AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807170 MtrunA17_Chr5g0398431 96.976 496 15 0 1 496 1 496 0.0 1002
Msa0807170 MtrunA17_Chr6g0475681 54.000 500 222 4 1 494 30 527 0.0 561
Msa0807170 MtrunA17_Chr6g0488041 43.521 409 223 3 84 488 26 430 3.07e-131 388
Msa0807170 MtrunA17_Chr8g0389311 42.752 407 223 3 84 488 24 422 2.70e-128 380
Msa0807170 MtrunA17_Chr8g0389321 42.752 407 223 3 84 488 24 422 2.70e-128 380
Msa0807170 MtrunA17_Chr4g0054371 41.687 415 232 3 84 488 16 430 5.89e-126 375
Msa0807170 MtrunA17_Chr3g0135251 43.237 414 229 3 84 492 14 426 2.30e-124 371
Msa0807170 MtrunA17_Chr5g0400831 41.546 414 233 4 84 488 16 429 1.60e-122 367
Msa0807170 MtrunA17_Chr8g0387481 40.786 407 238 1 85 488 25 431 6.84e-121 363
Msa0807170 MtrunA17_Chr8g0348351 39.506 405 245 0 84 488 23 427 7.78e-117 352
Msa0807170 MtrunA17_Chr7g0248681 39.225 413 250 1 77 488 16 428 1.00e-112 342
Msa0807170 MtrunA17_Chr8g0345201 21.622 333 238 11 178 488 180 511 1.98e-13 72.4
Msa0807170 MtrunA17_Chr5g0412871 25.175 143 104 3 178 318 129 270 1.51e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807170 AT1G62960.1 55.744 531 189 10 1 494 31 552 0.0 579
Msa0807170 AT5G51690.1 52.104 499 227 6 1 494 1 492 0.0 551
Msa0807170 AT5G51690.2 53.911 358 162 1 140 494 12 369 4.09e-148 428
Msa0807170 AT4G37770.1 44.844 417 226 1 84 496 16 432 2.72e-132 392
Msa0807170 AT4G26200.1 43.133 415 233 2 77 488 23 437 1.28e-125 374
Msa0807170 AT3G49700.1 43.510 416 231 1 84 495 16 431 1.00e-122 367
Msa0807170 AT5G65800.1 42.788 416 234 2 84 495 16 431 6.32e-121 363
Msa0807170 AT2G22810.1 42.054 409 232 3 85 488 17 425 6.10e-120 360
Msa0807170 AT4G11280.1 40.244 410 243 2 84 492 27 435 1.16e-118 358
Msa0807170 AT4G08040.1 40.686 408 237 3 84 488 14 419 8.88e-117 352
Msa0807170 AT3G61510.1 41.422 408 229 4 85 488 24 425 1.02e-114 347
Msa0807170 AT1G01480.1 37.264 424 256 3 75 488 9 432 1.91e-110 337
Msa0807170 AT1G01480.2 38.050 318 193 2 175 488 9 326 1.84e-87 274
Msa0807170 AT1G72330.1 20.659 334 240 10 178 488 196 527 2.36e-16 82.0
Msa0807170 AT1G72330.3 20.173 347 239 10 178 488 196 540 6.55e-15 77.8
Msa0807170 AT1G17290.1 20.120 333 243 10 178 488 199 530 1.19e-14 77.0
Msa0807170 AT1G23310.2 25.175 143 104 3 178 318 129 270 3.63e-12 68.6
Msa0807170 AT1G23310.1 25.175 143 104 3 178 318 129 270 4.44e-12 68.6
Msa0807170 AT1G72330.2 21.795 156 119 3 178 331 196 350 1.65e-11 66.6

Find 387 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATTCAGGTTATGAAATT+AGG 0.120389 5_3:-27988919 Msa0807180:CDS
AGGAAAGTTGCTACCTATTT+TGG 0.124064 5_3:-27989202 Msa0807180:CDS
ACCTTGAGTTCATGGGTTTC+TGG 0.142223 5_3:-27991424 Msa0807180:CDS
ATATTGTCTTTATTCGTTAA+AGG 0.163731 5_3:-27988508 Msa0807180:three_prime_UTR
AGTCTAATGCATTTGGATTT+TGG 0.170035 5_3:-27990845 Msa0807180:CDS
AACCGCATCCGTTCATATTT+CGG 0.176135 5_3:+27985738 Msa0807170:CDS
AATAATAACTCACGGTGTTT+TGG 0.197413 5_3:-27985879 None:intergenic
TGGTGACCATCATGAGTATT+AGG 0.199260 5_3:-27989851 Msa0807180:CDS
GCCATGCTTGGTCTTCTTAA+AGG 0.199453 5_3:+27988874 Msa0807170:three_prime_UTR
ATAATCTCTAATGAAATATT+TGG 0.209776 5_3:+27987667 Msa0807170:CDS
AGAGTATGTTAGAGGATTTA+AGG 0.210033 5_3:+27989265 Msa0807170:three_prime_UTR
ACCGCATCCGTTCATATTTC+GGG 0.225078 5_3:+27985739 Msa0807170:CDS
CATTGAACTGCTTGAATTGC+TGG 0.225883 5_3:-27990492 Msa0807180:CDS
CTGAGTTCGCTGTTGTGTTT+TGG 0.226674 5_3:-27985333 None:intergenic
GGACTATTGGTTATCAAATT+AGG 0.226861 5_3:-27990557 Msa0807180:CDS
TTGAGGATATTGACATTGTT+TGG 0.227211 5_3:-27991277 Msa0807180:CDS
GCTTCATTCTCTGTTTGTTT+TGG 0.227442 5_3:-27991528 Msa0807180:CDS
GAATCATCAAATGTTATAAT+TGG 0.227804 5_3:-27989762 Msa0807180:CDS
GAGGAATTCGAAAATGAAAT+TGG 0.228338 5_3:-27989549 Msa0807180:CDS
GCTGCAGCTGTGATTCTAAC+TGG 0.231701 5_3:-27989882 Msa0807180:CDS
TTGTCCTTCAAACCCATTAT+AGG 0.232527 5_3:+27990751 Msa0807170:three_prime_UTR
CCTCTACTTGTGCTGGTTCC+AGG 0.236355 5_3:+27989393 Msa0807170:three_prime_UTR
ATTGCAACAATACAGCATTT+TGG 0.237823 5_3:-27990044 Msa0807180:CDS
AGTGTGGAAGAGCACGTTTC+TGG 0.238811 5_3:-27990875 Msa0807180:CDS
TATTTCAATATATCCTATAA+TGG 0.241003 5_3:-27990764 Msa0807180:CDS
TGATGCTTCAGGGAATAATT+TGG 0.244911 5_3:-27990687 Msa0807180:CDS
ATTTGTAACATTGCAATAAA+AGG 0.246407 5_3:-27988636 Msa0807180:three_prime_UTR
CAGTTTCGGTGTCATTCTTT+TGG 0.253403 5_3:-27989085 Msa0807180:CDS
AGGAGAGTCAGTTGCGATTA+TGG 0.261623 5_3:-27985773 None:intergenic
TTGCAGTTCCAAGTGCAATT+TGG 0.264467 5_3:+27989340 Msa0807170:three_prime_UTR
GAAGCCAAGTTATCTGATTA+TGG 0.267090 5_3:-27989228 Msa0807180:CDS
GAATTTCGCCGATGAGGTTT+AGG 0.273951 5_3:+27990459 Msa0807170:three_prime_UTR
TGCTGTATTGTTGCAATATC+AGG 0.279650 5_3:+27990050 Msa0807170:three_prime_UTR
TTAGTGGTCTTTGATGCTTC+AGG 0.294749 5_3:-27990698 Msa0807180:CDS
GCAAAAGCCACCACTGCTTC+TGG 0.296696 5_3:-27988031 Msa0807180:three_prime_UTR
TGTTGAGAATGAATTGATTC+AGG 0.298655 5_3:-27988932 Msa0807180:CDS
AAGTTATCTGATTATGGATT+AGG 0.300227 5_3:-27989222 Msa0807180:CDS
AAACCTCATCGGCGAAATTC+CGG 0.301654 5_3:-27990456 Msa0807180:CDS
CGCAATTCTTGAATATCAAC+TGG 0.303538 5_3:+27990581 Msa0807170:three_prime_UTR
GGAGATCCGGATTGACATTA+GGG 0.309731 5_3:-27988723 Msa0807180:three_prime_UTR
TTCATCTAAGAGTATGTTAG+AGG 0.310624 5_3:+27989257 Msa0807170:three_prime_UTR
CTGAGAAGCAATGCCTTATC+AGG 0.317990 5_3:-27990899 Msa0807180:CDS
TACCATCAAAATATGAAGAT+TGG 0.320938 5_3:-27989713 Msa0807180:CDS
GGTAGAAGAAGTAGATATAA+TGG 0.325377 5_3:-27991834 None:intergenic
TGGTTTCATGTCTCAAGTTT+TGG 0.325778 5_3:+27987188 Msa0807170:CDS
AAATCTAGAAAACGAATATT+AGG 0.330922 5_3:+27991139 Msa0807170:three_prime_UTR
TGGTTCAATTCCTGTGTCTT+TGG 0.333500 5_3:-27991023 Msa0807180:CDS
CTTTCTCATAACAATCTTGT+TGG 0.337524 5_3:-27991043 Msa0807180:CDS
AGGAGATCCGGATTGACATT+AGG 0.340373 5_3:-27988724 Msa0807180:three_prime_UTR
TCAAGAATTGCGAGGACTAT+TGG 0.342192 5_3:-27990570 Msa0807180:CDS
CTTAATAATTACATTCTTCA+AGG 0.343576 5_3:-27988757 Msa0807180:three_prime_UTR
GTAAGAAGTTTGTTGGAAAC+TGG 0.343906 5_3:-27988994 Msa0807180:CDS
CAAGGAGTTGTCCAAGGAAC+AGG 0.345132 5_3:+27985559 Msa0807170:CDS
AGATACCTTCAGCTTTGTTT+AGG 0.347911 5_3:-27991093 Msa0807180:CDS
TGATTCAGGTTATGAAATTA+GGG 0.348840 5_3:-27988918 Msa0807180:CDS
AATGGGTAGTAGTAGTAGTT+TGG 0.349669 5_3:-27991816 None:intergenic
ATGAATTATGTGATAGATCT+AGG 0.350426 5_3:+27990159 Msa0807170:three_prime_UTR
CTAACTAACTCTTTATCAAT+TGG 0.350981 5_3:-27985362 None:intergenic
CTAGGAATTGGATCCTTGAT+AGG 0.354424 5_3:+27990177 Msa0807170:three_prime_UTR
ACCGCAGAGAAAAGGATTAT+TGG 0.354473 5_3:+27990007 Msa0807170:three_prime_UTR
TGCTACTTACCATGGATTCA+TGG 0.356282 5_3:+27986209 Msa0807170:CDS
GGGAATTATATTGGTCTAGA+AGG 0.357515 5_3:-27989365 Msa0807180:CDS
GATTCTAACTGGGGTTTGTT+TGG 0.358415 5_3:-27989871 Msa0807180:CDS
AATCCAAATGCATTAGACTA+TGG 0.359221 5_3:+27990849 Msa0807170:three_prime_UTR
TCACTACATGCAGTGATATC+AGG 0.359968 5_3:+27990725 Msa0807170:three_prime_UTR
AGAAACACTACTTGATCTTC+TGG 0.360922 5_3:+27987618 Msa0807170:CDS
ATTTCAATATATCCTATAAT+GGG 0.362537 5_3:-27990763 Msa0807180:CDS
AGTTCATATAGTGTTTGATT+TGG 0.363982 5_3:+27987765 Msa0807170:CDS
ATGCCATAGTCTAATGCATT+TGG 0.366711 5_3:-27990852 Msa0807180:CDS
TGTGAAGGGTTGAAGAAAAC+TGG 0.369060 5_3:-27987216 None:intergenic
CCTATTGCCTCTACTTGTGC+TGG 0.369621 5_3:+27989386 Msa0807170:three_prime_UTR
ATTATTTCTGCAAATTTCAT+TGG 0.370391 5_3:+27988286 Msa0807170:three_prime_UTR
CAACTAAATTACAGTGTTGA+AGG 0.372986 5_3:+27989514 Msa0807170:three_prime_UTR
GTCACGCTCTCTCTCAGTTC+GGG 0.374930 5_3:+27985705 Msa0807170:CDS
AGCTTCTGCCTAGCAGATAA+TGG 0.376523 5_3:+27987282 Msa0807170:CDS
CACACAATACCTTGAGTTCA+TGG 0.376536 5_3:-27991432 Msa0807180:CDS
TAGTAATAGATTTACTGATT+TGG 0.380646 5_3:-27990822 Msa0807180:CDS
AAATGTTATAATTGGAAAGT+TGG 0.382735 5_3:-27989754 Msa0807180:CDS
TGAGGATATTGACATTGTTT+GGG 0.383055 5_3:-27991276 Msa0807180:CDS
AGTGAAGAAGCTTGAGACTT+TGG 0.383510 5_3:-27989589 Msa0807180:CDS
AGGATTATGAATCCGATGAT+AGG 0.384138 5_3:-27985830 None:intergenic
ATCCACAACATTCTCATTAT+AGG 0.385218 5_3:-27987833 None:intergenic
TTGTCAGAGTTTGTTTCAAA+TGG 0.386132 5_3:-27989450 Msa0807180:CDS
GTGAAGAAGCTTGAGACTTT+GGG 0.386866 5_3:-27989588 Msa0807180:CDS
GTTCCCACGCCTCATAGTCC+TGG 0.388688 5_3:+27987318 Msa0807170:CDS
TGAATATGTAAGAAGTTTGT+TGG 0.390348 5_3:-27989001 Msa0807180:CDS
TCTTCGCTTGGTTGAAAGCT+TGG 0.391216 5_3:-27987525 None:intergenic
GCTTTGATGAGGCCGTAAAA+TGG 0.391674 5_3:+27987428 Msa0807170:intron
TTTCTTCAACCCTTCACATA+TGG 0.391679 5_3:+27987221 Msa0807170:CDS
AGACCGAAATTATCCAAAAT+AGG 0.391697 5_3:+27989189 Msa0807170:three_prime_UTR
GGAATGTCACATAGTCTAGA+AGG 0.392031 5_3:+27990941 Msa0807170:three_prime_UTR
GTGTTGTCACCAGCACTCTC+AGG 0.393068 5_3:-27991310 Msa0807180:CDS
GAACTTAAAGCTCTTGTCCT+TGG 0.394546 5_3:-27990630 Msa0807180:CDS
AAGTGTGATGTTTACAGTTT+CGG 0.395564 5_3:-27989099 Msa0807180:CDS
CCAGCACAAGTAGAGGCAAT+AGG 0.397401 5_3:-27989386 Msa0807180:CDS
GGTGACCATCATGAGTATTA+GGG 0.397988 5_3:-27989850 Msa0807180:CDS
CTACATGGGCTTGGATATCC+TGG 0.398085 5_3:-27989411 Msa0807180:CDS
AATGGAAGCGCTGCTATACT+AGG 0.401042 5_3:+27986147 Msa0807170:CDS
GGTTGTTGGAAGGAGGAGAT+TGG 0.401069 5_3:-27985657 None:intergenic
CTTGACAAGGAGTCGTTGAT+AGG 0.401382 5_3:-27989669 Msa0807180:CDS
GGTTCAATCCCTCCTTCACT+TGG 0.404422 5_3:-27990131 Msa0807180:CDS
GTGAATTGCTCTAACCTTGA+AGG 0.406571 5_3:-27991001 Msa0807180:CDS
TGTCACGCTCTCTCTCAGTT+CGG 0.406751 5_3:+27985704 Msa0807170:CDS
TTTGACTACGTTTCTTCGCT+TGG 0.407338 5_3:-27987537 None:intergenic
GAGGCCGTAAAATGGCGATC+TGG 0.407730 5_3:+27987436 Msa0807170:CDS
ACCATCAAAATATGAAGATT+GGG 0.409063 5_3:-27989712 Msa0807180:CDS
TTCAGCTCCAATGCGTTATC+CGG 0.410427 5_3:-27991190 Msa0807180:CDS
GGCAAATCACCAATGAAATC+CGG 0.411470 5_3:+27991160 Msa0807170:three_prime_UTR
TATGTGATAGATCTAGGAAT+TGG 0.414284 5_3:+27990165 Msa0807170:three_prime_UTR
CTCCTTGTCAAGCAATGCTT+TGG 0.420567 5_3:+27989680 Msa0807170:three_prime_UTR
TATCAAAGAATGGCTTCAAT+GGG 0.420659 5_3:-27991117 Msa0807180:CDS
GTAATAAGCAATTGCTGAGT+TGG 0.421065 5_3:-27987895 Msa0807180:three_prime_UTR
TTCCAACAACCTTCCGCCTC+CGG 0.421274 5_3:+27985669 Msa0807170:CDS
TGCGTTATCCGGTTCGATCC+CGG 0.422061 5_3:-27991179 Msa0807180:CDS
CCTGATGGTGTTATTCAGCT+TGG 0.423048 5_3:+27985850 Msa0807170:CDS
TTTCTAGATTTATCAAAGAA+TGG 0.423501 5_3:-27991127 Msa0807180:CDS
GGTTCGATCCCGGATTTCAT+TGG 0.425083 5_3:-27991169 Msa0807180:CDS
TGTAATTTAGTTGCATTTCA+AGG 0.425710 5_3:-27989504 Msa0807180:CDS
CTGCAGCTGTGATTCTAACT+GGG 0.426250 5_3:-27989881 Msa0807180:CDS
CTCCGGAGGCGGAAGGTTGT+TGG 0.429612 5_3:-27985671 None:intergenic
GTGGAAGGATTAGAGCAGTT+GGG 0.430008 5_3:+27987997 Msa0807170:CDS
ATTCGTTCCTATAGTGAAAA+GGG 0.430876 5_3:+27988078 Msa0807170:CDS
TTGTTTAAACCAACGTGATA+AGG 0.431260 5_3:-27985793 None:intergenic
GTAGAAGAAGTAGATATAAT+GGG 0.433070 5_3:-27991833 None:intergenic
GATAGGTTTCCTAGGCTTGA+AGG 0.434249 5_3:+27990194 Msa0807170:three_prime_UTR
AATATACAAAACAAATAAAC+AGG 0.435213 5_3:-27988361 Msa0807180:three_prime_UTR
CATTCGTTCCTATAGTGAAA+AGG 0.435473 5_3:+27988077 Msa0807170:CDS
AGGATTTAAGGTTGAGGTGA+AGG 0.436093 5_3:+27989277 Msa0807170:three_prime_UTR
CGATTTAATAATTTGCCAGC+AGG 0.436573 5_3:-27987595 None:intergenic
TATGATAATCTACATGGGCT+TGG 0.439061 5_3:-27989420 Msa0807180:CDS
AATGAAATCCGGGATCGAAC+CGG 0.440617 5_3:+27991171 Msa0807170:three_prime_UTR
CTCTCATTCAACAATCTCTC+TGG 0.443432 5_3:-27990080 Msa0807180:CDS
TTATCAAAGAATGGCTTCAA+TGG 0.446628 5_3:-27991118 Msa0807180:CDS
TTGTAGAAAGAATTGTCCTT+TGG 0.448811 5_3:-27991351 Msa0807180:CDS
GAGGCAATAGGGAATTATAT+TGG 0.449063 5_3:-27989374 Msa0807180:CDS
TAGTGGTCTTTGATGCTTCA+GGG 0.450179 5_3:-27990697 Msa0807180:CDS
GGATCCTTGATAGGTTTCCT+AGG 0.450269 5_3:+27990186 Msa0807170:three_prime_UTR
AAGGGATGCTTCCCTTGAGC+TGG 0.451610 5_3:+27990213 Msa0807170:three_prime_UTR
TCCAACAGCATTGTGGAACT+TGG 0.452103 5_3:+27989164 Msa0807170:three_prime_UTR
AGGCCGTAAAATGGCGATCT+GGG 0.452160 5_3:+27987437 Msa0807170:CDS
TTGGCTCCATTCAGCATCCT+AGG 0.453075 5_3:-27990803 Msa0807180:CDS
AAACCTTGTATCTGAAATCA+TGG 0.453144 5_3:-27987917 Msa0807180:three_prime_UTR
TTGCTCAAGAGGACGGGTAT+TGG 0.453241 5_3:+27988382 Msa0807170:three_prime_UTR
CATGTAGCATTCTCATTAAG+AGG 0.453827 5_3:+27991720 Msa0807170:three_prime_UTR
ATCCGTTCATATTTCGGGTC+GGG 0.455221 5_3:+27985744 Msa0807170:CDS
CTAATCATACAGGTTGTGGC+TGG 0.455743 5_3:+27987168 Msa0807170:intron
TTGCATTTCAAGGTTACTAC+TGG 0.456933 5_3:-27989494 Msa0807180:CDS
CTTTGGAACACTAGCTTAGG+TGG 0.457740 5_3:-27991334 Msa0807180:CDS
ATATCCTATAATGGGTTTGA+AGG 0.458005 5_3:-27990755 Msa0807180:CDS
TGAGACGTCACCTTCAAAAT+CGG 0.458727 5_3:+27989617 Msa0807170:three_prime_UTR
CCTGTAGTAATGGAACGAAT+CGG 0.459030 5_3:+27988228 Msa0807170:CDS
GGTGTTGAGATAGGAATAGA+AGG 0.460500 5_3:-27985311 None:intergenic
GTCTTCCCAGGAGGTGAAGA+TGG 0.462324 5_3:+27989942 Msa0807170:three_prime_UTR
AAATATGAAGATTGGGAGGC+AGG 0.463881 5_3:-27989705 Msa0807180:CDS
CTCTTCCACACTACCTGATA+AGG 0.465052 5_3:+27990886 Msa0807170:three_prime_UTR
GCGACAATCATGGTGGAGAT+AGG 0.465629 5_3:+27989308 Msa0807170:three_prime_UTR
AAGGCGGGGAGCTCCGGAGG+CGG 0.467024 5_3:-27985682 None:intergenic
CAGCTTCAAACTGCTTTGAC+AGG 0.467394 5_3:-27988969 Msa0807180:CDS
CTGAGGCAACCACAATTTGA+TGG 0.468751 5_3:-27986174 None:intergenic
GAGAGAGAGCGTGACAAGGC+GGG 0.469486 5_3:-27985697 None:intergenic
CTGTAGTAATGGAACGAATC+GGG 0.469670 5_3:+27988229 Msa0807170:CDS
ACGAATAAAGACAATATTGA+GGG 0.469841 5_3:+27988514 Msa0807170:three_prime_UTR
GGAATGATTCCTGAGGGGTT+TGG 0.470126 5_3:-27990518 Msa0807180:CDS
GTGAGTTGGCAATGGTTTAG+TGG 0.472654 5_3:+27985508 Msa0807170:five_prime_UTR
TGAAGATCAGCATAATCATC+TGG 0.472985 5_3:+27991232 Msa0807170:three_prime_UTR
GCAGAAGCTTAGAATTTCAA+TGG 0.475169 5_3:-27987268 None:intergenic
CTCAAGCTTTGAGCCAACTC+TGG 0.476612 5_3:+27989132 Msa0807170:three_prime_UTR
AGATCGCCATCTTCACCTCC+TGG 0.478343 5_3:-27989948 Msa0807180:CDS
CATCAGTTCATGAATGTACT+CGG 0.479838 5_3:-27988448 Msa0807180:three_prime_UTR
CCGATTCGTTCCATTACTAC+AGG 0.480415 5_3:-27988228 Msa0807180:three_prime_UTR
TGTGAGCATGGCAGAAATCA+TGG 0.480730 5_3:+27987717 Msa0807170:CDS
GTGTGGATTTGATTGAAGAA+TGG 0.481552 5_3:+27986115 Msa0807170:CDS
AGGAATTCGAAAATGAAATT+GGG 0.482389 5_3:-27989548 Msa0807180:CDS
TAATCCATAATCAGATAACT+TGG 0.482467 5_3:+27989224 Msa0807170:three_prime_UTR
AAAGGAGCACCGCAGAGAAA+AGG 0.484488 5_3:+27989999 Msa0807170:three_prime_UTR
AAGCTTAGAATTTCAATGGC+AGG 0.484745 5_3:-27987264 None:intergenic
CAGCACAAGTAGAGGCAATA+GGG 0.485237 5_3:-27989385 Msa0807180:CDS
GATATCACTTGCTCTGCAAA+CGG 0.488800 5_3:-27989975 Msa0807180:CDS
AAAATCTCTTTCTCAGTAGC+TGG 0.489093 5_3:+27991487 Msa0807170:three_prime_UTR
TCACATATGGTGCTAACTGC+AGG 0.490346 5_3:+27987234 Msa0807170:CDS
CCAAGCTGAATAACACCATC+AGG 0.491931 5_3:-27985850 None:intergenic
GGTCTATGTGGAAGGAGATC+CGG 0.495215 5_3:-27988736 Msa0807180:three_prime_UTR
TTGATAGGAGGCGGATCGAT+TGG 0.497591 5_3:-27989654 Msa0807180:CDS
ATCTCTAATGAAATATTTGG+AGG 0.499661 5_3:+27987670 Msa0807170:CDS
AAATGATATTCCTGTAGTAA+TGG 0.500041 5_3:+27988218 Msa0807170:CDS
ATAGGTTTCCTAGGCTTGAA+GGG 0.500457 5_3:+27990195 Msa0807170:three_prime_UTR
TGTTAGAGGATTTAAGGTTG+AGG 0.502028 5_3:+27989271 Msa0807170:three_prime_UTR
TGTGGAAGGATTAGAGCAGT+TGG 0.502576 5_3:+27987996 Msa0807170:CDS
CTCTTCAACCCTGAGAGTGC+TGG 0.504058 5_3:+27991301 Msa0807170:three_prime_UTR
TGCAGTCCTAGGATGCTGAA+TGG 0.504782 5_3:+27990797 Msa0807170:three_prime_UTR
AACGAATAAAGACAATATTG+AGG 0.504860 5_3:+27988513 Msa0807170:three_prime_UTR
GTCTCGGACTAATCAAAGTT+GGG 0.505170 5_3:-27985428 None:intergenic
TGGAGTTGAATAAGCTGAAA+GGG 0.505327 5_3:-27990610 Msa0807180:CDS
GTCCTTTGGAACACTAGCTT+AGG 0.506168 5_3:-27991337 Msa0807180:CDS
TTGCAATTTGTTATGTCAGC+CGG 0.506519 5_3:+27990437 Msa0807170:three_prime_UTR
TTGAGTTCATGGGTTTCTGG+TGG 0.509741 5_3:-27991421 Msa0807180:CDS
GGAAGCATCCCTTCAAGCCT+AGG 0.509937 5_3:-27990203 Msa0807180:CDS
AATTTGCCAGCAGGGTTCGA+AGG 0.512224 5_3:-27987586 None:intergenic
TGTATATTGCTCAAGAGGAC+GGG 0.512616 5_3:+27988376 Msa0807170:three_prime_UTR
ATGTATAATGCATTTGTGGA+AGG 0.513384 5_3:+27987982 Msa0807170:CDS
GACTATGAGGCGTGGGAACA+AGG 0.514495 5_3:-27987314 None:intergenic
ATGCATTTCCATTATCTGCT+AGG 0.514780 5_3:-27987290 None:intergenic
CTCACCGTCTAAGTTATTAC+CGG 0.517112 5_3:+27990292 Msa0807170:three_prime_UTR
AGCTTAGAATTTCAATGGCA+GGG 0.517674 5_3:-27987263 None:intergenic
TTTGGAACACTAGCTTAGGT+GGG 0.518660 5_3:-27991333 Msa0807180:CDS
TGAACAATCTCAGCCATGCT+TGG 0.519126 5_3:+27988862 Msa0807170:three_prime_UTR
AAGCATGGCTGAGATTGTTC+AGG 0.520205 5_3:-27988860 Msa0807180:CDS
CTGAGAAGTTTAGTCTTCCC+AGG 0.520517 5_3:+27989930 Msa0807170:three_prime_UTR
ACCAAGTTCCACAATGCTGT+TGG 0.520538 5_3:-27989165 Msa0807180:CDS
AAAGGATTATTGGAAAATGC+AGG 0.521378 5_3:+27990017 Msa0807170:three_prime_UTR
GACAAGGCGGGGAGCTCCGG+AGG 0.521383 5_3:-27985685 None:intergenic
AGCTAAGATCAATGTTACTC+CGG 0.521490 5_3:+27988134 Msa0807170:CDS
AGTCTCGGACTAATCAAAGT+TGG 0.521748 5_3:-27985429 None:intergenic
TTGTTTGTTGTAGCTATGTG+TGG 0.521963 5_3:+27986098 Msa0807170:intron
TACATTCTTCAAGGTCTATG+TGG 0.523180 5_3:-27988748 Msa0807180:three_prime_UTR
AGATTCCGATCCATCTCTGA+TGG 0.523428 5_3:+27988828 Msa0807170:three_prime_UTR
TTGTATATTGCTCAAGAGGA+CGG 0.524294 5_3:+27988375 Msa0807170:three_prime_UTR
TGAGTTGGCAATGGTTTAGT+GGG 0.524528 5_3:+27985509 Msa0807170:five_prime_UTR
GGATCGGAGGGCGACAATCA+TGG 0.524742 5_3:+27989298 Msa0807170:three_prime_UTR
TCAAACCCTTCGAACCCTGC+TGG 0.524906 5_3:+27987580 Msa0807170:CDS
AGAGAGAGCGTGACAAGGCG+GGG 0.528076 5_3:-27985696 None:intergenic
TGCATGTAGTGAGAGATTAG+TGG 0.529824 5_3:-27990714 Msa0807180:CDS
GGATTATGAATCCGATGATA+GGG 0.531594 5_3:-27985829 None:intergenic
GACTGTTACCCAGGACTATG+AGG 0.532638 5_3:-27987327 None:intergenic
CTTCAGGGAATAATTTGGAT+GGG 0.533396 5_3:-27990682 Msa0807180:CDS
TTACCATGATTTCAGATACA+AGG 0.534016 5_3:+27987914 Msa0807170:CDS
CAAGCCTAGGAAACCTATCA+AGG 0.534130 5_3:-27990190 Msa0807180:CDS
TGCTTTGACAGGAATTTACA+AGG 0.534148 5_3:-27988958 Msa0807180:CDS
TCTCAGGGTTGAAGAGGTTG+AGG 0.534892 5_3:-27991294 Msa0807180:CDS
TGTTGGAAGGAGGAGATTGG+CGG 0.536046 5_3:-27985654 None:intergenic
AGAAGGTTCCAAATTGCACT+TGG 0.536947 5_3:-27989348 Msa0807180:CDS
TTCCCACGCCTCATAGTCCT+GGG 0.537875 5_3:+27987319 Msa0807170:CDS
TGTTGCTGCAGGGATGTCTC+CGG 0.538904 5_3:-27990311 Msa0807180:intron
CGGGGAGCTCCGGAGGCGGA+AGG 0.541493 5_3:-27985678 None:intergenic
TGGATATGTTGCACCAGAGT+TGG 0.541978 5_3:-27989145 Msa0807180:CDS
AATCTCTATGATAATCTACA+TGG 0.544172 5_3:-27989426 Msa0807180:CDS
AGGGCTAATTTGTACTTCAG+AGG 0.544934 5_3:-27988899 Msa0807180:CDS
GCTTCAGGGAATAATTTGGA+TGG 0.546159 5_3:-27990683 Msa0807180:CDS
CAGCCGGAATTTCGCCGATG+AGG 0.547492 5_3:+27990453 Msa0807170:three_prime_UTR
CTTTGAAGTCCATGAATCCA+TGG 0.548428 5_3:-27986218 None:intergenic
GCAGAGCAAGTGATATCTAA+AGG 0.548758 5_3:+27989981 Msa0807170:three_prime_UTR
ACACAATACCTTGAGTTCAT+GGG 0.550424 5_3:-27991431 Msa0807180:CDS
CATCCGTTCATATTTCGGGT+CGG 0.550467 5_3:+27985743 Msa0807170:CDS
GCAAATCACCAATGAAATCC+GGG 0.551775 5_3:+27991161 Msa0807170:three_prime_UTR
ATCCATCTCTGATGGACTCA+AGG 0.551818 5_3:+27988836 Msa0807170:three_prime_UTR
GTCCTTGAGTCCATCAGAGA+TGG 0.552671 5_3:-27988838 Msa0807180:CDS
CATCGGATTCATAATCCTGA+TGG 0.552817 5_3:+27985835 Msa0807170:CDS
GCTAAGATCAATGTTACTCC+GGG 0.552971 5_3:+27988135 Msa0807170:CDS
TCTCTCTCAGTTCGGGTCAG+AGG 0.553332 5_3:+27985712 Msa0807170:CDS
TGCGTGGTTACACTTTCCAC+AGG 0.555838 5_3:+27989042 Msa0807170:three_prime_UTR
CAGCACTCTCAGGGTTGAAG+AGG 0.555845 5_3:-27991300 Msa0807180:CDS
GAAAATGAAATTGGGCGACT+AGG 0.556960 5_3:-27989540 Msa0807180:CDS
ACTGACCTTGCTACTTACCA+TGG 0.557547 5_3:+27986201 Msa0807170:CDS
AAACTCAAGTGAGTTGGCAA+TGG 0.557612 5_3:+27985500 Msa0807170:five_prime_UTR
TGGAAGCGGAAGATCATGAT+CGG 0.557918 5_3:+27987737 Msa0807170:CDS
AAACGAAGAGTTTGTGAGCA+TGG 0.560825 5_3:+27987705 Msa0807170:CDS
TTTAAATCTCCAAGTGAAGG+AGG 0.561318 5_3:+27990122 Msa0807170:three_prime_UTR
AAACTCAAACTCAAGTGAGT+TGG 0.561403 5_3:+27985494 Msa0807170:five_prime_UTR
ATAACTCCTACATTAAAACT+TGG 0.562403 5_3:-27987805 None:intergenic
TGTTGTCACCAGCACTCTCA+GGG 0.562951 5_3:-27991309 Msa0807180:CDS
CGTAAAATGGCGATCTGGGG+TGG 0.563080 5_3:+27987441 Msa0807170:CDS
TTGTTCTAGATGATTGATTG+AGG 0.565964 5_3:-27991855 None:intergenic
TTCTTCAAGGTCTATGTGGA+AGG 0.565973 5_3:-27988744 Msa0807180:three_prime_UTR
TCAATGTTGCCAAACCCCTC+AGG 0.568023 5_3:+27990509 Msa0807170:three_prime_UTR
GGAAGCGGAAGATCATGATC+GGG 0.568398 5_3:+27987738 Msa0807170:CDS
GATCGCCATCTTCACCTCCT+GGG 0.568440 5_3:-27989947 Msa0807180:CDS
CAAAATCAACTGCATTGAAG+AGG 0.571450 5_3:+27989470 Msa0807170:three_prime_UTR
AAAATTATAGTGCCTTTGCA+AGG 0.571998 5_3:+27985541 Msa0807170:CDS
CTCCTATAATGAGAATGTTG+TGG 0.573694 5_3:+27987831 Msa0807170:CDS
AAGGAGTCGTTGATAGGAGG+CGG 0.574070 5_3:-27989663 Msa0807180:CDS
CATGGCAGAAATCATGGAAG+CGG 0.576068 5_3:+27987723 Msa0807170:CDS
GGCGGAAGGTTGTTGGAAGG+AGG 0.578316 5_3:-27985664 None:intergenic
TCCTTTAAGAAGACCAAGCA+TGG 0.578827 5_3:-27988875 Msa0807180:CDS
TTCAGGGAATAATTTGGATG+GGG 0.579653 5_3:-27990681 Msa0807180:CDS
ATTTGCCAGCAGGGTTCGAA+GGG 0.580365 5_3:-27987585 None:intergenic
TGAGTCCATCAGAGATGGAT+CGG 0.581222 5_3:-27988833 Msa0807180:CDS
ATGCTGATCTTCACTCATTG+TGG 0.581826 5_3:-27991222 Msa0807180:CDS
ATCAGTTCATGAATGTACTC+GGG 0.582279 5_3:-27988447 Msa0807180:three_prime_UTR
ACACTTGAAAGTTGAAACAA+TGG 0.583650 5_3:+27988601 Msa0807170:three_prime_UTR
AAATTAGGTAATAACTCGAT+AGG 0.584585 5_3:-27990542 Msa0807180:CDS
GCAGTTAGCACCATATGTGA+AGG 0.584986 5_3:-27987231 None:intergenic
TTGGAGTTGAATAAGCTGAA+AGG 0.588272 5_3:-27990611 Msa0807180:CDS
TTAAGGTTGAGGTGAAGGAT+CGG 0.589037 5_3:+27989282 Msa0807170:three_prime_UTR
TGCAGCTGTGATTCTAACTG+GGG 0.589108 5_3:-27989880 Msa0807180:CDS
TTAAATCTCCAAGTGAAGGA+GGG 0.590232 5_3:+27990123 Msa0807170:three_prime_UTR
TACTCTAACTCTGAGTTGCA+AGG 0.591171 5_3:+27988784 Msa0807170:three_prime_UTR
CACCAAAGCATTGCTTGACA+AGG 0.591824 5_3:-27989682 Msa0807180:CDS
CAATGCCTTATCAGGTAGTG+TGG 0.592760 5_3:-27990891 Msa0807180:CDS
TTATTTAAATCTCCAAGTGA+AGG 0.593482 5_3:+27990119 Msa0807170:three_prime_UTR
GACAAGGAGTCGTTGATAGG+AGG 0.593748 5_3:-27989666 Msa0807180:CDS
TCGGGCCCTAATACTCATGA+TGG 0.594444 5_3:+27989845 Msa0807170:three_prime_UTR
TTCGTTCCTATAGTGAAAAG+GGG 0.594801 5_3:+27988079 Msa0807170:CDS
GATTTAATAATTTGCCAGCA+GGG 0.595062 5_3:-27987594 None:intergenic
CAGAGTTGGCTCAAAGCTTG+AGG 0.595660 5_3:-27989131 Msa0807180:CDS
AGTGATACATAAGATAACAT+AGG 0.596660 5_3:+27990920 Msa0807170:three_prime_UTR
CGTTAAAGGTTACAAAGGAG+AGG 0.597571 5_3:-27988494 Msa0807180:three_prime_UTR
AGAAAGTAGAAAAGAGCGCA+AGG 0.597657 5_3:-27985607 None:intergenic
ATGGAAGCGCTGCTATACTA+GGG 0.597721 5_3:+27986148 Msa0807170:CDS
GTCACTGTATTGAACCAGGA+TGG 0.598491 5_3:+27988166 Msa0807170:CDS
ACACCTGTGTAACCTTGACA+TGG 0.598890 5_3:+27991394 Msa0807170:three_prime_UTR
ACCAGAAACCCATGAACTCA+AGG 0.599038 5_3:+27991423 Msa0807170:three_prime_UTR
CCTGGAACCAGCACAAGTAG+AGG 0.599978 5_3:-27989393 Msa0807180:CDS
AACTGAGAGAGAGCGTGACA+AGG 0.600133 5_3:-27985701 None:intergenic
GATCGAACCGGATAACGCAT+TGG 0.600218 5_3:+27991183 Msa0807170:three_prime_UTR
CCTTGGACAACTCCTTGCAA+AGG 0.600708 5_3:-27985553 None:intergenic
CAAAACACAACAGCGAACTC+AGG 0.600849 5_3:+27985334 Msa0807170:five_prime_UTR
GAGTGCACCAGAAGCAGTGG+TGG 0.601656 5_3:+27988024 Msa0807170:CDS
ATTGTTGAGAGTACACCTCT+AGG 0.602973 5_3:-27989792 Msa0807180:CDS
TTTCAGCTTATTCAACTCCA+AGG 0.604264 5_3:+27990613 Msa0807170:three_prime_UTR
CACCTAAGCTAGTGTTCCAA+AGG 0.604515 5_3:+27991335 Msa0807170:three_prime_UTR
AAGGAGTTGTCCAAGGAACA+GGG 0.604578 5_3:+27985560 Msa0807170:CDS
TCATAAAGACTAACAAGTTG+AGG 0.605108 5_3:+27987950 Msa0807170:CDS
ATCTCTATGATAATCTACAT+GGG 0.605429 5_3:-27989425 Msa0807180:CDS
CATGAACTCAAGGTATTGTG+TGG 0.605466 5_3:+27991433 Msa0807170:three_prime_UTR
CATGCATCATAACCAGCTCA+AGG 0.605703 5_3:-27990225 Msa0807180:CDS
ACCCGAAATATGAACGGATG+CGG 0.606050 5_3:-27985740 None:intergenic
GGGAAGGATCAGAAATCAAG+AGG 0.606236 5_3:-27989568 Msa0807180:CDS
ATTGAGTGCACCAGAAGCAG+TGG 0.606848 5_3:+27988021 Msa0807170:CDS
AACTTGATTGACTTTCAACA+TGG 0.607665 5_3:-27988405 Msa0807180:three_prime_UTR
CCTTTGCAAGGAGTTGTCCA+AGG 0.609185 5_3:+27985553 Msa0807170:CDS
TTGGAACACTAGCTTAGGTG+GGG 0.610768 5_3:-27991332 Msa0807180:CDS
TCGCAGATAATCCCTATCAT+CGG 0.610937 5_3:+27985818 Msa0807170:CDS
TGATGAATCTGACATCACTC+AGG 0.611942 5_3:+27988330 Msa0807170:three_prime_UTR
ATACAGTGACAAGAGGATCC+CGG 0.612424 5_3:-27988153 Msa0807180:three_prime_UTR
AGGTTGAGGTGAAGGATCGG+AGG 0.613263 5_3:+27989285 Msa0807170:three_prime_UTR
GAATGTCACATAGTCTAGAA+GGG 0.614085 5_3:+27990942 Msa0807170:three_prime_UTR
GAAGAAAGAAACAAGCAAAG+AGG 0.615118 5_3:+27988536 Msa0807170:three_prime_UTR
TTGCATCTAGTTATGCTAGA+GGG 0.616200 5_3:+27990653 Msa0807170:three_prime_UTR
TCTTGTCACTGTATTGAACC+AGG 0.618687 5_3:+27988162 Msa0807170:CDS
CAGTACCTAAACAAAGCTGA+AGG 0.620424 5_3:+27991088 Msa0807170:three_prime_UTR
GCAAAGAGGATTCAAATCGT+AGG 0.620636 5_3:+27988550 Msa0807170:three_prime_UTR
ATCAAAATATGAAGATTGGG+AGG 0.620789 5_3:-27989709 Msa0807180:CDS
TTATTCGTTAAAGGTTACAA+AGG 0.621756 5_3:-27988499 Msa0807180:three_prime_UTR
CAACATATCCAACAGCATTG+TGG 0.622216 5_3:+27989157 Msa0807170:three_prime_UTR
AATCACAGCTGCAGCAACAA+TGG 0.622253 5_3:+27989890 Msa0807170:three_prime_UTR
TGAATCCATGGTAAGTAGCA+AGG 0.622432 5_3:-27986206 None:intergenic
CAGTTAGCACCATATGTGAA+GGG 0.623911 5_3:-27987230 None:intergenic
TACCCAGGACTATGAGGCGT+GGG 0.625346 5_3:-27987321 None:intergenic
CTTGCATCTAGTTATGCTAG+AGG 0.626093 5_3:+27990652 Msa0807170:three_prime_UTR
TCTGGTGGAGACCCATGTCA+AGG 0.626122 5_3:-27991406 Msa0807180:CDS
ATAGGCGGAATGATTCCTGA+GGG 0.626629 5_3:-27990524 Msa0807180:CDS
ATGCATCATAACCAGCTCAA+GGG 0.627951 5_3:-27990224 Msa0807180:CDS
ACTGACTCTCCTTATCACGT+TGG 0.628337 5_3:+27985784 Msa0807170:CDS
GGTTGAGGTGAAGGATCGGA+GGG 0.629687 5_3:+27989286 Msa0807170:three_prime_UTR
GGAGGCGGAAGGTTGTTGGA+AGG 0.630218 5_3:-27985667 None:intergenic
CTAGGGACACCATCAAATTG+TGG 0.630370 5_3:+27986165 Msa0807170:CDS
GTCTCCGGTAATAACTTAGA+CGG 0.630423 5_3:-27990296 Msa0807180:CDS
CAAAACAACAACCTCATGCG+TGG 0.632866 5_3:+27989026 Msa0807170:three_prime_UTR
GACCCGACCCGAAATATGAA+CGG 0.635011 5_3:-27985746 None:intergenic
GAGCAATTCACCAAAGACAC+AGG 0.638233 5_3:+27991013 Msa0807170:three_prime_UTR
TTAGATATTATCGATAAACA+AGG 0.638946 5_3:-27985390 None:intergenic
ATCCGGATTGACATTAGGGG+GGG 0.640736 5_3:-27988719 Msa0807180:three_prime_UTR
CTGGTTATGATGCATGTCAA+GGG 0.641439 5_3:+27990232 Msa0807170:three_prime_UTR
ATCATGGTGGAGATAGGCAA+GGG 0.641638 5_3:+27989314 Msa0807170:three_prime_UTR
AGATCCGGATTGACATTAGG+GGG 0.643671 5_3:-27988721 Msa0807180:three_prime_UTR
TGGATTCATGGACTTCAAAG+TGG 0.643980 5_3:+27986221 Msa0807170:CDS
TTGAACAACCTAAACCTCAT+CGG 0.644895 5_3:-27990467 Msa0807180:CDS
CACCTGTGTAACCTTGACAT+GGG 0.644930 5_3:+27991395 Msa0807170:three_prime_UTR
GACCCATGTCAAGGTTACAC+AGG 0.645143 5_3:-27991397 Msa0807180:CDS
CCTATGGTGCAGCTTTGATG+AGG 0.645473 5_3:+27987417 Msa0807170:intron
TTCGAGACTACAAGTTGACG+TGG 0.646238 5_3:+27988258 Msa0807170:exon
TGGTTCAATACAGTGACAAG+AGG 0.646697 5_3:-27988160 Msa0807180:three_prime_UTR
AATCATGGTGGAGATAGGCA+AGG 0.647329 5_3:+27989313 Msa0807170:three_prime_UTR
GCTGGTTATGATGCATGTCA+AGG 0.650361 5_3:+27990231 Msa0807170:three_prime_UTR
GGCCGTAAAATGGCGATCTG+GGG 0.651142 5_3:+27987438 Msa0807170:CDS
AGAAGCTTGAGACTTTGGGA+AGG 0.651892 5_3:-27989584 Msa0807180:CDS
GTTGATATTCAAGAATTGCG+AGG 0.653279 5_3:-27990578 Msa0807180:CDS
GGAGTTGTCCAAGGAACAGG+GGG 0.653313 5_3:+27985562 Msa0807170:CDS
AGTTACAGGGAGGAAGCCTG+TGG 0.660245 5_3:-27989058 Msa0807180:CDS
TGAGAGAGAGCGTGACAAGG+CGG 0.660625 5_3:-27985698 None:intergenic
TTAGGTAATAACTCGATAGG+CGG 0.660846 5_3:-27990539 Msa0807180:CDS
GATAGGCGGAATGATTCCTG+AGG 0.672730 5_3:-27990525 Msa0807180:CDS
GAAGAATGGATTCGTCACAA+TGG 0.675346 5_3:+27986129 Msa0807170:CDS
TAGCAAGGTCAGTGATACTG+AGG 0.675550 5_3:-27986191 None:intergenic
TTAATGAGAATGCTACATGT+TGG 0.675664 5_3:-27991716 Msa0807180:five_prime_UTR
GATGATTCTGTTGATCCTAG+AGG 0.676351 5_3:+27989777 Msa0807170:three_prime_UTR
GCAATTCTTGAATATCAACT+GGG 0.681985 5_3:+27990582 Msa0807170:three_prime_UTR
AGGAGTTGTCCAAGGAACAG+GGG 0.684611 5_3:+27985561 Msa0807170:CDS
ATCAAAGAATGGCTTCAATG+GGG 0.685524 5_3:-27991116 Msa0807180:CDS
TCGTTCCTATAGTGAAAAGG+GGG 0.686058 5_3:+27988080 Msa0807170:CDS
GATCCGGATTGACATTAGGG+GGG 0.697057 5_3:-27988720 Msa0807180:three_prime_UTR
TCGGAGGGCGACAATCATGG+TGG 0.703518 5_3:+27989301 Msa0807170:three_prime_UTR
GAGATCCGGATTGACATTAG+GGG 0.721717 5_3:-27988722 Msa0807180:three_prime_UTR
GGAAAGTGTAACCACGCATG+AGG 0.722085 5_3:-27989037 Msa0807180:CDS
TAGGCGGAATGATTCCTGAG+GGG 0.740049 5_3:-27990523 Msa0807180:CDS
AGAAGTTTAGTCTTCCCAGG+AGG 0.750266 5_3:+27989933 Msa0807170:three_prime_UTR
GTTCAAAGGTAACATCACTG+AGG 0.780669 5_3:-27991458 Msa0807180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAACTAAAATAACT+AGG - chr5_3:27986705-27986724 None:intergenic 10.0%
!! CAAAATAAAAACAAAAATTA+TGG + chr5_3:27986789-27986808 Msa0807170:intron 10.0%
!! ATATATATTAGTGTTAAAGA+TGG - chr5_3:27986656-27986675 None:intergenic 15.0%
!! TAAAATGACATTGAAATAAT+GGG - chr5_3:27986732-27986751 None:intergenic 15.0%
!! ATAAAATGACATTGAAATAA+TGG - chr5_3:27986733-27986752 None:intergenic 15.0%
!!! CAAATATTAAACTGATTTTT+AGG + chr5_3:27986756-27986775 Msa0807170:intron 15.0%
!!! TGTTTTTATTTTGTTTAACA+TGG - chr5_3:27986782-27986801 None:intergenic 15.0%
!! ATAATCTCTAATGAAATATT+TGG + chr5_3:27987667-27987686 Msa0807170:CDS 15.0%
!! AATATACAAAACAAATAAAC+AGG - chr5_3:27988364-27988383 Msa0807180:three_prime_UTR 15.0%
!! ATTTCAATATATCCTATAAT+GGG - chr5_3:27990766-27990785 Msa0807180:CDS 15.0%
!! TATTTCAATATATCCTATAA+TGG - chr5_3:27990767-27990786 Msa0807180:CDS 15.0%
!! TTAGATATTATCGATAAACA+AGG - chr5_3:27985393-27985412 None:intergenic 20.0%
!!! ATATTTTTTTAGTTGAGTCT+CGG - chr5_3:27985447-27985466 None:intergenic 20.0%
!!! AGATGGTAATTTAGTTTTTT+AGG - chr5_3:27986639-27986658 None:intergenic 20.0%
!!! TTTTATGCATACTATTACTA+AGG + chr5_3:27986966-27986985 Msa0807170:intron 20.0%
!!! TAATGATAGTTTTAAACCTA+TGG + chr5_3:27987401-27987420 Msa0807170:intron 20.0%
!! AAAAATGTATAATGCATTTG+TGG + chr5_3:27987978-27987997 Msa0807170:CDS 20.0%
!! TCAATGTAGTAAAACAAAAA+CGG - chr5_3:27988194-27988213 Msa0807180:three_prime_UTR 20.0%
!!! ATTATTTCTGCAAATTTCAT+TGG + chr5_3:27988286-27988305 Msa0807170:three_prime_UTR 20.0%
!! ATATTGTCTTTATTCGTTAA+AGG - chr5_3:27988511-27988530 Msa0807180:three_prime_UTR 20.0%
!! ATTTGTAACATTGCAATAAA+AGG - chr5_3:27988639-27988658 Msa0807180:three_prime_UTR 20.0%
!! CTTAATAATTACATTCTTCA+AGG - chr5_3:27988760-27988779 Msa0807180:three_prime_UTR 20.0%
!! AAATGTTATAATTGGAAAGT+TGG - chr5_3:27989757-27989776 Msa0807180:CDS 20.0%
!! GAATCATCAAATGTTATAAT+TGG - chr5_3:27989765-27989784 Msa0807180:CDS 20.0%
!!! TAGTAATAGATTTACTGATT+TGG - chr5_3:27990825-27990844 Msa0807180:CDS 20.0%
!!! TTTTCTTTCAATAATCTTAG+TGG - chr5_3:27990974-27990993 Msa0807180:CDS 20.0%
!! TTTCTAGATTTATCAAAGAA+TGG - chr5_3:27991130-27991149 Msa0807180:CDS 20.0%
!! AAATCTAGAAAACGAATATT+AGG + chr5_3:27991139-27991158 Msa0807170:three_prime_UTR 20.0%
!!! TTTAAGGTTTTGTAAAATGT+CGG + chr5_3:27991659-27991678 Msa0807170:three_prime_UTR 20.0%
!! GTGTGTTAAAAAAAATGATT+TGG + chr5_3:27991895-27991914 Msa0807170:three_prime_UTR 20.0%
! CTAACTAACTCTTTATCAAT+TGG - chr5_3:27985365-27985384 None:intergenic 25.0%
! AGAAAAGGAATAATAACTCA+CGG - chr5_3:27985890-27985909 None:intergenic 25.0%
! AGATTGAATCAATTCTATCT+TGG + chr5_3:27986304-27986323 Msa0807170:intron 25.0%
! GAGAATTAAGATAGAAACAA+AGG - chr5_3:27987149-27987168 None:intergenic 25.0%
! TCTTAATTCTCTAATCATAC+AGG + chr5_3:27987158-27987177 Msa0807170:intron 25.0%
!! AGATAACTAAACAAGGATTT+TGG - chr5_3:27987365-27987384 None:intergenic 25.0%
! ATCTCTAATGAAATATTTGG+AGG + chr5_3:27987670-27987689 Msa0807170:CDS 25.0%
! AGTTCATATAGTGTTTGATT+TGG + chr5_3:27987765-27987784 Msa0807170:CDS 25.0%
!!! TATGTTCCAAGTTTTAATGT+AGG + chr5_3:27987799-27987818 Msa0807170:CDS 25.0%
! ATAACTCCTACATTAAAACT+TGG - chr5_3:27987808-27987827 None:intergenic 25.0%
! AAATGATATTCCTGTAGTAA+TGG + chr5_3:27988218-27988237 Msa0807170:CDS 25.0%
! TTATTCGTTAAAGGTTACAA+AGG - chr5_3:27988502-27988521 Msa0807180:three_prime_UTR 25.0%
! AACGAATAAAGACAATATTG+AGG + chr5_3:27988513-27988532 Msa0807170:three_prime_UTR 25.0%
! ACGAATAAAGACAATATTGA+GGG + chr5_3:27988514-27988533 Msa0807170:three_prime_UTR 25.0%
!! TGATTCAGGTTATGAAATTA+GGG - chr5_3:27988921-27988940 Msa0807180:CDS 25.0%
!! TTGATTCAGGTTATGAAATT+AGG - chr5_3:27988922-27988941 Msa0807180:CDS 25.0%
! TGAATATGTAAGAAGTTTGT+TGG - chr5_3:27989004-27989023 Msa0807180:CDS 25.0%
!!! CTACCTATTTTGGATAATTT+CGG - chr5_3:27989195-27989214 Msa0807180:CDS 25.0%
! AAGTTATCTGATTATGGATT+AGG - chr5_3:27989225-27989244 Msa0807180:CDS 25.0%
! TAATCCATAATCAGATAACT+TGG + chr5_3:27989224-27989243 Msa0807170:three_prime_UTR 25.0%
! ATCTCTATGATAATCTACAT+GGG - chr5_3:27989428-27989447 Msa0807180:CDS 25.0%
! AATCTCTATGATAATCTACA+TGG - chr5_3:27989429-27989448 Msa0807180:CDS 25.0%
! TGTAATTTAGTTGCATTTCA+AGG - chr5_3:27989507-27989526 Msa0807180:CDS 25.0%
! AGGAATTCGAAAATGAAATT+GGG - chr5_3:27989551-27989570 Msa0807180:CDS 25.0%
! ACCATCAAAATATGAAGATT+GGG - chr5_3:27989715-27989734 Msa0807180:CDS 25.0%
! TACCATCAAAATATGAAGAT+TGG - chr5_3:27989716-27989735 Msa0807180:CDS 25.0%
! TTATTTAAATCTCCAAGTGA+AGG + chr5_3:27990119-27990138 Msa0807170:three_prime_UTR 25.0%
!! CTATCACATAATTCATTTTC+TGG - chr5_3:27990155-27990174 Msa0807180:CDS 25.0%
! ATGAATTATGTGATAGATCT+AGG + chr5_3:27990159-27990178 Msa0807170:three_prime_UTR 25.0%
! ATATTTGATTCACATTACAG+AGG + chr5_3:27990349-27990368 Msa0807170:intron 25.0%
! AAATTAGGTAATAACTCGAT+AGG - chr5_3:27990545-27990564 Msa0807180:CDS 25.0%
! AGTGATACATAAGATAACAT+AGG + chr5_3:27990920-27990939 Msa0807170:three_prime_UTR 25.0%
! AAGAAAAATCAAAACCTTCA+AGG + chr5_3:27990987-27991006 Msa0807170:three_prime_UTR 25.0%
!!! TTTTTCAGTTACAACGTTTA+AGG + chr5_3:27991643-27991662 Msa0807170:three_prime_UTR 25.0%
!!! ATTGATGTTTTGTTTCTCAT+TGG - chr5_3:27991686-27991705 Msa0807180:five_prime_UTR 25.0%
! GTAGAAGAAGTAGATATAAT+GGG - chr5_3:27991836-27991855 None:intergenic 25.0%
!!! AAAAAATGATTTGGCTTTTG+TGG + chr5_3:27991904-27991923 Msa0807170:three_prime_UTR 25.0%
!!! AAAAATGATTTGGCTTTTGT+GGG + chr5_3:27991905-27991924 Msa0807170:three_prime_UTR 25.0%
AAAATTATAGTGCCTTTGCA+AGG + chr5_3:27985541-27985560 Msa0807170:CDS 30.0%
TTGTTTAAACCAACGTGATA+AGG - chr5_3:27985796-27985815 None:intergenic 30.0%
! ATAATAACTCACGGTGTTTT+GGG - chr5_3:27985881-27985900 None:intergenic 30.0%
! AATAATAACTCACGGTGTTT+TGG - chr5_3:27985882-27985901 None:intergenic 30.0%
TTAAATTACCATTAGTGTCG+AGG + chr5_3:27985992-27986011 Msa0807170:intron 30.0%
! AGTAACAAGTTGAATCAATC+AGG - chr5_3:27986282-27986301 None:intergenic 30.0%
!! TATGGAGCATTTTAGATTGA+AGG + chr5_3:27986383-27986402 Msa0807170:intron 30.0%
ATATTGGATCAAATAGTCCA+TGG - chr5_3:27986834-27986853 None:intergenic 30.0%
!! AAGCTTTAAGATCCTCATAT+TGG - chr5_3:27986850-27986869 None:intergenic 30.0%
GAAGAGTAGATAACTAAACA+AGG - chr5_3:27987372-27987391 None:intergenic 30.0%
! GATTTAATAATTTGCCAGCA+GGG - chr5_3:27987597-27987616 None:intergenic 30.0%
ATCCACAACATTCTCATTAT+AGG - chr5_3:27987836-27987855 None:intergenic 30.0%
!!! TGAGAATTGTGCCATTTTTT+TGG - chr5_3:27987863-27987882 None:intergenic 30.0%
TTACCATGATTTCAGATACA+AGG + chr5_3:27987914-27987933 Msa0807170:CDS 30.0%
! AAACCTTGTATCTGAAATCA+TGG - chr5_3:27987920-27987939 Msa0807180:three_prime_UTR 30.0%
TCATAAAGACTAACAAGTTG+AGG + chr5_3:27987950-27987969 Msa0807170:CDS 30.0%
ATGTATAATGCATTTGTGGA+AGG + chr5_3:27987982-27988001 Msa0807170:CDS 30.0%
ATTCGTTCCTATAGTGAAAA+GGG + chr5_3:27988078-27988097 Msa0807170:CDS 30.0%
! TGTTTTGTATATTGCTCAAG+AGG + chr5_3:27988371-27988390 Msa0807170:three_prime_UTR 30.0%
! AACTTGATTGACTTTCAACA+TGG - chr5_3:27988408-27988427 Msa0807180:three_prime_UTR 30.0%
!! TCAACTTTCAAGTGTTTTCA+GGG - chr5_3:27988596-27988615 Msa0807180:three_prime_UTR 30.0%
!! TTCAACTTTCAAGTGTTTTC+AGG - chr5_3:27988597-27988616 Msa0807180:three_prime_UTR 30.0%
ACACTTGAAAGTTGAAACAA+TGG + chr5_3:27988601-27988620 Msa0807170:three_prime_UTR 30.0%
! TGTTGAGAATGAATTGATTC+AGG - chr5_3:27988935-27988954 Msa0807180:CDS 30.0%
AAGTGTGATGTTTACAGTTT+CGG - chr5_3:27989102-27989121 Msa0807180:CDS 30.0%
AGACCGAAATTATCCAAAAT+AGG + chr5_3:27989189-27989208 Msa0807170:three_prime_UTR 30.0%
! TTCATCTAAGAGTATGTTAG+AGG + chr5_3:27989257-27989276 Msa0807170:three_prime_UTR 30.0%
AGAGTATGTTAGAGGATTTA+AGG + chr5_3:27989265-27989284 Msa0807170:three_prime_UTR 30.0%
! TTGTCAGAGTTTGTTTCAAA+TGG - chr5_3:27989453-27989472 Msa0807180:CDS 30.0%
! CAACTAAATTACAGTGTTGA+AGG + chr5_3:27989514-27989533 Msa0807170:three_prime_UTR 30.0%
GAGGAATTCGAAAATGAAAT+TGG - chr5_3:27989552-27989571 Msa0807180:CDS 30.0%
ATCAAAATATGAAGATTGGG+AGG - chr5_3:27989712-27989731 Msa0807180:CDS 30.0%
!! TCCCAATCTTCATATTTTGA+TGG + chr5_3:27989711-27989730 Msa0807170:three_prime_UTR 30.0%
!!! CATCGTCTTTTTTTCTACAT+CGG + chr5_3:27989826-27989845 Msa0807170:three_prime_UTR 30.0%
!!! ATCGTCTTTTTTTCTACATC+GGG + chr5_3:27989827-27989846 Msa0807170:three_prime_UTR 30.0%
AAAGGATTATTGGAAAATGC+AGG + chr5_3:27990017-27990036 Msa0807170:three_prime_UTR 30.0%
! ATTGCAACAATACAGCATTT+TGG - chr5_3:27990047-27990066 Msa0807180:CDS 30.0%
TATGTGATAGATCTAGGAAT+TGG + chr5_3:27990165-27990184 Msa0807170:three_prime_UTR 30.0%
! GGACTATTGGTTATCAAATT+AGG - chr5_3:27990560-27990579 Msa0807180:CDS 30.0%
GCAATTCTTGAATATCAACT+GGG + chr5_3:27990582-27990601 Msa0807170:three_prime_UTR 30.0%
!! ATATCCTATAATGGGTTTGA+AGG - chr5_3:27990758-27990777 Msa0807180:CDS 30.0%
! AGTCTAATGCATTTGGATTT+TGG - chr5_3:27990848-27990867 Msa0807180:CDS 30.0%
AATCCAAATGCATTAGACTA+TGG + chr5_3:27990849-27990868 Msa0807170:three_prime_UTR 30.0%
CTTTCTCATAACAATCTTGT+TGG - chr5_3:27991046-27991065 Msa0807180:CDS 30.0%
TATCAAAGAATGGCTTCAAT+GGG - chr5_3:27991120-27991139 Msa0807180:CDS 30.0%
TTATCAAAGAATGGCTTCAA+TGG - chr5_3:27991121-27991140 Msa0807180:CDS 30.0%
!! ATTGTTTGGGAATCGATTTT+CGG - chr5_3:27991266-27991285 Msa0807180:CDS 30.0%
TGAGGATATTGACATTGTTT+GGG - chr5_3:27991279-27991298 Msa0807180:CDS 30.0%
TTGAGGATATTGACATTGTT+TGG - chr5_3:27991280-27991299 Msa0807180:CDS 30.0%
TTGTAGAAAGAATTGTCCTT+TGG - chr5_3:27991354-27991373 Msa0807180:CDS 30.0%
! GAGATTTTACTTCAGTTCAA+AGG - chr5_3:27991475-27991494 Msa0807180:CDS 30.0%
!!! TTTGTTTTGGTCTATTGCAA+CGG - chr5_3:27991518-27991537 Msa0807180:CDS 30.0%
TTAATGAGAATGCTACATGT+TGG - chr5_3:27991719-27991738 Msa0807180:five_prime_UTR 30.0%
GGTAGAAGAAGTAGATATAA+TGG - chr5_3:27991837-27991856 None:intergenic 30.0%
! TTGTTCTAGATGATTGATTG+AGG - chr5_3:27991858-27991877 None:intergenic 30.0%
!!! AAAATGATTTGGCTTTTGTG+GGG + chr5_3:27991906-27991925 Msa0807170:three_prime_UTR 30.0%
TGTAAAGGGTAGCATAAAAA+TGG + chr5_3:27991930-27991949 Msa0807170:three_prime_UTR 30.0%
AAACTCAAACTCAAGTGAGT+TGG + chr5_3:27985494-27985513 Msa0807170:five_prime_UTR 35.0%
GGATTATGAATCCGATGATA+GGG - chr5_3:27985832-27985851 None:intergenic 35.0%
AGGATTATGAATCCGATGAT+AGG - chr5_3:27985833-27985852 None:intergenic 35.0%
! ATTCCTTTTCTCTTCTCTGT+AGG + chr5_3:27985899-27985918 Msa0807170:intron 35.0%
!! TTGTTTGTTGTAGCTATGTG+TGG + chr5_3:27986098-27986117 Msa0807170:intron 35.0%
GTGTGGATTTGATTGAAGAA+TGG + chr5_3:27986115-27986134 Msa0807170:CDS 35.0%
GAATCAATCAGGAAGAACAA+AGG - chr5_3:27986271-27986290 None:intergenic 35.0%
! TCTAAAATGCTCCATAGCTT+TGG - chr5_3:27986379-27986398 None:intergenic 35.0%
GTTCGATGTTTGATATGTAG+CGG + chr5_3:27986507-27986526 Msa0807170:intron 35.0%
!! GTAGCGGACAATACATATAT+AGG + chr5_3:27986523-27986542 Msa0807170:intron 35.0%
AATTATGGTCCATGATCTGT+TGG + chr5_3:27986804-27986823 Msa0807170:intron 35.0%
GGACTATTTGATCCAATATG+AGG + chr5_3:27986835-27986854 Msa0807170:intron 35.0%
ATTAACTCAAAAGCTGAGTG+TGG + chr5_3:27986994-27987013 Msa0807170:intron 35.0%
TTCTCTAATCATACAGGTTG+TGG + chr5_3:27987164-27987183 Msa0807170:intron 35.0%
! TGGTTTCATGTCTCAAGTTT+TGG + chr5_3:27987188-27987207 Msa0807170:CDS 35.0%
TTTCTTCAACCCTTCACATA+TGG + chr5_3:27987221-27987240 Msa0807170:CDS 35.0%
AGCTTAGAATTTCAATGGCA+GGG - chr5_3:27987266-27987285 None:intergenic 35.0%
AAGCTTAGAATTTCAATGGC+AGG - chr5_3:27987267-27987286 None:intergenic 35.0%
GCAGAAGCTTAGAATTTCAA+TGG - chr5_3:27987271-27987290 None:intergenic 35.0%
ATGCATTTCCATTATCTGCT+AGG - chr5_3:27987293-27987312 None:intergenic 35.0%
TATGAAATTGACTGTTACCC+AGG - chr5_3:27987339-27987358 None:intergenic 35.0%
TTAGTTATCTACTCTTCTGC+AGG + chr5_3:27987375-27987394 Msa0807170:intron 35.0%
AAACGTAGTCAAAAAGTTCG+TGG + chr5_3:27987547-27987566 Msa0807170:CDS 35.0%
! CGATTTAATAATTTGCCAGC+AGG - chr5_3:27987598-27987617 None:intergenic 35.0%
AGAAACACTACTTGATCTTC+TGG + chr5_3:27987618-27987637 Msa0807170:CDS 35.0%
CTCCTATAATGAGAATGTTG+TGG + chr5_3:27987831-27987850 Msa0807170:CDS 35.0%
!!! GAATTGTGCCATTTTTTTGG+AGG - chr5_3:27987860-27987879 None:intergenic 35.0%
GTAATAAGCAATTGCTGAGT+TGG - chr5_3:27987898-27987917 Msa0807180:three_prime_UTR 35.0%
CATTCGTTCCTATAGTGAAA+AGG + chr5_3:27988077-27988096 Msa0807170:CDS 35.0%
TTCGTTCCTATAGTGAAAAG+GGG + chr5_3:27988079-27988098 Msa0807170:CDS 35.0%
AGCTAAGATCAATGTTACTC+CGG + chr5_3:27988134-27988153 Msa0807170:CDS 35.0%
TTGTATATTGCTCAAGAGGA+CGG + chr5_3:27988375-27988394 Msa0807170:three_prime_UTR 35.0%
ATCAGTTCATGAATGTACTC+GGG - chr5_3:27988450-27988469 Msa0807180:three_prime_UTR 35.0%
CATCAGTTCATGAATGTACT+CGG - chr5_3:27988451-27988470 Msa0807180:three_prime_UTR 35.0%
GAAGAAAGAAACAAGCAAAG+AGG + chr5_3:27988536-27988555 Msa0807170:three_prime_UTR 35.0%
!! CAACTTTCAAGTGTTTTCAG+GGG - chr5_3:27988595-27988614 Msa0807180:three_prime_UTR 35.0%
TACATTCTTCAAGGTCTATG+TGG - chr5_3:27988751-27988770 Msa0807180:three_prime_UTR 35.0%
TTGCAAGGAAAAACTCTTAC+TGG + chr5_3:27988799-27988818 Msa0807170:three_prime_UTR 35.0%
TGCTTTGACAGGAATTTACA+AGG - chr5_3:27988961-27988980 Msa0807180:CDS 35.0%
!! GTAAGAAGTTTGTTGGAAAC+TGG - chr5_3:27988997-27989016 Msa0807180:CDS 35.0%
!!! TTCTTTTGGAGCTAGTTACA+GGG - chr5_3:27989074-27989093 Msa0807180:CDS 35.0%
!!! ATTCTTTTGGAGCTAGTTAC+AGG - chr5_3:27989075-27989094 Msa0807180:CDS 35.0%
! AGGAAAGTTGCTACCTATTT+TGG - chr5_3:27989205-27989224 Msa0807180:CDS 35.0%
GAAGCCAAGTTATCTGATTA+TGG - chr5_3:27989231-27989250 Msa0807180:CDS 35.0%
! TGTTAGAGGATTTAAGGTTG+AGG + chr5_3:27989271-27989290 Msa0807170:three_prime_UTR 35.0%
! GGGAATTATATTGGTCTAGA+AGG - chr5_3:27989368-27989387 Msa0807180:CDS 35.0%
GAGGCAATAGGGAATTATAT+TGG - chr5_3:27989377-27989396 Msa0807180:CDS 35.0%
TATGATAATCTACATGGGCT+TGG - chr5_3:27989423-27989442 Msa0807180:CDS 35.0%
CAAAATCAACTGCATTGAAG+AGG + chr5_3:27989470-27989489 Msa0807170:three_prime_UTR 35.0%
TTGCATTTCAAGGTTACTAC+TGG - chr5_3:27989497-27989516 Msa0807180:CDS 35.0%
!! GTCTACAAAACCGATTTTGA+AGG - chr5_3:27989630-27989649 Msa0807180:CDS 35.0%
! TCCAATAATCCTTTTCTCTG+CGG - chr5_3:27990011-27990030 Msa0807180:CDS 35.0%
TGCTGTATTGTTGCAATATC+AGG + chr5_3:27990050-27990069 Msa0807170:three_prime_UTR 35.0%
TTTAAATCTCCAAGTGAAGG+AGG + chr5_3:27990122-27990141 Msa0807170:three_prime_UTR 35.0%
TTAAATCTCCAAGTGAAGGA+GGG + chr5_3:27990123-27990142 Msa0807170:three_prime_UTR 35.0%
!! GTCATTTTGTAAACAGACTG+AGG + chr5_3:27990266-27990285 Msa0807170:three_prime_UTR 35.0%
!! TTGCAATTTGTTATGTCAGC+CGG + chr5_3:27990437-27990456 Msa0807170:three_prime_UTR 35.0%
TTGAACAACCTAAACCTCAT+CGG - chr5_3:27990470-27990489 Msa0807180:CDS 35.0%
TTAGGTAATAACTCGATAGG+CGG - chr5_3:27990542-27990561 Msa0807180:CDS 35.0%
GTTGATATTCAAGAATTGCG+AGG - chr5_3:27990581-27990600 Msa0807180:CDS 35.0%
CGCAATTCTTGAATATCAAC+TGG + chr5_3:27990581-27990600 Msa0807170:three_prime_UTR 35.0%
TGGAGTTGAATAAGCTGAAA+GGG - chr5_3:27990613-27990632 Msa0807180:CDS 35.0%
TTGGAGTTGAATAAGCTGAA+AGG - chr5_3:27990614-27990633 Msa0807180:CDS 35.0%
TTTCAGCTTATTCAACTCCA+AGG + chr5_3:27990613-27990632 Msa0807170:three_prime_UTR 35.0%
TTGCATCTAGTTATGCTAGA+GGG + chr5_3:27990653-27990672 Msa0807170:three_prime_UTR 35.0%
TTCAGGGAATAATTTGGATG+GGG - chr5_3:27990684-27990703 Msa0807180:CDS 35.0%
CTTCAGGGAATAATTTGGAT+GGG - chr5_3:27990685-27990704 Msa0807180:CDS 35.0%
TGATGCTTCAGGGAATAATT+TGG - chr5_3:27990690-27990709 Msa0807180:CDS 35.0%
TTGTCCTTCAAACCCATTAT+AGG + chr5_3:27990751-27990770 Msa0807170:three_prime_UTR 35.0%
! ATGTAAGATTTTGCAGTCCT+AGG + chr5_3:27990786-27990805 Msa0807170:three_prime_UTR 35.0%
ATGCCATAGTCTAATGCATT+TGG - chr5_3:27990855-27990874 Msa0807180:CDS 35.0%
GAATGTCACATAGTCTAGAA+GGG + chr5_3:27990942-27990961 Msa0807170:three_prime_UTR 35.0%
!! AGATACCTTCAGCTTTGTTT+AGG - chr5_3:27991096-27991115 Msa0807180:CDS 35.0%
ATCAAAGAATGGCTTCAATG+GGG - chr5_3:27991119-27991138 Msa0807180:CDS 35.0%
TGAAGATCAGCATAATCATC+TGG + chr5_3:27991232-27991251 Msa0807170:three_prime_UTR 35.0%
!! TTGTTTGGGAATCGATTTTC+GGG - chr5_3:27991265-27991284 Msa0807180:CDS 35.0%
! GGTGTTTTCTGTAACATAGA+AGG - chr5_3:27991379-27991398 Msa0807180:CDS 35.0%
ACACAATACCTTGAGTTCAT+GGG - chr5_3:27991434-27991453 Msa0807180:CDS 35.0%
AAAATCTCTTTCTCAGTAGC+TGG + chr5_3:27991487-27991506 Msa0807170:three_prime_UTR 35.0%
! GCTTCATTCTCTGTTTGTTT+TGG - chr5_3:27991531-27991550 Msa0807180:CDS 35.0%
CATGTAGCATTCTCATTAAG+AGG + chr5_3:27991720-27991739 Msa0807170:three_prime_UTR 35.0%
AATGGGTAGTAGTAGTAGTT+TGG - chr5_3:27991819-27991838 None:intergenic 35.0%
!!! TGTGTTTTGGGTGTTGAGAT+AGG - chr5_3:27985323-27985342 None:intergenic 40.0%
! TGAGTTCGCTGTTGTGTTTT+GGG - chr5_3:27985335-27985354 None:intergenic 40.0%
GTCTCGGACTAATCAAAGTT+GGG - chr5_3:27985431-27985450 None:intergenic 40.0%
AGTCTCGGACTAATCAAAGT+TGG - chr5_3:27985432-27985451 None:intergenic 40.0%
! AAACTCAAGTGAGTTGGCAA+TGG + chr5_3:27985500-27985519 Msa0807170:five_prime_UTR 40.0%
! TGAGTTGGCAATGGTTTAGT+GGG + chr5_3:27985509-27985528 Msa0807170:five_prime_UTR 40.0%
! AGAAAGTAGAAAAGAGCGCA+AGG - chr5_3:27985610-27985629 None:intergenic 40.0%
AACCGCATCCGTTCATATTT+CGG + chr5_3:27985738-27985757 Msa0807170:CDS 40.0%
TCGCAGATAATCCCTATCAT+CGG + chr5_3:27985818-27985837 Msa0807170:CDS 40.0%
CATCGGATTCATAATCCTGA+TGG + chr5_3:27985835-27985854 Msa0807170:CDS 40.0%
ATGCCTACAGAGAAGAGAAA+AGG - chr5_3:27985905-27985924 None:intergenic 40.0%
TACTAACACCTCGACACTAA+TGG - chr5_3:27986003-27986022 None:intergenic 40.0%
!! TTAGTATCGTGTTTGGTGTC+CGG + chr5_3:27986017-27986036 Msa0807170:intron 40.0%
CATAAAACACTGACACACAC+CGG - chr5_3:27986039-27986058 None:intergenic 40.0%
! GAAGAATGGATTCGTCACAA+TGG + chr5_3:27986129-27986148 Msa0807170:CDS 40.0%
TGAATCCATGGTAAGTAGCA+AGG - chr5_3:27986209-27986228 None:intergenic 40.0%
! TGCTACTTACCATGGATTCA+TGG + chr5_3:27986209-27986228 Msa0807170:CDS 40.0%
!! CTTTGAAGTCCATGAATCCA+TGG - chr5_3:27986221-27986240 None:intergenic 40.0%
TGGATTCATGGACTTCAAAG+TGG + chr5_3:27986221-27986240 Msa0807170:CDS 40.0%
ATTCATGGACTTCAAAGTGG+TGG + chr5_3:27986224-27986243 Msa0807170:intron 40.0%
TTCATGGACTTCAAAGTGGT+GGG + chr5_3:27986225-27986244 Msa0807170:intron 40.0%
! GAAGAACAAAGGCACAAGAT+AGG - chr5_3:27986260-27986279 None:intergenic 40.0%
GATTTATGAAGCACGGACAT+TGG - chr5_3:27986557-27986576 None:intergenic 40.0%
CATCGTGGATTTATGAAGCA+CGG - chr5_3:27986564-27986583 None:intergenic 40.0%
GTATTCTTCTCTCTTCATCG+TGG - chr5_3:27986579-27986598 None:intergenic 40.0%
AATGTGTGGTTGCACGAATA+TGG + chr5_3:27986899-27986918 Msa0807170:intron 40.0%
! GTGTGGTCATCTCATTTTCT+AGG + chr5_3:27987011-27987030 Msa0807170:intron 40.0%
! TGGTCATCTCATTTTCTAGG+AGG + chr5_3:27987014-27987033 Msa0807170:intron 40.0%
!! GGTCATCTCATTTTCTAGGA+GGG + chr5_3:27987015-27987034 Msa0807170:intron 40.0%
CATATGCCAGATAGATAGAG+AGG - chr5_3:27987076-27987095 None:intergenic 40.0%
AGCAACTTCAAGTGAATGCA+AGG - chr5_3:27987103-27987122 None:intergenic 40.0%
TGTGAAGGGTTGAAGAAAAC+TGG - chr5_3:27987219-27987238 None:intergenic 40.0%
CAGTTAGCACCATATGTGAA+GGG - chr5_3:27987233-27987252 None:intergenic 40.0%
TTTGACTACGTTTCTTCGCT+TGG - chr5_3:27987540-27987559 None:intergenic 40.0%
AAACGAAGAGTTTGTGAGCA+TGG + chr5_3:27987705-27987724 Msa0807170:CDS 40.0%
TGTGGATGCCTCCAAAAAAA+TGG + chr5_3:27987849-27987868 Msa0807170:CDS 40.0%
TCGTTCCTATAGTGAAAAGG+GGG + chr5_3:27988080-27988099 Msa0807170:CDS 40.0%
GCTAAGATCAATGTTACTCC+GGG + chr5_3:27988135-27988154 Msa0807170:CDS 40.0%
TGGTTCAATACAGTGACAAG+AGG - chr5_3:27988163-27988182 Msa0807180:three_prime_UTR 40.0%
TCTTGTCACTGTATTGAACC+AGG + chr5_3:27988162-27988181 Msa0807170:CDS 40.0%
AAACAAAAACGGAACCATCC+TGG - chr5_3:27988183-27988202 Msa0807180:three_prime_UTR 40.0%
! CCTGTAGTAATGGAACGAAT+CGG + chr5_3:27988228-27988247 Msa0807170:CDS 40.0%
! CTGTAGTAATGGAACGAATC+GGG + chr5_3:27988229-27988248 Msa0807170:CDS 40.0%
TGATGAATCTGACATCACTC+AGG + chr5_3:27988330-27988349 Msa0807170:three_prime_UTR 40.0%
TGTATATTGCTCAAGAGGAC+GGG + chr5_3:27988376-27988395 Msa0807170:three_prime_UTR 40.0%
CGTTAAAGGTTACAAAGGAG+AGG - chr5_3:27988497-27988516 Msa0807180:three_prime_UTR 40.0%
GCAAAGAGGATTCAAATCGT+AGG + chr5_3:27988550-27988569 Msa0807170:three_prime_UTR 40.0%
TTCTTCAAGGTCTATGTGGA+AGG - chr5_3:27988747-27988766 Msa0807180:three_prime_UTR 40.0%
TACTCTAACTCTGAGTTGCA+AGG + chr5_3:27988784-27988803 Msa0807170:three_prime_UTR 40.0%
! TCCTTTAAGAAGACCAAGCA+TGG - chr5_3:27988878-27988897 Msa0807180:CDS 40.0%
! AGGGCTAATTTGTACTTCAG+AGG - chr5_3:27988902-27988921 Msa0807180:CDS 40.0%
!!! CAGTTTCGGTGTCATTCTTT+TGG - chr5_3:27989088-27989107 Msa0807180:CDS 40.0%
CAACATATCCAACAGCATTG+TGG + chr5_3:27989157-27989176 Msa0807170:three_prime_UTR 40.0%
! AGGATTTAAGGTTGAGGTGA+AGG + chr5_3:27989277-27989296 Msa0807170:three_prime_UTR 40.0%
TTAAGGTTGAGGTGAAGGAT+CGG + chr5_3:27989282-27989301 Msa0807170:three_prime_UTR 40.0%
TTGCAGTTCCAAGTGCAATT+TGG + chr5_3:27989340-27989359 Msa0807170:three_prime_UTR 40.0%
AGAAGGTTCCAAATTGCACT+TGG - chr5_3:27989351-27989370 Msa0807180:CDS 40.0%
GAAAATGAAATTGGGCGACT+AGG - chr5_3:27989543-27989562 Msa0807180:CDS 40.0%
GTGAAGAAGCTTGAGACTTT+GGG - chr5_3:27989591-27989610 Msa0807180:CDS 40.0%
AGTGAAGAAGCTTGAGACTT+TGG - chr5_3:27989592-27989611 Msa0807180:CDS 40.0%
TGAGACGTCACCTTCAAAAT+CGG + chr5_3:27989617-27989636 Msa0807170:three_prime_UTR 40.0%
AAATATGAAGATTGGGAGGC+AGG - chr5_3:27989708-27989727 Msa0807180:CDS 40.0%
GATGATTCTGTTGATCCTAG+AGG + chr5_3:27989777-27989796 Msa0807170:three_prime_UTR 40.0%
! ATTGTTGAGAGTACACCTCT+AGG - chr5_3:27989795-27989814 Msa0807180:CDS 40.0%
GGTGACCATCATGAGTATTA+GGG - chr5_3:27989853-27989872 Msa0807180:CDS 40.0%
TGGTGACCATCATGAGTATT+AGG - chr5_3:27989854-27989873 Msa0807180:CDS 40.0%
! GATTCTAACTGGGGTTTGTT+TGG - chr5_3:27989874-27989893 Msa0807180:CDS 40.0%
GATATCACTTGCTCTGCAAA+CGG - chr5_3:27989978-27989997 Msa0807180:CDS 40.0%
GCAGAGCAAGTGATATCTAA+AGG + chr5_3:27989981-27990000 Msa0807170:three_prime_UTR 40.0%
ACCGCAGAGAAAAGGATTAT+TGG + chr5_3:27990007-27990026 Msa0807170:three_prime_UTR 40.0%
CTCTCATTCAACAATCTCTC+TGG - chr5_3:27990083-27990102 Msa0807180:CDS 40.0%
CTAGGAATTGGATCCTTGAT+AGG + chr5_3:27990177-27990196 Msa0807170:three_prime_UTR 40.0%
ATAGGTTTCCTAGGCTTGAA+GGG + chr5_3:27990195-27990214 Msa0807170:three_prime_UTR 40.0%
ATGCATCATAACCAGCTCAA+GGG - chr5_3:27990227-27990246 Msa0807180:CDS 40.0%
CTGGTTATGATGCATGTCAA+GGG + chr5_3:27990232-27990251 Msa0807170:three_prime_UTR 40.0%
CTCACCGTCTAAGTTATTAC+CGG + chr5_3:27990292-27990311 Msa0807170:three_prime_UTR 40.0%
GTCTCCGGTAATAACTTAGA+CGG - chr5_3:27990299-27990318 Msa0807180:CDS 40.0%
CATTGAACTGCTTGAATTGC+TGG - chr5_3:27990495-27990514 Msa0807180:CDS 40.0%
TCAAGAATTGCGAGGACTAT+TGG - chr5_3:27990573-27990592 Msa0807180:CDS 40.0%
GAACTTAAAGCTCTTGTCCT+TGG - chr5_3:27990633-27990652 Msa0807180:CDS 40.0%
CTTGCATCTAGTTATGCTAG+AGG + chr5_3:27990652-27990671 Msa0807170:three_prime_UTR 40.0%
GCTTCAGGGAATAATTTGGA+TGG - chr5_3:27990686-27990705 Msa0807180:CDS 40.0%
TAGTGGTCTTTGATGCTTCA+GGG - chr5_3:27990700-27990719 Msa0807180:CDS 40.0%
TTAGTGGTCTTTGATGCTTC+AGG - chr5_3:27990701-27990720 Msa0807180:CDS 40.0%
TGCATGTAGTGAGAGATTAG+TGG - chr5_3:27990717-27990736 Msa0807180:CDS 40.0%
TCACTACATGCAGTGATATC+AGG + chr5_3:27990725-27990744 Msa0807170:three_prime_UTR 40.0%
GGAATGTCACATAGTCTAGA+AGG + chr5_3:27990941-27990960 Msa0807170:three_prime_UTR 40.0%
GTGAATTGCTCTAACCTTGA+AGG - chr5_3:27991004-27991023 Msa0807180:CDS 40.0%
TGGTTCAATTCCTGTGTCTT+TGG - chr5_3:27991026-27991045 Msa0807180:CDS 40.0%
CAGTACCTAAACAAAGCTGA+AGG + chr5_3:27991088-27991107 Msa0807170:three_prime_UTR 40.0%
GGCAAATCACCAATGAAATC+CGG + chr5_3:27991160-27991179 Msa0807170:three_prime_UTR 40.0%
GCAAATCACCAATGAAATCC+GGG + chr5_3:27991161-27991180 Msa0807170:three_prime_UTR 40.0%
ATGCTGATCTTCACTCATTG+TGG - chr5_3:27991225-27991244 Msa0807180:CDS 40.0%
! TTTGGAACACTAGCTTAGGT+GGG - chr5_3:27991336-27991355 Msa0807180:CDS 40.0%
CACACAATACCTTGAGTTCA+TGG - chr5_3:27991435-27991454 Msa0807180:CDS 40.0%
!! CATGAACTCAAGGTATTGTG+TGG + chr5_3:27991433-27991452 Msa0807170:three_prime_UTR 40.0%
GTTCAAAGGTAACATCACTG+AGG - chr5_3:27991461-27991480 Msa0807180:CDS 40.0%
! CTGAGTTCGCTGTTGTGTTT+TGG - chr5_3:27985336-27985355 None:intergenic 45.0%
CAAAACACAACAGCGAACTC+AGG + chr5_3:27985334-27985353 Msa0807170:five_prime_UTR 45.0%
! GTGAGTTGGCAATGGTTTAG+TGG + chr5_3:27985508-27985527 Msa0807170:five_prime_UTR 45.0%
AAGGAGTTGTCCAAGGAACA+GGG + chr5_3:27985560-27985579 Msa0807170:CDS 45.0%
AAAAAAGTCCCCCTGTTCCT+TGG - chr5_3:27985573-27985592 None:intergenic 45.0%
!!! AAGGAACAGGGGGACTTTTT+TGG + chr5_3:27985572-27985591 Msa0807170:CDS 45.0%
!!! AGGAACAGGGGGACTTTTTT+GGG + chr5_3:27985573-27985592 Msa0807170:CDS 45.0%
ACCGCATCCGTTCATATTTC+GGG + chr5_3:27985739-27985758 Msa0807170:CDS 45.0%
ACCCGAAATATGAACGGATG+CGG - chr5_3:27985743-27985762 None:intergenic 45.0%
! CATCCGTTCATATTTCGGGT+CGG + chr5_3:27985743-27985762 Msa0807170:CDS 45.0%
! ATCCGTTCATATTTCGGGTC+GGG + chr5_3:27985744-27985763 Msa0807170:CDS 45.0%
AGGAGAGTCAGTTGCGATTA+TGG - chr5_3:27985776-27985795 None:intergenic 45.0%
! ACTGACTCTCCTTATCACGT+TGG + chr5_3:27985784-27985803 Msa0807170:CDS 45.0%
CCAAGCTGAATAACACCATC+AGG - chr5_3:27985853-27985872 None:intergenic 45.0%
!! CCTGATGGTGTTATTCAGCT+TGG + chr5_3:27985850-27985869 Msa0807170:CDS 45.0%
! CGAGGTGTTAGTATCGTGTT+TGG + chr5_3:27986010-27986029 Msa0807170:intron 45.0%
! CGGTGTGTGTCAGTGTTTTA+TGG + chr5_3:27986037-27986056 Msa0807170:intron 45.0%
!! AATGGAAGCGCTGCTATACT+AGG + chr5_3:27986147-27986166 Msa0807170:CDS 45.0%
!! ATGGAAGCGCTGCTATACTA+GGG + chr5_3:27986148-27986167 Msa0807170:CDS 45.0%
CTAGGGACACCATCAAATTG+TGG + chr5_3:27986165-27986184 Msa0807170:CDS 45.0%
CTGAGGCAACCACAATTTGA+TGG - chr5_3:27986177-27986196 None:intergenic 45.0%
TAGCAAGGTCAGTGATACTG+AGG - chr5_3:27986194-27986213 None:intergenic 45.0%
! ACTGACCTTGCTACTTACCA+TGG + chr5_3:27986201-27986220 Msa0807170:CDS 45.0%
ACTGCATGCATCCAAAGCTA+TGG + chr5_3:27986365-27986384 Msa0807170:intron 45.0%
CATGGTCTTCCAACAGATCA+TGG - chr5_3:27986816-27986835 None:intergenic 45.0%
CATGATCTGTTGGAAGACCA+TGG + chr5_3:27986814-27986833 Msa0807170:intron 45.0%
!! AGCTTGCTAGATAGATGTCG+CGG + chr5_3:27986865-27986884 Msa0807170:intron 45.0%
CTAATCATACAGGTTGTGGC+TGG + chr5_3:27987168-27987187 Msa0807170:intron 45.0%
GCAGTTAGCACCATATGTGA+AGG - chr5_3:27987234-27987253 None:intergenic 45.0%
! TCACATATGGTGCTAACTGC+AGG + chr5_3:27987234-27987253 Msa0807170:CDS 45.0%
AGCTTCTGCCTAGCAGATAA+TGG + chr5_3:27987282-27987301 Msa0807170:CDS 45.0%
GCTTTGATGAGGCCGTAAAA+TGG + chr5_3:27987428-27987447 Msa0807170:intron 45.0%
TCTTCGCTTGGTTGAAAGCT+TGG - chr5_3:27987528-27987547 None:intergenic 45.0%
TGTGAGCATGGCAGAAATCA+TGG + chr5_3:27987717-27987736 Msa0807170:CDS 45.0%
CATGGCAGAAATCATGGAAG+CGG + chr5_3:27987723-27987742 Msa0807170:CDS 45.0%
TGGAAGCGGAAGATCATGAT+CGG + chr5_3:27987737-27987756 Msa0807170:CDS 45.0%
TGTGGAAGGATTAGAGCAGT+TGG + chr5_3:27987996-27988015 Msa0807170:CDS 45.0%
GTGGAAGGATTAGAGCAGTT+GGG + chr5_3:27987997-27988016 Msa0807170:CDS 45.0%
! CAGTTCCCCCTTTTCACTAT+AGG - chr5_3:27988088-27988107 Msa0807180:three_prime_UTR 45.0%
CTATAGTGAAAAGGGGGAAC+TGG + chr5_3:27988086-27988105 Msa0807170:CDS 45.0%
ATACAGTGACAAGAGGATCC+CGG - chr5_3:27988156-27988175 Msa0807180:three_prime_UTR 45.0%
GTCACTGTATTGAACCAGGA+TGG + chr5_3:27988166-27988185 Msa0807170:CDS 45.0%
! CCGATTCGTTCCATTACTAC+AGG - chr5_3:27988231-27988250 Msa0807180:three_prime_UTR 45.0%
! TTCGAGACTACAAGTTGACG+TGG + chr5_3:27988258-27988277 Msa0807170:exon 45.0%
AGATCCGGATTGACATTAGG+GGG - chr5_3:27988724-27988743 Msa0807180:three_prime_UTR 45.0%
GAGATCCGGATTGACATTAG+GGG - chr5_3:27988725-27988744 Msa0807180:three_prime_UTR 45.0%
GGAGATCCGGATTGACATTA+GGG - chr5_3:27988726-27988745 Msa0807180:three_prime_UTR 45.0%
AGGAGATCCGGATTGACATT+AGG - chr5_3:27988727-27988746 Msa0807180:three_prime_UTR 45.0%
AGATTCCGATCCATCTCTGA+TGG + chr5_3:27988828-27988847 Msa0807170:three_prime_UTR 45.0%
TGAGTCCATCAGAGATGGAT+CGG - chr5_3:27988836-27988855 Msa0807180:CDS 45.0%
!! ATCCATCTCTGATGGACTCA+AGG + chr5_3:27988836-27988855 Msa0807170:three_prime_UTR 45.0%
AAGCATGGCTGAGATTGTTC+AGG - chr5_3:27988863-27988882 Msa0807180:CDS 45.0%
TGAACAATCTCAGCCATGCT+TGG + chr5_3:27988862-27988881 Msa0807170:three_prime_UTR 45.0%
! GCCATGCTTGGTCTTCTTAA+AGG + chr5_3:27988874-27988893 Msa0807170:three_prime_UTR 45.0%
CAGCTTCAAACTGCTTTGAC+AGG - chr5_3:27988972-27988991 Msa0807180:CDS 45.0%
CAAAACAACAACCTCATGCG+TGG + chr5_3:27989026-27989045 Msa0807170:three_prime_UTR 45.0%
!!! TTTTGGAGCTAGTTACAGGG+AGG - chr5_3:27989071-27989090 Msa0807180:CDS 45.0%
TGGATATGTTGCACCAGAGT+TGG - chr5_3:27989148-27989167 Msa0807180:CDS 45.0%
TCCAACAGCATTGTGGAACT+TGG + chr5_3:27989164-27989183 Msa0807170:three_prime_UTR 45.0%
ACCAAGTTCCACAATGCTGT+TGG - chr5_3:27989168-27989187 Msa0807180:CDS 45.0%
! AATCATGGTGGAGATAGGCA+AGG + chr5_3:27989313-27989332 Msa0807170:three_prime_UTR 45.0%
! ATCATGGTGGAGATAGGCAA+GGG + chr5_3:27989314-27989333 Msa0807170:three_prime_UTR 45.0%
CAGCACAAGTAGAGGCAATA+GGG - chr5_3:27989388-27989407 Msa0807180:CDS 45.0%
GGGAAGGATCAGAAATCAAG+AGG - chr5_3:27989571-27989590 Msa0807180:CDS 45.0%
! AGAAGCTTGAGACTTTGGGA+AGG - chr5_3:27989587-27989606 Msa0807180:CDS 45.0%
CTTGACAAGGAGTCGTTGAT+AGG - chr5_3:27989672-27989691 Msa0807180:CDS 45.0%
CTCCTTGTCAAGCAATGCTT+TGG + chr5_3:27989680-27989699 Msa0807170:three_prime_UTR 45.0%
!! CACCAAAGCATTGCTTGACA+AGG - chr5_3:27989685-27989704 Msa0807180:CDS 45.0%
TGCAGCTGTGATTCTAACTG+GGG - chr5_3:27989883-27989902 Msa0807180:CDS 45.0%
CTGCAGCTGTGATTCTAACT+GGG - chr5_3:27989884-27989903 Msa0807180:CDS 45.0%
AATCACAGCTGCAGCAACAA+TGG + chr5_3:27989890-27989909 Msa0807170:three_prime_UTR 45.0%
! CTGAGAAGTTTAGTCTTCCC+AGG + chr5_3:27989930-27989949 Msa0807170:three_prime_UTR 45.0%
! AGAAGTTTAGTCTTCCCAGG+AGG + chr5_3:27989933-27989952 Msa0807170:three_prime_UTR 45.0%
GGATCCTTGATAGGTTTCCT+AGG + chr5_3:27990186-27990205 Msa0807170:three_prime_UTR 45.0%
CAAGCCTAGGAAACCTATCA+AGG - chr5_3:27990193-27990212 Msa0807180:CDS 45.0%
GATAGGTTTCCTAGGCTTGA+AGG + chr5_3:27990194-27990213 Msa0807170:three_prime_UTR 45.0%
CATGCATCATAACCAGCTCA+AGG - chr5_3:27990228-27990247 Msa0807180:CDS 45.0%
GCTGGTTATGATGCATGTCA+AGG + chr5_3:27990231-27990250 Msa0807170:three_prime_UTR 45.0%
! CATTCTTTCGTGTTGCTGCA+GGG - chr5_3:27990324-27990343 Msa0807180:intron 45.0%
! TCATTCTTTCGTGTTGCTGC+AGG - chr5_3:27990325-27990344 Msa0807180:intron 45.0%
AAACCTCATCGGCGAAATTC+CGG - chr5_3:27990459-27990478 Msa0807180:CDS 45.0%
GAATTTCGCCGATGAGGTTT+AGG + chr5_3:27990459-27990478 Msa0807170:three_prime_UTR 45.0%
ATAGGCGGAATGATTCCTGA+GGG - chr5_3:27990527-27990546 Msa0807180:CDS 45.0%
CTCTTCCACACTACCTGATA+AGG + chr5_3:27990886-27990905 Msa0807170:three_prime_UTR 45.0%
CAATGCCTTATCAGGTAGTG+TGG - chr5_3:27990894-27990913 Msa0807180:CDS 45.0%
CTGAGAAGCAATGCCTTATC+AGG - chr5_3:27990902-27990921 Msa0807180:CDS 45.0%
GAGCAATTCACCAAAGACAC+AGG + chr5_3:27991013-27991032 Msa0807170:three_prime_UTR 45.0%
AATGAAATCCGGGATCGAAC+CGG + chr5_3:27991171-27991190 Msa0807170:three_prime_UTR 45.0%
TTCAGCTCCAATGCGTTATC+CGG - chr5_3:27991193-27991212 Msa0807180:CDS 45.0%
! TTGGAACACTAGCTTAGGTG+GGG - chr5_3:27991335-27991354 Msa0807180:CDS 45.0%
!! CTTTGGAACACTAGCTTAGG+TGG - chr5_3:27991337-27991356 Msa0807180:CDS 45.0%
CACCTAAGCTAGTGTTCCAA+AGG + chr5_3:27991335-27991354 Msa0807170:three_prime_UTR 45.0%
!! GTCCTTTGGAACACTAGCTT+AGG - chr5_3:27991340-27991359 Msa0807180:CDS 45.0%
ACACCTGTGTAACCTTGACA+TGG + chr5_3:27991394-27991413 Msa0807170:three_prime_UTR 45.0%
CACCTGTGTAACCTTGACAT+GGG + chr5_3:27991395-27991414 Msa0807170:three_prime_UTR 45.0%
! TTGAGTTCATGGGTTTCTGG+TGG - chr5_3:27991424-27991443 Msa0807180:CDS 45.0%
ACCAGAAACCCATGAACTCA+AGG + chr5_3:27991423-27991442 Msa0807170:three_prime_UTR 45.0%
ACCTTGAGTTCATGGGTTTC+TGG - chr5_3:27991427-27991446 Msa0807180:CDS 45.0%
! TGGCTTTTGTGGGGTTGTAA+AGG + chr5_3:27991915-27991934 Msa0807170:three_prime_UTR 45.0%
! GGCTTTTGTGGGGTTGTAAA+GGG + chr5_3:27991916-27991935 Msa0807170:three_prime_UTR 45.0%
!!! TAATTTTATTTATATATAGA+TGG + chr5_3:27987046-27987065 Msa0807170:intron 5.0%
!!! AATTTTATTTATATATAGAT+GGG + chr5_3:27987047-27987066 Msa0807170:intron 5.0%
!! AAATTCTATATAAAAAAAAA+TGG + chr5_3:27988655-27988674 Msa0807170:three_prime_UTR 5.0%
CCTTGGACAACTCCTTGCAA+AGG - chr5_3:27985556-27985575 None:intergenic 50.0%
CCTTTGCAAGGAGTTGTCCA+AGG + chr5_3:27985553-27985572 Msa0807170:CDS 50.0%
CAAGGAGTTGTCCAAGGAAC+AGG + chr5_3:27985559-27985578 Msa0807170:CDS 50.0%
AGGAGTTGTCCAAGGAACAG+GGG + chr5_3:27985561-27985580 Msa0807170:CDS 50.0%
!!! GGAACAGGGGGACTTTTTTG+GGG + chr5_3:27985574-27985593 Msa0807170:CDS 50.0%
TGTTGGAAGGAGGAGATTGG+CGG - chr5_3:27985657-27985676 None:intergenic 50.0%
GGTTGTTGGAAGGAGGAGAT+TGG - chr5_3:27985660-27985679 None:intergenic 50.0%
! AACTGAGAGAGAGCGTGACA+AGG - chr5_3:27985704-27985723 None:intergenic 50.0%
TGTCACGCTCTCTCTCAGTT+CGG + chr5_3:27985704-27985723 Msa0807170:CDS 50.0%
GACCCGACCCGAAATATGAA+CGG - chr5_3:27985749-27985768 None:intergenic 50.0%
TCTTCTCTGTAGGCATGTCC+CGG + chr5_3:27985909-27985928 Msa0807170:intron 50.0%
TCAGACACATGTCGAACACC+GGG - chr5_3:27985930-27985949 None:intergenic 50.0%
CTCAGACACATGTCGAACAC+CGG - chr5_3:27985931-27985950 None:intergenic 50.0%
CGGTCGTAGACTGTAATGTG+TGG + chr5_3:27986885-27986904 Msa0807170:intron 50.0%
GGGTGTCCTCTCTATCTATC+TGG + chr5_3:27987067-27987086 Msa0807170:intron 50.0%
GACTGTTACCCAGGACTATG+AGG - chr5_3:27987330-27987349 None:intergenic 50.0%
CCTCATCAAAGCTGCACCAT+AGG - chr5_3:27987420-27987439 None:intergenic 50.0%
! CCTATGGTGCAGCTTTGATG+AGG + chr5_3:27987417-27987436 Msa0807170:intron 50.0%
AGGCCGTAAAATGGCGATCT+GGG + chr5_3:27987437-27987456 Msa0807170:CDS 50.0%
!! CACCCCAGATCGCCATTTTA+CGG - chr5_3:27987443-27987462 None:intergenic 50.0%
ATTTGCCAGCAGGGTTCGAA+GGG - chr5_3:27987588-27987607 None:intergenic 50.0%
AATTTGCCAGCAGGGTTCGA+AGG - chr5_3:27987589-27987608 None:intergenic 50.0%
GGAAGCGGAAGATCATGATC+GGG + chr5_3:27987738-27987757 Msa0807170:CDS 50.0%
ATTGAGTGCACCAGAAGCAG+TGG + chr5_3:27988021-27988040 Msa0807170:CDS 50.0%
TTGCTCAAGAGGACGGGTAT+TGG + chr5_3:27988382-27988401 Msa0807170:three_prime_UTR 50.0%
TTCCCCCCCTAATGTCAATC+CGG + chr5_3:27988717-27988736 Msa0807170:three_prime_UTR 50.0%
ATCCGGATTGACATTAGGGG+GGG - chr5_3:27988722-27988741 Msa0807180:three_prime_UTR 50.0%
GATCCGGATTGACATTAGGG+GGG - chr5_3:27988723-27988742 Msa0807180:three_prime_UTR 50.0%
GGTCTATGTGGAAGGAGATC+CGG - chr5_3:27988739-27988758 Msa0807180:three_prime_UTR 50.0%
GTCCTTGAGTCCATCAGAGA+TGG - chr5_3:27988841-27988860 Msa0807180:CDS 50.0%
! GGAAAGTGTAACCACGCATG+AGG - chr5_3:27989040-27989059 Msa0807180:CDS 50.0%
TGCGTGGTTACACTTTCCAC+AGG + chr5_3:27989042-27989061 Msa0807170:three_prime_UTR 50.0%
! CAGAGTTGGCTCAAAGCTTG+AGG - chr5_3:27989134-27989153 Msa0807180:CDS 50.0%
!! CTCAAGCTTTGAGCCAACTC+TGG + chr5_3:27989132-27989151 Msa0807170:three_prime_UTR 50.0%
CCAGCACAAGTAGAGGCAAT+AGG - chr5_3:27989389-27989408 Msa0807180:CDS 50.0%
CCTATTGCCTCTACTTGTGC+TGG + chr5_3:27989386-27989405 Msa0807170:three_prime_UTR 50.0%
CTACATGGGCTTGGATATCC+TGG - chr5_3:27989414-27989433 Msa0807180:CDS 50.0%
TTGATAGGAGGCGGATCGAT+TGG - chr5_3:27989657-27989676 Msa0807180:CDS 50.0%
! AAGGAGTCGTTGATAGGAGG+CGG - chr5_3:27989666-27989685 Msa0807180:CDS 50.0%
! GACAAGGAGTCGTTGATAGG+AGG - chr5_3:27989669-27989688 Msa0807180:CDS 50.0%
TCGGGCCCTAATACTCATGA+TGG + chr5_3:27989845-27989864 Msa0807170:three_prime_UTR 50.0%
GCTGCAGCTGTGATTCTAAC+TGG - chr5_3:27989885-27989904 Msa0807180:CDS 50.0%
!! AAAGGAGCACCGCAGAGAAA+AGG + chr5_3:27989999-27990018 Msa0807170:three_prime_UTR 50.0%
GGTTCAATCCCTCCTTCACT+TGG - chr5_3:27990134-27990153 Msa0807180:CDS 50.0%
TCAATGTTGCCAAACCCCTC+AGG + chr5_3:27990509-27990528 Msa0807170:three_prime_UTR 50.0%
GGAATGATTCCTGAGGGGTT+TGG - chr5_3:27990521-27990540 Msa0807180:CDS 50.0%
TAGGCGGAATGATTCCTGAG+GGG - chr5_3:27990526-27990545 Msa0807180:CDS 50.0%
GATAGGCGGAATGATTCCTG+AGG - chr5_3:27990528-27990547 Msa0807180:CDS 50.0%
TGCAGTCCTAGGATGCTGAA+TGG + chr5_3:27990797-27990816 Msa0807170:three_prime_UTR 50.0%
TTGGCTCCATTCAGCATCCT+AGG - chr5_3:27990806-27990825 Msa0807180:CDS 50.0%
! AGTGTGGAAGAGCACGTTTC+TGG - chr5_3:27990878-27990897 Msa0807180:CDS 50.0%
GGTTCGATCCCGGATTTCAT+TGG - chr5_3:27991172-27991191 Msa0807180:CDS 50.0%
GATCGAACCGGATAACGCAT+TGG + chr5_3:27991183-27991202 Msa0807170:three_prime_UTR 50.0%
TCTCAGGGTTGAAGAGGTTG+AGG - chr5_3:27991297-27991316 Msa0807180:CDS 50.0%
TGTTGTCACCAGCACTCTCA+GGG - chr5_3:27991312-27991331 Msa0807180:CDS 50.0%
GACCCATGTCAAGGTTACAC+AGG - chr5_3:27991400-27991419 Msa0807180:CDS 50.0%
GGAGTTGTCCAAGGAACAGG+GGG + chr5_3:27985562-27985581 Msa0807170:CDS 55.0%
TTCCAACAACCTTCCGCCTC+CGG + chr5_3:27985669-27985688 Msa0807170:CDS 55.0%
! TGAGAGAGAGCGTGACAAGG+CGG - chr5_3:27985701-27985720 None:intergenic 55.0%
GTCACGCTCTCTCTCAGTTC+GGG + chr5_3:27985705-27985724 Msa0807170:CDS 55.0%
TCTCTCTCAGTTCGGGTCAG+AGG + chr5_3:27985712-27985731 Msa0807170:CDS 55.0%
GACTATGAGGCGTGGGAACA+AGG - chr5_3:27987317-27987336 None:intergenic 55.0%
TTCCCACGCCTCATAGTCCT+GGG + chr5_3:27987319-27987338 Msa0807170:CDS 55.0%
TACCCAGGACTATGAGGCGT+GGG - chr5_3:27987324-27987343 None:intergenic 55.0%
TTACCCAGGACTATGAGGCG+TGG - chr5_3:27987325-27987344 None:intergenic 55.0%
GAGGCCGTAAAATGGCGATC+TGG + chr5_3:27987436-27987455 Msa0807170:CDS 55.0%
GGCCGTAAAATGGCGATCTG+GGG + chr5_3:27987438-27987457 Msa0807170:CDS 55.0%
CGTAAAATGGCGATCTGGGG+TGG + chr5_3:27987441-27987460 Msa0807170:CDS 55.0%
TCAAACCCTTCGAACCCTGC+TGG + chr5_3:27987580-27987599 Msa0807170:CDS 55.0%
GCAAAAGCCACCACTGCTTC+TGG - chr5_3:27988034-27988053 Msa0807180:three_prime_UTR 55.0%
! CAGTGGTGGCTTTTGCTGCT+GGG + chr5_3:27988038-27988057 Msa0807170:CDS 55.0%
AAAAGGGGGAACTGGAGCTC+TGG + chr5_3:27988094-27988113 Msa0807170:CDS 55.0%
AAAGGGGGAACTGGAGCTCT+GGG + chr5_3:27988095-27988114 Msa0807170:CDS 55.0%
GGATTGACATTAGGGGGGGA+AGG - chr5_3:27988718-27988737 Msa0807180:three_prime_UTR 55.0%
AGTTACAGGGAGGAAGCCTG+TGG - chr5_3:27989061-27989080 Msa0807180:CDS 55.0%
AGGTTGAGGTGAAGGATCGG+AGG + chr5_3:27989285-27989304 Msa0807170:three_prime_UTR 55.0%
GGTTGAGGTGAAGGATCGGA+GGG + chr5_3:27989286-27989305 Msa0807170:three_prime_UTR 55.0%
CCTGGAACCAGCACAAGTAG+AGG - chr5_3:27989396-27989415 Msa0807180:CDS 55.0%
!! CCTCTACTTGTGCTGGTTCC+AGG + chr5_3:27989393-27989412 Msa0807170:three_prime_UTR 55.0%
GTCTTCCCAGGAGGTGAAGA+TGG + chr5_3:27989942-27989961 Msa0807170:three_prime_UTR 55.0%
GATCGCCATCTTCACCTCCT+GGG - chr5_3:27989950-27989969 Msa0807180:CDS 55.0%
AGATCGCCATCTTCACCTCC+TGG - chr5_3:27989951-27989970 Msa0807180:CDS 55.0%
!! GGAAGCATCCCTTCAAGCCT+AGG - chr5_3:27990206-27990225 Msa0807180:CDS 55.0%
AAGGGATGCTTCCCTTGAGC+TGG + chr5_3:27990213-27990232 Msa0807170:three_prime_UTR 55.0%
TGTTGCTGCAGGGATGTCTC+CGG - chr5_3:27990314-27990333 Msa0807180:intron 55.0%
! TGCGTTATCCGGTTCGATCC+CGG - chr5_3:27991182-27991201 Msa0807180:CDS 55.0%
CAGCACTCTCAGGGTTGAAG+AGG - chr5_3:27991303-27991322 Msa0807180:CDS 55.0%
! CTCTTCAACCCTGAGAGTGC+TGG + chr5_3:27991301-27991320 Msa0807170:three_prime_UTR 55.0%
GTGTTGTCACCAGCACTCTC+AGG - chr5_3:27991313-27991332 Msa0807180:CDS 55.0%
TCTGGTGGAGACCCATGTCA+AGG - chr5_3:27991409-27991428 Msa0807180:CDS 55.0%
GGCGGAAGGTTGTTGGAAGG+AGG - chr5_3:27985667-27985686 None:intergenic 60.0%
GGAGGCGGAAGGTTGTTGGA+AGG - chr5_3:27985670-27985689 None:intergenic 60.0%
! AGAGAGAGCGTGACAAGGCG+GGG - chr5_3:27985699-27985718 None:intergenic 60.0%
! GAGAGAGAGCGTGACAAGGC+GGG - chr5_3:27985700-27985719 None:intergenic 60.0%
GTTCCCACGCCTCATAGTCC+TGG + chr5_3:27987318-27987337 Msa0807170:CDS 60.0%
GAGTGCACCAGAAGCAGTGG+TGG + chr5_3:27988024-27988043 Msa0807170:CDS 60.0%
! GCAGTGGTGGCTTTTGCTGC+TGG + chr5_3:27988037-27988056 Msa0807170:CDS 60.0%
GACATTAGGGGGGGAAGGAG+AGG - chr5_3:27988713-27988732 Msa0807180:three_prime_UTR 60.0%
CAGCCGGAATTTCGCCGATG+AGG + chr5_3:27990453-27990472 Msa0807170:three_prime_UTR 60.0%
CTCCGGAGGCGGAAGGTTGT+TGG - chr5_3:27985674-27985693 None:intergenic 65.0%
CGTGACAAGGCGGGGAGCTC+CGG - chr5_3:27985691-27985710 None:intergenic 70.0%
AAGGCGGGGAGCTCCGGAGG+CGG - chr5_3:27985685-27985704 None:intergenic 75.0%
GACAAGGCGGGGAGCTCCGG+AGG - chr5_3:27985688-27985707 None:intergenic 75.0%
! CGGGGAGCTCCGGAGGCGGA+AGG - chr5_3:27985681-27985700 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 27985313 27991971 27985313 ID=Msa0807170;Name=Msa0807170
chr5_3 mRNA 27985313 27991971 27985313 ID=Msa0807170-mRNA-1;Parent=Msa0807170;Name=Msa0807170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=225|1|1|1|0.75|0.6|5|3597|496
chr5_3 exon 27985313 27985888 27985313 ID=Msa0807170-mRNA-1:exon:9969;Parent=Msa0807170-mRNA-1
chr5_3 exon 27986111 27986242 27986111 ID=Msa0807170-mRNA-1:exon:9970;Parent=Msa0807170-mRNA-1
chr5_3 exon 27987180 27987340 27987180 ID=Msa0807170-mRNA-1:exon:9971;Parent=Msa0807170-mRNA-1
chr5_3 exon 27987429 27990322 27987429 ID=Msa0807170-mRNA-1:exon:9972;Parent=Msa0807170-mRNA-1
chr5_3 exon 27990422 27991971 27990422 ID=Msa0807170-mRNA-1:exon:9973;Parent=Msa0807170-mRNA-1
chr5_3 five_prime_UTR 27985313 27985537 27985313 ID=Msa0807170-mRNA-1:five_prime_utr;Parent=Msa0807170-mRNA-1
chr5_3 CDS 27985538 27985888 27985538 ID=Msa0807170-mRNA-1:cds;Parent=Msa0807170-mRNA-1
chr5_3 CDS 27986111 27986242 27986111 ID=Msa0807170-mRNA-1:cds;Parent=Msa0807170-mRNA-1
chr5_3 CDS 27987180 27987340 27987180 ID=Msa0807170-mRNA-1:cds;Parent=Msa0807170-mRNA-1
chr5_3 CDS 27987429 27988275 27987429 ID=Msa0807170-mRNA-1:cds;Parent=Msa0807170-mRNA-1
chr5_3 three_prime_UTR 27988276 27990322 27988276 ID=Msa0807170-mRNA-1:three_prime_utr;Parent=Msa0807170-mRNA-1
chr5_3 three_prime_UTR 27990422 27991971 27990422 ID=Msa0807170-mRNA-1:three_prime_utr;Parent=Msa0807170-mRNA-1
Gene Sequence

>Msa0807170

ATGAAAATTATAGTGCCTTTGCAAGGAGTTGTCCAAGGAACAGGGGGACTTTTTTGGGGTTCAGTTATTCCTTGCGCTCTTTTCTACTTTCTTCAGCTTTATTTTAAGACACGTAACCGCCAATCTCCTCCTTCCAACAACCTTCCGCCTCCGGAGCTCCCCGCCTTGTCACGCTCTCTCTCAGTTCGGGTCAGAGGCTCAACCGCATCCGTTCATATTTCGGGTCGGGTCAATTCCATAATCGCAACTGACTCTCCTTATCACGTTGGTTTAAACAAAGTCGCAGATAATCCCTATCATCGGATTCATAATCCTGATGGTGTTATTCAGCTTGGTTTAGCCCAAAACACCCTATGTGTGGATTTGATTGAAGAATGGATTCGTCACAATGGAAGCGCTGCTATACTAGGGACACCATCAAATTGTGGTTGCCTCAGTATCACTGACCTTGCTACTTACCATGGATTCATGGACTTCAAAGTGGTTGTGGCTGGTTTCATGTCTCAAGTTTTGGAAAAACCAGTTTTCTTCAACCCTTCACATATGGTGCTAACTGCAGGTGCTATCCCTGCCATTGAAATTCTAAGCTTCTGCCTAGCAGATAATGGAAATGCATTCCTTGTTCCCACGCCTCATAGTCCTGGCTTTGATGAGGCCGTAAAATGGCGATCTGGGGTGGATATAGTATATGTTTCATGTCGCAGCGCTGATGACTTCAACATAAGCATAACTGCACTTGACCAAGCTTTCAACCAAGCGAAGAAACGTAGTCAAAAAGTTCGTGGAGTTATAATATCAAACCCTTCGAACCCTGCTGGCAAATTATTAAATCGAGAAACACTACTTGATCTTCTGGACTTCGCTAGAGAGAAGAACATTCATATAATCTCTAATGAAATATTTGGAGGCTCTGCTTATAGAAACGAAGAGTTTGTGAGCATGGCAGAAATCATGGAAGCGGAAGATCATGATCGGGACAGAGTTCATATAGTGTTTGATTTGGCAAATGAGCTATATGTTCCAAGTTTTAATGTAGGAGTTATCTACTCCTATAATGAGAATGTTGTGGATGCCTCCAAAAAAATGGCACAATTCTCAACTGTCTCTGCTCCAACTCAGCAATTGCTTATTACCATGATTTCAGATACAAGGTTTATTCAAGAACTCATAAAGACTAACAAGTTGAGGCTGCAAAAAATGTATAATGCATTTGTGGAAGGATTAGAGCAGTTGGGAATTGAGTGCACCAGAAGCAGTGGTGGCTTTTGCTGCTGGGCTGACATGAGTAGATTCATTCGTTCCTATAGTGAAAAGGGGGAACTGGAGCTCTGGGACAGATTGCTGAATGTAGCTAAGATCAATGTTACTCCGGGATCCTCTTGTCACTGTATTGAACCAGGATGGTTCCGTTTTTGTTTTACTACATTGACTGAAAATGATATTCCTGTAGTAATGGAACGAATCGGGAGAATTTTCGAGACTACAAGTTGA
Protein sequence

>Msa0807170

MKIIVPLQGVVQGTGGLFWGSVIPCALFYFLQLYFKTRNRQSPPSNNLPPPELPALSRSLSVRVRGSTASVHISGRVNSIIATDSPYHVGLNKVADNPYHRIHNPDGVIQLGLAQNTLCVDLIEEWIRHNGSAAILGTPSNCGCLSITDLATYHGFMDFKVVVAGFMSQVLEKPVFFNPSHMVLTAGAIPAIEILSFCLADNGNAFLVPTPHSPGFDEAVKWRSGVDIVYVSCRSADDFNISITALDQAFNQAKKRSQKVRGVIISNPSNPAGKLLNRETLLDLLDFAREKNIHIISNEIFGGSAYRNEEFVSMAEIMEAEDHDRDRVHIVFDLANELYVPSFNVGVIYSYNENVVDASKKMAQFSTVSAPTQQLLITMISDTRFIQELIKTNKLRLQKMYNAFVEGLEQLGIECTRSSGGFCCWADMSRFIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLTENDIPVVMERIGRIFETTS*