AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0896990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896990 MtrunA17_Chr6g0482041 95.238 210 10 0 260 469 4 213 2.58e-148 421
Msa0896990 MtrunA17_Chr6g0482041 44.444 153 47 5 140 259 2 149 4.52e-25 102
Msa0896990 MtrunA17_Chr6g0482041 39.548 177 65 6 1 139 1 173 6.42e-24 99.4
Msa0896990 MtrunA17_Chr6g0481951 58.291 199 81 2 271 468 16 213 4.75e-72 227
Msa0896990 MtrunA17_Chr6g0481951 51.079 139 32 4 153 259 16 150 9.28e-31 118
Msa0896990 MtrunA17_Chr6g0481951 40.909 176 65 4 1 139 1 174 7.64e-25 102
Msa0896990 MtrunA17_Chr6g0481961 58.794 199 80 2 271 468 16 213 8.39e-72 226
Msa0896990 MtrunA17_Chr6g0481961 51.079 139 32 4 153 259 16 150 8.05e-31 118
Msa0896990 MtrunA17_Chr6g0481961 40.909 176 65 4 1 139 1 174 7.80e-25 102
Msa0896990 MtrunA17_Chr6g0482031 78.767 146 3 1 142 259 4 149 1.48e-61 199
Msa0896990 MtrunA17_Chr6g0482031 53.266 199 83 6 273 466 17 210 3.91e-60 196
Msa0896990 MtrunA17_Chr6g0482031 50.943 159 41 5 18 140 17 174 4.03e-39 140
Msa0896990 MtrunA17_Chr6g0482021 69.753 162 26 2 1 140 1 161 3.30e-61 198
Msa0896990 MtrunA17_Chr6g0482021 42.424 198 96 5 271 466 16 197 8.32e-45 155
Msa0896990 MtrunA17_Chr6g0482021 53.968 126 34 4 153 259 16 136 6.49e-31 118
Msa0896990 MtrunA17_Chr6g0482011 48.731 197 89 5 271 465 15 201 1.10e-55 184
Msa0896990 MtrunA17_Chr6g0482011 41.667 156 54 7 16 139 15 165 8.43e-24 99.0
Msa0896990 MtrunA17_Chr6g0482011 42.857 133 44 4 153 259 15 141 4.30e-22 94.0
Msa0896990 MtrunA17_Chr7g0228581 46.907 194 90 4 278 469 21 203 5.62e-52 174
Msa0896990 MtrunA17_Chr7g0228581 35.252 139 60 6 29 139 27 163 1.75e-16 78.2
Msa0896990 MtrunA17_Chr7g0228581 37.288 118 49 5 164 259 25 139 1.63e-11 63.5
Msa0896990 MtrunA17_Chr6g0481941 44.762 210 95 9 266 466 6 203 1.33e-43 152
Msa0896990 MtrunA17_Chr6g0481911 42.995 207 101 8 266 466 6 201 1.34e-42 149
Msa0896990 MtrunA17_Chr3g0137421 32.877 219 112 10 260 469 6 198 2.87e-20 89.0
Msa0896990 MtrunA17_Chr3g0082651 33.178 214 111 9 262 466 11 201 1.06e-19 87.4
Msa0896990 MtrunA17_Chr3g0082681 35.263 190 99 8 286 466 27 201 1.19e-19 87.0
Msa0896990 MtrunA17_Chr3g0082641 34.737 190 100 8 286 466 27 201 2.59e-19 86.3
Msa0896990 MtrunA17_Chr3g0082671 35.417 192 96 9 286 466 27 201 2.77e-19 85.9
Msa0896990 MtrunA17_Chr3g0082661 34.737 190 100 8 286 466 27 201 3.33e-19 85.9
Msa0896990 MtrunA17_Chr2g0314441 34.426 183 94 8 279 456 25 186 3.95e-19 85.5
Msa0896990 MtrunA17_Chr1g0173431 33.333 207 116 8 267 466 8 199 6.92e-19 84.7
Msa0896990 MtrunA17_Chr3g0137411 33.488 215 108 9 262 466 8 197 1.16e-18 84.3
Msa0896990 MtrunA17_Chr4g0022751 31.884 207 120 8 267 466 8 200 3.49e-18 82.8
Msa0896990 MtrunA17_Chr3g0137441 28.767 219 123 8 260 469 6 200 3.58e-18 83.2
Msa0896990 MtrunA17_Chr4g0022761 32.212 208 114 9 267 466 8 196 5.46e-18 82.0
Msa0896990 MtrunA17_Chr8g0359161 34.574 188 102 9 286 466 29 202 4.83e-17 79.7
Msa0896990 MtrunA17_Chr8g0359111 30.435 207 123 7 267 466 8 200 7.29e-17 79.0
Msa0896990 MtrunA17_Chr7g0269461 33.708 178 95 10 286 456 27 188 5.95e-14 70.5
Msa0896990 MtrunA17_Chr6g0476921 30.808 198 111 8 281 469 23 203 3.91e-13 68.6
Msa0896990 MtrunA17_Chr2g0314431 31.868 182 104 7 279 458 25 188 5.68e-11 62.0
Msa0896990 MtrunA17_Chr6g0452521 26.667 240 155 7 232 465 8 232 7.40e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896990 AT1G17860.1 45.933 209 91 7 260 466 5 193 1.78e-47 162
Msa0896990 AT1G17860.1 28.916 166 78 5 4 139 2 157 2.53e-12 66.2
Msa0896990 AT1G73260.1 33.953 215 120 8 258 468 9 205 1.28e-22 96.3
Msa0896990 AT1G73325.1 32.558 215 119 11 261 468 8 203 2.12e-16 78.6

Find 134 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTAATAACACCTTTCTT+AGG 0.178129 6_1:+88188126 None:intergenic
GCAGGAATGTTGGGGTCTTT+AGG 0.226794 6_1:-88187873 Msa0896990:CDS
GACACGAATATCACCTTTAA+TGG 0.240870 6_1:+88195145 None:intergenic
ACTCTTCACATGCTGTATTA+AGG 0.241608 6_1:+88188076 None:intergenic
CAGGAATGTTGGGGTCTTTA+GGG 0.264531 6_1:-88187872 Msa0896990:CDS
ACCCTAAGAAAGGTGTTATT+AGG 0.266748 6_1:-88188128 Msa0896990:CDS
CTAAGGTTTGCACCCATTAA+AGG 0.268093 6_1:-88195158 Msa0896990:intron
GTGACCACTAATGGTATATT+AGG 0.274148 6_1:-88195020 Msa0896990:CDS
ACAAAGCCACATATTGTAAA+TGG 0.283069 6_1:+88191870 None:intergenic
AATGTTTCTTCTTTAGAAAA+AGG 0.285974 6_1:+88191627 None:intergenic
ACACCTTTCTTAGGGTTAAC+AGG 0.290681 6_1:+88188135 None:intergenic
GAAGATTGATCCTTCTTCTA+AGG 0.319535 6_1:-88195054 Msa0896990:CDS
CCCTAAGAAAGGTGTTATTA+GGG 0.319854 6_1:-88188127 Msa0896990:CDS
CACACTACTGAATAGTTATA+AGG 0.321277 6_1:+88195077 None:intergenic
GTCACTACCGGTGGGGTTCT+TGG 0.322883 6_1:-88188003 Msa0896990:CDS
AGCCGGAATGATGTAGTAAT+TGG 0.358723 6_1:+88191896 None:intergenic
AGTCAAGTCTTTGACATAAC+CGG 0.369764 6_1:-88195317 Msa0896990:CDS
ATTGTCAACGGTGTCCTTGC+CGG 0.371760 6_1:+88187975 None:intergenic
CTCAATGTTGTAGTGGTTGA+GGG 0.376701 6_1:-88188186 Msa0896990:CDS
GACCGTCACATGGGGTTGTC+GGG 0.380454 6_1:+88188274 None:intergenic
CTGATGTGCCATACAAAGTT+AGG 0.386416 6_1:-88187819 Msa0896990:CDS
AACGCCTTTCTTGTTGTTAA+CGG 0.386453 6_1:+88191740 None:intergenic
AGCTTCTCCGAGCAAGGGTT+GGG 0.386871 6_1:+88188374 None:intergenic
ATCAGTTCGAAGCTTCTTCC+CGG 0.395949 6_1:+88195298 None:intergenic
CTCTTCACATGCTGTATTAA+GGG 0.397035 6_1:+88188077 None:intergenic
GCAACATTTGTGACCACTAA+TGG 0.399420 6_1:-88195029 Msa0896990:CDS
GTGACTACTAATGGTGTATT+GGG 0.404413 6_1:-88191603 Msa0896990:CDS
ACGCCTTTCTTGTTGTTAAC+GGG 0.404872 6_1:+88191741 None:intergenic
GGTTGACACAGAAGGCAAAA+AGG 0.410166 6_1:-88188331 Msa0896990:CDS
AGGTCATGTGCAGGAATGTT+GGG 0.410673 6_1:-88187882 Msa0896990:CDS
CCCTAATAACACCTTTCTTA+GGG 0.414565 6_1:+88188127 None:intergenic
GAAACATTTGTGACTACTAA+TGG 0.419288 6_1:-88191612 Msa0896990:CDS
ACTCAATGTTGTAGTGGTTG+AGG 0.421669 6_1:-88188187 Msa0896990:CDS
GCTAAGCCATTTACAATATG+TGG 0.430563 6_1:-88191876 Msa0896990:CDS
CGCCGGGATGATGTAGTAAT+CGG 0.437166 6_1:+88195274 None:intergenic
GCAAGGACACCGTTGACAAT+TGG 0.438091 6_1:-88187972 Msa0896990:CDS
TTGTCAACGGTGTCCTTGCC+GGG 0.438512 6_1:+88187976 None:intergenic
TGTGACTACTAATGGTGTAT+TGG 0.442930 6_1:-88191604 Msa0896990:CDS
TTGTCTTCGCAACCACTACT+TGG 0.447050 6_1:-88191981 Msa0896990:CDS
GGGTCTTTAGGGATAGTAAT+GGG 0.453756 6_1:-88187861 Msa0896990:CDS
GGTTGGAACCTAACTTTGTA+TGG 0.454358 6_1:+88187811 None:intergenic
CAGCTTCTCCGAGCAAGGGT+TGG 0.454758 6_1:+88188373 None:intergenic
TACCAATTACTACATCATTC+CGG 0.457107 6_1:-88191898 Msa0896990:CDS
GTTCGAATTCAATTCATAGT+TGG 0.461077 6_1:-88194989 Msa0896990:CDS
TCACATGGGGTTGTCGGGAC+TGG 0.470206 6_1:+88188279 None:intergenic
ACAACCCCATGTGACGGTCG+TGG 0.470483 6_1:-88188270 Msa0896990:CDS
GGGCCTTGTGTTGTCGGTAG+TGG 0.472611 6_1:-88188249 Msa0896990:CDS
GGTCGTGGGCCTTGTGTTGT+CGG 0.474565 6_1:-88188255 Msa0896990:CDS
CGACCGTCACATGGGGTTGT+CGG 0.478237 6_1:+88188273 None:intergenic
ACACGAATATCACCTTTAAT+GGG 0.478775 6_1:+88195146 None:intergenic
CATATTGTAAATGGCTTAGC+CGG 0.479615 6_1:+88191879 None:intergenic
ACCCCTGTTAACCCTAAGAA+AGG 0.480020 6_1:-88188138 Msa0896990:CDS
CACCTTTCTTAGGGTTAACA+GGG 0.482056 6_1:+88188136 None:intergenic
TCTGTGTCAACCACTTGCTC+AGG 0.489109 6_1:+88188342 None:intergenic
TTGTCCACCCAACCCTTGCT+CGG 0.489235 6_1:-88188381 Msa0896990:CDS
CGATGTGTCAATGACTTGAT+CGG 0.502159 6_1:+88191941 None:intergenic
AAATATCTCCACCATTCGCC+GGG 0.505714 6_1:+88195258 None:intergenic
GAACTTTATGTTGAGATCAG+TGG 0.505826 6_1:+88191707 None:intergenic
CTATGAATTGAATTCGAACC+CGG 0.505952 6_1:+88194993 None:intergenic
TACTACATCATCCCGGCGAA+TGG 0.506747 6_1:-88195269 Msa0896990:intron
TTGAGTGGACATGTCTCGTT+TGG 0.518641 6_1:+88188204 None:intergenic
CATGTGAAGAGTCCACGATA+TGG 0.519311 6_1:-88188065 Msa0896990:CDS
GTGACCTAATATACCATTAG+TGG 0.521680 6_1:+88195016 None:intergenic
AAATACTTCAAGCAGATGGT+TGG 0.522101 6_1:+88187794 None:intergenic
GAAATATCTCCACCATTCGC+CGG 0.523535 6_1:+88195257 None:intergenic
AGCGTCAGCTTCTCCGAGCA+AGG 0.525965 6_1:+88188368 None:intergenic
ATGGGGTTGTCGGGACTGGT+CGG 0.526887 6_1:+88188283 None:intergenic
ATTTCCCTTGAAAGTTCTAT+CGG 0.528904 6_1:-88195239 Msa0896990:intron
TTGAAAATACTTCAAGCAGA+TGG 0.530226 6_1:+88187790 None:intergenic
CAAGGCCCACGACCGTCACA+TGG 0.530644 6_1:+88188264 None:intergenic
AGGATCAATCTTCCACACTA+AGG 0.534325 6_1:+88191647 None:intergenic
GTATGATGATGCTTATAAGT+TGG 0.537055 6_1:-88194952 Msa0896990:CDS
ACTGATCTCAATATTATGCT+AGG 0.539300 6_1:-88195119 Msa0896990:CDS
AATGTTGCTACCTTAGAAGA+AGG 0.539472 6_1:+88195044 None:intergenic
ATAATCAAGGTTTACCGTTG+AGG 0.542322 6_1:-88191770 Msa0896990:intron
TTCCACACTAAGGAATGGTT+AGG 0.542536 6_1:+88191657 None:intergenic
GAGCAAGGGTTGGGTGGACA+AGG 0.544353 6_1:+88188383 None:intergenic
AAGGTCATGTGCAGGAATGT+TGG 0.544552 6_1:-88187883 Msa0896990:CDS
GATGTGTCAATGACTTGATC+GGG 0.551157 6_1:+88191942 None:intergenic
TAATGGTGTATTGGGAAACC+CGG 0.551726 6_1:-88191595 Msa0896990:CDS
GGTGGGGTTCTTGGAAATCC+CGG 0.552765 6_1:-88187994 Msa0896990:CDS
TTGATTCCTCATCTGGACAA+TGG 0.554639 6_1:-88188029 Msa0896990:CDS
ATCATCAAGCGTCCATATCG+TGG 0.559535 6_1:+88188053 None:intergenic
CAATGGTTTGTCACTACCGG+TGG 0.561342 6_1:-88188012 Msa0896990:CDS
CAACCCCATGTGACGGTCGT+GGG 0.563780 6_1:-88188269 Msa0896990:CDS
AATGGTTTGTCACTACCGGT+GGG 0.564160 6_1:-88188011 Msa0896990:CDS
GGACAATGGTTTGTCACTAC+CGG 0.566652 6_1:-88188015 Msa0896990:CDS
AAGGCCCACGACCGTCACAT+GGG 0.567219 6_1:+88188265 None:intergenic
GTCCTAACCATTCCTTAGTG+TGG 0.567409 6_1:-88191659 Msa0896990:CDS
TAATGGTATATTAGGTCACC+CGG 0.568418 6_1:-88195012 Msa0896990:CDS
CTTATAACTATTCAGTAGTG+TGG 0.568951 6_1:-88195076 Msa0896990:CDS
GCTTTAGATAATACAAGTAG+TGG 0.569760 6_1:+88195347 None:intergenic
TGTCTTGATGTTAAGATCAG+TGG 0.570079 6_1:+88188101 None:intergenic
AAACCACTACCGACAACACA+AGG 0.571628 6_1:+88188246 None:intergenic
TGCTAGGTAATGCTGATGAT+AGG 0.573028 6_1:-88195103 Msa0896990:CDS
TGACGCTTCACCTGAGCAAG+TGG 0.575987 6_1:-88188352 Msa0896990:CDS
ACACCCGTTAACAACAAGAA+AGG 0.576147 6_1:-88191744 Msa0896990:CDS
TTCACAACTACTACATGAAG+AGG 0.579250 6_1:+88195206 None:intergenic
AATCTTGAACCAATTGTCAA+CGG 0.580218 6_1:+88187963 None:intergenic
TAGCATAATATTGAGATCAG+TGG 0.581881 6_1:+88195121 None:intergenic
GTCAAGTCTTTGACATAACC+GGG 0.583783 6_1:-88195316 Msa0896990:CDS
GATCAAGTCATTGACACATC+GGG 0.588958 6_1:-88191939 Msa0896990:CDS
GGGGTCTTTAGGGATAGTAA+TGG 0.589720 6_1:-88187862 Msa0896990:CDS
CAATCTTCCACACTAAGGAA+TGG 0.596624 6_1:+88191652 None:intergenic
TTCTCCGAGCAAGGGTTGGG+TGG 0.598373 6_1:+88188377 None:intergenic
GTGAGGACAATGCAAGGAGA+AGG 0.606680 6_1:+88195372 None:intergenic
GACAAACCATTGTCCAGATG+AGG 0.609229 6_1:+88188023 None:intergenic
GTCCCGACAACCCCATGTGA+CGG 0.611299 6_1:-88188276 Msa0896990:CDS
TGCAGAAATCACATACCGTA+GGG 0.614159 6_1:+88187905 None:intergenic
GCTTCAGTTGATCCAAGTAG+TGG 0.616203 6_1:+88191969 None:intergenic
CGATCAAGTCATTGACACAT+CGG 0.616565 6_1:-88191940 Msa0896990:CDS
GCGTCAGCTTCTCCGAGCAA+GGG 0.616662 6_1:+88188369 None:intergenic
TCAACCACTACAACATTGAG+TGG 0.618412 6_1:+88188189 None:intergenic
GGTCATGTGCAGGAATGTTG+GGG 0.620344 6_1:-88187881 Msa0896990:CDS
TTAACGGGTGTGAACCTCAA+CGG 0.621698 6_1:+88191756 None:intergenic
GAGCAAGTGGTTGACACAGA+AGG 0.621958 6_1:-88188339 Msa0896990:CDS
ATTTCTGCAAGGTCATGTGC+AGG 0.628252 6_1:-88187891 Msa0896990:CDS
TTGCAGAAATCACATACCGT+AGG 0.628538 6_1:+88187904 None:intergenic
TAATACAAGTAGTGGTTGTG+AGG 0.628930 6_1:+88195355 None:intergenic
TACGGTATGTGATTTCTGCA+AGG 0.630885 6_1:-88187902 Msa0896990:CDS
GGGATTTCCAAGAACCCCAC+CGG 0.635438 6_1:+88187996 None:intergenic
TTCCGATTACTACATCATCC+CGG 0.664164 6_1:-88195276 Msa0896990:CDS
TCACAACTACTACATGAAGA+GGG 0.665709 6_1:+88195207 None:intergenic
AATGGTGTATTGGGAAACCC+GGG 0.666072 6_1:-88191594 Msa0896990:intron
ATGTCCACTCAATGTTGTAG+TGG 0.670052 6_1:-88188193 Msa0896990:CDS
GTGGTTGTGAGGACAATGCA+AGG 0.673338 6_1:+88195366 None:intergenic
TAGTAATGGGAACCAGCGTG+TGG 0.674297 6_1:-88187848 Msa0896990:CDS
ATGGTTTGTCACTACCGGTG+GGG 0.675340 6_1:-88188010 Msa0896990:CDS
ACCTTTCTTAGGGTTAACAG+GGG 0.679673 6_1:+88188137 None:intergenic
CATCAGTGAGAGCCACACGC+TGG 0.681901 6_1:+88187836 None:intergenic
GGTTCTTGGAAATCCCGGCA+AGG 0.687124 6_1:-88187989 Msa0896990:CDS
TCGGATGTAGTAGTCTACTC+CGG 0.689014 6_1:+88188302 None:intergenic
AATGGTATATTAGGTCACCC+GGG 0.693227 6_1:-88195011 Msa0896990:CDS
TATGAATTGAATTCGAACCC+GGG 0.700679 6_1:+88194994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAATTATAATTATTT+TGG - chr6_1:88189560-88189579 Msa0896990:intron 0.0%
!!! TAAAAAATTATAATTATTTT+GGG - chr6_1:88189561-88189580 Msa0896990:intron 0.0%
!! AAAATCATTAAAAAATATGA+AGG + chr6_1:88189409-88189428 None:intergenic 10.0%
!!! TTAATGATTTTTTTTAGAAA+TGG - chr6_1:88189418-88189437 Msa0896990:intron 10.0%
!!! TAATGATTTTTTTTAGAAAT+GGG - chr6_1:88189419-88189438 Msa0896990:intron 10.0%
!! AATTTCAATAAAAAATATGA+AGG - chr6_1:88189619-88189638 Msa0896990:intron 10.0%
!! GATTCAAAATAAAATAATTA+AGG + chr6_1:88189788-88189807 None:intergenic 10.0%
!!! TAATTTATTATTTTAACACT+CGG + chr6_1:88190655-88190674 None:intergenic 10.0%
!!! ATATATTTTTATTCTTTACA+AGG + chr6_1:88191892-88191911 None:intergenic 10.0%
!!! TAAGTAAAATTAGTTTTTTT+TGG + chr6_1:88192144-88192163 None:intergenic 10.0%
!!! TGTTTATCTTTTTTTTTTTT+TGG + chr6_1:88192526-88192545 None:intergenic 10.0%
!! GATTTATAAGTATAAGAATA+GGG - chr6_1:88188325-88188344 Msa0896990:CDS 15.0%
!!! ACAAATGTTATAATTTTATG+AGG - chr6_1:88188429-88188448 Msa0896990:intron 15.0%
!!! TAGAGTAATTTCATTTTAAT+TGG + chr6_1:88188687-88188706 None:intergenic 15.0%
!! ATTCATTTATTATGTATGAA+AGG - chr6_1:88189174-88189193 Msa0896990:intron 15.0%
!! ATTAATTATTGGGTTAAATA+AGG - chr6_1:88189258-88189277 Msa0896990:intron 15.0%
!!! ATTTGATGTATGAAATTTTT+TGG + chr6_1:88189354-88189373 None:intergenic 15.0%
!!! AACAATTCTAATTCTTTTTT+CGG + chr6_1:88189467-88189486 None:intergenic 15.0%
!!! AATATGACTTTTTATGTTTT+TGG + chr6_1:88189525-88189544 None:intergenic 15.0%
!! TAAAAAAAAACACTAAATCA+TGG - chr6_1:88190529-88190548 Msa0896990:intron 15.0%
!!! GTTGTATACATTTTTTTTTA+AGG + chr6_1:88190592-88190611 None:intergenic 15.0%
!!! AATTTATTATTTTAACACTC+GGG + chr6_1:88190654-88190673 None:intergenic 15.0%
!! CAACAATTAATAATAAATGT+TGG - chr6_1:88190989-88191008 Msa0896990:intron 15.0%
!!! TTATTTTTGTTCTAAAGTAT+TGG - chr6_1:88191969-88191988 Msa0896990:CDS 15.0%
!! AACAAATACTAATTATTTGA+AGG - chr6_1:88192061-88192080 Msa0896990:intron 15.0%
!! ACATGAATGATTATAAATAT+AGG + chr6_1:88192204-88192223 None:intergenic 15.0%
!!! TCTTTTTCTTATAAAGTAAA+GGG + chr6_1:88192702-88192721 None:intergenic 15.0%
!! AATCTCAATATAATGAATTA+GGG - chr6_1:88192998-88193017 Msa0896990:intron 15.0%
!!! GTATATATGTATTTTACTTT+GGG + chr6_1:88193510-88193529 None:intergenic 15.0%
!!! AAACAAATAATTTTTTGTGT+TGG + chr6_1:88194341-88194360 None:intergenic 15.0%
!! GGATTTATAAGTATAAGAAT+AGG - chr6_1:88188324-88188343 Msa0896990:CDS 20.0%
!!! ATATATTTTTATTCTCCACA+AGG + chr6_1:88188473-88188492 None:intergenic 20.0%
!!! GATTTTAAAAAAACTAGCAA+AGG + chr6_1:88189035-88189054 None:intergenic 20.0%
!!! ATACCTCTAAAATATTTCTT+AGG - chr6_1:88189316-88189335 Msa0896990:intron 20.0%
!!! TATTGAAATTTTTCAGACAT+GGG + chr6_1:88189609-88189628 None:intergenic 20.0%
!!! TTATTGAAATTTTTCAGACA+TGG + chr6_1:88189610-88189629 None:intergenic 20.0%
!! TTAAAATCAAATGGTTAAGA+TGG - chr6_1:88189671-88189690 Msa0896990:intron 20.0%
!!! TAAAACATTCTTTAGGTTTT+TGG + chr6_1:88189711-88189730 None:intergenic 20.0%
!!! AAAAACCTAAAGAATGTTTT+AGG - chr6_1:88189710-88189729 Msa0896990:intron 20.0%
!!! AAAACCTAAAGAATGTTTTA+GGG - chr6_1:88189711-88189730 Msa0896990:intron 20.0%
!! AATCAAATGTTGGTATATTT+AGG - chr6_1:88189741-88189760 Msa0896990:intron 20.0%
!! TAAGAATTTAAATGAGTTGT+GGG + chr6_1:88190135-88190154 None:intergenic 20.0%
!! TTAAACTAAGAAAGCAAAAA+GGG + chr6_1:88190258-88190277 None:intergenic 20.0%
!! ATTAAACTAAGAAAGCAAAA+AGG + chr6_1:88190259-88190278 None:intergenic 20.0%
!!! TCTTTTTACTACTATAGAAA+GGG + chr6_1:88190285-88190304 None:intergenic 20.0%
!!! ATCTTTTTACTACTATAGAA+AGG + chr6_1:88190286-88190305 None:intergenic 20.0%
!! GAAACTAAAATTAAGAAAGA+AGG + chr6_1:88190316-88190335 None:intergenic 20.0%
!!! TATTTTATCAAATAGTCTTG+TGG + chr6_1:88190506-88190525 None:intergenic 20.0%
!!! ATTTTAGTTTGCTCTAAATA+TGG + chr6_1:88190750-88190769 None:intergenic 20.0%
!! ATAAAAATGTTACTAGTACT+TGG + chr6_1:88190889-88190908 None:intergenic 20.0%
!!! AATGTTTCTTCTTTAGAAAA+AGG + chr6_1:88191578-88191597 None:intergenic 20.0%
!!! TTCTGAAACTTAACTTTAAA+GGG + chr6_1:88191794-88191813 None:intergenic 20.0%
!! GTGCATATATTCAAAAAATA+TGG + chr6_1:88192091-88192110 None:intergenic 20.0%
!! TATATATTGTTTGCATTTGA+AGG - chr6_1:88192438-88192457 Msa0896990:intron 20.0%
!!! GGAGTAATAAATTTAACTTT+AGG + chr6_1:88192586-88192605 None:intergenic 20.0%
!!! GTCTTTTTCTTATAAAGTAA+AGG + chr6_1:88192703-88192722 None:intergenic 20.0%
!! CAATCTCAATATAATGAATT+AGG - chr6_1:88192997-88193016 Msa0896990:intron 20.0%
!! ATCTCAATATAATGAATTAG+GGG - chr6_1:88192999-88193018 Msa0896990:intron 20.0%
!! GTGTACATCATAAAATTAAA+GGG + chr6_1:88193165-88193184 None:intergenic 20.0%
!! TGTGTACATCATAAAATTAA+AGG + chr6_1:88193166-88193185 None:intergenic 20.0%
!! CAAAACACATTAAAACATTT+CGG - chr6_1:88193378-88193397 Msa0896990:intron 20.0%
!!! GGTATATATGTATTTTACTT+TGG + chr6_1:88193511-88193530 None:intergenic 20.0%
!! CTGAAATGAAATAATCAAAT+TGG + chr6_1:88194483-88194502 None:intergenic 20.0%
!! ATTGATTGTATTGGAAATTA+TGG + chr6_1:88194527-88194546 None:intergenic 20.0%
!!! CTTTGTAAATTTGTATTGAT+GGG + chr6_1:88194732-88194751 None:intergenic 20.0%
!! TCTTTGTAAATTTGTATTGA+TGG + chr6_1:88194733-88194752 None:intergenic 20.0%
!!! TAATATGTATACTGATTTCA+TGG + chr6_1:88194783-88194802 None:intergenic 20.0%
! TGGAAATTAAGCTTTACTAA+TGG - chr6_1:88188404-88188423 Msa0896990:CDS 25.0%
! GTGATCTAATATAACTTCAA+GGG + chr6_1:88188590-88188609 None:intergenic 25.0%
! TGTGATCTAATATAACTTCA+AGG + chr6_1:88188591-88188610 None:intergenic 25.0%
!! ATGTATCAAAAAAGGTATGT+TGG + chr6_1:88189005-88189024 None:intergenic 25.0%
! GACTTCTAATGTATCAAAAA+AGG + chr6_1:88189013-88189032 None:intergenic 25.0%
! TGCTAAAACTATAGGATATT+TGG + chr6_1:88189109-88189128 None:intergenic 25.0%
! AACTACAATGCTAAAACTAT+AGG + chr6_1:88189117-88189136 None:intergenic 25.0%
! TATTGGGTTAAATAAGGAAA+TGG - chr6_1:88189264-88189283 Msa0896990:intron 25.0%
!! GAGGTATTAAAATCAAATGT+TGG + chr6_1:88189303-88189322 None:intergenic 25.0%
!!! ATGCCTAAGAAATATTTTAG+AGG + chr6_1:88189322-88189341 None:intergenic 25.0%
! TAAAATATTTCTTAGGCATG+TGG - chr6_1:88189323-88189342 Msa0896990:intron 25.0%
! AAAATATTTCTTAGGCATGT+GGG - chr6_1:88189324-88189343 Msa0896990:intron 25.0%
!!! GATGTATGAAATTTTTTGGA+GGG + chr6_1:88189350-88189369 None:intergenic 25.0%
!!! TGATGTATGAAATTTTTTGG+AGG + chr6_1:88189351-88189370 None:intergenic 25.0%
!!! ACATGAGTTGATTAAAAAGT+AGG - chr6_1:88189646-88189665 Msa0896990:intron 25.0%
!!! CATGAGTTGATTAAAAAGTA+GGG - chr6_1:88189647-88189666 Msa0896990:intron 25.0%
! AAGTAGGGATTAAAATCAAA+TGG - chr6_1:88189662-88189681 Msa0896990:intron 25.0%
!! GTTAAGATGGAAAATTTTAG+AGG - chr6_1:88189684-88189703 Msa0896990:intron 25.0%
!!! AAACCTAAAGAATGTTTTAG+GGG - chr6_1:88189712-88189731 Msa0896990:intron 25.0%
! AAGTTAAAAGACTAAGTTGT+TGG - chr6_1:88189815-88189834 Msa0896990:intron 25.0%
! AAGAATTTAAATGAGTTGTG+GGG + chr6_1:88190134-88190153 None:intergenic 25.0%
! CTAAGAATTTAAATGAGTTG+TGG + chr6_1:88190136-88190155 None:intergenic 25.0%
! TGTTTATTCTTAACCATTGT+AGG - chr6_1:88190221-88190240 Msa0896990:intron 25.0%
! GTTTATTCTTAACCATTGTA+GGG - chr6_1:88190222-88190241 Msa0896990:intron 25.0%
! TAAACTAAGAAAGCAAAAAG+GGG + chr6_1:88190257-88190276 None:intergenic 25.0%
!! CTTTTTACTACTATAGAAAG+GGG + chr6_1:88190284-88190303 None:intergenic 25.0%
! AAAAAATTATGTTGTCCTCA+TGG - chr6_1:88190400-88190419 Msa0896990:intron 25.0%
!! TCTTTTAGTGTGAATAAGTA+AGG + chr6_1:88190473-88190492 None:intergenic 25.0%
! ACATCTTAGTATAAGACTTT+GGG - chr6_1:88190856-88190875 Msa0896990:intron 25.0%
! GGTAATGAATGAATATATGA+TGG + chr6_1:88191119-88191138 None:intergenic 25.0%
!!! TGTTGATTTTGTGTTTGTTT+TGG + chr6_1:88191140-88191159 None:intergenic 25.0%
!! TTTGTTAGTTGTTTCAATAG+TGG - chr6_1:88191350-88191369 Msa0896990:intron 25.0%
! AATTTACGTGTATAAGACTA+GGG - chr6_1:88191742-88191761 Msa0896990:CDS 25.0%
!!! CTTCTGAAACTTAACTTTAA+AGG + chr6_1:88191795-88191814 None:intergenic 25.0%
!!! CTTTAAAGTTAAGTTTCAGA+AGG - chr6_1:88191793-88191812 Msa0896990:intron 25.0%
! ACTTAGAATTTCTTTATCAC+TGG + chr6_1:88191839-88191858 None:intergenic 25.0%
! AAATTCTAAGTGTGCTTATA+AGG - chr6_1:88191848-88191867 Msa0896990:intron 25.0%
!!! ATTAGTTTTTTTTGGCTAGT+TGG + chr6_1:88192136-88192155 None:intergenic 25.0%
!!! ATAAACACACTTCTCTTTTT+TGG - chr6_1:88192481-88192500 Msa0896990:intron 25.0%
!!! TAAACACACTTCTCTTTTTT+GGG - chr6_1:88192482-88192501 Msa0896990:intron 25.0%
!!! TTTTTTTTTGGTACAAGAGA+GGG + chr6_1:88192514-88192533 None:intergenic 25.0%
!!! TTTTTTTTTTGGTACAAGAG+AGG + chr6_1:88192515-88192534 None:intergenic 25.0%
!! ATAAATTTAACTTTAGGTGC+TGG + chr6_1:88192580-88192599 None:intergenic 25.0%
! TAATATATACTACGTTTAGC+AGG - chr6_1:88192882-88192901 Msa0896990:intron 25.0%
! GAAAGAAAAAAAAAAGAGTC+AGG + chr6_1:88193056-88193075 None:intergenic 25.0%
!!! AGAGATTTTGTTTTTAAGTC+AGG + chr6_1:88193094-88193113 None:intergenic 25.0%
!! ACATTGAGCAAGTTTAATTT+GGG - chr6_1:88193183-88193202 Msa0896990:intron 25.0%
! AAAAAATTGTGAACAGTTGA+AGG + chr6_1:88193264-88193283 None:intergenic 25.0%
!!! AATGTTTTAATGTGTTTTGG+AGG + chr6_1:88193377-88193396 None:intergenic 25.0%
!!! CGAAATGTTTTAATGTGTTT+TGG + chr6_1:88193380-88193399 None:intergenic 25.0%
! TGGAAATGAGTAATACAATT+TGG - chr6_1:88194043-88194062 Msa0896990:intron 25.0%
! GGAAATGAGTAATACAATTT+GGG - chr6_1:88194044-88194063 Msa0896990:intron 25.0%
!! TTTCATGTGGATATTTTGTT+TGG + chr6_1:88194102-88194121 None:intergenic 25.0%
!!! TTTTTAAGAGAGATTTTGGT+GGG + chr6_1:88194167-88194186 None:intergenic 25.0%
! ATCATAGATTCATAGGTATA+TGG + chr6_1:88194210-88194229 None:intergenic 25.0%
!!! CAAATAATTTTTTGTGTTGG+TGG + chr6_1:88194338-88194357 None:intergenic 25.0%
! AGAAAAAAAGTCATACATGT+TGG - chr6_1:88194374-88194393 Msa0896990:intron 25.0%
! TTGTATTGGAAATTATGGTT+TGG + chr6_1:88194522-88194541 None:intergenic 25.0%
! TCAGCATTAATTGATTGTAT+TGG + chr6_1:88194536-88194555 None:intergenic 25.0%
! AACAAAGAAACTTTATGAGT+TGG - chr6_1:88194597-88194616 Msa0896990:intron 25.0%
!! AATGATGTGATCTAAAACTA+TGG + chr6_1:88194675-88194694 None:intergenic 25.0%
! GCTTTAGATAATACAAGTAG+TGG + chr6_1:88187858-88187877 None:intergenic 30.0%
ATTTCCCTTGAAAGTTCTAT+CGG - chr6_1:88187963-88187982 Msa0896990:CDS 30.0%
ACACGAATATCACCTTTAAT+GGG + chr6_1:88188059-88188078 None:intergenic 30.0%
TAGCATAATATTGAGATCAG+TGG + chr6_1:88188084-88188103 None:intergenic 30.0%
ACTGATCTCAATATTATGCT+AGG - chr6_1:88188083-88188102 Msa0896990:CDS 30.0%
CACACTACTGAATAGTTATA+AGG + chr6_1:88188128-88188147 None:intergenic 30.0%
CTTATAACTATTCAGTAGTG+TGG - chr6_1:88188126-88188145 Msa0896990:CDS 30.0%
GTTCGAATTCAATTCATAGT+TGG - chr6_1:88188213-88188232 Msa0896990:CDS 30.0%
! GTATGATGATGCTTATAAGT+TGG - chr6_1:88188250-88188269 Msa0896990:CDS 30.0%
TAAGAATAGGGAAATACGTT+TGG - chr6_1:88188337-88188356 Msa0896990:CDS 30.0%
!! ATTGAGTTTGATTTTCCTTG+TGG - chr6_1:88188455-88188474 Msa0896990:intron 30.0%
! TAATTAGTCTCCACAATTAC+TGG + chr6_1:88188565-88188584 None:intergenic 30.0%
GAAATTACTCTAGTCATTGT+TGG - chr6_1:88188695-88188714 Msa0896990:intron 30.0%
! AGAGAGGATGATTTTTAACA+TGG - chr6_1:88188784-88188803 Msa0896990:intron 30.0%
AGTACACATAGTGATATGAT+TGG + chr6_1:88188831-88188850 None:intergenic 30.0%
! GAAGATGTTGTTAAGTTGTT+TGG + chr6_1:88188906-88188925 None:intergenic 30.0%
GGAATACTTTGATACATTAG+AGG + chr6_1:88188958-88188977 None:intergenic 30.0%
GATATTCAAGAGATTTGAGA+TGG + chr6_1:88188979-88188998 None:intergenic 30.0%
CAATGTCTAAACATAAGTGT+TGG - chr6_1:88189214-88189233 Msa0896990:intron 30.0%
TCAAATGTTGGTGTATTTAG+AGG + chr6_1:88189291-88189310 None:intergenic 30.0%
!! AACCTAAAGAATGTTTTAGG+GGG - chr6_1:88189713-88189732 Msa0896990:intron 30.0%
CAAATGTTGGTATATTTAGG+AGG - chr6_1:88189744-88189763 Msa0896990:intron 30.0%
! TTGATTTTGTGAGGTTGTAT+TGG + chr6_1:88189949-88189968 None:intergenic 30.0%
!! TTCACAAAGTTGATTTTGTG+AGG + chr6_1:88189958-88189977 None:intergenic 30.0%
AAACTAAGAAAGCAAAAAGG+GGG + chr6_1:88190256-88190275 None:intergenic 30.0%
TATATGACCAAGTCAGTTTA+TGG - chr6_1:88190687-88190706 Msa0896990:intron 30.0%
CACATCTTAGTATAAGACTT+TGG - chr6_1:88190855-88190874 Msa0896990:intron 30.0%
! ATAGCAACCATAGATTTTGA+AGG - chr6_1:88190937-88190956 Msa0896990:intron 30.0%
TACCAATTACTACATCATTC+CGG - chr6_1:88191304-88191323 Msa0896990:intron 30.0%
ACAAAGCCACATATTGTAAA+TGG + chr6_1:88191335-88191354 None:intergenic 30.0%
GTAGTTGTGAAACATAATCA+AGG - chr6_1:88191419-88191438 Msa0896990:intron 30.0%
GAAACATTTGTGACTACTAA+TGG - chr6_1:88191590-88191609 Msa0896990:intron 30.0%
GTTCAAATACAATCCACAAT+TGG - chr6_1:88191630-88191649 Msa0896990:CDS 30.0%
CATCTTCATACTTCTCAATT+TGG + chr6_1:88191658-88191677 None:intergenic 30.0%
GTATGAAGATGCTTATAAGT+TGG - chr6_1:88191667-88191686 Msa0896990:CDS 30.0%
AACCATGTATGCAAAGATAT+TGG - chr6_1:88191719-88191738 Msa0896990:CDS 30.0%
TTCCAATATCTTTGCATACA+TGG + chr6_1:88191724-88191743 None:intergenic 30.0%
GAATTTACGTGTATAAGACT+AGG - chr6_1:88191741-88191760 Msa0896990:CDS 30.0%
! AGTATTGGAATATCTCCTAA+CGG - chr6_1:88191984-88192003 Msa0896990:CDS 30.0%
!! CGGTTTTTAAGCATGATATT+GGG + chr6_1:88192333-88192352 None:intergenic 30.0%
! TGAAATTAGTCTCCCAAATT+AGG + chr6_1:88192356-88192375 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr6_1:88192833-88192852 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr6_1:88192612-88192631 Msa0896990:intron 30.0%
ATATTGTGTGAGAGAAAAGT+TGG - chr6_1:88192742-88192761 Msa0896990:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr6_1:88192833-88192852 Msa0896990:intron 30.0%
CACATTGAGCAAGTTTAATT+TGG - chr6_1:88193182-88193201 Msa0896990:intron 30.0%
GCAACATATACATATAAGCT+TGG - chr6_1:88193205-88193224 Msa0896990:intron 30.0%
TACATATAAGCTTGGTTGAT+TGG - chr6_1:88193213-88193232 Msa0896990:intron 30.0%
TTCAGATTATAGAATCCGAA+CGG - chr6_1:88193332-88193351 Msa0896990:intron 30.0%
CAGAATTCATGGGAATAAAT+TGG + chr6_1:88193460-88193479 None:intergenic 30.0%
! GGCATAATTGTCATTTACTT+TGG - chr6_1:88194023-88194042 Msa0896990:intron 30.0%
!! TTTTGTTTGGTAGAAGGAAT+GGG + chr6_1:88194089-88194108 None:intergenic 30.0%
!! ATTTTGTTTGGTAGAAGGAA+TGG + chr6_1:88194090-88194109 None:intergenic 30.0%
!! TGGATATTTTGTTTGGTAGA+AGG + chr6_1:88194095-88194114 None:intergenic 30.0%
!! TTTTAAGAGAGATTTTGGTG+GGG + chr6_1:88194166-88194185 None:intergenic 30.0%
!! GTTTTTAAGAGAGATTTTGG+TGG + chr6_1:88194168-88194187 None:intergenic 30.0%
!! GTGGTTTTTAAGAGAGATTT+TGG + chr6_1:88194171-88194190 None:intergenic 30.0%
GATTGAGATCATAGATTCAT+AGG + chr6_1:88194217-88194236 None:intergenic 30.0%
!! TCAAATTGGTTTGCAATTCA+GGG + chr6_1:88194469-88194488 None:intergenic 30.0%
!! ATCAAATTGGTTTGCAATTC+AGG + chr6_1:88194470-88194489 None:intergenic 30.0%
AATCTTGAACCAATTGTCAA+CGG + chr6_1:88195242-88195261 None:intergenic 30.0%
TAATACAAGTAGTGGTTGTG+AGG + chr6_1:88187850-88187869 None:intergenic 35.0%
AGTCAAGTCTTTGACATAAC+CGG - chr6_1:88187885-88187904 Msa0896990:CDS 35.0%
TTCACCGATAGAACTTTCAA+GGG + chr6_1:88187970-88187989 None:intergenic 35.0%
ATTCACCGATAGAACTTTCA+AGG + chr6_1:88187971-88187990 None:intergenic 35.0%
TCACAACTACTACATGAAGA+GGG + chr6_1:88187998-88188017 None:intergenic 35.0%
TTCACAACTACTACATGAAG+AGG + chr6_1:88187999-88188018 None:intergenic 35.0%
GTAGTTGTGAAACATAGACA+AGG - chr6_1:88188008-88188027 Msa0896990:CDS 35.0%
GACACGAATATCACCTTTAA+TGG + chr6_1:88188060-88188079 None:intergenic 35.0%
GAAGATTGATCCTTCTTCTA+AGG - chr6_1:88188148-88188167 Msa0896990:CDS 35.0%
AATGTTGCTACCTTAGAAGA+AGG + chr6_1:88188161-88188180 None:intergenic 35.0%
GTGACCACTAATGGTATATT+AGG - chr6_1:88188182-88188201 Msa0896990:CDS 35.0%
GTGACCTAATATACCATTAG+TGG + chr6_1:88188189-88188208 None:intergenic 35.0%
TAATGGTATATTAGGTCACC+CGG - chr6_1:88188190-88188209 Msa0896990:CDS 35.0%
TATGAATTGAATTCGAACCC+GGG + chr6_1:88188211-88188230 None:intergenic 35.0%
CTATGAATTGAATTCGAACC+CGG + chr6_1:88188212-88188231 None:intergenic 35.0%
AACCATGTATGCAAAGATGT+TGG - chr6_1:88188302-88188321 Msa0896990:CDS 35.0%
ACCATGTATGCAAAGATGTT+GGG - chr6_1:88188303-88188322 Msa0896990:CDS 35.0%
! TGCTGAAACTTGATTTTGAG+GGG + chr6_1:88188377-88188396 None:intergenic 35.0%
! CTGCTGAAACTTGATTTTGA+GGG + chr6_1:88188378-88188397 None:intergenic 35.0%
! ACTGCTGAAACTTGATTTTG+AGG + chr6_1:88188379-88188398 None:intergenic 35.0%
! TTGATACATTAGAGGCACAA+TGG + chr6_1:88188950-88188969 None:intergenic 35.0%
TAATTGTGTGTGTATGTGTG+AGG + chr6_1:88189064-88189083 None:intergenic 35.0%
GATGAGATGATTGTTGAGAT+TGG + chr6_1:88189087-88189106 None:intergenic 35.0%
TGCGGTTAATATTCAAGTCA+TGG + chr6_1:88190107-88190126 None:intergenic 35.0%
AATAAGTTGTTACGAGTCGT+GGG + chr6_1:88190182-88190201 None:intergenic 35.0%
TAATAAGTTGTTACGAGTCG+TGG + chr6_1:88190183-88190202 None:intergenic 35.0%
TATTCTTAACCATTGTAGGG+TGG - chr6_1:88190225-88190244 Msa0896990:intron 35.0%
! ATGGACATAGATTAGTTGGT+TGG - chr6_1:88190419-88190438 Msa0896990:intron 35.0%
AAGATCTCCATAAACTGACT+TGG + chr6_1:88190697-88190716 None:intergenic 35.0%
TATACTAAGATGTGTCGTGT+AGG + chr6_1:88190849-88190868 None:intergenic 35.0%
AGAACTGCCTTCAAAATCTA+TGG + chr6_1:88190947-88190966 None:intergenic 35.0%
!! TTTTGAAGGCAGTTCTTGAA+TGG - chr6_1:88190951-88190970 Msa0896990:intron 35.0%
AGTGATTTGAACAATACAGC+TGG + chr6_1:88191015-88191034 None:intergenic 35.0%
GCTGCTACAATTCATATCTA+TGG + chr6_1:88191070-88191089 None:intergenic 35.0%
CATATTGTAAATGGCTTAGC+CGG + chr6_1:88191326-88191345 None:intergenic 35.0%
GCTAAGCCATTTACAATATG+TGG - chr6_1:88191326-88191345 Msa0896990:intron 35.0%
! GTTAGTTGTTTCAATAGTGG+AGG - chr6_1:88191353-88191372 Msa0896990:intron 35.0%
TCACAACTACTACATCAAGA+GGG + chr6_1:88191409-88191428 None:intergenic 35.0%
TTCACAACTACTACATCAAG+AGG + chr6_1:88191410-88191429 None:intergenic 35.0%
ATAATCAAGGTTTACCGTTG+AGG - chr6_1:88191432-88191451 Msa0896990:intron 35.0%
!! AACGCCTTTCTTGTTGTTAA+CGG + chr6_1:88191465-88191484 None:intergenic 35.0%
GAACTTTATGTTGAGATCAG+TGG + chr6_1:88191498-88191517 None:intergenic 35.0%
TGTGACTACTAATGGTGTAT+TGG - chr6_1:88191598-88191617 Msa0896990:CDS 35.0%
GTGACTACTAATGGTGTATT+GGG - chr6_1:88191599-88191618 Msa0896990:CDS 35.0%
! TTGTGGATTGTATTTGAACC+CGG + chr6_1:88191629-88191648 None:intergenic 35.0%
! TCTCAATTTGGAACCAATTG+TGG + chr6_1:88191646-88191665 None:intergenic 35.0%
ACTCCAAAGCAAATTCATTC+AGG - chr6_1:88192028-88192047 Msa0896990:intron 35.0%
! TTGTTTGTTAGAACCTCGAT+CGG - chr6_1:88192266-88192285 Msa0896990:intron 35.0%
TTATAATATGTAGCCGATCG+AGG + chr6_1:88192282-88192301 None:intergenic 35.0%
!! GCGGTTTTTAAGCATGATAT+TGG + chr6_1:88192334-88192353 None:intergenic 35.0%
TGCTTAAAAACCGCCTAATT+TGG - chr6_1:88192340-88192359 Msa0896990:intron 35.0%
GCTTAAAAACCGCCTAATTT+GGG - chr6_1:88192341-88192360 Msa0896990:intron 35.0%
! AATTAGTCTCCCAAATTAGG+CGG + chr6_1:88192353-88192372 None:intergenic 35.0%
CTAATTTCACCAACTACTAG+TGG - chr6_1:88192367-88192386 Msa0896990:intron 35.0%
! AGCCAGAGTACAATTTTGTA+CGG - chr6_1:88192403-88192422 Msa0896990:intron 35.0%
!!! ATGAGTGTCGTTTTAGGTAT+TGG - chr6_1:88192618-88192637 Msa0896990:intron 35.0%
TTGGCACACAGATTAAGAAA+TGG - chr6_1:88192637-88192656 Msa0896990:intron 35.0%
AGACAAACATAAAGTTGCGT+TGG - chr6_1:88192719-88192738 Msa0896990:intron 35.0%
! ACGAACGTGAAGTATTACAA+TGG + chr6_1:88192916-88192935 None:intergenic 35.0%
AAGATATGCATGGTTGTGAT+AGG + chr6_1:88192962-88192981 None:intergenic 35.0%
AATTGAGTGTTTATGCCGTT+CGG + chr6_1:88193350-88193369 None:intergenic 35.0%
ATGTTACGTACAGTTTGTAC+TGG + chr6_1:88193554-88193573 None:intergenic 35.0%
! CTTGGAGAAATTTTCGTGTT+TGG - chr6_1:88193868-88193887 Msa0896990:intron 35.0%
GTGTTTGGAGAAGTTGAAAA+TGG - chr6_1:88193883-88193902 Msa0896990:intron 35.0%
TTTGGAGAAGTTGAAAATGG+AGG - chr6_1:88193886-88193905 Msa0896990:intron 35.0%
TTGTACTTAGAACAAGCTCA+AGG - chr6_1:88194283-88194302 Msa0896990:intron 35.0%
TGACATATCTAACTAGACGT+GGG - chr6_1:88194553-88194572 Msa0896990:intron 35.0%
! TTGTATTGATGGGAGTTTGT+AGG + chr6_1:88194722-88194741 None:intergenic 35.0%
!! ACCCTAAGAAAGGTGTTATT+AGG - chr6_1:88195074-88195093 Msa0896990:CDS 35.0%
CCCTAATAACACCTTTCTTA+GGG + chr6_1:88195078-88195097 None:intergenic 35.0%
!! CCCTAAGAAAGGTGTTATTA+GGG - chr6_1:88195075-88195094 Msa0896990:CDS 35.0%
ACCCTAATAACACCTTTCTT+AGG + chr6_1:88195079-88195098 None:intergenic 35.0%
TGTCTTGATGTTAAGATCAG+TGG + chr6_1:88195104-88195123 None:intergenic 35.0%
CTCTTCACATGCTGTATTAA+GGG + chr6_1:88195128-88195147 None:intergenic 35.0%
ACTCTTCACATGCTGTATTA+AGG + chr6_1:88195129-88195148 None:intergenic 35.0%
!!! GATGATTTTGATTCCTCATC+TGG - chr6_1:88195166-88195185 Msa0896990:intron 35.0%
GTCAAGTCTTTGACATAACC+GGG - chr6_1:88187886-88187905 Msa0896990:CDS 40.0%
TTCCGATTACTACATCATCC+CGG - chr6_1:88187926-88187945 Msa0896990:CDS 40.0%
CAAACCTTAGTGGAAAACCA+AGG + chr6_1:88188034-88188053 None:intergenic 40.0%
! TTAATGGGTGCAAACCTTAG+TGG + chr6_1:88188044-88188063 None:intergenic 40.0%
CTAAGGTTTGCACCCATTAA+AGG - chr6_1:88188044-88188063 Msa0896990:CDS 40.0%
TGCTAGGTAATGCTGATGAT+AGG - chr6_1:88188099-88188118 Msa0896990:CDS 40.0%
GCAACATTTGTGACCACTAA+TGG - chr6_1:88188173-88188192 Msa0896990:CDS 40.0%
AATGGTATATTAGGTCACCC+GGG - chr6_1:88188191-88188210 Msa0896990:CDS 40.0%
TTGCATACATGGTTGCAAGA+AGG + chr6_1:88188296-88188315 None:intergenic 40.0%
TCCCAACATCTTTGCATACA+TGG + chr6_1:88188307-88188326 None:intergenic 40.0%
TCAAGTTTCAGCAGTCTTGA+TGG - chr6_1:88188384-88188403 Msa0896990:CDS 40.0%
ATATCGCGTACCAGTAATTG+TGG - chr6_1:88188552-88188571 Msa0896990:intron 40.0%
!!! AGAGAAAGTGCTTTTGAGAG+AGG - chr6_1:88188768-88188787 Msa0896990:intron 40.0%
GTCCCCCTAAAACATTCTTT+AGG + chr6_1:88189718-88189737 None:intergenic 40.0%
GGGGGACTAAAATCAAATGT+TGG - chr6_1:88189731-88189750 Msa0896990:intron 40.0%
!! AAGTTGTTGGTAGCAACCTT+TGG - chr6_1:88189828-88189847 Msa0896990:intron 40.0%
CTCCTATCAGATTTCGCTAT+CGG + chr6_1:88189870-88189889 None:intergenic 40.0%
CCAACTAATCTATGTCCATG+AGG + chr6_1:88190418-88190437 None:intergenic 40.0%
CCTCATGGACATAGATTAGT+TGG - chr6_1:88190415-88190434 Msa0896990:intron 40.0%
! ACATAGATTAGTTGGTTGGC+AGG - chr6_1:88190423-88190442 Msa0896990:intron 40.0%
! CATAGATTAGTTGGTTGGCA+GGG - chr6_1:88190424-88190443 Msa0896990:intron 40.0%
! ATAGATTAGTTGGTTGGCAG+GGG - chr6_1:88190425-88190444 Msa0896990:intron 40.0%
GATGTGTCAATGACTTGATC+GGG + chr6_1:88191263-88191282 None:intergenic 40.0%
CGATGTGTCAATGACTTGAT+CGG + chr6_1:88191264-88191283 None:intergenic 40.0%
CGATCAAGTCATTGACACAT+CGG - chr6_1:88191262-88191281 Msa0896990:intron 40.0%
GATCAAGTCATTGACACATC+GGG - chr6_1:88191263-88191282 Msa0896990:intron 40.0%
AGCCGGAATGATGTAGTAAT+TGG + chr6_1:88191309-88191328 None:intergenic 40.0%
ACACCCGTTAACAACAAGAA+AGG - chr6_1:88191458-88191477 Msa0896990:intron 40.0%
!! ACGCCTTTCTTGTTGTTAAC+GGG + chr6_1:88191464-88191483 None:intergenic 40.0%
TTCCACACTAAGGAATGGTT+AGG + chr6_1:88191548-88191567 None:intergenic 40.0%
CAATCTTCCACACTAAGGAA+TGG + chr6_1:88191553-88191572 None:intergenic 40.0%
AGGATCAATCTTCCACACTA+AGG + chr6_1:88188141-88188160 None:intergenic 40.0%
TAATGGTGTATTGGGAAACC+CGG - chr6_1:88191607-88191626 Msa0896990:CDS 40.0%
! TGTGGATTGTATTTGAACCC+GGG + chr6_1:88191628-88191647 None:intergenic 40.0%
TGCATACATGGTTGCAAGTA+GGG + chr6_1:88191712-88191731 None:intergenic 40.0%
TTGCATACATGGTTGCAAGT+AGG + chr6_1:88191713-88191732 None:intergenic 40.0%
TAAGACTAGGGAAATGCGTT+TGG - chr6_1:88191754-88191773 Msa0896990:CDS 40.0%
! GTGCCTGAATGAATTTGCTT+TGG + chr6_1:88192034-88192053 None:intergenic 40.0%
ATTTCACCAACTACTAGTGG+TGG - chr6_1:88192370-88192389 Msa0896990:intron 40.0%
! GCCAGAGTACAATTTTGTAC+GGG - chr6_1:88192404-88192423 Msa0896990:intron 40.0%
! CCAGAGTACAATTTTGTACG+GGG - chr6_1:88192405-88192424 Msa0896990:intron 40.0%
!!! CACTTCTCTTTTTTGGGCTT+CGG - chr6_1:88192488-88192507 Msa0896990:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr6_1:88192837-88192856 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr6_1:88192837-88192856 Msa0896990:intron 40.0%
CACAACCATGCATATCTTCT+TGG - chr6_1:88192964-88192983 Msa0896990:intron 40.0%
GAGTTCCAAGAAGATATGCA+TGG + chr6_1:88192972-88192991 None:intergenic 40.0%
ATAATGCGCGAGAAACTCAT+AGG + chr6_1:88193308-88193327 None:intergenic 40.0%
GGGTAAAGAGCAGAATTCAT+GGG + chr6_1:88193470-88193489 None:intergenic 40.0%
TGGGTAAAGAGCAGAATTCA+TGG + chr6_1:88193471-88193490 None:intergenic 40.0%
ACACTACAGATCCTAGTCAT+GGG + chr6_1:88193683-88193702 None:intergenic 40.0%
TAGATGCACACTCTTTCATG+TGG + chr6_1:88194115-88194134 None:intergenic 40.0%
! ATATGGTGAGCTGTCTTTTG+AGG + chr6_1:88194193-88194212 None:intergenic 40.0%
TATTGCATTCAGGTCTTGCT+TGG + chr6_1:88194420-88194439 None:intergenic 40.0%
AGCTTCTGCTTATTGCATTC+AGG + chr6_1:88194430-88194449 None:intergenic 40.0%
AGCAGAAGCTGCTTCAAATT+TGG - chr6_1:88194440-88194459 Msa0896990:intron 40.0%
CTGACATATCTAACTAGACG+TGG - chr6_1:88194552-88194571 Msa0896990:intron 40.0%
GACATATCTAACTAGACGTG+GGG - chr6_1:88194554-88194573 Msa0896990:intron 40.0%
! TGGGAGTTTGTAGGTGTTAT+AGG + chr6_1:88194713-88194732 None:intergenic 40.0%
ACACAGAAGGCAAAAAGGTT+CGG - chr6_1:88194876-88194895 Msa0896990:intron 40.0%
ATGTCCACTCAATGTTGTAG+TGG - chr6_1:88195009-88195028 Msa0896990:CDS 40.0%
TCAACCACTACAACATTGAG+TGG + chr6_1:88195016-88195035 None:intergenic 40.0%
ACTCAATGTTGTAGTGGTTG+AGG - chr6_1:88195015-88195034 Msa0896990:CDS 40.0%
CTCAATGTTGTAGTGGTTGA+GGG - chr6_1:88195016-88195035 Msa0896990:CDS 40.0%
ACCTTTCTTAGGGTTAACAG+GGG + chr6_1:88195068-88195087 None:intergenic 40.0%
CACCTTTCTTAGGGTTAACA+GGG + chr6_1:88195069-88195088 None:intergenic 40.0%
ACACCTTTCTTAGGGTTAAC+AGG + chr6_1:88195070-88195089 None:intergenic 40.0%
TTGATTCCTCATCTGGACAA+TGG - chr6_1:88195173-88195192 Msa0896990:intron 40.0%
! TAAGCTTGTGTTTTGCCCTA+CGG - chr6_1:88195282-88195301 Msa0896990:CDS 40.0%
TGCAGAAATCACATACCGTA+GGG + chr6_1:88195300-88195319 None:intergenic 40.0%
TTGCAGAAATCACATACCGT+AGG + chr6_1:88195301-88195320 None:intergenic 40.0%
TACGGTATGTGATTTCTGCA+AGG - chr6_1:88195300-88195319 Msa0896990:CDS 40.0%
! GGGTCTTTAGGGATAGTAAT+GGG - chr6_1:88195341-88195360 Msa0896990:CDS 40.0%
CTGATGTGCCATACAAAGTT+AGG - chr6_1:88195383-88195402 Msa0896990:CDS 40.0%
GGTTGGAACCTAACTTTGTA+TGG + chr6_1:88195394-88195413 None:intergenic 40.0%
ATCAGTTCGAAGCTTCTTCC+CGG + chr6_1:88187907-88187926 None:intergenic 45.0%
AAATATCTCCACCATTCGCC+GGG + chr6_1:88187947-88187966 None:intergenic 45.0%
GAAATATCTCCACCATTCGC+CGG + chr6_1:88187948-88187967 None:intergenic 45.0%
GTGAAACATAGACAAGGCCT+TGG - chr6_1:88188014-88188033 Msa0896990:CDS 45.0%
!! AAGGCCTTGGTTTTCCACTA+AGG - chr6_1:88188027-88188046 Msa0896990:CDS 45.0%
TGCAAGAAGGACACACATGA+GGG + chr6_1:88188283-88188302 None:intergenic 45.0%
TTGCAAGAAGGACACACATG+AGG + chr6_1:88188284-88188303 None:intergenic 45.0%
CTACTCGAGTCACATTCCAA+AGG + chr6_1:88189847-88189866 None:intergenic 45.0%
AGCCGATAGCGAAATCTGAT+AGG - chr6_1:88189865-88189884 Msa0896990:intron 45.0%
AATGAGTTGTGGGGTTCATG+CGG + chr6_1:88190125-88190144 None:intergenic 45.0%
! TAGATTAGTTGGTTGGCAGG+GGG - chr6_1:88190426-88190445 Msa0896990:intron 45.0%
TTGTCTTCGCAACCACTACT+TGG - chr6_1:88191221-88191240 Msa0896990:intron 45.0%
GCTTCAGTTGATCCAAGTAG+TGG + chr6_1:88191236-88191255 None:intergenic 45.0%
! TTAACGGGTGTGAACCTCAA+CGG + chr6_1:88191449-88191468 None:intergenic 45.0%
GTCCTAACCATTCCTTAGTG+TGG - chr6_1:88191543-88191562 Msa0896990:intron 45.0%
AATGGTGTATTGGGAAACCC+GGG - chr6_1:88191608-88191627 Msa0896990:CDS 45.0%
TTGCAAGTAGGGCACACATT+AGG + chr6_1:88191701-88191720 None:intergenic 45.0%
CAAACAAGCGTTTGTCCGTT+AGG + chr6_1:88192002-88192021 None:intergenic 45.0%
! CTAACGGACAAACGCTTGTT+TGG - chr6_1:88192000-88192019 Msa0896990:CDS 45.0%
CACAATGTACTCTCGTACGA+AGG + chr6_1:88192245-88192264 None:intergenic 45.0%
TTGAGTCCACCACTAGTAGT+TGG + chr6_1:88192379-88192398 None:intergenic 45.0%
CCCCGTACAAAATTGTACTC+TGG + chr6_1:88192408-88192427 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr6_1:88192836-88192855 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr6_1:88192836-88192855 Msa0896990:intron 45.0%
GGGACTGAGCAAAACTGTTT+GGG + chr6_1:88193490-88193509 None:intergenic 45.0%
TGGGACTGAGCAAAACTGTT+TGG + chr6_1:88193491-88193510 None:intergenic 45.0%
! GCGCATGTTAAGTTGCATAG+GGG + chr6_1:88193532-88193551 None:intergenic 45.0%
! GGCGCATGTTAAGTTGCATA+GGG + chr6_1:88193533-88193552 None:intergenic 45.0%
! TGGCGCATGTTAAGTTGCAT+AGG + chr6_1:88193534-88193553 None:intergenic 45.0%
AGTCACGCTAGTGTAAACAC+TGG - chr6_1:88193645-88193664 Msa0896990:intron 45.0%
CACTACAGATCCTAGTCATG+GGG + chr6_1:88193682-88193701 None:intergenic 45.0%
CACACTACAGATCCTAGTCA+TGG + chr6_1:88193684-88193703 None:intergenic 45.0%
AAGCGTGAGTTAACTCACGA+TGG - chr6_1:88193761-88193780 Msa0896990:intron 45.0%
! GTGTCACTGTCATTCTGTTC+TGG + chr6_1:88193822-88193841 None:intergenic 45.0%
GTAACGTTGCGCAACTAACT+TGG - chr6_1:88193850-88193869 Msa0896990:intron 45.0%
!! AAGAGAGATTTTGGTGGGGT+GGG + chr6_1:88194162-88194181 None:intergenic 45.0%
!! TAAGAGAGATTTTGGTGGGG+TGG + chr6_1:88194163-88194182 None:intergenic 45.0%
TCTAACTAGACGTGGGGAAT+TGG - chr6_1:88194560-88194579 Msa0896990:intron 45.0%
GGTTGACACAGAAGGCAAAA+AGG - chr6_1:88194871-88194890 Msa0896990:intron 45.0%
CACAGAAGGCAAAAAGGTTC+GGG - chr6_1:88194877-88194896 Msa0896990:intron 45.0%
TCGGATGTAGTAGTCTACTC+CGG + chr6_1:88194903-88194922 None:intergenic 45.0%
AAACCACTACCGACAACACA+AGG + chr6_1:88194959-88194978 None:intergenic 45.0%
TTGAGTGGACATGTCTCGTT+TGG + chr6_1:88195001-88195020 None:intergenic 45.0%
ACCCCTGTTAACCCTAAGAA+AGG - chr6_1:88195064-88195083 Msa0896990:CDS 45.0%
CATGTGAAGAGTCCACGATA+TGG - chr6_1:88195137-88195156 Msa0896990:CDS 45.0%
ATCATCAAGCGTCCATATCG+TGG + chr6_1:88195152-88195171 None:intergenic 45.0%
GACAAACCATTGTCCAGATG+AGG + chr6_1:88195182-88195201 None:intergenic 45.0%
! GGACAATGGTTTGTCACTAC+CGG - chr6_1:88195187-88195206 Msa0896990:intron 45.0%
! AATGGTTTGTCACTACCGGT+GGG - chr6_1:88195191-88195210 Msa0896990:intron 45.0%
ATTTCTGCAAGGTCATGTGC+AGG - chr6_1:88195311-88195330 Msa0896990:CDS 45.0%
AAGGTCATGTGCAGGAATGT+TGG - chr6_1:88195319-88195338 Msa0896990:CDS 45.0%
AGGTCATGTGCAGGAATGTT+GGG - chr6_1:88195320-88195339 Msa0896990:CDS 45.0%
CAGGAATGTTGGGGTCTTTA+GGG - chr6_1:88195330-88195349 Msa0896990:CDS 45.0%
! GGGGTCTTTAGGGATAGTAA+TGG - chr6_1:88195340-88195359 Msa0896990:CDS 45.0%
!! TTTAATATATGATTAATTAT+TGG - chr6_1:88189247-88189266 Msa0896990:intron 5.0%
!! TTAATATATGATTAATTATT+GGG - chr6_1:88189248-88189267 Msa0896990:intron 5.0%
!!! AAAAAATTATAATTATTTTG+GGG - chr6_1:88189562-88189581 Msa0896990:intron 5.0%
!! ATTCAAAATAAAATAATTAA+GGG + chr6_1:88189787-88189806 None:intergenic 5.0%
GTGAGGACAATGCAAGGAGA+AGG + chr6_1:88187833-88187852 None:intergenic 50.0%
GTGGTTGTGAGGACAATGCA+AGG + chr6_1:88187839-88187858 None:intergenic 50.0%
CGCCGGGATGATGTAGTAAT+CGG + chr6_1:88187931-88187950 None:intergenic 50.0%
TACTACATCATCCCGGCGAA+TGG - chr6_1:88187933-88187952 Msa0896990:CDS 50.0%
GGCATTGCTCTTGAAACCGT+CGG - chr6_1:88191374-88191393 Msa0896990:intron 50.0%
AAGAGGGCAAGATTCTCCGA+CGG + chr6_1:88191393-88191412 None:intergenic 50.0%
AGAACGCGCGAGAAACTCAT+AGG - chr6_1:88193417-88193436 Msa0896990:intron 50.0%
GAACGCGCGAGAAACTCATA+GGG - chr6_1:88193418-88193437 Msa0896990:intron 50.0%
AGCGTGAGCTAACATGCGTA+AGG - chr6_1:88194001-88194020 Msa0896990:intron 50.0%
GCGTGAGCTAACATGCGTAA+GGG - chr6_1:88194002-88194021 Msa0896990:intron 50.0%
!! AGAGAGATTTTGGTGGGGTG+GGG + chr6_1:88194161-88194180 None:intergenic 50.0%
!! TGGTGAGCTGTCTTTTGAGG+TGG + chr6_1:88194190-88194209 None:intergenic 50.0%
TCTTGCTTGGAGGGTGAATG+AGG + chr6_1:88194407-88194426 None:intergenic 50.0%
GCATTCAGGTCTTGCTTGGA+GGG + chr6_1:88194416-88194435 None:intergenic 50.0%
TGCATTCAGGTCTTGCTTGG+AGG + chr6_1:88194417-88194436 None:intergenic 50.0%
TCTGTGTCAACCACTTGCTC+AGG + chr6_1:88194863-88194882 None:intergenic 50.0%
GAGCAAGTGGTTGACACAGA+AGG - chr6_1:88194863-88194882 Msa0896990:intron 50.0%
! GTAGTGGTTGAGGGTTTTCG+TGG - chr6_1:88195025-88195044 Msa0896990:CDS 50.0%
! GTTGAGGGTTTTCGTGGTCA+AGG - chr6_1:88195031-88195050 Msa0896990:CDS 50.0%
! CAATGGTTTGTCACTACCGG+TGG - chr6_1:88195190-88195209 Msa0896990:intron 50.0%
! ATGGTTTGTCACTACCGGTG+GGG - chr6_1:88195192-88195211 Msa0896990:intron 50.0%
ATTGTCAACGGTGTCCTTGC+CGG + chr6_1:88195230-88195249 None:intergenic 50.0%
GCAAGGACACCGTTGACAAT+TGG - chr6_1:88195230-88195249 Msa0896990:intron 50.0%
GGTCATGTGCAGGAATGTTG+GGG - chr6_1:88195321-88195340 Msa0896990:CDS 50.0%
GCAGGAATGTTGGGGTCTTT+AGG - chr6_1:88195329-88195348 Msa0896990:CDS 50.0%
! TAGTAATGGGAACCAGCGTG+TGG - chr6_1:88195354-88195373 Msa0896990:CDS 50.0%
TACATCATCCCGGCGAATGG+TGG - chr6_1:88187936-88187955 Msa0896990:CDS 55.0%
TTAGTTGGTTGGCAGGGGGT+TGG - chr6_1:88190430-88190449 Msa0896990:intron 55.0%
TCAGAGCATGCCCCATGACT+AGG - chr6_1:88193669-88193688 Msa0896990:intron 55.0%
! GTGTCACTGCCAGTCTGTTC+TGG + chr6_1:88193800-88193819 None:intergenic 55.0%
!! AGAGATTTTGGTGGGGTGGG+GGG + chr6_1:88194159-88194178 None:intergenic 55.0%
!! GAGAGATTTTGGTGGGGTGG+GGG + chr6_1:88194160-88194179 None:intergenic 55.0%
TTGTCCACCCAACCCTTGCT+CGG - chr6_1:88194821-88194840 Msa0896990:intron 55.0%
AGCTTCTCCGAGCAAGGGTT+GGG + chr6_1:88194831-88194850 None:intergenic 55.0%
TGACGCTTCACCTGAGCAAG+TGG - chr6_1:88194850-88194869 Msa0896990:intron 55.0%
GAAGGCAAAAAGGTTCGGGC+CGG - chr6_1:88194881-88194900 Msa0896990:intron 55.0%
GGGATTTCCAAGAACCCCAC+CGG + chr6_1:88195209-88195228 None:intergenic 55.0%
GGTGGGGTTCTTGGAAATCC+CGG - chr6_1:88195208-88195227 Msa0896990:intron 55.0%
GGTTCTTGGAAATCCCGGCA+AGG - chr6_1:88195213-88195232 Msa0896990:intron 55.0%
TTGTCAACGGTGTCCTTGCC+GGG + chr6_1:88195229-88195248 None:intergenic 55.0%
CTGCTCGCACCAGAACAGAC+TGG - chr6_1:88193788-88193807 Msa0896990:intron 60.0%
GAGCAAGGGTTGGGTGGACA+AGG + chr6_1:88194822-88194841 None:intergenic 60.0%
TTCTCCGAGCAAGGGTTGGG+TGG + chr6_1:88194828-88194847 None:intergenic 60.0%
CAGCTTCTCCGAGCAAGGGT+TGG + chr6_1:88194832-88194851 None:intergenic 60.0%
GCGTCAGCTTCTCCGAGCAA+GGG + chr6_1:88194836-88194855 None:intergenic 60.0%
AGCGTCAGCTTCTCCGAGCA+AGG + chr6_1:88194837-88194856 None:intergenic 60.0%
! ATGGGGTTGTCGGGACTGGT+CGG + chr6_1:88194922-88194941 None:intergenic 60.0%
TCACATGGGGTTGTCGGGAC+TGG + chr6_1:88194926-88194945 None:intergenic 60.0%
GTCCCGACAACCCCATGTGA+CGG - chr6_1:88194926-88194945 Msa0896990:intron 60.0%
GACCGTCACATGGGGTTGTC+GGG + chr6_1:88194931-88194950 None:intergenic 60.0%
CGACCGTCACATGGGGTTGT+CGG + chr6_1:88194932-88194951 None:intergenic 60.0%
ACAACCCCATGTGACGGTCG+TGG - chr6_1:88194932-88194951 Msa0896990:intron 60.0%
CAACCCCATGTGACGGTCGT+GGG - chr6_1:88194933-88194952 Msa0896990:intron 60.0%
AAGGCCCACGACCGTCACAT+GGG + chr6_1:88194940-88194959 None:intergenic 60.0%
! GGTCGTGGGCCTTGTGTTGT+CGG - chr6_1:88194947-88194966 Msa0896990:CDS 60.0%
! GGGCCTTGTGTTGTCGGTAG+TGG - chr6_1:88194953-88194972 Msa0896990:CDS 60.0%
GTCACTACCGGTGGGGTTCT+TGG - chr6_1:88195199-88195218 Msa0896990:intron 60.0%
CATCAGTGAGAGCCACACGC+TGG + chr6_1:88195369-88195388 None:intergenic 60.0%
GGGGCACGACCACCCTACAA+TGG + chr6_1:88190237-88190256 None:intergenic 65.0%
AGGCCCACGACCGTCACATG+GGG + chr6_1:88194939-88194958 None:intergenic 65.0%
CAAGGCCCACGACCGTCACA+TGG + chr6_1:88194941-88194960 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 88187801 88195423 88187801 ID=Msa0896990;Name=Msa0896990
chr6_1 mRNA 88187801 88195423 88187801 ID=Msa0896990-mRNA-1;Parent=Msa0896990;Name=Msa0896990-mRNA-1;_AED=0.13;_eAED=0.14;_QI=0|0|0|1|0|0|6|0|469
chr6_1 exon 88195270 88195423 88195270 ID=Msa0896990-mRNA-1:exon:14931;Parent=Msa0896990-mRNA-1
chr6_1 exon 88195220 88195247 88195220 ID=Msa0896990-mRNA-1:exon:14930;Parent=Msa0896990-mRNA-1
chr6_1 exon 88194938 88195175 88194938 ID=Msa0896990-mRNA-1:exon:14929;Parent=Msa0896990-mRNA-1
chr6_1 exon 88191868 88192036 88191868 ID=Msa0896990-mRNA-1:exon:14928;Parent=Msa0896990-mRNA-1
chr6_1 exon 88191595 88191783 88191595 ID=Msa0896990-mRNA-1:exon:14927;Parent=Msa0896990-mRNA-1
chr6_1 exon 88187801 88188432 88187801 ID=Msa0896990-mRNA-1:exon:14926;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88195270 88195423 88195270 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88195220 88195247 88195220 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88194938 88195175 88194938 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88191868 88192036 88191868 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88191595 88191783 88191595 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
chr6_1 CDS 88187801 88188432 88187801 ID=Msa0896990-mRNA-1:cds;Parent=Msa0896990-mRNA-1
Gene Sequence

>Msa0896990

ATGAAGAGCACAACATTGCTAGCACTTTTCCTTCTCCTTGCATTGTCCTCACAACCACTACTTGTATTATCTAAAGCTTCACTCAGTCAAGTCTTTGACATAACCGGGAAGAAGCTTCGAACTGATTCCGATTACTACATCATCCCGGCGAATGTTCTATCGGTGAATCTTGCCCTCTTCATGTTTGCACCCATTAAAGGTGATATTCGTGTCTCCACTGATCTCAATATTATGCTAGGTAATGCTGATGATAGGTGTCCTTATAACTATTCAGTAGTGTGGAAGATTGATCCTTCTTCTAAGGTAGCAACATTTGTGACCACTAATGGTATATTAGGTCACCCGGGTTCGAATTCAATTCATAGTTGGTTCAAGATTGAGAAGTATGATGATGCTTATAAGTTGGTCTATTGCCCTCATAGTACAATGCTAGCATTTCTTCTTCTCTTTGCATTGTCTTCGCAACCACTACTTGGATCAACTGAAGCTTCACCCGATCAAGTCATTGACACATCGGGCAAGAAGCTTCGAGCTGATACCAATTACTACATCATTCCGGCTAAGCCATTTACAATATGTGGCTTTGTTAGTTTACCGTTGAGGTTCACACCCGTTAACAACAAGAAAGGCGTTATTCGTGTCTCCACTGATCTCAACATAAAGTTCTCTAATGATGCTTATGATTCTAGATGTCCTAACCATTCCTTAGTGTGGAAGATTGATCCTTTTTCTAAAGAAGAAACATTTGTGACTACTAATGGTGTATTGGGAAACCCGGTATACATATTATTTGCACTTCTCTTTGCCTTGTCCACCCAACCCTTGCTCGGAGAAGCTGACGCTTCACCTGAGCAAGTGGTTGACACAGAAGGCAAAAAGGTTCGGGCCGGAGTAGACTACTACATCCGACCAGTCCCGACAACCCCATGTGACGGTCGTGGGCCTTGTGTTGTCGGTAGTGGTTTTGTTCTCGTAGCAAGATCACCAAACGAGACATGTCCACTCAATGTTGTAGTGGTTGAGGGTTTTCGTGGTCAAGGAGTAACGTTTACCCCTGTTAACCCTAAGAAAGGTGTTATTAGGGTTTCCACTGATCTTAACATCAAGACATCCCTTAATACAGCATGTGAAGAGTCCACGATATGGACGCTTGATGATTTTGATTCCTCATCTGGACAATGGTTTGTCACTACCGGTGGGGTTCTTGGAAATCCCGGCAAGGACACCGTTGACAATTGGTTCAAGATTGAAAAGTATGAAGATGACTATAAGCTTGTGTTTTGCCCTACGGTATGTGATTTCTGCAAGGTCATGTGCAGGAATGTTGGGGTCTTTAGGGATAGTAATGGGAACCAGCGTGTGGCTCTCACTGATGTGCCATACAAAGTTAGGTTCCAACCATCTGCTTGA

Protein sequence

>Msa0896990

MKSTTLLALFLLLALSSQPLLVLSKASLSQVFDITGKKLRTDSDYYIIPANVLSVNLALFMFAPIKGDIRVSTDLNIMLGNADDRCPYNYSVVWKIDPSSKVATFVTTNGILGHPGSNSIHSWFKIEKYDDAYKLVYCPHSTMLAFLLLFALSSQPLLGSTEASPDQVIDTSGKKLRADTNYYIIPAKPFTICGFVSLPLRFTPVNNKKGVIRVSTDLNIKFSNDAYDSRCPNHSLVWKIDPFSKEETFVTTNGVLGNPVYILFALLFALSTQPLLGEADASPEQVVDTEGKKVRAGVDYYIRPVPTTPCDGRGPCVVGSGFVLVARSPNETCPLNVVVVEGFRGQGVTFTPVNPKKGVIRVSTDLNIKTSLNTACEESTIWTLDDFDSSSGQWFVTTGGVLGNPGKDTVDNWFKIEKYEDDYKLVFCPTVCDFCKVMCRNVGVFRDSNGNQRVALTDVPYKVRFQPSA*