Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854860 | XP_003615999.1 | 94.979 | 239 | 6 | 3 | 1 | 238 | 1 | 234 | 4.66e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854860 | sp|Q9AT61|LBD13_ARATH | 69.182 | 159 | 42 | 4 | 10 | 162 | 10 | 167 | 3.37e-70 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854860 | G7KFM6 | 94.979 | 239 | 6 | 3 | 1 | 238 | 1 | 234 | 2.23e-158 | 447 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0854860 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0854860 | -0.800954 | 1.130810e-48 | -8.615850e-47 |
| Msa0026120 | Msa0854860 | -0.802294 | 6.005785e-49 | -8.615850e-47 |
| Msa0036560 | Msa0854860 | -0.807969 | 3.897626e-50 | -8.615850e-47 |
| Msa0036580 | Msa0854860 | 0.813126 | 2.997241e-51 | -8.615850e-47 |
| Msa0043240 | Msa0854860 | 0.802310 | 5.959855e-49 | -8.615850e-47 |
| Msa0048950 | Msa0854860 | 0.837098 | 6.350113e-57 | -8.615850e-47 |
| Msa0059880 | Msa0854860 | 0.843584 | 1.280777e-58 | -8.615850e-47 |
| Msa0060370 | Msa0854860 | 0.806694 | 7.264563e-50 | -8.615850e-47 |
| Msa0064960 | Msa0854860 | 0.802763 | 4.807079e-49 | -8.615850e-47 |
| Msa0072910 | Msa0854860 | -0.805815 | 1.112581e-49 | -8.615850e-47 |
| Msa0079550 | Msa0854860 | -0.805818 | 1.110756e-49 | -8.615850e-47 |
| Msa0080010 | Msa0854860 | 0.819116 | 1.375030e-52 | -8.615850e-47 |
| Msa0094240 | Msa0854860 | -0.807988 | 3.861935e-50 | -8.615850e-47 |
| Msa0096860 | Msa0854860 | 0.823225 | 1.553631e-53 | -8.615850e-47 |
| Msa0100200 | Msa0854860 | 0.806388 | 8.429589e-50 | -8.615850e-47 |
| Msa0110240 | Msa0854860 | 0.802842 | 4.629575e-49 | -8.615850e-47 |
| Msa0112800 | Msa0854860 | -0.801056 | 1.078096e-48 | -8.615850e-47 |
| Msa0603950 | Msa0854860 | 0.804565 | 2.032202e-49 | -8.615850e-47 |
| Msa0605470 | Msa0854860 | 0.805239 | 1.469701e-49 | -8.615850e-47 |
| Msa0621870 | Msa0854860 | -0.818321 | 2.083780e-52 | -8.615850e-47 |
| Msa0631700 | Msa0854860 | 0.801634 | 8.209470e-49 | -8.615850e-47 |
| Msa0665010 | Msa0854860 | -0.804542 | 2.054959e-49 | -8.615850e-47 |
| Msa0667710 | Msa0854860 | -0.800116 | 1.675843e-48 | -8.615850e-47 |
| Msa0670360 | Msa0854860 | 0.812901 | 3.357622e-51 | -8.615850e-47 |
| Msa0672780 | Msa0854860 | 0.839478 | 1.546663e-57 | -8.615850e-47 |
| Msa0677590 | Msa0854860 | -0.810401 | 1.173953e-50 | -8.615850e-47 |
| Msa0678620 | Msa0854860 | 0.829449 | 5.115958e-55 | -8.615850e-47 |
| Msa0684720 | Msa0854860 | 0.800693 | 1.278841e-48 | -8.615850e-47 |
| Msa0709820 | Msa0854860 | 0.816114 | 6.534457e-52 | -8.615850e-47 |
| Msa0711230 | Msa0854860 | 0.803834 | 2.884981e-49 | -8.615850e-47 |
| Msa0711240 | Msa0854860 | 0.830724 | 2.499852e-55 | -8.615850e-47 |
| Msa0716600 | Msa0854860 | 0.813753 | 2.182484e-51 | -8.615850e-47 |
| Msa0721260 | Msa0854860 | 0.807995 | 3.849475e-50 | -8.615850e-47 |
| Msa0727480 | Msa0854860 | 0.820703 | 5.961952e-53 | -8.615850e-47 |
| Msa0735340 | Msa0854860 | 0.898349 | 5.790541e-77 | -8.615850e-47 |
| Msa0743630 | Msa0854860 | -0.823547 | 1.306058e-53 | -8.615850e-47 |
| Msa0747500 | Msa0854860 | 0.841279 | 5.232544e-58 | -8.615850e-47 |
| Msa0753410 | Msa0854860 | 0.804561 | 2.036072e-49 | -8.615850e-47 |
| Msa0757990 | Msa0854860 | 0.809386 | 1.941701e-50 | -8.615850e-47 |
| Msa0758000 | Msa0854860 | 0.820533 | 6.523152e-53 | -8.615850e-47 |
| Msa0766540 | Msa0854860 | -0.803158 | 3.984548e-49 | -8.615850e-47 |
| Msa0768670 | Msa0854860 | 0.815744 | 7.904060e-52 | -8.615850e-47 |
| Msa0768720 | Msa0854860 | 0.803272 | 3.773640e-49 | -8.615850e-47 |
| Msa0777210 | Msa0854860 | 0.897304 | 1.600835e-76 | -8.615850e-47 |
| Msa0787860 | Msa0854860 | 0.819509 | 1.119083e-52 | -8.615850e-47 |
| Msa0795330 | Msa0854860 | 0.801934 | 7.124302e-49 | -8.615850e-47 |
| Msa0814350 | Msa0854860 | 0.921563 | 3.047396e-88 | -8.615850e-47 |
| Msa0824750 | Msa0854860 | -0.807008 | 6.233258e-50 | -8.615850e-47 |
| Msa0824850 | Msa0854860 | 0.804240 | 2.375931e-49 | -8.615850e-47 |
| Msa0831320 | Msa0854860 | 0.805114 | 1.560494e-49 | -8.615850e-47 |
| Msa0121080 | Msa0854860 | -0.806163 | 9.399312e-50 | -8.615850e-47 |
| Msa0129270 | Msa0854860 | 0.815602 | 8.498589e-52 | -8.615850e-47 |
| Msa0129850 | Msa0854860 | 0.809091 | 2.245357e-50 | -8.615850e-47 |
| Msa0139270 | Msa0854860 | 0.802962 | 4.374388e-49 | -8.615850e-47 |
| Msa0139280 | Msa0854860 | -0.813701 | 2.239959e-51 | -8.615850e-47 |
| Msa0143950 | Msa0854860 | 0.813961 | 1.963551e-51 | -8.615850e-47 |
| Msa0144000 | Msa0854860 | 0.820904 | 5.360929e-53 | -8.615850e-47 |
| Msa0150910 | Msa0854860 | 0.844020 | 9.789565e-59 | -8.615850e-47 |
| Msa0166580 | Msa0854860 | -0.808833 | 2.549984e-50 | -8.615850e-47 |
| Msa0176610 | Msa0854860 | -0.820677 | 6.046270e-53 | -8.615850e-47 |
| Msa0176620 | Msa0854860 | 0.810574 | 1.077336e-50 | -8.615850e-47 |
| Msa0182310 | Msa0854860 | 0.804205 | 2.415692e-49 | -8.615850e-47 |
| Msa0186380 | Msa0854860 | -0.818823 | 1.602882e-52 | -8.615850e-47 |
| Msa0190400 | Msa0854860 | -0.800192 | 1.617292e-48 | -8.615850e-47 |
| Msa0192890 | Msa0854860 | 0.810964 | 8.872789e-51 | -8.615850e-47 |
| Msa0194870 | Msa0854860 | -0.811894 | 5.572018e-51 | -8.615850e-47 |
| Msa0194900 | Msa0854860 | -0.813442 | 2.554112e-51 | -8.615850e-47 |
| Msa0197750 | Msa0854860 | 0.804697 | 1.907691e-49 | -8.615850e-47 |
| Msa0201910 | Msa0854860 | -0.820305 | 7.356289e-53 | -8.615850e-47 |
| Msa0206600 | Msa0854860 | -0.803729 | 3.033548e-49 | -8.615850e-47 |
| Msa0219810 | Msa0854860 | 0.813481 | 2.504320e-51 | -8.615850e-47 |
| Msa0223050 | Msa0854860 | 0.801977 | 6.978908e-49 | -8.615850e-47 |
| Msa0235020 | Msa0854860 | 0.812323 | 4.490915e-51 | -8.615850e-47 |
| Msa0238420 | Msa0854860 | 0.810732 | 9.960245e-51 | -8.615850e-47 |
| Msa0368620 | Msa0854860 | 0.807061 | 6.076523e-50 | -8.615850e-47 |
| Msa0369660 | Msa0854860 | 0.825045 | 5.806752e-54 | -8.615850e-47 |
| Msa0372250 | Msa0854860 | -0.820432 | 6.881888e-53 | -8.615850e-47 |
| Msa0375500 | Msa0854860 | 0.808838 | 2.543438e-50 | -8.615850e-47 |
| Msa0385870 | Msa0854860 | -0.822540 | 2.242711e-53 | -8.615850e-47 |
| Msa0386390 | Msa0854860 | -0.807557 | 4.769537e-50 | -8.615850e-47 |
| Msa0389710 | Msa0854860 | 0.802497 | 5.456460e-49 | -8.615850e-47 |
| Msa0405040 | Msa0854860 | -0.800562 | 1.360054e-48 | -8.615850e-47 |
| Msa0417060 | Msa0854860 | 0.814400 | 1.570815e-51 | -8.615850e-47 |
| Msa0421100 | Msa0854860 | -0.805370 | 1.379416e-49 | -8.615850e-47 |
| Msa0423690 | Msa0854860 | 0.803042 | 4.209314e-49 | -8.615850e-47 |
| Msa0424300 | Msa0854860 | 0.835172 | 1.958939e-56 | -8.615850e-47 |
| Msa0432390 | Msa0854860 | -0.809522 | 1.815599e-50 | -8.615850e-47 |
| Msa0434890 | Msa0854860 | 0.802252 | 6.126709e-49 | -8.615850e-47 |
| Msa0445530 | Msa0854860 | 0.807848 | 4.135543e-50 | -8.615850e-47 |
| Msa0453310 | Msa0854860 | -0.807248 | 5.544824e-50 | -8.615850e-47 |
| Msa0463890 | Msa0854860 | 0.818891 | 1.546920e-52 | -8.615850e-47 |
| Msa0465420 | Msa0854860 | 0.803135 | 4.028684e-49 | -8.615850e-47 |
| Msa0471210 | Msa0854860 | 0.827435 | 1.566869e-54 | -8.615850e-47 |
| Msa0479790 | Msa0854860 | -0.806639 | 7.462116e-50 | -8.615850e-47 |
| Msa0480260 | Msa0854860 | 0.806063 | 9.864792e-50 | -8.615850e-47 |
| Msa0244370 | Msa0854860 | -0.806757 | 7.045858e-50 | -8.615850e-47 |
| Msa0249670 | Msa0854860 | -0.806406 | 8.353025e-50 | -8.615850e-47 |
| Msa0266650 | Msa0854860 | 0.802574 | 5.258610e-49 | -8.615850e-47 |
| Msa0273420 | Msa0854860 | 0.815201 | 1.043720e-51 | -8.615850e-47 |
| Msa0282880 | Msa0854860 | -0.808039 | 3.766153e-50 | -8.615850e-47 |
| Msa0288270 | Msa0854860 | -0.800884 | 1.168843e-48 | -8.615850e-47 |
| Msa0297950 | Msa0854860 | 0.812541 | 4.024648e-51 | -8.615850e-47 |
| Msa0302220 | Msa0854860 | 0.808226 | 3.437278e-50 | -8.615850e-47 |
| Msa0309490 | Msa0854860 | -0.802896 | 4.513411e-49 | -8.615850e-47 |
| Msa0313680 | Msa0854860 | 0.814672 | 1.367728e-51 | -8.615850e-47 |
| Msa0315390 | Msa0854860 | -0.800012 | 1.759438e-48 | -8.615850e-47 |
| Msa0321200 | Msa0854860 | -0.803335 | 3.661050e-49 | -8.615850e-47 |
| Msa0351600 | Msa0854860 | -0.809731 | 1.636838e-50 | -8.615850e-47 |
| Msa0488900 | Msa0854860 | -0.821022 | 5.034695e-53 | -8.615850e-47 |
| Msa0493710 | Msa0854860 | 0.802269 | 6.077746e-49 | -8.615850e-47 |
| Msa0498320 | Msa0854860 | -0.821675 | 3.559591e-53 | -8.615850e-47 |
| Msa0515930 | Msa0854860 | 0.832856 | 7.446140e-56 | -8.615850e-47 |
| Msa0523400 | Msa0854860 | -0.812259 | 4.637939e-51 | -8.615850e-47 |
| Msa0535570 | Msa0854860 | 0.809784 | 1.594565e-50 | -8.615850e-47 |
| Msa0538520 | Msa0854860 | 0.800382 | 1.479882e-48 | -8.615850e-47 |
| Msa0538650 | Msa0854860 | 0.821573 | 3.758820e-53 | -8.615850e-47 |
| Msa0543310 | Msa0854860 | -0.805253 | 1.459745e-49 | -8.615850e-47 |
| Msa0547780 | Msa0854860 | -0.812192 | 4.796912e-51 | -8.615850e-47 |
| Msa0548970 | Msa0854860 | 0.808220 | 3.447180e-50 | -8.615850e-47 |
| Msa0565930 | Msa0854860 | -0.801285 | 9.679677e-49 | -8.615850e-47 |
| Msa0587060 | Msa0854860 | -0.808004 | 3.832092e-50 | -8.615850e-47 |
| Msa0589740 | Msa0854860 | 0.810696 | 1.013843e-50 | -8.615850e-47 |
| Msa0592020 | Msa0854860 | 0.808521 | 2.973990e-50 | -8.615850e-47 |
| Msa0594470 | Msa0854860 | 0.800530 | 1.380256e-48 | -8.615850e-47 |
| Msa0598610 | Msa0854860 | -0.823355 | 1.448242e-53 | -8.615850e-47 |
| Msa0598680 | Msa0854860 | -0.807463 | 4.993388e-50 | -8.615850e-47 |
| Msa0846180 | Msa0854860 | -0.803653 | 3.146157e-49 | -8.615850e-47 |
| Msa0847140 | Msa0854860 | 0.814099 | 1.830779e-51 | -8.615850e-47 |
| Msa0854860 | Msa0863780 | -0.814402 | 1.568721e-51 | -8.615850e-47 |
| Msa0854860 | Msa0864160 | 0.813341 | 2.688406e-51 | -8.615850e-47 |
| Msa0854860 | Msa0883640 | 0.844345 | 8.009338e-59 | -8.615850e-47 |
| Msa0854860 | Msa0886370 | 0.811875 | 5.624366e-51 | -8.615850e-47 |
| Msa0854860 | Msa0890210 | 0.805379 | 1.373256e-49 | -8.615850e-47 |
| Msa0854860 | Msa0896920 | 0.812642 | 3.826614e-51 | -8.615850e-47 |
| Msa0854860 | Msa0896990 | 0.842349 | 2.729826e-58 | -8.615850e-47 |
| Msa0854860 | Msa0902340 | 0.846652 | 1.898874e-59 | -8.615850e-47 |
| Msa0854860 | Msa0907520 | -0.800052 | 1.726881e-48 | -8.615850e-47 |
| Msa0854860 | Msa0910590 | 0.802728 | 4.887782e-49 | -8.615850e-47 |
| Msa0854860 | Msa0910830 | 0.855188 | 7.459447e-62 | -8.615850e-47 |
| Msa0854860 | Msa0932040 | -0.802558 | 5.300059e-49 | -8.615850e-47 |
| Msa0854860 | Msa0947420 | 0.803863 | 2.845336e-49 | -8.615850e-47 |
| Msa0854860 | Msa0951060 | 0.828045 | 1.117917e-54 | -8.615850e-47 |
| Msa0854860 | Msa0960090 | 0.845142 | 4.882999e-59 | -8.615850e-47 |
| Msa0854860 | Msa0962260 | 0.849282 | 3.573111e-60 | -8.615850e-47 |
| Msa0854860 | Msa0967450 | -0.806153 | 9.445249e-50 | -8.615850e-47 |
| Msa0854860 | Msa0985700 | 0.845033 | 5.227500e-59 | -8.615850e-47 |
| Msa0854860 | Msa0987550 | 0.822125 | 2.799749e-53 | -8.615850e-47 |
| Msa0854860 | Msa0996940 | 0.840563 | 8.066516e-58 | -8.615850e-47 |
| Msa0854860 | Msa1007160 | 0.800080 | 1.704635e-48 | -8.615850e-47 |
| Msa0854860 | Msa1014530 | -0.814089 | 1.840167e-51 | -8.615850e-47 |
| Msa0854860 | Msa1020540 | 0.803894 | 2.803180e-49 | -8.615850e-47 |
| Msa0854860 | Msa1021620 | 0.825122 | 5.567089e-54 | -8.615850e-47 |
| Msa0854860 | Msa1026050 | 0.800178 | 1.628268e-48 | -8.615850e-47 |
| Msa0854860 | Msa1036590 | 0.823555 | 1.300776e-53 | -8.615850e-47 |
| Msa0854860 | Msa1041620 | -0.829810 | 4.178577e-55 | -8.615850e-47 |
| Msa0854860 | Msa1046220 | 0.816110 | 6.548829e-52 | -8.615850e-47 |
| Msa0854860 | Msa1055490 | -0.805696 | 1.178256e-49 | -8.615850e-47 |
| Msa0854860 | Msa1061670 | 0.808001 | 3.838616e-50 | -8.615850e-47 |
| Msa0854860 | Msa1064940 | 0.809345 | 1.981509e-50 | -8.615850e-47 |
| Msa0854860 | Msa1074490 | 0.810365 | 1.195270e-50 | -8.615850e-47 |
| Msa0854860 | Msa1076830 | 0.810646 | 1.039434e-50 | -8.615850e-47 |
| Msa0854860 | Msa1076900 | 0.826790 | 2.235821e-54 | -8.615850e-47 |
| Msa0854860 | Msa1077940 | 0.816602 | 5.081107e-52 | -8.615850e-47 |
| Msa0854860 | Msa1087380 | 0.817031 | 4.071831e-52 | -8.615850e-47 |
| Msa0854860 | Msa1096280 | -0.808225 | 3.437670e-50 | -8.615850e-47 |
| Msa0854860 | Msa1098470 | -0.811417 | 7.074806e-51 | -8.615850e-47 |
| Msa0854860 | Msa1106960 | 0.802426 | 5.640992e-49 | -8.615850e-47 |
| Msa0854860 | Msa1109880 | 0.817775 | 2.768227e-52 | -8.615850e-47 |
| Msa0854860 | Msa1109890 | 0.838565 | 2.667133e-57 | -8.615850e-47 |
| Msa0854860 | Msa1110040 | 0.803034 | 4.225778e-49 | -8.615850e-47 |
| Msa0854860 | Msa1112040 | 0.801821 | 7.514369e-49 | -8.615850e-47 |
| Msa0854860 | Msa1130070 | -0.804109 | 2.529573e-49 | -8.615850e-47 |
| Msa0854860 | Msa1138110 | 0.801724 | 7.866565e-49 | -8.615850e-47 |
| Msa0854860 | Msa1149020 | 0.821361 | 4.205601e-53 | -8.615850e-47 |
| Msa0854860 | Msa1163710 | 0.800296 | 1.540512e-48 | -8.615850e-47 |
| Msa0854860 | Msa1166520 | -0.826333 | 2.873633e-54 | -8.615850e-47 |
| Msa0854860 | Msa1173290 | 0.811870 | 5.637994e-51 | -8.615850e-47 |
| Msa0854860 | Msa1174450 | 0.819273 | 1.266185e-52 | -8.615850e-47 |
| Msa0854860 | Msa1182530 | -0.805341 | 1.399164e-49 | -8.615850e-47 |
| Msa0854860 | Msa1187160 | 0.816413 | 5.600276e-52 | -8.615850e-47 |
| Msa0854860 | Msa1203090 | -0.802159 | 6.402711e-49 | -8.615850e-47 |
| Msa0854860 | Msa1214960 | 0.835114 | 2.025968e-56 | -8.615850e-47 |
| Msa0854860 | Msa1219780 | 0.817313 | 3.517832e-52 | -8.615850e-47 |
| Msa0854860 | Msa1221170 | 0.806562 | 7.746646e-50 | -8.615850e-47 |
| Msa0854860 | Msa1221570 | 0.802936 | 4.428075e-49 | -8.615850e-47 |
| Msa0854860 | Msa1223600 | -0.816109 | 6.549668e-52 | -8.615850e-47 |
| Msa0854860 | Msa1224310 | -0.801110 | 1.050893e-48 | -8.615850e-47 |
| Msa0854860 | Msa1229880 | -0.807630 | 4.601807e-50 | -8.615850e-47 |
| Msa0854860 | Msa1235770 | -0.806625 | 7.512960e-50 | -8.615850e-47 |
| Msa0854860 | Msa1258600 | 0.809789 | 1.590199e-50 | -8.615850e-47 |
| Msa0854860 | Msa1263370 | 0.810513 | 1.110638e-50 | -8.615850e-47 |
| Msa0854860 | Msa1265500 | 0.812976 | 3.231994e-51 | -8.615850e-47 |
| Msa0854860 | Msa1265990 | -0.819732 | 9.951809e-53 | -8.615850e-47 |
| Msa0854860 | Msa1266710 | 0.817274 | 3.591005e-52 | -8.615850e-47 |
| Msa0854860 | Msa1286420 | 0.801423 | 9.067392e-49 | -8.615850e-47 |
| Msa0854860 | Msa1298440 | 0.812125 | 4.962345e-51 | -8.615850e-47 |
| Msa0854860 | Msa1303130 | -0.800451 | 1.432218e-48 | -8.615850e-47 |
| Msa0854860 | Msa1310620 | -0.812451 | 4.211047e-51 | -8.615850e-47 |
| Msa0854860 | Msa1314810 | 0.813681 | 2.263512e-51 | -8.615850e-47 |
| Msa0854860 | Msa1319440 | -0.824382 | 8.319723e-54 | -8.615850e-47 |
| Msa0854860 | Msa1323030 | 0.802136 | 6.472809e-49 | -8.615850e-47 |
| Msa0854860 | Msa1335500 | 0.801500 | 8.742634e-49 | -8.615850e-47 |
| Msa0854860 | Msa1350350 | -0.803455 | 3.457065e-49 | -8.615850e-47 |
| Msa0854860 | Msa1354210 | -0.809460 | 1.871709e-50 | -8.615850e-47 |
| Msa0854860 | Msa1356500 | -0.803897 | 2.799744e-49 | -8.615850e-47 |
| Msa0854860 | Msa1356730 | -0.802220 | 6.220239e-49 | -8.615850e-47 |
| Msa0854860 | Msa1359520 | 0.807231 | 5.590760e-50 | -8.615850e-47 |
| Msa0854860 | Msa1361090 | -0.808967 | 2.387636e-50 | -8.615850e-47 |
| Msa0854860 | Msa1362520 | 0.800834 | 1.196860e-48 | -8.615850e-47 |
| Msa0854860 | Msa1373560 | 0.819345 | 1.219802e-52 | -8.615850e-47 |
| Msa0854860 | Msa1376070 | 0.814028 | 1.897413e-51 | -8.615850e-47 |
| Msa0854860 | Msa1376520 | 0.836783 | 7.643334e-57 | -8.615850e-47 |
| Msa0854860 | Msa1377460 | 0.826697 | 2.353113e-54 | -8.615850e-47 |
| Msa0854860 | Msa1384980 | -0.810605 | 1.060971e-50 | -8.615850e-47 |
| Msa0854860 | Msa1390040 | 0.830914 | 2.245532e-55 | -8.615850e-47 |
| Msa0854860 | Msa1395150 | 0.802785 | 4.756832e-49 | -8.615850e-47 |
| Msa0854860 | Msa1395690 | 0.805564 | 1.256354e-49 | -8.615850e-47 |
| Msa0854860 | Msa1395700 | -0.812482 | 4.145872e-51 | -8.615850e-47 |
| Msa0854860 | Msa1398110 | 0.803095 | 4.105943e-49 | -8.615850e-47 |
| Msa0854860 | Msa1400940 | 0.814647 | 1.384817e-51 | -8.615850e-47 |
| Msa0854860 | Msa1402000 | 0.810110 | 1.356655e-50 | -8.615850e-47 |
| Msa0854860 | Msa1407210 | 0.815897 | 7.305236e-52 | -8.615850e-47 |
| Msa0854860 | Msa1409060 | 0.817889 | 2.609353e-52 | -8.615850e-47 |
| Msa0854860 | Msa1423660 | 0.821740 | 3.437435e-53 | -8.615850e-47 |
| Msa0854860 | Msa1429190 | 0.814241 | 1.703127e-51 | -8.615850e-47 |
| Msa0854860 | Msa1430630 | -0.803898 | 2.797606e-49 | -8.615850e-47 |
| Msa0854860 | Msa1449510 | -0.814105 | 1.825276e-51 | -8.615850e-47 |
| Msa0854860 | Msa1449770 | 0.802770 | 4.791330e-49 | -8.615850e-47 |
| Msa0854860 | Msa1465380 | -0.805770 | 1.136974e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854860 | MtrunA17_Chr5g0432451 | 94.397 | 232 | 7 | 3 | 8 | 238 | 4 | 230 | 2.23e-155 | 430 |
| Msa0854860 | MtrunA17_Chr3g0129071 | 72.903 | 155 | 34 | 4 | 8 | 156 | 4 | 156 | 2.10e-75 | 228 |
| Msa0854860 | MtrunA17_Chr5g0438091 | 56.140 | 228 | 57 | 8 | 12 | 237 | 9 | 195 | 4.80e-71 | 215 |
| Msa0854860 | MtrunA17_Chr4g0043421 | 61.290 | 124 | 46 | 2 | 47 | 168 | 14 | 137 | 1.02e-48 | 158 |
| Msa0854860 | MtrunA17_Chr2g0311601 | 60.504 | 119 | 46 | 1 | 40 | 157 | 5 | 123 | 6.93e-48 | 155 |
| Msa0854860 | MtrunA17_Chr5g0437571 | 66.990 | 103 | 33 | 1 | 47 | 148 | 5 | 107 | 5.00e-46 | 150 |
| Msa0854860 | MtrunA17_Chr3g0114061 | 64.151 | 106 | 37 | 1 | 44 | 148 | 4 | 109 | 5.06e-45 | 148 |
| Msa0854860 | MtrunA17_Chr4g0058651 | 55.474 | 137 | 53 | 3 | 47 | 181 | 10 | 140 | 2.50e-44 | 147 |
| Msa0854860 | MtrunA17_Chr3g0117121 | 61.818 | 110 | 39 | 2 | 47 | 154 | 9 | 117 | 7.51e-44 | 146 |
| Msa0854860 | MtrunA17_Chr3g0106101 | 51.562 | 128 | 59 | 2 | 47 | 173 | 6 | 131 | 9.24e-43 | 143 |
| Msa0854860 | MtrunA17_Chr7g0227511 | 62.857 | 105 | 38 | 1 | 47 | 150 | 10 | 114 | 2.27e-42 | 141 |
| Msa0854860 | MtrunA17_Chr6g0449641 | 54.386 | 114 | 49 | 2 | 47 | 158 | 8 | 120 | 6.82e-41 | 137 |
| Msa0854860 | MtrunA17_Chr4g0030001 | 54.918 | 122 | 52 | 3 | 36 | 154 | 11 | 132 | 1.47e-40 | 137 |
| Msa0854860 | MtrunA17_Chr3g0115431 | 54.098 | 122 | 47 | 2 | 47 | 167 | 8 | 121 | 2.76e-40 | 138 |
| Msa0854860 | MtrunA17_Chr1g0200201 | 50.370 | 135 | 63 | 3 | 49 | 179 | 73 | 207 | 3.68e-39 | 135 |
| Msa0854860 | MtrunA17_Chr6g0449651 | 52.632 | 114 | 51 | 2 | 47 | 158 | 66 | 178 | 5.95e-39 | 134 |
| Msa0854860 | MtrunA17_Chr7g0245871 | 62.745 | 102 | 36 | 2 | 48 | 147 | 27 | 128 | 1.06e-38 | 134 |
| Msa0854860 | MtrunA17_Chr5g0402611 | 59.048 | 105 | 42 | 1 | 47 | 150 | 7 | 111 | 3.02e-38 | 135 |
| Msa0854860 | MtrunA17_Chr3g0113891 | 63.441 | 93 | 33 | 1 | 49 | 140 | 15 | 107 | 1.27e-37 | 130 |
| Msa0854860 | MtrunA17_Chr7g0260971 | 55.357 | 112 | 48 | 2 | 38 | 147 | 4 | 115 | 1.95e-37 | 130 |
| Msa0854860 | MtrunA17_Chr5g0437401 | 57.843 | 102 | 42 | 1 | 49 | 149 | 12 | 113 | 9.11e-37 | 127 |
| Msa0854860 | MtrunA17_Chr8g0353981 | 58.879 | 107 | 41 | 2 | 47 | 151 | 6 | 111 | 1.08e-36 | 129 |
| Msa0854860 | MtrunA17_Chr3g0097221 | 55.660 | 106 | 46 | 1 | 47 | 151 | 6 | 111 | 2.97e-36 | 129 |
| Msa0854860 | MtrunA17_Chr7g0225111 | 50.962 | 104 | 50 | 1 | 49 | 151 | 6 | 109 | 8.55e-34 | 118 |
| Msa0854860 | MtrunA17_Chr1g0184281 | 45.517 | 145 | 74 | 4 | 48 | 189 | 15 | 157 | 1.71e-33 | 120 |
| Msa0854860 | MtrunA17_Chr6g0460951 | 51.852 | 108 | 50 | 2 | 46 | 151 | 38 | 145 | 6.72e-33 | 119 |
| Msa0854860 | MtrunA17_Chr8g0351721 | 53.509 | 114 | 51 | 2 | 36 | 147 | 6 | 119 | 7.63e-33 | 118 |
| Msa0854860 | MtrunA17_Chr8g0351701 | 56.604 | 106 | 44 | 2 | 48 | 151 | 23 | 128 | 1.43e-32 | 118 |
| Msa0854860 | MtrunA17_Chr1g0184271 | 41.011 | 178 | 90 | 6 | 48 | 222 | 12 | 177 | 9.64e-32 | 116 |
| Msa0854860 | MtrunA17_Chr5g0444351 | 39.568 | 139 | 81 | 2 | 49 | 184 | 6 | 144 | 1.02e-30 | 110 |
| Msa0854860 | MtrunA17_Chr7g0261031 | 54.369 | 103 | 43 | 3 | 47 | 146 | 7 | 108 | 3.59e-30 | 112 |
| Msa0854860 | MtrunA17_Chr8g0374601 | 46.087 | 115 | 61 | 1 | 46 | 159 | 24 | 138 | 8.30e-30 | 112 |
| Msa0854860 | MtrunA17_Chr5g0435641 | 53.125 | 96 | 43 | 2 | 47 | 140 | 6 | 101 | 7.95e-29 | 107 |
| Msa0854860 | MtrunA17_Chr8g0374581 | 47.664 | 107 | 54 | 2 | 46 | 150 | 6 | 112 | 8.95e-27 | 103 |
| Msa0854860 | MtrunA17_Chr8g0374591 | 43.925 | 107 | 59 | 1 | 45 | 150 | 5 | 111 | 5.97e-26 | 98.2 |
| Msa0854860 | MtrunA17_Chr4g0059901 | 43.269 | 104 | 58 | 1 | 45 | 147 | 7 | 110 | 5.18e-24 | 96.7 |
| Msa0854860 | MtrunA17_Chr7g0245861 | 53.333 | 90 | 38 | 3 | 48 | 133 | 12 | 101 | 8.05e-24 | 93.2 |
| Msa0854860 | MtrunA17_Chr6g0460941 | 46.067 | 89 | 46 | 2 | 48 | 134 | 7 | 95 | 2.08e-23 | 90.5 |
| Msa0854860 | MtrunA17_Chr6g0452691 | 35.772 | 123 | 77 | 1 | 49 | 169 | 10 | 132 | 9.64e-23 | 91.3 |
| Msa0854860 | MtrunA17_Chr6g0452661 | 37.168 | 113 | 65 | 3 | 43 | 150 | 1 | 112 | 3.10e-21 | 89.0 |
| Msa0854860 | MtrunA17_Chr6g0452671 | 38.235 | 102 | 62 | 1 | 44 | 144 | 7 | 108 | 6.24e-21 | 87.0 |
| Msa0854860 | MtrunA17_Chr4g0040831 | 40.206 | 97 | 57 | 1 | 49 | 144 | 16 | 112 | 1.81e-20 | 85.9 |
| Msa0854860 | MtrunA17_Chr5g0439111 | 36.283 | 113 | 66 | 3 | 43 | 150 | 1 | 112 | 1.78e-19 | 84.0 |
| Msa0854860 | MtrunA17_Chr8g0342351 | 36.697 | 109 | 66 | 3 | 45 | 151 | 9 | 116 | 2.87e-19 | 84.0 |
| Msa0854860 | MtrunA17_Chr2g0330201 | 39.048 | 105 | 61 | 3 | 45 | 147 | 16 | 119 | 3.32e-19 | 84.3 |
| Msa0854860 | MtrunA17_Chr2g0326041 | 48.750 | 80 | 37 | 1 | 20 | 95 | 1 | 80 | 6.86e-19 | 78.6 |
| Msa0854860 | MtrunA17_Chr4g0055441 | 37.500 | 104 | 62 | 2 | 49 | 150 | 3 | 105 | 4.11e-18 | 78.6 |
| Msa0854860 | MtrunA17_Chr2g0326051 | 55.738 | 61 | 27 | 0 | 95 | 155 | 8 | 68 | 2.54e-17 | 75.5 |
| Msa0854860 | MtrunA17_Chr4g0046201 | 34.091 | 88 | 57 | 1 | 47 | 133 | 5 | 92 | 4.73e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854860 | AT2G30340.1 | 69.182 | 159 | 42 | 4 | 10 | 162 | 10 | 167 | 3.42e-71 | 219 |
| Msa0854860 | AT2G30340.2 | 73.793 | 145 | 35 | 3 | 20 | 162 | 25 | 168 | 4.11e-71 | 218 |
| Msa0854860 | AT2G40470.1 | 65.517 | 174 | 52 | 5 | 8 | 175 | 4 | 175 | 4.03e-65 | 202 |
| Msa0854860 | AT2G40470.2 | 71.622 | 148 | 37 | 3 | 31 | 175 | 5 | 150 | 2.57e-62 | 194 |
| Msa0854860 | AT2G30130.1 | 65.049 | 103 | 35 | 1 | 47 | 148 | 7 | 109 | 1.13e-43 | 146 |
| Msa0854860 | AT1G31320.1 | 62.832 | 113 | 41 | 1 | 47 | 158 | 12 | 124 | 2.06e-43 | 144 |
| Msa0854860 | AT5G63090.4 | 52.448 | 143 | 58 | 3 | 47 | 187 | 10 | 144 | 4.26e-42 | 142 |
| Msa0854860 | AT5G63090.3 | 52.448 | 143 | 58 | 3 | 47 | 187 | 10 | 144 | 4.26e-42 | 142 |
| Msa0854860 | AT5G63090.2 | 52.448 | 143 | 58 | 3 | 47 | 187 | 10 | 144 | 4.26e-42 | 142 |
| Msa0854860 | AT5G63090.1 | 52.448 | 143 | 58 | 3 | 47 | 187 | 10 | 144 | 4.26e-42 | 142 |
| Msa0854860 | AT1G07900.1 | 55.357 | 112 | 49 | 1 | 45 | 155 | 30 | 141 | 2.05e-41 | 140 |
| Msa0854860 | AT3G27650.1 | 49.660 | 147 | 67 | 3 | 5 | 150 | 2 | 142 | 2.74e-41 | 139 |
| Msa0854860 | AT2G28500.1 | 59.048 | 105 | 42 | 1 | 45 | 148 | 52 | 156 | 1.18e-40 | 139 |
| Msa0854860 | AT1G16530.1 | 55.963 | 109 | 46 | 2 | 45 | 151 | 11 | 119 | 2.17e-39 | 134 |
| Msa0854860 | AT2G23660.2 | 58.095 | 105 | 43 | 1 | 47 | 150 | 4 | 108 | 1.43e-38 | 136 |
| Msa0854860 | AT2G23660.3 | 58.095 | 105 | 43 | 1 | 47 | 150 | 4 | 108 | 1.43e-38 | 136 |
| Msa0854860 | AT2G23660.1 | 58.095 | 105 | 43 | 1 | 47 | 150 | 4 | 108 | 1.43e-38 | 136 |
| Msa0854860 | AT5G66870.1 | 59.048 | 105 | 42 | 1 | 47 | 150 | 6 | 110 | 3.22e-38 | 135 |
| Msa0854860 | AT1G65620.1 | 62.385 | 109 | 38 | 2 | 45 | 151 | 6 | 113 | 1.03e-37 | 131 |
| Msa0854860 | AT1G65620.4 | 62.385 | 109 | 38 | 2 | 45 | 151 | 6 | 113 | 1.03e-37 | 131 |
| Msa0854860 | AT1G65620.3 | 62.385 | 109 | 38 | 2 | 45 | 151 | 6 | 113 | 1.03e-37 | 131 |
| Msa0854860 | AT1G65620.5 | 62.385 | 109 | 38 | 2 | 45 | 151 | 6 | 113 | 1.03e-37 | 131 |
| Msa0854860 | AT1G65620.2 | 62.385 | 109 | 38 | 2 | 45 | 151 | 6 | 113 | 1.03e-37 | 131 |
| Msa0854860 | AT3G11090.1 | 60.194 | 103 | 40 | 1 | 49 | 150 | 12 | 114 | 3.34e-37 | 128 |
| Msa0854860 | AT4G00210.1 | 55.856 | 111 | 47 | 2 | 39 | 147 | 2 | 112 | 1.26e-35 | 126 |
| Msa0854860 | AT2G42430.1 | 51.304 | 115 | 54 | 2 | 39 | 151 | 6 | 120 | 5.91e-35 | 125 |
| Msa0854860 | AT3G26660.1 | 53.000 | 100 | 46 | 1 | 49 | 147 | 6 | 105 | 2.75e-34 | 119 |
| Msa0854860 | AT3G26620.1 | 53.000 | 100 | 46 | 1 | 49 | 147 | 6 | 105 | 3.10e-34 | 119 |
| Msa0854860 | AT3G03760.1 | 55.140 | 107 | 46 | 2 | 47 | 151 | 50 | 156 | 2.20e-33 | 122 |
| Msa0854860 | AT3G58190.1 | 51.587 | 126 | 48 | 5 | 48 | 170 | 11 | 126 | 1.10e-31 | 116 |
| Msa0854860 | AT5G06080.1 | 51.852 | 108 | 50 | 2 | 47 | 152 | 6 | 113 | 1.56e-31 | 114 |
| Msa0854860 | AT2G31310.1 | 53.922 | 102 | 45 | 2 | 47 | 146 | 6 | 107 | 2.03e-31 | 114 |
| Msa0854860 | AT4G00220.1 | 59.596 | 99 | 38 | 2 | 51 | 147 | 20 | 118 | 1.02e-30 | 114 |
| Msa0854860 | AT2G45420.1 | 54.545 | 99 | 43 | 2 | 51 | 147 | 40 | 138 | 1.88e-29 | 111 |
| Msa0854860 | AT2G45410.1 | 54.545 | 99 | 43 | 2 | 51 | 147 | 19 | 117 | 7.29e-29 | 108 |
| Msa0854860 | AT2G42440.1 | 51.456 | 103 | 46 | 3 | 47 | 146 | 6 | 107 | 1.08e-28 | 108 |
| Msa0854860 | AT3G50510.1 | 46.226 | 106 | 54 | 2 | 47 | 150 | 11 | 115 | 6.02e-26 | 100 |
| Msa0854860 | AT3G50510.2 | 46.226 | 106 | 54 | 2 | 47 | 150 | 11 | 115 | 6.02e-26 | 100 |
| Msa0854860 | AT3G47870.1 | 39.496 | 119 | 64 | 2 | 34 | 151 | 29 | 140 | 2.00e-23 | 96.7 |
| Msa0854860 | AT5G35900.1 | 37.864 | 103 | 61 | 2 | 47 | 147 | 4 | 105 | 1.54e-19 | 84.0 |
| Msa0854860 | AT3G13850.1 | 37.383 | 107 | 64 | 2 | 49 | 153 | 37 | 142 | 5.16e-19 | 84.0 |
| Msa0854860 | AT1G72980.1 | 37.500 | 104 | 64 | 1 | 45 | 147 | 10 | 113 | 6.07e-19 | 82.4 |
| Msa0854860 | AT1G06280.1 | 40.426 | 94 | 55 | 1 | 49 | 141 | 25 | 118 | 4.33e-18 | 80.1 |
| Msa0854860 | AT4G22700.1 | 34.286 | 105 | 64 | 3 | 49 | 150 | 6 | 108 | 2.46e-13 | 67.0 |
| Msa0854860 | AT2G19820.1 | 32.584 | 89 | 58 | 1 | 48 | 134 | 12 | 100 | 3.39e-13 | 64.7 |
| Msa0854860 | AT5G15060.1 | 37.079 | 89 | 51 | 2 | 34 | 118 | 3 | 90 | 2.12e-11 | 60.5 |
Find 34 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACTTATTCACAAATTA+TGG | 0.116130 | 5_4:-47763056 | Msa0854860:CDS |
| ACAAGGGGTTACTGTGTTTA+AGG | 0.163285 | 5_4:+47762997 | None:intergenic |
| AGGTTAAGAGATCCTGTTTA+TGG | 0.207855 | 5_4:-47762512 | Msa0854860:CDS |
| CATCTTTATGGTCCAACTTC+TGG | 0.211009 | 5_4:-47763025 | Msa0854860:CDS |
| TGGTTTATGAAGCTAATTTA+AGG | 0.230042 | 5_4:-47762532 | Msa0854860:CDS |
| GCATCTGCTCTTTGTCCTTC+AGG | 0.259282 | 5_4:+47762566 | None:intergenic |
| AAATAGACCTAAACAAAATA+TGG | 0.270578 | 5_4:+47762149 | None:intergenic |
| ATGGGAAGGAAGCATCTTTA+TGG | 0.293300 | 5_4:-47763037 | Msa0854860:CDS |
| CAATGTCTCTAAATTGCTAT+TGG | 0.302262 | 5_4:-47762861 | Msa0854860:intron |
| AAACAATCAACAAGCATGTT+TGG | 0.327582 | 5_4:-47763331 | None:intergenic |
| CCTTGTGAGTTTGCACTTGT+AGG | 0.338717 | 5_4:+47762356 | None:intergenic |
| ATCTTTATGGTCCAACTTCT+GGG | 0.351664 | 5_4:-47763024 | Msa0854860:CDS |
| GTAGTTCTGCTTGTAAAGAT+TGG | 0.370016 | 5_4:+47762453 | None:intergenic |
| AATTTACCTGTCTCTGTCTC+TGG | 0.401736 | 5_4:+47763304 | None:intergenic |
| GCACCCATGCATCCATAAAC+AGG | 0.433076 | 5_4:+47762500 | None:intergenic |
| GAAACTTATTCACAAATTAT+GGG | 0.443359 | 5_4:-47763055 | Msa0854860:CDS |
| TTTAAGGTTGTCCCAGAAGT+TGG | 0.446561 | 5_4:+47763013 | None:intergenic |
| GGAGGAGGAGCTGGAGACGG+AGG | 0.512178 | 5_4:+47762296 | None:intergenic |
| GGAGCTAAAGTCGTAGGAAG+AGG | 0.531182 | 5_4:+47762317 | None:intergenic |
| GGCGGAGGAGGAGCTGGAGA+CGG | 0.536711 | 5_4:+47762293 | None:intergenic |
| GGATGTCCAGAGACAGAGAC+AGG | 0.560818 | 5_4:-47763310 | Msa0854860:intron |
| AAAGTCGTAGGAAGAGGAAG+AGG | 0.563824 | 5_4:+47762323 | None:intergenic |
| AAGACGAAGACAACGACGAA+AGG | 0.564521 | 5_4:+47762240 | None:intergenic |
| AATAGCTTACATGCAGCACA+AGG | 0.568241 | 5_4:+47762980 | None:intergenic |
| CTTATTCACAAATTATGGGA+AGG | 0.570179 | 5_4:-47763051 | Msa0854860:CDS |
| CCTAAAACAACAATGAGTCA+TGG | 0.572377 | 5_4:-47762194 | Msa0854860:CDS |
| GACGGAGGAGCTAAAGTCGT+AGG | 0.577240 | 5_4:+47762311 | None:intergenic |
| AGATCCTGTTTATGGATGCA+TGG | 0.578296 | 5_4:-47762504 | Msa0854860:CDS |
| AGCAGATGCAGCAAATAGCA+TGG | 0.620064 | 5_4:-47762552 | Msa0854860:CDS |
| CCTACAAGTGCAAACTCACA+AGG | 0.625039 | 5_4:-47762356 | Msa0854860:CDS |
| TAGCTTACATGCAGCACAAG+GGG | 0.625764 | 5_4:+47762982 | None:intergenic |
| GATCCTGTTTATGGATGCAT+GGG | 0.637525 | 5_4:-47762503 | Msa0854860:CDS |
| ATTGAGAAGAAGATGTGCTG+AGG | 0.667195 | 5_4:-47762960 | Msa0854860:CDS |
| ATAGCTTACATGCAGCACAA+GGG | 0.685250 | 5_4:+47762981 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATATATTCTCAACA+AGG | - | chr5_4:47762279-47762298 | Msa0854860:CDS | 15.0% |
| !!! | AATTTGAAATCTATTTTTGT+AGG | - | chr5_4:47762879-47762898 | Msa0854860:CDS | 15.0% |
| !! | AATAATATATATTCTCAACA+AGG | - | chr5_4:47762279-47762298 | Msa0854860:CDS | 15.0% |
| !!! | AATTTGAAATCTATTTTTGT+AGG | - | chr5_4:47762879-47762898 | Msa0854860:CDS | 15.0% |
| !! | TATATCATCTAATCTTTCTT+TGG | + | chr5_4:47762377-47762396 | None:intergenic | 20.0% |
| !! | AGAAACTTATTCACAAATTA+TGG | - | chr5_4:47762417-47762436 | Msa0854860:CDS | 20.0% |
| !! | GAAACTTATTCACAAATTAT+GGG | - | chr5_4:47762418-47762437 | Msa0854860:CDS | 20.0% |
| !! | TATATCATCTAATCTTTCTT+TGG | + | chr5_4:47762377-47762396 | None:intergenic | 20.0% |
| !! | AGAAACTTATTCACAAATTA+TGG | - | chr5_4:47762417-47762436 | Msa0854860:CDS | 20.0% |
| !! | GAAACTTATTCACAAATTAT+GGG | - | chr5_4:47762418-47762437 | Msa0854860:CDS | 20.0% |
| ! | ATATATTCTCAACAAGGTTA+AGG | - | chr5_4:47762285-47762304 | Msa0854860:CDS | 25.0% |
| ! | TTTAACATCCTCTTCAAAAA+AGG | - | chr5_4:47762314-47762333 | Msa0854860:CDS | 25.0% |
| !!! | AATAGTATCCTTTTTTGAAG+AGG | + | chr5_4:47762325-47762344 | None:intergenic | 25.0% |
| ! | TATAGCAAAAATCAACTTAG+AGG | - | chr5_4:47762393-47762412 | Msa0854860:CDS | 25.0% |
| ! | ATAGCAAAAATCAACTTAGA+GGG | - | chr5_4:47762394-47762413 | Msa0854860:CDS | 25.0% |
| ! | ACTGATCTAACGATTATAAT+TGG | - | chr5_4:47762810-47762829 | Msa0854860:intron | 25.0% |
| !!! | TTGAAATCTATTTTTGTAGG+AGG | - | chr5_4:47762882-47762901 | Msa0854860:CDS | 25.0% |
| ! | TGGTTTATGAAGCTAATTTA+AGG | - | chr5_4:47762941-47762960 | Msa0854860:CDS | 25.0% |
| ! | ATATATTCTCAACAAGGTTA+AGG | - | chr5_4:47762285-47762304 | Msa0854860:CDS | 25.0% |
| ! | TTTAACATCCTCTTCAAAAA+AGG | - | chr5_4:47762314-47762333 | Msa0854860:CDS | 25.0% |
| !!! | AATAGTATCCTTTTTTGAAG+AGG | + | chr5_4:47762325-47762344 | None:intergenic | 25.0% |
| ! | TATAGCAAAAATCAACTTAG+AGG | - | chr5_4:47762393-47762412 | Msa0854860:CDS | 25.0% |
| ! | ATAGCAAAAATCAACTTAGA+GGG | - | chr5_4:47762394-47762413 | Msa0854860:CDS | 25.0% |
| ! | ACTGATCTAACGATTATAAT+TGG | - | chr5_4:47762810-47762829 | Msa0854860:intron | 25.0% |
| !!! | TTGAAATCTATTTTTGTAGG+AGG | - | chr5_4:47762882-47762901 | Msa0854860:CDS | 25.0% |
| ! | TGGTTTATGAAGCTAATTTA+AGG | - | chr5_4:47762941-47762960 | Msa0854860:CDS | 25.0% |
| ! | CAAGATTTTCACTATGTTCT+TGG | - | chr5_4:47762227-47762246 | Msa0854860:CDS | 30.0% |
| CTTATTCACAAATTATGGGA+AGG | - | chr5_4:47762422-47762441 | Msa0854860:CDS | 30.0% | |
| GTGAAAAATAAGGAGAGAAA+GGG | + | chr5_4:47762543-47762562 | None:intergenic | 30.0% | |
| CAATGTCTCTAAATTGCTAT+TGG | - | chr5_4:47762612-47762631 | Msa0854860:intron | 30.0% | |
| !!! | CTAATTTTGAGTTATGAGTG+AGG | + | chr5_4:47762644-47762663 | None:intergenic | 30.0% |
| ATAAACCTAACATCGATACA+CGG | - | chr5_4:47762696-47762715 | Msa0854860:intron | 30.0% | |
| AAAAGTTATGACCAAGTCAA+TGG | - | chr5_4:47762782-47762801 | Msa0854860:intron | 30.0% | |
| ! | ATCAGTAAAAACCATTGACT+TGG | + | chr5_4:47762796-47762815 | None:intergenic | 30.0% |
| ! | AACGATTATAATTGGTTCAC+AGG | - | chr5_4:47762818-47762837 | Msa0854860:intron | 30.0% |
| ! | ACGATTATAATTGGTTCACA+GGG | - | chr5_4:47762819-47762838 | Msa0854860:intron | 30.0% |
| ! | CAAGATTTTCACTATGTTCT+TGG | - | chr5_4:47762227-47762246 | Msa0854860:CDS | 30.0% |
| CTTATTCACAAATTATGGGA+AGG | - | chr5_4:47762422-47762441 | Msa0854860:CDS | 30.0% | |
| GTGAAAAATAAGGAGAGAAA+GGG | + | chr5_4:47762543-47762562 | None:intergenic | 30.0% | |
| CAATGTCTCTAAATTGCTAT+TGG | - | chr5_4:47762612-47762631 | Msa0854860:intron | 30.0% | |
| !!! | CTAATTTTGAGTTATGAGTG+AGG | + | chr5_4:47762644-47762663 | None:intergenic | 30.0% |
| ATAAACCTAACATCGATACA+CGG | - | chr5_4:47762696-47762715 | Msa0854860:intron | 30.0% | |
| AAAAGTTATGACCAAGTCAA+TGG | - | chr5_4:47762782-47762801 | Msa0854860:intron | 30.0% | |
| ! | ATCAGTAAAAACCATTGACT+TGG | + | chr5_4:47762796-47762815 | None:intergenic | 30.0% |
| ! | AACGATTATAATTGGTTCAC+AGG | - | chr5_4:47762818-47762837 | Msa0854860:intron | 30.0% |
| ! | ACGATTATAATTGGTTCACA+GGG | - | chr5_4:47762819-47762838 | Msa0854860:intron | 30.0% |
| ATCTTTATGGTCCAACTTCT+GGG | - | chr5_4:47762449-47762468 | Msa0854860:CDS | 35.0% | |
| GGTGAAAAATAAGGAGAGAA+AGG | + | chr5_4:47762544-47762563 | None:intergenic | 35.0% | |
| ! | TGAACAGCTGCAAATTTTTG+AGG | + | chr5_4:47762574-47762593 | None:intergenic | 35.0% |
| ! | GCAGCTGTTCATAAAGTTTT+TGG | - | chr5_4:47762583-47762602 | Msa0854860:intron | 35.0% |
| TGTAAAGTCAGACATATGAC+TGG | + | chr5_4:47762762-47762781 | None:intergenic | 35.0% | |
| AGGTTAAGAGATCCTGTTTA+TGG | - | chr5_4:47762961-47762980 | Msa0854860:CDS | 35.0% | |
| ! | GTAGTTCTGCTTGTAAAGAT+TGG | + | chr5_4:47763023-47763042 | None:intergenic | 35.0% |
| !! | TGAGAAGCCAATACTTTTTG+TGG | + | chr5_4:47763204-47763223 | None:intergenic | 35.0% |
| !!! | TGACTCATTGTTGTTTTAGG+TGG | + | chr5_4:47763279-47763298 | None:intergenic | 35.0% |
| !!! | CCATGACTCATTGTTGTTTT+AGG | + | chr5_4:47763282-47763301 | None:intergenic | 35.0% |
| CCTAAAACAACAATGAGTCA+TGG | - | chr5_4:47763279-47763298 | Msa0854860:intron | 35.0% | |
| ATCTTTATGGTCCAACTTCT+GGG | - | chr5_4:47762449-47762468 | Msa0854860:CDS | 35.0% | |
| GGTGAAAAATAAGGAGAGAA+AGG | + | chr5_4:47762544-47762563 | None:intergenic | 35.0% | |
| ! | TGAACAGCTGCAAATTTTTG+AGG | + | chr5_4:47762574-47762593 | None:intergenic | 35.0% |
| ! | GCAGCTGTTCATAAAGTTTT+TGG | - | chr5_4:47762583-47762602 | Msa0854860:intron | 35.0% |
| TGTAAAGTCAGACATATGAC+TGG | + | chr5_4:47762762-47762781 | None:intergenic | 35.0% | |
| AGGTTAAGAGATCCTGTTTA+TGG | - | chr5_4:47762961-47762980 | Msa0854860:CDS | 35.0% | |
| ! | GTAGTTCTGCTTGTAAAGAT+TGG | + | chr5_4:47763023-47763042 | None:intergenic | 35.0% |
| !! | TGAGAAGCCAATACTTTTTG+TGG | + | chr5_4:47763204-47763223 | None:intergenic | 35.0% |
| !!! | TGACTCATTGTTGTTTTAGG+TGG | + | chr5_4:47763279-47763298 | None:intergenic | 35.0% |
| !!! | CCATGACTCATTGTTGTTTT+AGG | + | chr5_4:47763282-47763301 | None:intergenic | 35.0% |
| CCTAAAACAACAATGAGTCA+TGG | - | chr5_4:47763279-47763298 | Msa0854860:intron | 35.0% | |
| AATTTACCTGTCTCTGTCTC+TGG | + | chr5_4:47762172-47762191 | None:intergenic | 40.0% | |
| !! | ATGGGAAGGAAGCATCTTTA+TGG | - | chr5_4:47762436-47762455 | Msa0854860:CDS | 40.0% |
| CATCTTTATGGTCCAACTTC+TGG | - | chr5_4:47762448-47762467 | Msa0854860:CDS | 40.0% | |
| ! | TTTAAGGTTGTCCCAGAAGT+TGG | + | chr5_4:47762463-47762482 | None:intergenic | 40.0% |
| ACAAGGGGTTACTGTGTTTA+AGG | + | chr5_4:47762479-47762498 | None:intergenic | 40.0% | |
| ATAGCTTACATGCAGCACAA+GGG | + | chr5_4:47762495-47762514 | None:intergenic | 40.0% | |
| AATAGCTTACATGCAGCACA+AGG | + | chr5_4:47762496-47762515 | None:intergenic | 40.0% | |
| ATTGAGAAGAAGATGTGCTG+AGG | - | chr5_4:47762513-47762532 | Msa0854860:CDS | 40.0% | |
| GGCTCATGTGGTGAAAAATA+AGG | + | chr5_4:47762553-47762572 | None:intergenic | 40.0% | |
| !!! | GCAAATTTTTGAGGCTCATG+TGG | + | chr5_4:47762565-47762584 | None:intergenic | 40.0% |
| ! | ACTAACCGTGTATCGATGTT+AGG | + | chr5_4:47762704-47762723 | None:intergenic | 40.0% |
| ! | ACATCGATACACGGTTAGTT+AGG | - | chr5_4:47762705-47762724 | Msa0854860:intron | 40.0% |
| !!! | TTTTTGTAGGAGGTACCTGA+AGG | - | chr5_4:47762892-47762911 | Msa0854860:CDS | 40.0% |
| AGATCCTGTTTATGGATGCA+TGG | - | chr5_4:47762969-47762988 | Msa0854860:CDS | 40.0% | |
| GATCCTGTTTATGGATGCAT+GGG | - | chr5_4:47762970-47762989 | Msa0854860:CDS | 40.0% | |
| !! | GAAGCCAATACTTTTTGTGG+CGG | + | chr5_4:47763201-47763220 | None:intergenic | 40.0% |
| AATTTACCTGTCTCTGTCTC+TGG | + | chr5_4:47762172-47762191 | None:intergenic | 40.0% | |
| !! | ATGGGAAGGAAGCATCTTTA+TGG | - | chr5_4:47762436-47762455 | Msa0854860:CDS | 40.0% |
| CATCTTTATGGTCCAACTTC+TGG | - | chr5_4:47762448-47762467 | Msa0854860:CDS | 40.0% | |
| ! | TTTAAGGTTGTCCCAGAAGT+TGG | + | chr5_4:47762463-47762482 | None:intergenic | 40.0% |
| ACAAGGGGTTACTGTGTTTA+AGG | + | chr5_4:47762479-47762498 | None:intergenic | 40.0% | |
| ATAGCTTACATGCAGCACAA+GGG | + | chr5_4:47762495-47762514 | None:intergenic | 40.0% | |
| AATAGCTTACATGCAGCACA+AGG | + | chr5_4:47762496-47762515 | None:intergenic | 40.0% | |
| ATTGAGAAGAAGATGTGCTG+AGG | - | chr5_4:47762513-47762532 | Msa0854860:CDS | 40.0% | |
| GGCTCATGTGGTGAAAAATA+AGG | + | chr5_4:47762553-47762572 | None:intergenic | 40.0% | |
| !!! | GCAAATTTTTGAGGCTCATG+TGG | + | chr5_4:47762565-47762584 | None:intergenic | 40.0% |
| ! | ACTAACCGTGTATCGATGTT+AGG | + | chr5_4:47762704-47762723 | None:intergenic | 40.0% |
| ! | ACATCGATACACGGTTAGTT+AGG | - | chr5_4:47762705-47762724 | Msa0854860:intron | 40.0% |
| !!! | TTTTTGTAGGAGGTACCTGA+AGG | - | chr5_4:47762892-47762911 | Msa0854860:CDS | 40.0% |
| AGATCCTGTTTATGGATGCA+TGG | - | chr5_4:47762969-47762988 | Msa0854860:CDS | 40.0% | |
| GATCCTGTTTATGGATGCAT+GGG | - | chr5_4:47762970-47762989 | Msa0854860:CDS | 40.0% | |
| !! | GAAGCCAATACTTTTTGTGG+CGG | + | chr5_4:47763201-47763220 | None:intergenic | 40.0% |
| TAGCTTACATGCAGCACAAG+GGG | + | chr5_4:47762494-47762513 | None:intergenic | 45.0% | |
| AGCAGATGCAGCAAATAGCA+TGG | - | chr5_4:47762921-47762940 | Msa0854860:CDS | 45.0% | |
| CCTTGTGAGTTTGCACTTGT+AGG | + | chr5_4:47763120-47763139 | None:intergenic | 45.0% | |
| CCTACAAGTGCAAACTCACA+AGG | - | chr5_4:47763117-47763136 | Msa0854860:intron | 45.0% | |
| AAAGTCGTAGGAAGAGGAAG+AGG | + | chr5_4:47763153-47763172 | None:intergenic | 45.0% | |
| !! | AATACTTTTTGTGGCGGAGG+AGG | + | chr5_4:47763195-47763214 | None:intergenic | 45.0% |
| ! | TCCTCCGCCACAAAAAGTAT+TGG | - | chr5_4:47763194-47763213 | Msa0854860:intron | 45.0% |
| AAGACGAAGACAACGACGAA+AGG | + | chr5_4:47763236-47763255 | None:intergenic | 45.0% | |
| TAGCTTACATGCAGCACAAG+GGG | + | chr5_4:47762494-47762513 | None:intergenic | 45.0% | |
| AGCAGATGCAGCAAATAGCA+TGG | - | chr5_4:47762921-47762940 | Msa0854860:CDS | 45.0% | |
| CCTTGTGAGTTTGCACTTGT+AGG | + | chr5_4:47763120-47763139 | None:intergenic | 45.0% | |
| CCTACAAGTGCAAACTCACA+AGG | - | chr5_4:47763117-47763136 | Msa0854860:intron | 45.0% | |
| AAAGTCGTAGGAAGAGGAAG+AGG | + | chr5_4:47763153-47763172 | None:intergenic | 45.0% | |
| !! | AATACTTTTTGTGGCGGAGG+AGG | + | chr5_4:47763195-47763214 | None:intergenic | 45.0% |
| ! | TCCTCCGCCACAAAAAGTAT+TGG | - | chr5_4:47763194-47763213 | Msa0854860:intron | 45.0% |
| AAGACGAAGACAACGACGAA+AGG | + | chr5_4:47763236-47763255 | None:intergenic | 45.0% | |
| GCATCTGCTCTTTGTCCTTC+AGG | + | chr5_4:47762910-47762929 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+AGG | + | chr5_4:47762976-47762995 | None:intergenic | 50.0% | |
| GGAGCTAAAGTCGTAGGAAG+AGG | + | chr5_4:47763159-47763178 | None:intergenic | 50.0% | |
| !! | GCCAATACTTTTTGTGGCGG+AGG | + | chr5_4:47763198-47763217 | None:intergenic | 50.0% |
| GCATCTGCTCTTTGTCCTTC+AGG | + | chr5_4:47762910-47762929 | None:intergenic | 50.0% | |
| GCACCCATGCATCCATAAAC+AGG | + | chr5_4:47762976-47762995 | None:intergenic | 50.0% | |
| GGAGCTAAAGTCGTAGGAAG+AGG | + | chr5_4:47763159-47763178 | None:intergenic | 50.0% | |
| !! | GCCAATACTTTTTGTGGCGG+AGG | + | chr5_4:47763198-47763217 | None:intergenic | 50.0% |
| GGATGTCCAGAGACAGAGAC+AGG | - | chr5_4:47762163-47762182 | Msa0854860:CDS | 55.0% | |
| GACGGAGGAGCTAAAGTCGT+AGG | + | chr5_4:47763165-47763184 | None:intergenic | 55.0% | |
| GGATGTCCAGAGACAGAGAC+AGG | - | chr5_4:47762163-47762182 | Msa0854860:CDS | 55.0% | |
| GACGGAGGAGCTAAAGTCGT+AGG | + | chr5_4:47763165-47763184 | None:intergenic | 55.0% | |
| !! | TTTTGTGGCGGAGGAGGAGC+TGG | + | chr5_4:47763189-47763208 | None:intergenic | 60.0% |
| !! | TTTTGTGGCGGAGGAGGAGC+TGG | + | chr5_4:47763189-47763208 | None:intergenic | 60.0% |
| GGAGGAGGAGCTGGAGACGG+AGG | + | chr5_4:47763180-47763199 | None:intergenic | 70.0% | |
| GGCGGAGGAGGAGCTGGAGA+CGG | + | chr5_4:47763183-47763202 | None:intergenic | 70.0% | |
| GGAGGAGGAGCTGGAGACGG+AGG | + | chr5_4:47763180-47763199 | None:intergenic | 70.0% | |
| GGCGGAGGAGGAGCTGGAGA+CGG | + | chr5_4:47763183-47763202 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 47762157 | 47763338 | 47762157 | ID=Msa0854860;Name=Msa0854860 |
| chr5_4 | mRNA | 47762157 | 47763338 | 47762157 | ID=Msa0854860-mRNA-1;Parent=Msa0854860;Name=Msa0854860-mRNA-1;_AED=0.03;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|238 |
| chr5_4 | exon | 47763311 | 47763338 | 47763311 | ID=Msa0854860-mRNA-1:exon:15056;Parent=Msa0854860-mRNA-1 |
| chr5_4 | exon | 47762862 | 47763115 | 47762862 | ID=Msa0854860-mRNA-1:exon:15055;Parent=Msa0854860-mRNA-1 |
| chr5_4 | exon | 47762157 | 47762591 | 47762157 | ID=Msa0854860-mRNA-1:exon:15054;Parent=Msa0854860-mRNA-1 |
| chr5_4 | CDS | 47763311 | 47763338 | 47763311 | ID=Msa0854860-mRNA-1:cds;Parent=Msa0854860-mRNA-1 |
| chr5_4 | CDS | 47762862 | 47763115 | 47762862 | ID=Msa0854860-mRNA-1:cds;Parent=Msa0854860-mRNA-1 |
| chr5_4 | CDS | 47762157 | 47762591 | 47762157 | ID=Msa0854860-mRNA-1:cds;Parent=Msa0854860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
