | 1.499930e-51 | -8.615850e-47 |
| Msa0515930 | Msa0521100 | -0.800455 | 1.429478e-48 | -8.615850e-47 |
| Msa0515930 | Msa0533510 | 0.822054 | 2.908024e-53 | -8.615850e-47 |
| Msa0515930 | Msa0538440 | 0.804293 | 2.316302e-49 | -8.615850e-47 |
| Msa0515930 | Msa0538450 | 0.818984 | 1.473347e-52 | -8.615850e-47 |
| Msa0515930 | Msa0538520 | 0.821566 | 3.771574e-53 | -8.615850e-47 |
| Msa0515930 | Msa0538650 | 0.848656 | 5.333356e-60 | -8.615850e-47 |
| Msa0515930 | Msa0565530 | -0.819740 | 9.911415e-53 | -8.615850e-47 |
| Msa0515930 | Msa0573970 | -0.808687 | 2.739907e-50 | -8.615850e-47 |
| Msa0515930 | Msa0581190 | -0.806785 | 6.947630e-50 | -8.615850e-47 |
| Msa0515930 | Msa0589720 | 0.818374 | 2.026948e-52 | -8.615850e-47 |
| Msa0515930 | Msa0589740 | 0.805977 | 1.028407e-49 | -8.615850e-47 |
| Msa0515930 | Msa0594320 | 0.808858 | 2.518421e-50 | -8.615850e-47 |
| Msa0515930 | Msa0594330 | 0.801402 | 9.160012e-49 | -8.615850e-47 |
| Msa0515930 | Msa0605020 | 0.842668 | 2.246152e-58 | -8.615850e-47 |
| Msa0515930 | Msa0618260 | -0.807849 | 4.133677e-50 | -8.615850e-47 |
| Msa0515930 | Msa0618490 | -0.802316 | 5.944846e-49 | -8.615850e-47 |
| Msa0515930 | Msa0622690 | -0.819740 | 9.908456e-53 | -8.615850e-47 |
| Msa0515930 | Msa0646670 | 0.856552 | 2.977961e-62 | -8.615850e-47 |
| Msa0515930 | Msa0662670 | -0.808210 | 3.464073e-50 | -8.615850e-47 |
| Msa0515930 | Msa0667640 | 0.804992 | 1.655491e-49 | -8.615850e-47 |
| Msa0515930 | Msa0668160 | -0.819982 | 8.724186e-53 | -8.615850e-47 |
| Msa0515930 | Msa0668210 | 0.828000 | 1.146568e-54 | -8.615850e-47 |
| Msa0515930 | Msa0671400 | 0.805426 | 1.342313e-49 | -8.615850e-47 |
| Msa0515930 | Msa0672780 | 0.846481 | 2.114063e-59 | -8.615850e-47 |
| Msa0515930 | Msa0708870 | -0.808386 | 3.176854e-50 | -8.615850e-47 |
| Msa0515930 | Msa0709820 | 0.823920 | 1.068261e-53 | -8.615850e-47 |
| Msa0515930 | Msa0711240 | 0.826535 | 2.572340e-54 | -8.615850e-47 |
| Msa0515930 | Msa0712100 | -0.814311 | 1.643744e-51 | -8.615850e-47 |
| Msa0515930 | Msa0715260 | 0.820554 | 6.452180e-53 | -8.615850e-47 |
| Msa0515930 | Msa0716600 | 0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0515930 | Msa0735340 | 0.853925 | 1.730710e-61 | -8.615850e-47 |
| Msa0515930 | Msa0747500 | 0.816019 | 6.859926e-52 | -8.615850e-47 |
| Msa0515930 | Msa0748050 | -0.802638 | 5.101356e-49 | -8.615850e-47 |
| Msa0515930 | Msa0749900 | -0.812183 | 4.818184e-51 | -8.615850e-47 |
| Msa0515930 | Msa0757240 | 0.818506 | 1.892260e-52 | -8.615850e-47 |
| Msa0515930 | Msa0757990 | 0.808414 | 3.133912e-50 | -8.615850e-47 |
| Msa0515930 | Msa0758000 | 0.818545 | 1.853668e-52 | -8.615850e-47 |
| Msa0515930 | Msa0770890 | -0.811792 | 5.863069e-51 | -8.615850e-47 |
| Msa0515930 | Msa0774560 | -0.818812 | 1.612461e-52 | -8.615850e-47 |
| Msa0515930 | Msa0777210 | 0.823092 | 1.668741e-53 | -8.615850e-47 |
| Msa0515930 | Msa0787860 | 0.811084 | 8.356856e-51 | -8.615850e-47 |
| Msa0515930 | Msa0797010 | -0.820956 | 5.215771e-53 | -8.615850e-47 |
| Msa0515930 | Msa0797980 | -0.807710 | 4.425572e-50 | -8.615850e-47 |
| Msa0515930 | Msa0798230 | 0.824049 | 9.963646e-54 | -8.615850e-47 |
| Msa0515930 | Msa0814350 | 0.837551 | 4.863792e-57 | -8.615850e-47 |
| Msa0515930 | Msa0829430 | -0.804731 | 1.876308e-49 | -8.615850e-47 |
| Msa0515930 | Msa0830120 | -0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0515930 | Msa0830450 | -0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0515930 | Msa0830830 | -0.804899 | 1.731062e-49 | -8.615850e-47 |
| Msa0515930 | Msa0834690 | -0.803763 | 2.985108e-49 | -8.615850e-47 |
| Msa0515930 | Msa0836740 | 0.817968 | 2.503745e-52 | -8.615850e-47 |
| Msa0515930 | Msa0838100 | -0.826908 | 2.095554e-54 | -8.615850e-47 |
| Msa0515930 | Msa0848720 | -0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0515930 | Msa0849130 | -0.802136 | 6.474784e-49 | -8.615850e-47 |
| Msa0515930 | Msa0854860 | 0.832856 | 7.446140e-56 | -8.615850e-47 |
| Msa0515930 | Msa0861480 | -0.818759 | 1.657486e-52 | -8.615850e-47 |
| Msa0515930 | Msa0878410 | 0.811862 | 5.663055e-51 | -8.615850e-47 |
| Msa0515930 | Msa0896990 | 0.825125 | 5.557778e-54 | -8.615850e-47 |
| Msa0515930 | Msa0902340 | 0.806445 | 8.199174e-50 | -8.615850e-47 |
| Msa0515930 | Msa0917630 | -0.813813 | 2.116277e-51 | -8.615850e-47 |
| Msa0515930 | Msa0925640 | 0.816454 | 5.483547e-52 | -8.615850e-47 |
| Msa0515930 | Msa0932930 | 0.820086 | 8.257629e-53 | -8.615850e-47 |
| Msa0515930 | Msa0941520 | 0.834895 | 2.300984e-56 | -8.615850e-47 |
| Msa0515930 | Msa0962260 | 0.831087 | 2.036718e-55 | -8.615850e-47 |
| Msa0515930 | Msa0978530 | 0.813182 | 2.913125e-51 | -8.615850e-47 |
| Msa0515930 | Msa0985250 | 0.803789 | 2.947598e-49 | -8.615850e-47 |
| Msa0515930 | Msa0996940 | 0.826340 | 2.863274e-54 | -8.615850e-47 |
| Msa0515930 | Msa1024120 | -0.809091 | 2.246172e-50 | -8.615850e-47 |
| Msa0515930 | Msa1031530 | -0.822175 | 2.726578e-53 | -8.615850e-47 |
| Msa0515930 | Msa1036590 | 0.818880 | 1.555827e-52 | -8.615850e-47 |
| Msa0515930 | Msa1046220 | 0.835198 | 1.929804e-56 | -8.615850e-47 |
| Msa0515930 | Msa1052030 | -0.800950 | 1.133282e-48 | -8.615850e-47 |
| Msa0515930 | Msa1061760 | 0.809185 | 2.144270e-50 | -8.615850e-47 |
| Msa0515930 | Msa1061780 | 0.820312 | 7.332559e-53 | -8.615850e-47 |
| Msa0515930 | Msa1076830 | 0.800088 | 1.697987e-48 | -8.615850e-47 |
| Msa0515930 | Msa1076900 | 0.825125 | 5.560225e-54 | -8.615850e-47 |
| Msa0515930 | Msa1084210 | -0.803143 | 4.012250e-49 | -8.615850e-47 |
| Msa0515930 | Msa1085560 | 0.806992 | 6.282844e-50 | -8.615850e-47 |
| Msa0515930 | Msa1101300 | -0.815466 | 9.111887e-52 | -8.615850e-47 |
| Msa0515930 | Msa1107320 | 0.834211 | 3.416675e-56 | -8.615850e-47 |
| Msa0515930 | Msa1107950 | -0.811098 | 8.296024e-51 | -8.615850e-47 |
| Msa0515930 | Msa1109880 | 0.800781 | 1.226653e-48 | -8.615850e-47 |
| Msa0515930 | Msa1109890 | 0.801860 | 7.377084e-49 | -8.615850e-47 |
| Msa0515930 | Msa1112040 | 0.802239 | 6.166101e-49 | -8.615850e-47 |
| Msa0515930 | Msa1128230 | -0.808080 | 3.691625e-50 | -8.615850e-47 |
| Msa0515930 | Msa1138110 | 0.805295 | 1.429955e-49 | -8.615850e-47 |
| Msa0515930 | Msa1150860 | 0.815669 | 8.210925e-52 | -8.615850e-47 |
| Msa0515930 | Msa1150870 | 0.805122 | 1.554718e-49 | -8.615850e-47 |
| Msa0515930 | Msa1150880 | 0.812851 | 3.443176e-51 | -8.615850e-47 |
| Msa0515930 | Msa1157310 | -0.801113 | 1.049507e-48 | -8.615850e-47 |
| Msa0515930 | Msa1166020 | -0.805023 | 1.630213e-49 | -8.615850e-47 |
| Msa0515930 | Msa1171630 | 0.812749 | 3.624728e-51 | -8.615850e-47 |
| Msa0515930 | Msa1173290 | 0.813574 | 2.389173e-51 | -8.615850e-47 |
| Msa0515930 | Msa1182400 | -0.825535 | 4.445999e-54 | -8.615850e-47 |
| Msa0515930 | Msa1199750 | -0.822235 | 2.639974e-53 | -8.615850e-47 |
| Msa0515930 | Msa1200070 | 0.804838 | 1.782108e-49 | -8.615850e-47 |
| Msa0515930 | Msa1208250 | -0.813824 | 2.104446e-51 | -8.615850e-47 |
| Msa0515930 | Msa1214960 | 0.800266 | 1.562169e-48 | -8.615850e-47 |
| Msa0515930 | Msa1216120 | 0.804030 | 2.627103e-49 | -8.615850e-47 |
| Msa0515930 | Msa1219780 | 0.832175 | 1.098276e-55 | -8.615850e-47 |
| Msa0515930 | Msa1221170 | 0.819291 | 1.254629e-52 | -8.615850e-47 |
| Msa0515930 | Msa1221540 | -0.803486 | 3.407151e-49 | -8.615850e-47 |
| Msa0515930 | Msa1222030 | 0.802409 | 5.688246e-49 | -8.615850e-47 |
| Msa0515930 | Msa1223600 | -0.803364 | 3.610580e-49 | -8.615850e-47 |
| Msa0515930 | Msa1230190 | -0.818259 | 2.151806e-52 | -8.615850e-47 |
| Msa0515930 | Msa1235770 | -0.804169 | 2.457211e-49 | -8.615850e-47 |
| Msa0515930 | Msa1251500 | 0.828853 | 7.136404e-55 | -8.615850e-47 |
| Msa0515930 | Msa1254990 | -0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0515930 | Msa1258200 | -0.831848 | 1.322983e-55 | -8.615850e-47 |
| Msa0515930 | Msa1259560 | 0.811940 | 5.443444e-51 | -8.615850e-47 |
| Msa0515930 | Msa1263000 | 0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0515930 | Msa1265500 | 0.815192 | 1.048591e-51 | -8.615850e-47 |
| Msa0515930 | Msa1266710 | 0.848771 | 4.957055e-60 | -8.615850e-47 |
| Msa0515930 | Msa1272770 | -0.812631 | 3.847798e-51 | -8.615850e-47 |
| Msa0515930 | Msa1279310 | -0.807671 | 4.511592e-50 | -8.615850e-47 |
| Msa0515930 | Msa1279320 | -0.817311 | 3.522473e-52 | -8.615850e-47 |
| Msa0515930 | Msa1286950 | -0.841540 | 4.466219e-58 | -8.615850e-47 |
| Msa0515930 | Msa1299280 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0515930 | Msa1319230 | -0.839366 | 1.654623e-57 | -8.615850e-47 |
| Msa0515930 | Msa1319440 | -0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa0515930 | Msa1328600 | -0.820966 | 5.187719e-53 | -8.615850e-47 |
| Msa0515930 | Msa1329090 | 0.809334 | 1.992174e-50 | -8.615850e-47 |
| Msa0515930 | Msa1334020 | -0.801744 | 7.794160e-49 | -8.615850e-47 |
| Msa0515930 | Msa1335500 | 0.810138 | 1.337777e-50 | -8.615850e-47 |
| Msa0515930 | Msa1348630 | -0.804243 | 2.371402e-49 | -8.615850e-47 |
| Msa0515930 | Msa1357380 | -0.809864 | 1.532505e-50 | -8.615850e-47 |
| Msa0515930 | Msa1359620 | -0.808025 | 3.792803e-50 | -8.615850e-47 |
| Msa0515930 | Msa1363840 | 0.810146 | 1.332770e-50 | -8.615850e-47 |
| Msa0515930 | Msa1366700 | -0.811126 | 8.180877e-51 | -8.615850e-47 |
| Msa0515930 | Msa1371840 | -0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0515930 | Msa1373560 | 0.812914 | 3.336013e-51 | -8.615850e-47 |
| Msa0515930 | Msa1377460 | 0.822971 | 1.780417e-53 | -8.615850e-47 |
| Msa0515930 | Msa1379250 | 0.866465 | 2.795849e-65 | -8.615850e-47 |
| Msa0515930 | Msa1384980 | -0.809260 | 2.065768e-50 | -8.615850e-47 |
| Msa0515930 | Msa1390040 | 0.830616 | 2.657043e-55 | -8.615850e-47 |
| Msa0515930 | Msa1395690 | 0.820330 | 7.262947e-53 | -8.615850e-47 |
| Msa0515930 | Msa1395700 | -0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0515930 | Msa1395720 | 0.829001 | 6.570453e-55 | -8.615850e-47 |
| Msa0515930 | Msa1402000 | 0.836606 | 8.481801e-57 | -8.615850e-47 |
| Msa0515930 | Msa1403700 | -0.810625 | 1.050519e-50 | -8.615850e-47 |
| Msa0515930 | Msa1407210 | 0.838286 | 3.147765e-57 | -8.615850e-47 |
| Msa0515930 | Msa1409060 | 0.855319 | 6.834492e-62 | -8.615850e-47 |
| Msa0515930 | Msa1412740 | -0.807777 | 4.283367e-50 | -8.615850e-47 |
| Msa0515930 | Msa1426690 | -0.810008 | 1.426693e-50 | -8.615850e-47 |
| Msa0515930 | Msa1429810 | 0.809406 | 1.922660e-50 | -8.615850e-47 |
| Msa0515930 | Msa1431870 | -0.803090 | 4.114307e-49 | -8.615850e-47 |
| Msa0515930 | Msa1432250 | -0.817820 | 2.704977e-52 | -8.615850e-47 |
| Msa0515930 | Msa1433380 | -0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0515930 | Msa1434700 | 0.804467 | 2.130781e-49 | -8.615850e-47 |
| Msa0515930 | Msa1437650 | -0.812796 | 3.539241e-51 | -8.615850e-47 |
| Msa0515930 | Msa1441300 | 0.817247 | 3.639961e-52 | -8.615850e-47 |
| Msa0515930 | Msa1449510 | -0.802694 | 4.967159e-49 | -8.615850e-47 |
| Msa0515930 | Msa1450850 | -0.820575 | 6.379129e-53 | -8.615850e-47 |
| Msa0515930 | Msa1458370 | 0.813990 | 1.934456e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515930 | MtrunA17_Chr3g0125961 | 98.421 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 0.0 | 777 |
| Msa0515930 | MtrunA17_Chr3g0125911 | 98.158 | 380 | 7 | 0 | 1 | 380 | 1 | 380 | 0.0 | 776 |
| Msa0515930 | MtrunA17_Chr3g0125941 | 96.588 | 381 | 12 | 1 | 1 | 380 | 1 | 381 | 0.0 | 761 |
| Msa0515930 | MtrunA17_Chr7g0262421 | 58.355 | 377 | 157 | 0 | 2 | 378 | 3 | 379 | 1.93e-170 | 480 |
| Msa0515930 | MtrunA17_Chr1g0183131 | 56.533 | 375 | 163 | 0 | 4 | 378 | 3 | 377 | 1.31e-164 | 466 |
| Msa0515930 | MtrunA17_Chr6g0478081 | 50.660 | 379 | 183 | 2 | 2 | 380 | 3 | 377 | 1.14e-142 | 410 |
| Msa0515930 | MtrunA17_Chr7g0242291 | 48.825 | 383 | 190 | 5 | 1 | 378 | 12 | 393 | 3.94e-128 | 374 |
| Msa0515930 | MtrunA17_Chr3g0132351 | 49.604 | 379 | 185 | 4 | 6 | 379 | 13 | 390 | 5.92e-121 | 355 |
| Msa0515930 | MtrunA17_Chr5g0440521 | 44.947 | 376 | 205 | 2 | 7 | 380 | 16 | 391 | 4.11e-120 | 353 |
| Msa0515930 | MtrunA17_Chr3g0118441 | 42.632 | 380 | 216 | 2 | 2 | 379 | 6 | 385 | 3.50e-110 | 327 |
| Msa0515930 | MtrunA17_Chr7g0242301 | 44.972 | 358 | 160 | 5 | 25 | 378 | 1 | 325 | 1.20e-103 | 308 |
| Msa0515930 | MtrunA17_Chr4g0021211 | 39.788 | 377 | 217 | 5 | 5 | 378 | 29 | 398 | 1.37e-91 | 280 |
| Msa0515930 | MtrunA17_Chr5g0419681 | 39.474 | 380 | 222 | 6 | 1 | 378 | 1 | 374 | 6.34e-90 | 275 |
| Msa0515930 | MtrunA17_Chr3g0118431 | 42.279 | 272 | 155 | 2 | 101 | 370 | 19 | 290 | 2.62e-72 | 227 |
| Msa0515930 | MtrunA17_Chr8g0385221 | 31.316 | 380 | 238 | 15 | 12 | 378 | 55 | 424 | 2.80e-44 | 158 |
| Msa0515930 | MtrunA17_Chr6g0474141 | 25.405 | 370 | 224 | 13 | 16 | 369 | 19 | 352 | 5.07e-22 | 96.3 |
| Msa0515930 | MtrunA17_Chr5g0411801 | 23.641 | 368 | 238 | 14 | 12 | 370 | 43 | 376 | 1.02e-13 | 72.0 |
| Msa0515930 | MtrunA17_Chr4g0064291 | 25.882 | 340 | 212 | 10 | 37 | 370 | 39 | 344 | 3.82e-13 | 70.1 |
| Msa0515930 | MtrunA17_Chr5g0411931 | 24.484 | 339 | 218 | 9 | 37 | 370 | 39 | 344 | 4.51e-13 | 69.7 |
| Msa0515930 | MtrunA17_Chr5g0411821 | 23.894 | 339 | 220 | 10 | 37 | 370 | 39 | 344 | 5.20e-12 | 66.6 |
| Msa0515930 | MtrunA17_Chr5g0411811 | 24.702 | 336 | 221 | 10 | 37 | 370 | 39 | 344 | 2.02e-11 | 64.7 |
| Msa0515930 | MtrunA17_Chr5g0411841 | 22.552 | 337 | 227 | 10 | 37 | 370 | 39 | 344 | 3.20e-11 | 64.3 |
| Msa0515930 | MtrunA17_Chr1g0157021 | 23.547 | 344 | 216 | 9 | 37 | 370 | 38 | 344 | 3.75e-11 | 63.9 |
| Msa0515930 | MtrunA17_Chr5g0411911 | 22.552 | 337 | 227 | 8 | 37 | 370 | 41 | 346 | 6.43e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515930 | AT1G77120.1 | 84.309 | 376 | 59 | 0 | 3 | 378 | 2 | 377 | 0.0 | 674 |
| Msa0515930 | AT5G43940.1 | 58.713 | 373 | 154 | 0 | 4 | 376 | 3 | 375 | 2.03e-168 | 476 |
| Msa0515930 | AT5G43940.2 | 56.623 | 385 | 155 | 1 | 4 | 376 | 3 | 387 | 2.51e-164 | 466 |
| Msa0515930 | AT5G24760.1 | 52.151 | 372 | 174 | 2 | 7 | 378 | 12 | 379 | 3.10e-147 | 422 |
| Msa0515930 | AT1G32780.1 | 49.744 | 390 | 186 | 2 | 1 | 380 | 1 | 390 | 4.43e-142 | 409 |
| Msa0515930 | AT1G64710.1 | 49.206 | 378 | 189 | 2 | 4 | 378 | 3 | 380 | 3.46e-141 | 406 |
| Msa0515930 | AT5G24760.2 | 51.130 | 354 | 169 | 2 | 25 | 378 | 1 | 350 | 2.11e-136 | 393 |
| Msa0515930 | AT5G24760.3 | 51.130 | 354 | 169 | 2 | 25 | 378 | 1 | 350 | 2.11e-136 | 393 |
| Msa0515930 | AT1G64710.2 | 48.179 | 357 | 182 | 2 | 25 | 378 | 1 | 357 | 1.22e-129 | 376 |
| Msa0515930 | AT5G42250.1 | 46.381 | 373 | 197 | 3 | 9 | 378 | 17 | 389 | 3.06e-119 | 351 |
| Msa0515930 | AT1G22440.1 | 48.579 | 387 | 186 | 6 | 2 | 380 | 5 | 386 | 1.42e-118 | 349 |
| Msa0515930 | AT1G22430.2 | 46.475 | 383 | 202 | 3 | 1 | 380 | 6 | 388 | 3.84e-116 | 343 |
| Msa0515930 | AT1G22430.1 | 46.475 | 383 | 202 | 3 | 1 | 380 | 6 | 388 | 3.84e-116 | 343 |
| Msa0515930 | AT4G22110.2 | 46.719 | 381 | 194 | 4 | 6 | 380 | 12 | 389 | 1.03e-113 | 337 |
| Msa0515930 | AT4G22110.1 | 46.719 | 381 | 194 | 4 | 6 | 380 | 12 | 389 | 1.03e-113 | 337 |
| Msa0515930 | AT1G64710.3 | 47.059 | 306 | 160 | 1 | 75 | 378 | 6 | 311 | 3.63e-107 | 317 |
| Msa0515930 | AT5G24760.4 | 47.368 | 266 | 139 | 1 | 113 | 378 | 1 | 265 | 1.18e-92 | 279 |
| Msa0515930 | AT1G22430.3 | 50.000 | 286 | 140 | 3 | 1 | 283 | 6 | 291 | 9.72e-90 | 273 |
| Msa0515930 | AT1G22430.4 | 51.406 | 249 | 119 | 2 | 1 | 247 | 6 | 254 | 2.44e-81 | 251 |
| Msa0515930 | AT1G22430.5 | 51.406 | 249 | 119 | 2 | 1 | 247 | 6 | 254 | 2.44e-81 | 251 |
| Msa0515930 | AT4G22110.3 | 51.626 | 246 | 111 | 3 | 6 | 246 | 12 | 254 | 5.19e-77 | 239 |
| Msa0515930 | AT5G63620.1 | 30.749 | 374 | 235 | 14 | 12 | 372 | 57 | 419 | 6.80e-40 | 147 |
| Msa0515930 | AT5G63620.2 | 30.108 | 372 | 240 | 12 | 12 | 372 | 57 | 419 | 1.98e-39 | 145 |
| Msa0515930 | AT5G63620.3 | 30.800 | 250 | 158 | 8 | 12 | 251 | 57 | 301 | 4.61e-28 | 112 |
| Msa0515930 | AT5G51970.1 | 23.454 | 388 | 243 | 14 | 1 | 371 | 6 | 356 | 2.09e-17 | 83.2 |
| Msa0515930 | AT5G51970.2 | 23.454 | 388 | 243 | 14 | 1 | 371 | 6 | 356 | 2.09e-17 | 83.2 |
| Msa0515930 | AT1G72680.1 | 25.223 | 337 | 217 | 9 | 37 | 370 | 37 | 341 | 8.03e-14 | 72.4 |
| Msa0515930 | AT4G37990.1 | 24.444 | 315 | 207 | 8 | 37 | 346 | 35 | 323 | 2.10e-12 | 68.2 |
Find 153 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCAGTGACCTTTATTTAT+AGG | 0.203455 | 3_4:-67308679 | None:intergenic |
| TTCCATATATTGAAGGAAAA+TGG | 0.218301 | 3_4:+67311503 | Msa0515930:three_prime_UTR |
| CAGGTTTGTCATGATCTTTC+GGG | 0.232230 | 3_4:-67310566 | None:intergenic |
| GGTTCATCTGTTGCTATCTT+TGG | 0.236969 | 3_4:+67310182 | Msa0515930:CDS |
| GCTTTGTTAATCTCTGAAAA+TGG | 0.242441 | 3_4:-67311213 | None:intergenic |
| GTTTCCAGCCGATATGAATT+AGG | 0.257110 | 3_4:+67310404 | Msa0515930:CDS |
| GTCACACTGATGTTTACTTC+TGG | 0.274790 | 3_4:+67309302 | Msa0515930:CDS |
| GGGTTTGTAGTTTCCATAAA+AGG | 0.277064 | 3_4:-67311007 | None:intergenic |
| ATTTCATAAATAATCCCTTT+TGG | 0.286549 | 3_4:+67311366 | Msa0515930:three_prime_UTR |
| TTGTTGGCAGCTAAGAAGTT+TGG | 0.287505 | 3_4:+67310525 | Msa0515930:intron |
| TTTCCAACCAGCGGCGCCTT+TGG | 0.288212 | 3_4:-67308515 | None:intergenic |
| CCATTGTTTCCTCGTATATT+TGG | 0.294860 | 3_4:+67309544 | Msa0515930:CDS |
| TTCCAACCAGCGGCGCCTTT+GGG | 0.298415 | 3_4:-67308514 | None:intergenic |
| ACAGGTTTGTCATGATCTTT+CGG | 0.301321 | 3_4:-67310567 | None:intergenic |
| GCAACAGATGAACCGGGTTT+TGG | 0.302998 | 3_4:-67310173 | None:intergenic |
| TCAGTCAAGATTCTCTATTA+AGG | 0.310729 | 3_4:+67309896 | Msa0515930:CDS |
| GCAACATGTGTGATCTTCTT+AGG | 0.311495 | 3_4:+67309838 | Msa0515930:CDS |
| TGTTGGCAGCTAAGAAGTTT+GGG | 0.311983 | 3_4:+67310526 | Msa0515930:intron |
| TTAAAGTACTATACTATGTT+TGG | 0.313560 | 3_4:+67308604 | Msa0515930:five_prime_UTR |
| GCTGAAGGGGCAAGGATGTC+TGG | 0.323064 | 3_4:+67310353 | Msa0515930:CDS |
| GTTGAATGAAAGGACTCTTA+AGG | 0.347627 | 3_4:+67310981 | Msa0515930:CDS |
| CTTTCATTCAACAAATTCAT+AGG | 0.348960 | 3_4:-67310970 | None:intergenic |
| ATCTTTGGACTTGGAGCTGT+TGG | 0.351212 | 3_4:+67310197 | Msa0515930:CDS |
| TGGGGTGTTGCTGTACTTGT+GGG | 0.354819 | 3_4:+67310913 | Msa0515930:CDS |
| TTGAATGAAAGGACTCTTAA+GGG | 0.375052 | 3_4:+67310982 | Msa0515930:CDS |
| GTTGAACTAACTTGTTGAAC+AGG | 0.390252 | 3_4:-67310585 | None:intergenic |
| ACTTTGTCAAGAGGTGCATC+AGG | 0.391287 | 3_4:-67310002 | None:intergenic |
| GCTGCGGTTGCATGGGAGGC+GGG | 0.399452 | 3_4:+67309196 | Msa0515930:intron |
| TGAAATGCATCATCTTTGTT+TGG | 0.400997 | 3_4:-67310940 | None:intergenic |
| TCACACTGATGTTTACTTCT+GGG | 0.404127 | 3_4:+67309303 | Msa0515930:CDS |
| CAGAAACTCAATAATCCAAA+AGG | 0.410611 | 3_4:-67311381 | None:intergenic |
| AAAGATAGCAACAGATGAAC+CGG | 0.416086 | 3_4:-67310180 | None:intergenic |
| TGGAACCAGCTGCGGTTGCA+TGG | 0.416145 | 3_4:+67309188 | Msa0515930:intron |
| TCTGTTGCTATCTTTGGACT+TGG | 0.419387 | 3_4:+67310188 | Msa0515930:CDS |
| GATATTACAGGAACTGGAAC+TGG | 0.426601 | 3_4:+67311167 | Msa0515930:intron |
| CATGTAAAGAATTATGCTAC+TGG | 0.429567 | 3_4:+67311421 | Msa0515930:three_prime_UTR |
| CAGTCAAGATTCTCTATTAA+GGG | 0.430904 | 3_4:+67309897 | Msa0515930:CDS |
| CGTATATTTGGTCATGAAGC+TGG | 0.431276 | 3_4:+67309556 | Msa0515930:CDS |
| TACTATGCACCTATAAATAA+AGG | 0.437623 | 3_4:+67308670 | Msa0515930:five_prime_UTR |
| TTGGGGTGTTGCTGTACTTG+TGG | 0.440456 | 3_4:+67310912 | Msa0515930:CDS |
| AGCTGCGGTTGCATGGGAGG+CGG | 0.441799 | 3_4:+67309195 | Msa0515930:intron |
| TATTTATAGGTGCATAGTAC+TGG | 0.441832 | 3_4:-67308666 | None:intergenic |
| AAGTGATTTCCATATATTGA+AGG | 0.441903 | 3_4:+67311496 | Msa0515930:three_prime_UTR |
| GAATAAGAAGGGAAAAGAAA+AGG | 0.458602 | 3_4:+67308423 | Msa0515930:five_prime_UTR |
| AGCCCAAAGGCGCCGCTGGT+TGG | 0.462650 | 3_4:+67308512 | Msa0515930:five_prime_UTR |
| GGCGGGGAAGCCACTAGTGA+TGG | 0.462689 | 3_4:+67309213 | Msa0515930:CDS |
| TCTGGTGCATCAAGAATCAT+TGG | 0.470218 | 3_4:+67310371 | Msa0515930:CDS |
| TCAAAGCCCAAAGGCGCCGC+TGG | 0.471052 | 3_4:+67308508 | Msa0515930:five_prime_UTR |
| CCACACTCCCCTGTGAATAC+AGG | 0.474104 | 3_4:-67309786 | None:intergenic |
| ACATTAAAATACTACCACTT+TGG | 0.474800 | 3_4:-67308570 | None:intergenic |
| CCTGTATTCACAGGGGAGTG+TGG | 0.474817 | 3_4:+67309786 | Msa0515930:CDS |
| CTATGAATTTGTTGAATGAA+AGG | 0.476135 | 3_4:+67310971 | Msa0515930:CDS |
| AGCTTATGTCGGTAGCTTGA+TGG | 0.476330 | 3_4:+67308480 | Msa0515930:five_prime_UTR |
| CATGCCCTGCCTGTATTCAC+AGG | 0.480140 | 3_4:+67309777 | Msa0515930:CDS |
| ACAGGCAGGGCATGATCCCC+TGG | 0.483648 | 3_4:-67309768 | None:intergenic |
| CTGTATTCACAGGGGAGTGT+GGG | 0.483700 | 3_4:+67309787 | Msa0515930:CDS |
| ACCAGCTGCGGTTGCATGGG+AGG | 0.486050 | 3_4:+67309192 | Msa0515930:intron |
| AATGAACAGAAAATTTAGAA+TGG | 0.489887 | 3_4:-67308776 | None:intergenic |
| ACATTCGAATGCGGAGATCA+TGG | 0.489895 | 3_4:-67310779 | None:intergenic |
| AACATTAGGAAGATCGGTGC+GGG | 0.496664 | 3_4:-67311028 | None:intergenic |
| ACCAAAATTTAGGCTGCTGA+AGG | 0.497900 | 3_4:+67310338 | Msa0515930:intron |
| TTCTTAGGATCAACACGGAC+AGG | 0.502318 | 3_4:+67309853 | Msa0515930:CDS |
| TCAAGAGTATAAGAATAAGA+AGG | 0.502440 | 3_4:+67308411 | Msa0515930:five_prime_UTR |
| TTCAACAACATTAGGAAGAT+CGG | 0.502724 | 3_4:-67311034 | None:intergenic |
| TGTACCTAATTCATATCGGC+TGG | 0.503093 | 3_4:-67310408 | None:intergenic |
| CAAGAGTATAAGAATAAGAA+GGG | 0.503328 | 3_4:+67308412 | Msa0515930:five_prime_UTR |
| TTAACCATGTCCAACACTGC+TGG | 0.504696 | 3_4:+67308811 | Msa0515930:exon |
| GGAACCAGCTGCGGTTGCAT+GGG | 0.505012 | 3_4:+67309189 | Msa0515930:intron |
| GTTGTTGAAAAGTATATGAA+AGG | 0.506752 | 3_4:+67311048 | Msa0515930:CDS |
| ATCAAGCTACCGACATAAGC+TGG | 0.507238 | 3_4:-67308478 | None:intergenic |
| TCAAATATTCTATACTATTG+TGG | 0.508547 | 3_4:+67311309 | Msa0515930:three_prime_UTR |
| CCAAAATTTAGGCTGCTGAA+GGG | 0.515926 | 3_4:+67310339 | Msa0515930:intron |
| CATTCGTATGATACATCTGA+TGG | 0.516064 | 3_4:-67311262 | None:intergenic |
| ATGTAGATGTACCGACGAAA+TGG | 0.519367 | 3_4:-67309932 | None:intergenic |
| TTGTTGAAAAGTATATGAAA+GGG | 0.519520 | 3_4:+67311049 | Msa0515930:CDS |
| GCGTTGTACCTAATTCATAT+CGG | 0.523069 | 3_4:-67310412 | None:intergenic |
| CTGCGGTTGCATGGGAGGCG+GGG | 0.533283 | 3_4:+67309197 | Msa0515930:CDS |
| CTCAGCTGTGGAATATGCAC+AGG | 0.542001 | 3_4:+67310032 | Msa0515930:CDS |
| TGTTTACTTCTGGGAAGCTA+AGG | 0.543162 | 3_4:+67309312 | Msa0515930:CDS |
| AGACGGACTTCACCGGCTTG+TGG | 0.546092 | 3_4:-67309256 | None:intergenic |
| AGAAACTCAATAATCCAAAA+GGG | 0.547314 | 3_4:-67311380 | None:intergenic |
| AGTAAACATCAGTGTGACAA+AGG | 0.551878 | 3_4:-67309297 | None:intergenic |
| TCTAATGTCGATCAGGATTG+TGG | 0.553261 | 3_4:+67309713 | Msa0515930:intron |
| GATCGTGCTGTTGAATGTAC+CGG | 0.554177 | 3_4:+67310745 | Msa0515930:CDS |
| GTGCATAGTACTGGCACTAG+TGG | 0.554359 | 3_4:-67308657 | None:intergenic |
| GATCATGGCCTGGATGCTCC+CGG | 0.555005 | 3_4:-67310764 | None:intergenic |
| GTACCGACGAAATGGTGAAT+CGG | 0.555313 | 3_4:-67309924 | None:intergenic |
| AAACAATCAAAATTTATGTA+CGG | 0.557628 | 3_4:+67308387 | Msa0515930:five_prime_UTR |
| AAAGTTTGTATTCTCAGCTG+TGG | 0.560671 | 3_4:+67310020 | Msa0515930:CDS |
| GTTGGCAGCTAAGAAGTTTG+GGG | 0.561606 | 3_4:+67310527 | Msa0515930:intron |
| TATCTTGAGACGGACTTCAC+CGG | 0.564597 | 3_4:-67309263 | None:intergenic |
| CATCAGATGTATCATACGAA+TGG | 0.567879 | 3_4:+67311263 | Msa0515930:CDS |
| ATGTAAAGAATTATGCTACT+GGG | 0.572185 | 3_4:+67311422 | Msa0515930:three_prime_UTR |
| GGTGTGACAGATCTAAAACC+AGG | 0.572762 | 3_4:+67309750 | Msa0515930:CDS |
| GTAAACATCAGTGTGACAAA+GGG | 0.577816 | 3_4:-67309296 | None:intergenic |
| ACTAGTGATGGAAGAAGTAG+AGG | 0.578019 | 3_4:+67309225 | Msa0515930:CDS |
| CAAAATTTAGGCTGCTGAAG+GGG | 0.579040 | 3_4:+67310340 | Msa0515930:intron |
| ACTCCCCTGTGAATACAGGC+AGG | 0.579461 | 3_4:-67309782 | None:intergenic |
| TCTACTTCTTCCATCACTAG+TGG | 0.581651 | 3_4:-67309223 | None:intergenic |
| GAGTACACTGTGGTTCATGC+CGG | 0.586769 | 3_4:+67309960 | Msa0515930:CDS |
| TGAATGTACCGGGAGCATCC+AGG | 0.589416 | 3_4:+67310756 | Msa0515930:CDS |
| AGAATACAAACTTTGTCAAG+AGG | 0.589584 | 3_4:-67310011 | None:intergenic |
| TTTAGGCTGCTGAAGGGGCA+AGG | 0.589857 | 3_4:+67310345 | Msa0515930:intron |
| CCAAATATACGAGGAAACAA+TGG | 0.590862 | 3_4:-67309544 | None:intergenic |
| TGTATTCACAGGGGAGTGTG+GGG | 0.591767 | 3_4:+67309788 | Msa0515930:CDS |
| CGAATGCGGAGATCATGGCC+TGG | 0.592895 | 3_4:-67310774 | None:intergenic |
| TGCATAGTACTGGCACTAGT+GGG | 0.594232 | 3_4:-67308656 | None:intergenic |
| GATTGTGGAGAGCGTAGGCG+AGG | 0.594735 | 3_4:+67309728 | Msa0515930:CDS |
| TCTTAGGATCAACACGGACA+GGG | 0.595918 | 3_4:+67309854 | Msa0515930:CDS |
| GAGGTGGCGCCACCACAAGC+CGG | 0.602446 | 3_4:+67309244 | Msa0515930:CDS |
| GATGATCTGACCAGCAGTGT+TGG | 0.604173 | 3_4:-67308821 | None:intergenic |
| CTTTGTCAAGAGGTGCATCA+GGG | 0.608085 | 3_4:-67310001 | None:intergenic |
| GTGTGACAGATCTAAAACCA+GGG | 0.609191 | 3_4:+67309751 | Msa0515930:CDS |
| AAATTTAGAATGGAATCGAA+TGG | 0.609686 | 3_4:-67308766 | None:intergenic |
| TACTCGTGTTGTGTTGTCTG+TGG | 0.614457 | 3_4:-67308713 | None:intergenic |
| CAGATGTATCATACGAATGG+AGG | 0.614959 | 3_4:+67311266 | Msa0515930:CDS |
| ACTTGGAGCTGTTGGCCTTG+CGG | 0.616948 | 3_4:+67310205 | Msa0515930:CDS |
| CGGACTTCACCGGCTTGTGG+TGG | 0.618100 | 3_4:-67309253 | None:intergenic |
| CTGTCCACATTGTAAGTCAG+AGG | 0.618115 | 3_4:+67309812 | Msa0515930:CDS |
| AGCACGATCCACACCTCCGT+TGG | 0.619268 | 3_4:-67310731 | None:intergenic |
| CAGCCGATTCACCATTTCGT+CGG | 0.625858 | 3_4:+67309921 | Msa0515930:CDS |
| TGTTGAAAAGTATATGAAAG+GGG | 0.627939 | 3_4:+67311050 | Msa0515930:CDS |
| ATCGTGGACACATTCGAATG+CGG | 0.633600 | 3_4:-67310788 | None:intergenic |
| CTCTCCTCTGACTTACAATG+TGG | 0.634714 | 3_4:-67309816 | None:intergenic |
| ATCGTGCTGTTGAATGTACC+GGG | 0.636717 | 3_4:+67310746 | Msa0515930:CDS |
| ATATTTGGTCATGAAGCTGG+AGG | 0.639817 | 3_4:+67309559 | Msa0515930:CDS |
| ATGCCCTGCCTGTATTCACA+GGG | 0.640094 | 3_4:+67309778 | Msa0515930:CDS |
| AACATCAGTGTGACAAAGGG+AGG | 0.641785 | 3_4:-67309293 | None:intergenic |
| AGGTGAAGAGTATCTTGAGA+CGG | 0.642729 | 3_4:-67309273 | None:intergenic |
| GGTCAGATCATCAAGTGTAG+AGG | 0.647505 | 3_4:+67308832 | Msa0515930:CDS |
| AGTCGAAAACCAGCTTATGT+CGG | 0.651787 | 3_4:+67308469 | Msa0515930:five_prime_UTR |
| CTGACCAGCAGTGTTGGACA+TGG | 0.657057 | 3_4:-67308815 | None:intergenic |
| ATCAGGATTGTGGAGAGCGT+AGG | 0.659938 | 3_4:+67309723 | Msa0515930:intron |
| TATTTGGTCATGAAGCTGGA+GGG | 0.661233 | 3_4:+67309560 | Msa0515930:CDS |
| CTTAGGATCAACACGGACAG+GGG | 0.662424 | 3_4:+67309855 | Msa0515930:CDS |
| ATTGTGGAGAGCGTAGGCGA+GGG | 0.662603 | 3_4:+67309729 | Msa0515930:CDS |
| ATGGCAAAGTCAAAGCCCAA+AGG | 0.663773 | 3_4:+67308499 | Msa0515930:five_prime_UTR |
| AAGATAGCAACAGATGAACC+GGG | 0.667433 | 3_4:-67310179 | None:intergenic |
| AGTGATGGAAGAAGTAGAGG+TGG | 0.673070 | 3_4:+67309228 | Msa0515930:CDS |
| CTCCCCTGTGAATACAGGCA+GGG | 0.674123 | 3_4:-67309781 | None:intergenic |
| AATGTTGCTAAACCAAAACC+CGG | 0.674195 | 3_4:+67310161 | Msa0515930:CDS |
| TGAAATGACCAACGGAGGTG+TGG | 0.677840 | 3_4:+67310723 | Msa0515930:CDS |
| GTAATTGCTGAAATGACCAA+CGG | 0.682154 | 3_4:+67310715 | Msa0515930:CDS |
| ACATTAGGAAGATCGGTGCG+GGG | 0.687024 | 3_4:-67311027 | None:intergenic |
| GGTATCCCACAAAACCAAAG+TGG | 0.688292 | 3_4:+67308556 | Msa0515930:five_prime_UTR |
| AAATAAAACAACAGCAACAG+CGG | 0.692567 | 3_4:+67308535 | Msa0515930:five_prime_UTR |
| CAACATTAGGAAGATCGGTG+CGG | 0.693905 | 3_4:-67311029 | None:intergenic |
| TGTGACAGATCTAAAACCAG+GGG | 0.720106 | 3_4:+67309752 | Msa0515930:CDS |
| GCTTCATGACCAAATATACG+AGG | 0.725898 | 3_4:-67309553 | None:intergenic |
| TGCCCTGCCTGTATTCACAG+GGG | 0.737931 | 3_4:+67309779 | Msa0515930:CDS |
| TGATCTTCTTAGGATCAACA+CGG | 0.743683 | 3_4:+67309848 | Msa0515930:CDS |
| ATTGCTGAAATGACCAACGG+AGG | 0.744796 | 3_4:+67310718 | Msa0515930:CDS |
| TACATTCAGCGAGTACACTG+TGG | 0.749330 | 3_4:+67309950 | Msa0515930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAACAATCTAAA+TGG | - | chr3_4:67308925-67308944 | None:intergenic | 10.0% |
| !! | ACTTAAAATTAATTTATAGT+TGG | - | chr3_4:67308975-67308994 | None:intergenic | 10.0% |
| !!! | TAATTTTAGTTACAAAATAT+TGG | + | chr3_4:67309413-67309432 | Msa0515930:intron | 10.0% |
| !! | ATATATTAATATCTAAACAT+TGG | - | chr3_4:67310069-67310088 | None:intergenic | 10.0% |
| !! | AAACAATCAAAATTTATGTA+CGG | + | chr3_4:67308387-67308406 | Msa0515930:five_prime_UTR | 15.0% |
| !! | ATTTATGTATAATTCTTCTT+AGG | + | chr3_4:67309388-67309407 | Msa0515930:intron | 15.0% |
| !! | AGATATTAATATATGTTTCT+AGG | + | chr3_4:67310075-67310094 | Msa0515930:intron | 15.0% |
| !! | TTGTAAATTGCAAATATTAT+CGG | + | chr3_4:67310274-67310293 | Msa0515930:intron | 15.0% |
| !!! | TTCTTTTTAAACCAAAATTT+AGG | + | chr3_4:67310328-67310347 | Msa0515930:intron | 15.0% |
| !!! | TTAAAGTACTATACTATGTT+TGG | + | chr3_4:67308604-67308623 | Msa0515930:five_prime_UTR | 20.0% |
| !! | AATGAACAGAAAATTTAGAA+TGG | - | chr3_4:67308779-67308798 | None:intergenic | 20.0% |
| !! | AGAATTTGAGAAAAAATAGA+TGG | - | chr3_4:67308860-67308879 | None:intergenic | 20.0% |
| !! | AAAATAACAATCTAAATGGA+AGG | - | chr3_4:67308921-67308940 | None:intergenic | 20.0% |
| !! | TCGAAAATTATTATCAATGT+CGG | + | chr3_4:67309089-67309108 | Msa0515930:intron | 20.0% |
| !!! | ATGAATGTTATTGATAATTG+TGG | + | chr3_4:67309689-67309708 | Msa0515930:intron | 20.0% |
| !!! | TGAATGTTATTGATAATTGT+GGG | + | chr3_4:67309690-67309709 | Msa0515930:intron | 20.0% |
| !!! | ATATACTTTTCAACAACATT+AGG | - | chr3_4:67311045-67311064 | None:intergenic | 20.0% |
| !!! | TTGTTGAAAAGTATATGAAA+GGG | + | chr3_4:67311049-67311068 | Msa0515930:CDS | 20.0% |
| !! | GATTAATTAATATTGCAGAA+TGG | + | chr3_4:67311110-67311129 | Msa0515930:intron | 20.0% |
| !! | TCAAATATTCTATACTATTG+TGG | + | chr3_4:67311309-67311328 | Msa0515930:three_prime_UTR | 20.0% |
| !!! | ATTTCATAAATAATCCCTTT+TGG | + | chr3_4:67311366-67311385 | Msa0515930:three_prime_UTR | 20.0% |
| !! | TCAAGAGTATAAGAATAAGA+AGG | + | chr3_4:67308411-67308430 | Msa0515930:five_prime_UTR | 25.0% |
| !! | CAAGAGTATAAGAATAAGAA+GGG | + | chr3_4:67308412-67308431 | Msa0515930:five_prime_UTR | 25.0% |
| ! | ACATTAAAATACTACCACTT+TGG | - | chr3_4:67308573-67308592 | None:intergenic | 25.0% |
| ! | TACTATGCACCTATAAATAA+AGG | + | chr3_4:67308670-67308689 | Msa0515930:five_prime_UTR | 25.0% |
| !! | AAATTTAGAATGGAATCGAA+TGG | - | chr3_4:67308769-67308788 | None:intergenic | 25.0% |
| ! | TATGCTTTGATTACATAACA+CGG | + | chr3_4:67309335-67309354 | Msa0515930:intron | 25.0% |
| !!! | AATATTGGCATACTAGTTTT+TGG | + | chr3_4:67309428-67309447 | Msa0515930:intron | 25.0% |
| !! | TTCTTATATTCCTTTGTTTC+AGG | + | chr3_4:67309513-67309532 | Msa0515930:intron | 25.0% |
| !! | TCTTATATTCCTTTGTTTCA+GGG | + | chr3_4:67309514-67309533 | Msa0515930:intron | 25.0% |
| !! | AACTTCAATCTTAAAGCATT+TGG | - | chr3_4:67310451-67310470 | None:intergenic | 25.0% |
| !!! | CTCTTATTTTGTTTTCTTGT+TGG | + | chr3_4:67310509-67310528 | Msa0515930:intron | 25.0% |
| !! | GAATTTGAAGTATGATTCTA+TGG | + | chr3_4:67310634-67310653 | Msa0515930:intron | 25.0% |
| !!! | TGATGTTTGATTTTTATACG+AGG | + | chr3_4:67310664-67310683 | Msa0515930:intron | 25.0% |
| !!! | TTGACTTGTTGTTTTTCTTA+GGG | + | chr3_4:67310889-67310908 | Msa0515930:intron | 25.0% |
| ! | CTTTCATTCAACAAATTCAT+AGG | - | chr3_4:67310973-67310992 | None:intergenic | 25.0% |
| !!! | CTATGAATTTGTTGAATGAA+AGG | + | chr3_4:67310971-67310990 | Msa0515930:CDS | 25.0% |
| !! | GTTGTTGAAAAGTATATGAA+AGG | + | chr3_4:67311048-67311067 | Msa0515930:CDS | 25.0% |
| !! | TGTTGAAAAGTATATGAAAG+GGG | + | chr3_4:67311050-67311069 | Msa0515930:CDS | 25.0% |
| ! | TGATATTACTGTGATATTAC+AGG | + | chr3_4:67311155-67311174 | Msa0515930:intron | 25.0% |
| ! | AGAAACTCAATAATCCAAAA+GGG | - | chr3_4:67311383-67311402 | None:intergenic | 25.0% |
| ! | ATGTAAAGAATTATGCTACT+GGG | + | chr3_4:67311422-67311441 | Msa0515930:three_prime_UTR | 25.0% |
| !!! | AGATTTTGATTTTGTTGTTG+TGG | + | chr3_4:67311467-67311486 | Msa0515930:three_prime_UTR | 25.0% |
| ! | AAGTGATTTCCATATATTGA+AGG | + | chr3_4:67311496-67311515 | Msa0515930:three_prime_UTR | 25.0% |
| ! | TTCCATATATTGAAGGAAAA+TGG | + | chr3_4:67311503-67311522 | Msa0515930:three_prime_UTR | 25.0% |
| GAATAAGAAGGGAAAAGAAA+AGG | + | chr3_4:67308423-67308442 | Msa0515930:five_prime_UTR | 30.0% | |
| AAATAAAACAACAGCAACAG+CGG | + | chr3_4:67308535-67308554 | Msa0515930:five_prime_UTR | 30.0% | |
| TATTTATAGGTGCATAGTAC+TGG | - | chr3_4:67308669-67308688 | None:intergenic | 30.0% | |
| ! | TGTCAGTGACCTTTATTTAT+AGG | - | chr3_4:67308682-67308701 | None:intergenic | 30.0% |
| !!! | TTTCTAGCTTTTGCTTTTTC+AGG | + | chr3_4:67308893-67308912 | Msa0515930:intron | 30.0% |
| AAGTAGTATGATATGAAGCA+CGG | - | chr3_4:67309142-67309161 | None:intergenic | 30.0% | |
| TGCATTGCAGTGATTTAATA+TGG | + | chr3_4:67309488-67309507 | Msa0515930:intron | 30.0% | |
| TCAGTCAAGATTCTCTATTA+AGG | + | chr3_4:67309896-67309915 | Msa0515930:CDS | 30.0% | |
| CAGTCAAGATTCTCTATTAA+GGG | + | chr3_4:67309897-67309916 | Msa0515930:CDS | 30.0% | |
| AGAATACAAACTTTGTCAAG+AGG | - | chr3_4:67310014-67310033 | None:intergenic | 30.0% | |
| GAATTAGGAAAACATAGACT+CGG | - | chr3_4:67310101-67310120 | None:intergenic | 30.0% | |
| ! | TTTGGTTTAAAAAGAAGAGC+AGG | - | chr3_4:67310324-67310343 | None:intergenic | 30.0% |
| ! | TTCAATCTTAAAGCATTTGG+TGG | - | chr3_4:67310448-67310467 | None:intergenic | 30.0% |
| CTAAGAAAAACAACAAGTCA+AGG | - | chr3_4:67310890-67310909 | None:intergenic | 30.0% | |
| !!! | CTTGACTTGTTGTTTTTCTT+AGG | + | chr3_4:67310888-67310907 | Msa0515930:intron | 30.0% |
| !!! | TTGTTGTTTTTCTTAGGGTT+GGG | + | chr3_4:67310894-67310913 | Msa0515930:intron | 30.0% |
| TGAAATGCATCATCTTTGTT+TGG | - | chr3_4:67310943-67310962 | None:intergenic | 30.0% | |
| TTGAATGAAAGGACTCTTAA+GGG | + | chr3_4:67310982-67311001 | Msa0515930:CDS | 30.0% | |
| TTCAACAACATTAGGAAGAT+CGG | - | chr3_4:67311037-67311056 | None:intergenic | 30.0% | |
| ! | GCTTTGTTAATCTCTGAAAA+TGG | - | chr3_4:67311216-67311235 | None:intergenic | 30.0% |
| !! | CTTTTGATTACATGCTGAAA+GGG | + | chr3_4:67311235-67311254 | Msa0515930:CDS | 30.0% |
| !! | TTTTGATTACATGCTGAAAG+GGG | + | chr3_4:67311236-67311255 | Msa0515930:CDS | 30.0% |
| CAGAAACTCAATAATCCAAA+AGG | - | chr3_4:67311384-67311403 | None:intergenic | 30.0% | |
| CATGTAAAGAATTATGCTAC+TGG | + | chr3_4:67311421-67311440 | Msa0515930:three_prime_UTR | 30.0% | |
| !! | AGCCATTTTCCTTCAATATA+TGG | - | chr3_4:67311508-67311527 | None:intergenic | 30.0% |
| !!! | GTTGTTTTATTTCCAACCAG+CGG | - | chr3_4:67308527-67308546 | None:intergenic | 35.0% |
| !!! | TACTACCACTTTGGTTTTGT+GGG | - | chr3_4:67308564-67308583 | None:intergenic | 35.0% |
| !!! | ATACTACCACTTTGGTTTTG+TGG | - | chr3_4:67308565-67308584 | None:intergenic | 35.0% |
| GAAGTATGTTAGTGCTTCAT+AGG | - | chr3_4:67309013-67309032 | None:intergenic | 35.0% | |
| GCACTAACATACTTCAGATT+AGG | + | chr3_4:67309018-67309037 | Msa0515930:intron | 35.0% | |
| TCAATGAAATCATTTGCGTC+AGG | - | chr3_4:67309057-67309076 | None:intergenic | 35.0% | |
| ! | TGAATCCCTTGATTGTGTTT+TGG | + | chr3_4:67309168-67309187 | Msa0515930:intron | 35.0% |
| TGGTTCCAAAACACAATCAA+GGG | - | chr3_4:67309176-67309195 | None:intergenic | 35.0% | |
| GTAAACATCAGTGTGACAAA+GGG | - | chr3_4:67309299-67309318 | None:intergenic | 35.0% | |
| AGTAAACATCAGTGTGACAA+AGG | - | chr3_4:67309300-67309319 | None:intergenic | 35.0% | |
| TCACACTGATGTTTACTTCT+GGG | + | chr3_4:67309303-67309322 | Msa0515930:CDS | 35.0% | |
| !! | GGTTCTGTTTGTTTTCTTCA+AGG | + | chr3_4:67309449-67309468 | Msa0515930:intron | 35.0% |
| CCAAATATACGAGGAAACAA+TGG | - | chr3_4:67309547-67309566 | None:intergenic | 35.0% | |
| CCATTGTTTCCTCGTATATT+TGG | + | chr3_4:67309544-67309563 | Msa0515930:CDS | 35.0% | |
| TGATCTTCTTAGGATCAACA+CGG | + | chr3_4:67309848-67309867 | Msa0515930:CDS | 35.0% | |
| !! | GTTGATTTTTGCAACACATC+CGG | - | chr3_4:67309982-67310001 | None:intergenic | 35.0% |
| AAAGTTTGTATTCTCAGCTG+TGG | + | chr3_4:67310020-67310039 | Msa0515930:CDS | 35.0% | |
| GCATGGAAGCAAATTGAATT+AGG | - | chr3_4:67310116-67310135 | None:intergenic | 35.0% | |
| ATTTGCTTCCATGCTTCTAT+AGG | + | chr3_4:67310122-67310141 | Msa0515930:intron | 35.0% | |
| AATGTTGCTAAACCAAAACC+CGG | + | chr3_4:67310161-67310180 | Msa0515930:CDS | 35.0% | |
| AAAGATAGCAACAGATGAAC+CGG | - | chr3_4:67310183-67310202 | None:intergenic | 35.0% | |
| AGAAGAGCAGGAGTTAATAA+TGG | - | chr3_4:67310312-67310331 | None:intergenic | 35.0% | |
| GCGTTGTACCTAATTCATAT+CGG | - | chr3_4:67310415-67310434 | None:intergenic | 35.0% | |
| ACAGGTTTGTCATGATCTTT+CGG | - | chr3_4:67310570-67310589 | None:intergenic | 35.0% | |
| !! | GTTGAACTAACTTGTTGAAC+AGG | - | chr3_4:67310588-67310607 | None:intergenic | 35.0% |
| CAGAAAATGCATAGAAATCG+TGG | - | chr3_4:67310610-67310629 | None:intergenic | 35.0% | |
| GTAATTGCTGAAATGACCAA+CGG | + | chr3_4:67310715-67310734 | Msa0515930:CDS | 35.0% | |
| !! | ATTTTGTTTAGCGTACATCG+TGG | - | chr3_4:67310807-67310826 | None:intergenic | 35.0% |
| !!! | CTTGTTGTTTTTCTTAGGGT+TGG | + | chr3_4:67310893-67310912 | Msa0515930:intron | 35.0% |
| !!! | TGTTGTTTTTCTTAGGGTTG+GGG | + | chr3_4:67310895-67310914 | Msa0515930:intron | 35.0% |
| GTTGAATGAAAGGACTCTTA+AGG | + | chr3_4:67310981-67311000 | Msa0515930:CDS | 35.0% | |
| !!! | ACTCTTAAGGGTACCTTTTA+TGG | + | chr3_4:67310994-67311013 | Msa0515930:CDS | 35.0% |
| GGGTTTGTAGTTTCCATAAA+AGG | - | chr3_4:67311010-67311029 | None:intergenic | 35.0% | |
| TACTGTGATATTACAGGAAC+TGG | + | chr3_4:67311161-67311180 | Msa0515930:intron | 35.0% | |
| !! | GCTTTTGATTACATGCTGAA+AGG | + | chr3_4:67311234-67311253 | Msa0515930:CDS | 35.0% |
| CATTCGTATGATACATCTGA+TGG | - | chr3_4:67311265-67311284 | None:intergenic | 35.0% | |
| CATCAGATGTATCATACGAA+TGG | + | chr3_4:67311263-67311282 | Msa0515930:CDS | 35.0% | |
| AGTCGAAAACCAGCTTATGT+CGG | + | chr3_4:67308469-67308488 | Msa0515930:five_prime_UTR | 40.0% | |
| CTGGTTCCAAAACACAATCA+AGG | - | chr3_4:67309177-67309196 | None:intergenic | 40.0% | |
| TCTACTTCTTCCATCACTAG+TGG | - | chr3_4:67309226-67309245 | None:intergenic | 40.0% | |
| ! | ACTAGTGATGGAAGAAGTAG+AGG | + | chr3_4:67309225-67309244 | Msa0515930:CDS | 40.0% |
| !! | AGGTGAAGAGTATCTTGAGA+CGG | - | chr3_4:67309276-67309295 | None:intergenic | 40.0% |
| GTCACACTGATGTTTACTTC+TGG | + | chr3_4:67309302-67309321 | Msa0515930:CDS | 40.0% | |
| ! | TGTTTACTTCTGGGAAGCTA+AGG | + | chr3_4:67309312-67309331 | Msa0515930:CDS | 40.0% |
| GCTTTGATTACATAACACGG+CGG | + | chr3_4:67309338-67309357 | Msa0515930:intron | 40.0% | |
| CTTTGATTACATAACACGGC+GGG | + | chr3_4:67309339-67309358 | Msa0515930:intron | 40.0% | |
| GCTTCATGACCAAATATACG+AGG | - | chr3_4:67309556-67309575 | None:intergenic | 40.0% | |
| CGTATATTTGGTCATGAAGC+TGG | + | chr3_4:67309556-67309575 | Msa0515930:CDS | 40.0% | |
| ATATTTGGTCATGAAGCTGG+AGG | + | chr3_4:67309559-67309578 | Msa0515930:CDS | 40.0% | |
| TATTTGGTCATGAAGCTGGA+GGG | + | chr3_4:67309560-67309579 | Msa0515930:CDS | 40.0% | |
| TCTAATGTCGATCAGGATTG+TGG | + | chr3_4:67309713-67309732 | Msa0515930:intron | 40.0% | |
| ! | GTGTGACAGATCTAAAACCA+GGG | + | chr3_4:67309751-67309770 | Msa0515930:CDS | 40.0% |
| ! | TGTGACAGATCTAAAACCAG+GGG | + | chr3_4:67309752-67309771 | Msa0515930:CDS | 40.0% |
| GCAACATGTGTGATCTTCTT+AGG | + | chr3_4:67309838-67309857 | Msa0515930:CDS | 40.0% | |
| ! | ATGTAGATGTACCGACGAAA+TGG | - | chr3_4:67309935-67309954 | None:intergenic | 40.0% |
| TTCCATGCTTCTATAGGTCT+TGG | + | chr3_4:67310128-67310147 | Msa0515930:intron | 40.0% | |
| AAGATAGCAACAGATGAACC+GGG | - | chr3_4:67310182-67310201 | None:intergenic | 40.0% | |
| GGTTCATCTGTTGCTATCTT+TGG | + | chr3_4:67310182-67310201 | Msa0515930:CDS | 40.0% | |
| TCTGTTGCTATCTTTGGACT+TGG | + | chr3_4:67310188-67310207 | Msa0515930:CDS | 40.0% | |
| TACAAGAGTAACATACCGCA+AGG | - | chr3_4:67310223-67310242 | None:intergenic | 40.0% | |
| ACCAAAATTTAGGCTGCTGA+AGG | + | chr3_4:67310338-67310357 | Msa0515930:intron | 40.0% | |
| CCAAAATTTAGGCTGCTGAA+GGG | + | chr3_4:67310339-67310358 | Msa0515930:intron | 40.0% | |
| CAAAATTTAGGCTGCTGAAG+GGG | + | chr3_4:67310340-67310359 | Msa0515930:intron | 40.0% | |
| TCTGGTGCATCAAGAATCAT+TGG | + | chr3_4:67310371-67310390 | Msa0515930:CDS | 40.0% | |
| GTTTCCAGCCGATATGAATT+AGG | + | chr3_4:67310404-67310423 | Msa0515930:CDS | 40.0% | |
| TGTACCTAATTCATATCGGC+TGG | - | chr3_4:67310411-67310430 | None:intergenic | 40.0% | |
| TTGTTGGCAGCTAAGAAGTT+TGG | + | chr3_4:67310525-67310544 | Msa0515930:intron | 40.0% | |
| TGTTGGCAGCTAAGAAGTTT+GGG | + | chr3_4:67310526-67310545 | Msa0515930:intron | 40.0% | |
| CAGGTTTGTCATGATCTTTC+GGG | - | chr3_4:67310569-67310588 | None:intergenic | 40.0% | |
| GGAGATTGAGATGTGAACAT+TGG | + | chr3_4:67310685-67310704 | Msa0515930:intron | 40.0% | |
| !! | AGATGTGAACATTGGTTTGC+AGG | + | chr3_4:67310693-67310712 | Msa0515930:intron | 40.0% |
| CATCGAATCATGCACTGTTA+AGG | + | chr3_4:67311085-67311104 | Msa0515930:intron | 40.0% | |
| GATATTACAGGAACTGGAAC+TGG | + | chr3_4:67311167-67311186 | Msa0515930:intron | 40.0% | |
| CAGATGTATCATACGAATGG+AGG | + | chr3_4:67311266-67311285 | Msa0515930:CDS | 40.0% | |
| ATCAAGCTACCGACATAAGC+TGG | - | chr3_4:67308481-67308500 | None:intergenic | 45.0% | |
| AGCTTATGTCGGTAGCTTGA+TGG | + | chr3_4:67308480-67308499 | Msa0515930:five_prime_UTR | 45.0% | |
| ATGGCAAAGTCAAAGCCCAA+AGG | + | chr3_4:67308499-67308518 | Msa0515930:five_prime_UTR | 45.0% | |
| GGTATCCCACAAAACCAAAG+TGG | + | chr3_4:67308556-67308575 | Msa0515930:five_prime_UTR | 45.0% | |
| !! | TGCATAGTACTGGCACTAGT+GGG | - | chr3_4:67308659-67308678 | None:intergenic | 45.0% |
| TACTCGTGTTGTGTTGTCTG+TGG | - | chr3_4:67308716-67308735 | None:intergenic | 45.0% | |
| TTAACCATGTCCAACACTGC+TGG | + | chr3_4:67308811-67308830 | Msa0515930:exon | 45.0% | |
| GGTCAGATCATCAAGTGTAG+AGG | + | chr3_4:67308832-67308851 | Msa0515930:CDS | 45.0% | |
| TATGAAGCACGGATACACAC+CGG | - | chr3_4:67309131-67309150 | None:intergenic | 45.0% | |
| !!! | TTGTGTTTTGGAACCAGCTG+CGG | + | chr3_4:67309180-67309199 | Msa0515930:intron | 45.0% |
| ! | AGTGATGGAAGAAGTAGAGG+TGG | + | chr3_4:67309228-67309247 | Msa0515930:CDS | 45.0% |
| ! | TATCTTGAGACGGACTTCAC+CGG | - | chr3_4:67309266-67309285 | None:intergenic | 45.0% |
| AACATCAGTGTGACAAAGGG+AGG | - | chr3_4:67309296-67309315 | None:intergenic | 45.0% | |
| TTGTGGGTCTAATGTCGATC+AGG | + | chr3_4:67309706-67309725 | Msa0515930:intron | 45.0% | |
| ! | GGTGTGACAGATCTAAAACC+AGG | + | chr3_4:67309750-67309769 | Msa0515930:CDS | 45.0% |
| CTGTCCACATTGTAAGTCAG+AGG | + | chr3_4:67309812-67309831 | Msa0515930:CDS | 45.0% | |
| CTCTCCTCTGACTTACAATG+TGG | - | chr3_4:67309819-67309838 | None:intergenic | 45.0% | |
| TTCTTAGGATCAACACGGAC+AGG | + | chr3_4:67309853-67309872 | Msa0515930:CDS | 45.0% | |
| TCTTAGGATCAACACGGACA+GGG | + | chr3_4:67309854-67309873 | Msa0515930:CDS | 45.0% | |
| ! | GTACCGACGAAATGGTGAAT+CGG | - | chr3_4:67309927-67309946 | None:intergenic | 45.0% |
| TACATTCAGCGAGTACACTG+TGG | + | chr3_4:67309950-67309969 | Msa0515930:CDS | 45.0% | |
| ! | CTTTGTCAAGAGGTGCATCA+GGG | - | chr3_4:67310004-67310023 | None:intergenic | 45.0% |
| ! | ACTTTGTCAAGAGGTGCATC+AGG | - | chr3_4:67310005-67310024 | None:intergenic | 45.0% |
| CACCAAGACCTATAGAAGCA+TGG | - | chr3_4:67310133-67310152 | None:intergenic | 45.0% | |
| ATCTTTGGACTTGGAGCTGT+TGG | + | chr3_4:67310197-67310216 | Msa0515930:CDS | 45.0% | |
| AACATGCGCATACACACTCA+AGG | - | chr3_4:67310246-67310265 | None:intergenic | 45.0% | |
| ! | CCCTTCAGCAGCCTAAATTT+TGG | - | chr3_4:67310342-67310361 | None:intergenic | 45.0% |
| GTTGGCAGCTAAGAAGTTTG+GGG | + | chr3_4:67310527-67310546 | Msa0515930:intron | 45.0% | |
| ATTGCTGAAATGACCAACGG+AGG | + | chr3_4:67310718-67310737 | Msa0515930:CDS | 45.0% | |
| ! | GATCGTGCTGTTGAATGTAC+CGG | + | chr3_4:67310745-67310764 | Msa0515930:CDS | 45.0% |
| ! | ATCGTGCTGTTGAATGTACC+GGG | + | chr3_4:67310746-67310765 | Msa0515930:CDS | 45.0% |
| ACATTCGAATGCGGAGATCA+TGG | - | chr3_4:67310782-67310801 | None:intergenic | 45.0% | |
| ATCGTGGACACATTCGAATG+CGG | - | chr3_4:67310791-67310810 | None:intergenic | 45.0% | |
| AACATTAGGAAGATCGGTGC+GGG | - | chr3_4:67311031-67311050 | None:intergenic | 45.0% | |
| CAACATTAGGAAGATCGGTG+CGG | - | chr3_4:67311032-67311051 | None:intergenic | 45.0% | |
| CGAATCATGCACTGTTAAGG+AGG | + | chr3_4:67311088-67311107 | Msa0515930:intron | 45.0% | |
| !! | GTGCATAGTACTGGCACTAG+TGG | - | chr3_4:67308660-67308679 | None:intergenic | 50.0% |
| GATGATCTGACCAGCAGTGT+TGG | - | chr3_4:67308824-67308843 | None:intergenic | 50.0% | |
| GATACACACCGGACACAACA+TGG | - | chr3_4:67309120-67309139 | None:intergenic | 50.0% | |
| GGAGTCTGACCCTGAAACAA+AGG | - | chr3_4:67309526-67309545 | None:intergenic | 50.0% | |
| ! | ATCAGGATTGTGGAGAGCGT+AGG | + | chr3_4:67309723-67309742 | Msa0515930:intron | 50.0% |
| ATGCCCTGCCTGTATTCACA+GGG | + | chr3_4:67309778-67309797 | Msa0515930:CDS | 50.0% | |
| ! | CTGTATTCACAGGGGAGTGT+GGG | + | chr3_4:67309787-67309806 | Msa0515930:CDS | 50.0% |
| ! | TGTATTCACAGGGGAGTGTG+GGG | + | chr3_4:67309788-67309807 | Msa0515930:CDS | 50.0% |
| CTTAGGATCAACACGGACAG+GGG | + | chr3_4:67309855-67309874 | Msa0515930:CDS | 50.0% | |
| ! | CAGCCGATTCACCATTTCGT+CGG | + | chr3_4:67309921-67309940 | Msa0515930:CDS | 50.0% |
| GAGTACACTGTGGTTCATGC+CGG | + | chr3_4:67309960-67309979 | Msa0515930:CDS | 50.0% | |
| CTCAGCTGTGGAATATGCAC+AGG | + | chr3_4:67310032-67310051 | Msa0515930:CDS | 50.0% | |
| ! | GCAACAGATGAACCGGGTTT+TGG | - | chr3_4:67310176-67310195 | None:intergenic | 50.0% |
| TGAAATGACCAACGGAGGTG+TGG | + | chr3_4:67310723-67310742 | Msa0515930:CDS | 50.0% | |
| !! | TTGGGGTGTTGCTGTACTTG+TGG | + | chr3_4:67310912-67310931 | Msa0515930:CDS | 50.0% |
| !! | TGGGGTGTTGCTGTACTTGT+GGG | + | chr3_4:67310913-67310932 | Msa0515930:CDS | 50.0% |
| ACATTAGGAAGATCGGTGCG+GGG | - | chr3_4:67311030-67311049 | None:intergenic | 50.0% | |
| ! | CTGACCAGCAGTGTTGGACA+TGG | - | chr3_4:67308818-67308837 | None:intergenic | 55.0% |
| CGGTGTGTCCATGTTGTGTC+CGG | + | chr3_4:67309109-67309128 | Msa0515930:intron | 55.0% | |
| ! | ATTGTGGAGAGCGTAGGCGA+GGG | + | chr3_4:67309729-67309748 | Msa0515930:CDS | 55.0% |
| CATGCCCTGCCTGTATTCAC+AGG | + | chr3_4:67309777-67309796 | Msa0515930:CDS | 55.0% | |
| TGCCCTGCCTGTATTCACAG+GGG | + | chr3_4:67309779-67309798 | Msa0515930:CDS | 55.0% | |
| CTCCCCTGTGAATACAGGCA+GGG | - | chr3_4:67309784-67309803 | None:intergenic | 55.0% | |
| ACTCCCCTGTGAATACAGGC+AGG | - | chr3_4:67309785-67309804 | None:intergenic | 55.0% | |
| CCACACTCCCCTGTGAATAC+AGG | - | chr3_4:67309789-67309808 | None:intergenic | 55.0% | |
| CCTGTATTCACAGGGGAGTG+TGG | + | chr3_4:67309786-67309805 | Msa0515930:CDS | 55.0% | |
| !! | ACTTGGAGCTGTTGGCCTTG+CGG | + | chr3_4:67310205-67310224 | Msa0515930:CDS | 55.0% |
| TTTAGGCTGCTGAAGGGGCA+AGG | + | chr3_4:67310345-67310364 | Msa0515930:intron | 55.0% | |
| !! | TGAATGTACCGGGAGCATCC+AGG | + | chr3_4:67310756-67310775 | Msa0515930:CDS | 55.0% |
| TTCCAACCAGCGGCGCCTTT+GGG | - | chr3_4:67308517-67308536 | None:intergenic | 60.0% | |
| TTTCCAACCAGCGGCGCCTT+TGG | - | chr3_4:67308518-67308537 | None:intergenic | 60.0% | |
| TGGAACCAGCTGCGGTTGCA+TGG | + | chr3_4:67309188-67309207 | Msa0515930:intron | 60.0% | |
| GGAACCAGCTGCGGTTGCAT+GGG | + | chr3_4:67309189-67309208 | Msa0515930:intron | 60.0% | |
| !! | AGACGGACTTCACCGGCTTG+TGG | - | chr3_4:67309259-67309278 | None:intergenic | 60.0% |
| ! | GATTGTGGAGAGCGTAGGCG+AGG | + | chr3_4:67309728-67309747 | Msa0515930:CDS | 60.0% |
| GCTGAAGGGGCAAGGATGTC+TGG | + | chr3_4:67310353-67310372 | Msa0515930:CDS | 60.0% | |
| AGCACGATCCACACCTCCGT+TGG | - | chr3_4:67310734-67310753 | None:intergenic | 60.0% | |
| GATCATGGCCTGGATGCTCC+CGG | - | chr3_4:67310767-67310786 | None:intergenic | 60.0% | |
| CGAATGCGGAGATCATGGCC+TGG | - | chr3_4:67310777-67310796 | None:intergenic | 60.0% | |
| !! | TCAAAGCCCAAAGGCGCCGC+TGG | + | chr3_4:67308508-67308527 | Msa0515930:five_prime_UTR | 65.0% |
| ACCAGCTGCGGTTGCATGGG+AGG | + | chr3_4:67309192-67309211 | Msa0515930:intron | 65.0% | |
| AGCTGCGGTTGCATGGGAGG+CGG | + | chr3_4:67309195-67309214 | Msa0515930:intron | 65.0% | |
| GGCGGGGAAGCCACTAGTGA+TGG | + | chr3_4:67309213-67309232 | Msa0515930:CDS | 65.0% | |
| !! | CGGACTTCACCGGCTTGTGG+TGG | - | chr3_4:67309256-67309275 | None:intergenic | 65.0% |
| ACAGGCAGGGCATGATCCCC+TGG | - | chr3_4:67309771-67309790 | None:intergenic | 65.0% | |
| !! | AGCCCAAAGGCGCCGCTGGT+TGG | + | chr3_4:67308512-67308531 | Msa0515930:five_prime_UTR | 70.0% |
| GCCTCCCATGCAACCGCAGC+TGG | - | chr3_4:67309196-67309215 | None:intergenic | 70.0% | |
| GCTGCGGTTGCATGGGAGGC+GGG | + | chr3_4:67309196-67309215 | Msa0515930:intron | 70.0% | |
| CTGCGGTTGCATGGGAGGCG+GGG | + | chr3_4:67309197-67309216 | Msa0515930:CDS | 70.0% | |
| GAGGTGGCGCCACCACAAGC+CGG | + | chr3_4:67309244-67309263 | Msa0515930:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 67308361 | 67311538 | 67308361 | ID=Msa0515930;Name=Msa0515930 |
| chr3_4 | mRNA | 67308361 | 67311538 | 67308361 | ID=Msa0515930-mRNA-1;Parent=Msa0515930;Name=Msa0515930-mRNA-1;_AED=0.19;_eAED=0.19;_QI=456|1|1|1|1|1|10|245|380 |
| chr3_4 | exon | 67308361 | 67308853 | 67308361 | ID=Msa0515930-mRNA-1:exon:17505;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67309197 | 67309333 | 67309197 | ID=Msa0515930-mRNA-1:exon:17506;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67309535 | 67309581 | 67309535 | ID=Msa0515930-mRNA-1:exon:17507;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67309728 | 67310053 | 67309728 | ID=Msa0515930-mRNA-1:exon:17508;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67310144 | 67310226 | 67310144 | ID=Msa0515930-mRNA-1:exon:17509;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67310350 | 67310425 | 67310350 | ID=Msa0515930-mRNA-1:exon:17510;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67310535 | 67310596 | 67310535 | ID=Msa0515930-mRNA-1:exon:17511;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67310715 | 67310810 | 67310715 | ID=Msa0515930-mRNA-1:exon:17512;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67310910 | 67311071 | 67310910 | ID=Msa0515930-mRNA-1:exon:17513;Parent=Msa0515930-mRNA-1 |
| chr3_4 | exon | 67311177 | 67311538 | 67311177 | ID=Msa0515930-mRNA-1:exon:17514;Parent=Msa0515930-mRNA-1 |
| chr3_4 | five_prime_UTR | 67308361 | 67308816 | 67308361 | ID=Msa0515930-mRNA-1:five_prime_utr;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67308817 | 67308853 | 67308817 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67309197 | 67309333 | 67309197 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67309535 | 67309581 | 67309535 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67309728 | 67310053 | 67309728 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67310144 | 67310226 | 67310144 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67310350 | 67310425 | 67310350 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67310535 | 67310596 | 67310535 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67310715 | 67310810 | 67310715 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67310910 | 67311071 | 67310910 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | CDS | 67311177 | 67311293 | 67311177 | ID=Msa0515930-mRNA-1:cds;Parent=Msa0515930-mRNA-1 |
| chr3_4 | three_prime_UTR | 67311294 | 67311538 | 67311294 | ID=Msa0515930-mRNA-1:three_prime_utr;Parent=Msa0515930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
