AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0427430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427430 MtrunA17_Chr3g0130391 98.378 185 3 0 1 185 200 384 8.43e-138 389
Msa0427430 MtrunA17_Chr1g0191201 69.832 179 54 0 1 179 187 365 1.27e-97 287
Msa0427430 MtrunA17_Chr3g0125421 67.222 180 58 1 1 179 169 348 1.31e-91 271
Msa0427430 MtrunA17_Chr8g0384481 67.568 185 56 3 1 182 189 372 4.16e-88 263
Msa0427430 MtrunA17_Chr1g0204181 64.804 179 63 0 1 179 193 371 5.99e-86 257
Msa0427430 MtrunA17_Chr6g0474391 66.480 179 60 0 1 179 198 376 3.01e-85 256
Msa0427430 MtrunA17_Chr8g0384461 61.749 183 69 1 1 182 178 360 1.05e-84 254
Msa0427430 MtrunA17_Chr8g0351101 62.011 179 68 0 1 179 187 365 8.67e-81 244
Msa0427430 MtrunA17_Chr4g0045471 43.210 162 89 2 1 159 167 328 4.48e-43 147
Msa0427430 MtrunA17_Chr4g0045441 42.236 161 91 1 1 159 167 327 5.12e-41 141
Msa0427430 MtrunA17_Chr4g0045451 42.236 161 91 1 1 159 167 327 6.97e-41 141
Msa0427430 MtrunA17_Chr4g0045431 42.236 161 91 1 1 159 167 327 6.85e-40 138
Msa0427430 MtrunA17_Chr3g0128001 42.500 160 91 1 1 159 159 318 1.32e-38 135
Msa0427430 MtrunA17_Chr1g0162351 39.326 178 104 2 1 174 212 389 2.83e-38 135
Msa0427430 MtrunA17_Chr8g0345831 39.333 150 91 0 10 159 175 324 4.91e-37 130
Msa0427430 MtrunA17_Chr1g0162321 38.764 178 105 2 1 174 212 389 9.53e-37 131
Msa0427430 MtrunA17_Chr2g0314401 41.060 151 88 1 1 150 176 326 1.80e-36 129
Msa0427430 MtrunA17_Chr8g0375681 41.096 146 85 1 1 145 107 252 7.59e-36 126
Msa0427430 MtrunA17_Chr5g0394071 39.665 179 90 3 1 175 12 176 2.45e-35 122
Msa0427430 MtrunA17_Chr7g0233661 44.286 140 68 1 34 173 19 148 1.29e-34 119
Msa0427430 MtrunA17_Chr2g0314391 39.073 151 91 1 1 150 195 345 1.88e-34 124
Msa0427430 MtrunA17_Chr4g0037611 44.615 130 71 1 1 129 1 130 4.68e-34 119
Msa0427430 MtrunA17_Chr5g0420981 36.025 161 102 1 1 160 177 337 1.88e-33 122
Msa0427430 MtrunA17_Chr2g0311861 36.158 177 110 2 3 176 169 345 2.08e-33 121
Msa0427430 MtrunA17_Chr4g0006371 42.763 152 83 3 8 155 196 347 2.81e-33 121
Msa0427430 MtrunA17_Chr5g0412681 36.196 163 100 2 2 160 152 314 3.08e-33 120
Msa0427430 MtrunA17_Chr2g0314381 39.073 151 91 1 1 150 202 352 5.22e-33 121
Msa0427430 MtrunA17_Chr1g0184161 37.079 178 107 2 1 176 163 337 8.12e-33 119
Msa0427430 MtrunA17_Chr8g0365241 35.404 161 103 1 1 160 181 341 9.69e-33 120
Msa0427430 MtrunA17_Chr8g0375601 39.041 146 88 1 1 145 174 319 1.54e-32 119
Msa0427430 MtrunA17_Chr7g0265221 37.572 173 96 1 2 162 192 364 1.67e-32 119
Msa0427430 MtrunA17_Chr1g0179801 38.554 166 96 1 2 161 191 356 2.21e-32 119
Msa0427430 MtrunA17_Chr8g0336781 37.725 167 101 1 1 164 220 386 2.45e-32 119
Msa0427430 MtrunA17_Chr4g0045411 38.750 160 96 1 1 158 166 325 2.70e-32 118
Msa0427430 MtrunA17_Chr7g0239111 35.632 174 106 2 8 175 185 358 4.09e-32 118
Msa0427430 MtrunA17_Chr2g0319491 41.085 129 76 0 8 136 161 289 4.12e-32 117
Msa0427430 MtrunA17_Chr4g0045461 38.994 159 95 1 3 159 168 326 6.49e-32 118
Msa0427430 MtrunA17_Chr7g0242551 38.816 152 89 2 8 155 188 339 7.01e-32 117
Msa0427430 MtrunA17_Chr3g0126761 43.750 144 80 1 30 173 85 227 1.93e-31 114
Msa0427430 MtrunA17_Chr7g0239821 40.769 130 76 1 34 162 220 349 4.08e-31 115
Msa0427430 MtrunA17_Chr5g0437181 37.748 151 91 2 8 155 183 333 4.26e-31 115
Msa0427430 MtrunA17_Chr2g0296371 36.905 168 100 3 1 166 177 340 5.17e-31 115
Msa0427430 MtrunA17_Chr8g0375671 38.194 144 88 1 1 143 179 322 5.33e-31 115
Msa0427430 MtrunA17_Chr4g0068891 37.805 164 94 4 1 156 136 299 5.38e-31 114
Msa0427430 MtrunA17_Chr5g0420951 39.583 144 86 1 1 143 177 320 5.68e-31 115
Msa0427430 MtrunA17_Chr5g0423191 38.194 144 88 1 1 143 170 313 7.72e-31 114
Msa0427430 MtrunA17_Chr2g0311711 40.000 165 92 2 1 161 190 351 8.03e-31 115
Msa0427430 MtrunA17_Chr5g0412651 35.583 163 102 2 8 167 174 336 1.07e-30 114
Msa0427430 MtrunA17_Chr1g0184111 34.463 177 114 2 1 176 162 337 1.27e-30 114
Msa0427430 MtrunA17_Chr8g0375701 38.889 144 87 1 1 143 177 320 1.44e-30 114
Msa0427430 MtrunA17_Chr1g0162361 42.029 138 77 2 17 151 175 312 2.01e-30 113
Msa0427430 MtrunA17_Chr3g0126741 42.657 143 81 1 27 169 211 352 2.49e-30 113
Msa0427430 MtrunA17_Chr2g0285931 34.615 182 105 6 1 171 145 323 2.78e-30 113
Msa0427430 MtrunA17_Chr1g0184121 33.333 177 116 2 1 176 162 337 3.39e-30 113
Msa0427430 MtrunA17_Chr3g0113641 39.103 156 92 2 3 155 179 334 3.45e-30 113
Msa0427430 MtrunA17_Chr2g0311691 37.888 161 93 1 8 161 193 353 7.51e-30 112
Msa0427430 MtrunA17_Chr8g0336861 35.088 171 105 2 1 168 185 352 8.81e-30 112
Msa0427430 MtrunA17_Chr7g0239101 33.908 174 109 2 8 175 185 358 9.73e-30 112
Msa0427430 MtrunA17_Chr3g0114861 44.715 123 68 0 34 156 197 319 1.19e-29 111
Msa0427430 MtrunA17_Chr2g0293931 36.416 173 99 6 1 162 17 189 1.24e-29 108
Msa0427430 MtrunA17_Chr8g0375571 34.437 151 98 1 1 150 172 322 1.65e-29 111
Msa0427430 MtrunA17_Chr5g0420941 38.194 144 88 1 1 143 168 311 2.02e-29 111
Msa0427430 MtrunA17_Chr1g0184101 35.625 160 102 1 1 160 163 321 2.70e-29 110
Msa0427430 MtrunA17_Chr5g0412671 34.591 159 103 1 8 165 174 332 2.87e-29 110
Msa0427430 MtrunA17_Chr5g0398291 36.306 157 96 2 4 156 179 335 3.22e-29 110
Msa0427430 MtrunA17_Chr8g0336761 36.025 161 100 1 4 161 187 347 3.94e-29 110
Msa0427430 MtrunA17_Chr2g0311701 37.888 161 90 2 8 161 199 356 4.78e-29 110
Msa0427430 MtrunA17_Chr5g0421041 38.194 144 88 1 1 143 168 311 5.90e-29 109
Msa0427430 MtrunA17_Chr6g0472861 39.241 158 92 2 1 154 192 349 6.53e-29 110
Msa0427430 MtrunA17_Chr2g0311681 36.025 161 96 1 8 161 193 353 7.03e-29 110
Msa0427430 MtrunA17_Chr1g0162191 37.063 143 89 1 2 143 173 315 7.78e-29 109
Msa0427430 MtrunA17_Chr5g0420721 36.806 144 90 1 1 143 72 215 8.19e-29 107
Msa0427430 MtrunA17_Chr8g0370711 37.870 169 101 4 3 167 179 347 8.48e-29 109
Msa0427430 MtrunA17_Chr2g0332191 35.000 180 110 2 1 173 169 348 9.65e-29 109
Msa0427430 MtrunA17_Chr2g0311831 34.078 179 115 1 1 176 191 369 2.08e-28 108
Msa0427430 MtrunA17_Chr5g0423221 40.000 145 85 2 1 143 194 338 2.38e-28 108
Msa0427430 MtrunA17_Chr2g0311741 35.542 166 103 2 8 172 157 319 2.80e-28 107
Msa0427430 MtrunA17_Chr3g0145171 36.806 144 89 2 1 142 177 320 2.86e-28 108
Msa0427430 MtrunA17_Chr8g0336851 36.000 150 93 1 4 150 187 336 3.26e-28 108
Msa0427430 MtrunA17_Chr1g0184151 35.220 159 97 2 1 154 163 320 3.51e-28 107
Msa0427430 MtrunA17_Chr5g0421101 38.194 144 88 1 1 143 170 313 4.38e-28 107
Msa0427430 MtrunA17_Chr3g0125201 33.939 165 100 3 1 156 120 284 4.41e-28 106
Msa0427430 MtrunA17_Chr5g0420901 36.111 144 91 1 1 143 169 312 4.69e-28 107
Msa0427430 MtrunA17_Chr3g0093761 41.429 140 78 2 30 165 203 342 6.74e-28 107
Msa0427430 MtrunA17_Chr3g0093741 40.411 146 83 2 24 165 198 343 6.91e-28 107
Msa0427430 MtrunA17_Chr1g0184241 39.189 148 90 0 3 150 192 339 7.46e-28 107
Msa0427430 MtrunA17_Chr7g0220001 31.677 161 108 2 1 160 163 322 8.66e-28 106
Msa0427430 MtrunA17_Chr3g0145181 44.262 122 65 2 28 148 205 324 1.12e-27 106
Msa0427430 MtrunA17_Chr5g0421091 41.406 128 73 2 1 126 168 295 1.26e-27 106
Msa0427430 MtrunA17_Chr7g0225881 44.068 118 66 0 4 121 190 307 1.28e-27 106
Msa0427430 MtrunA17_Chr6g0455481 34.731 167 104 3 1 166 165 327 1.41e-27 105
Msa0427430 MtrunA17_Chr5g0423201 36.806 144 90 1 1 143 171 314 1.43e-27 106
Msa0427430 MtrunA17_Chr2g0311631 35.897 156 93 1 7 155 183 338 1.52e-27 106
Msa0427430 MtrunA17_Chr5g0423251 36.111 144 91 1 1 143 170 313 1.85e-27 105
Msa0427430 MtrunA17_Chr7g0239091 38.211 123 75 1 35 156 307 429 2.11e-27 107
Msa0427430 MtrunA17_Chr1g0187821 38.217 157 94 2 1 154 190 346 2.37e-27 105
Msa0427430 MtrunA17_Chr8g0371931 39.706 136 80 1 4 137 168 303 2.78e-27 105
Msa0427430 MtrunA17_Chr7g0247741 34.483 174 107 4 1 168 130 302 2.88e-27 104
Msa0427430 MtrunA17_Chr8g0358941 30.899 178 108 5 1 166 144 318 3.52e-27 104
Msa0427430 MtrunA17_Chr5g0424201 34.503 171 103 3 1 163 167 336 3.73e-27 104
Msa0427430 MtrunA17_Chr7g0239071 36.986 146 86 2 35 174 157 302 4.54e-27 104
Msa0427430 MtrunA17_Chr8g0348081 35.294 153 96 1 1 150 184 336 5.48e-27 104
Msa0427430 MtrunA17_Chr8g0371921 40.441 136 79 1 4 137 168 303 5.67e-27 104
Msa0427430 MtrunA17_Chr1g0194321 32.948 173 99 4 1 156 139 311 8.81e-27 103
Msa0427430 MtrunA17_Chr8g0336801 37.984 129 77 1 36 161 11 139 1.20e-26 99.4
Msa0427430 MtrunA17_Chr5g0426891 34.641 153 99 1 12 163 175 327 1.35e-26 103
Msa0427430 MtrunA17_Chr3g0145201 45.690 116 60 2 34 148 846 959 1.65e-26 105
Msa0427430 MtrunA17_Chr3g0109041 36.364 154 94 1 1 150 171 324 1.67e-26 103
Msa0427430 MtrunA17_Chr7g0239121 31.868 182 117 3 1 175 174 355 1.83e-26 103
Msa0427430 MtrunA17_Chr1g0187811 36.478 159 96 2 1 154 311 469 1.87e-26 104
Msa0427430 MtrunA17_Chr1g0170631 32.402 179 115 3 1 177 13 187 2.13e-26 99.8
Msa0427430 MtrunA17_Chr3g0087031 32.919 161 107 1 1 160 183 343 2.47e-26 102
Msa0427430 MtrunA17_Chr8g0354261 34.337 166 97 3 1 158 193 354 2.85e-26 103
Msa0427430 MtrunA17_Chr2g0289341 31.875 160 104 4 1 155 121 280 3.32e-26 102
Msa0427430 MtrunA17_Chr8g0354241 33.951 162 103 1 1 158 193 354 3.35e-26 102
Msa0427430 MtrunA17_Chr8g0336631 35.065 154 97 1 4 154 188 341 3.37e-26 102
Msa0427430 MtrunA17_Chr1g0161111 40.994 161 85 5 25 178 273 430 5.76e-26 102
Msa0427430 MtrunA17_Chr5g0421011 36.111 144 91 1 1 143 170 313 6.06e-26 101
Msa0427430 MtrunA17_Chr2g0311761 33.889 180 115 2 1 176 191 370 6.25e-26 102
Msa0427430 MtrunA17_Chr7g0220011 35.915 142 89 2 1 141 161 301 6.27e-26 101
Msa0427430 MtrunA17_Chr1g0161081 40.000 150 83 4 33 178 225 371 6.32e-26 102
Msa0427430 MtrunA17_Chr8g0336751 34.969 163 103 1 3 162 219 381 7.66e-26 102
Msa0427430 MtrunA17_Chr4g0064781 41.026 117 68 1 35 150 206 322 7.71e-26 101
Msa0427430 MtrunA17_Chr1g0187831 31.667 180 119 2 1 176 193 372 9.20e-26 102
Msa0427430 MtrunA17_Chr8g0370721 43.443 122 66 2 28 148 205 324 9.76e-26 101
Msa0427430 MtrunA17_Chr7g0235951 33.333 183 114 4 1 176 190 371 1.10e-25 101
Msa0427430 MtrunA17_Chr2g0311921 32.222 180 118 2 1 176 177 356 1.25e-25 100
Msa0427430 MtrunA17_Chr7g0250511 36.774 155 96 2 8 161 181 334 1.71e-25 100
Msa0427430 MtrunA17_Chr5g0405411 36.765 136 84 1 4 137 168 303 1.77e-25 100
Msa0427430 MtrunA17_Chr8g0348951 32.759 174 111 3 1 168 129 302 1.86e-25 100
Msa0427430 MtrunA17_Chr3g0093751 39.286 140 81 2 30 165 204 343 2.36e-25 100
Msa0427430 MtrunA17_Chr7g0235981 33.520 179 113 1 4 176 147 325 2.83e-25 99.8
Msa0427430 MtrunA17_Chr4g0066121 30.939 181 122 1 1 178 185 365 3.23e-25 100
Msa0427430 MtrunA17_Chr1g0167931 36.145 166 102 2 3 164 140 305 3.65e-25 99.4
Msa0427430 MtrunA17_Chr5g0423211 35.971 139 88 1 1 138 173 311 3.91e-25 99.8
Msa0427430 MtrunA17_Chr5g0424211 33.813 139 90 1 1 137 167 305 5.63e-25 99.0
Msa0427430 MtrunA17_Chr7g0265351 39.394 132 76 2 38 165 195 326 1.97e-24 97.4
Msa0427430 MtrunA17_Chr5g0420881 39.815 108 64 1 37 143 2 109 2.91e-24 92.8
Msa0427430 MtrunA17_Chr2g0313111 30.168 179 113 6 1 171 141 315 3.98e-24 96.7
Msa0427430 MtrunA17_Chr2g0319521 44.330 97 54 0 1 97 26 122 6.32e-24 91.7
Msa0427430 MtrunA17_Chr7g0266651 34.783 161 101 2 4 160 184 344 7.67e-24 96.3
Msa0427430 MtrunA17_Chr3g0102041 38.235 136 82 1 4 137 168 303 1.03e-23 95.9
Msa0427430 MtrunA17_Chr1g0167911 33.129 163 106 1 1 160 176 338 1.21e-23 95.5
Msa0427430 MtrunA17_Chr8g0336871 34.000 150 90 2 4 150 3 146 3.08e-23 90.9
Msa0427430 MtrunA17_Chr1g0161041 38.926 149 84 3 34 178 249 394 5.28e-23 94.4
Msa0427430 MtrunA17_Chr4g0075471 30.921 152 101 3 13 161 7 157 5.58e-23 89.7
Msa0427430 MtrunA17_Chr1g0148771 35.252 139 88 2 1 137 180 318 9.47e-23 93.2
Msa0427430 MtrunA17_Chr1g0167961 36.145 166 102 2 3 164 194 359 1.21e-22 93.2
Msa0427430 MtrunA17_Chr4g0052251 30.939 181 112 6 1 171 146 323 1.90e-22 92.0
Msa0427430 MtrunA17_Chr2g0314371 45.833 96 51 1 1 95 199 294 2.27e-22 92.0
Msa0427430 MtrunA17_Chr3g0105281 32.164 171 98 5 4 173 159 312 5.92e-22 90.9
Msa0427430 MtrunA17_Chr5g0439011 31.429 175 109 5 1 168 122 292 7.92e-22 90.1
Msa0427430 MtrunA17_Chr7g0236011 37.725 167 98 2 1 161 190 356 8.06e-22 90.9
Msa0427430 MtrunA17_Chr8g0364471 33.136 169 103 2 4 166 193 357 8.56e-22 90.9
Msa0427430 MtrunA17_Chr4g0050031 33.577 137 89 1 8 142 193 329 1.46e-21 90.1
Msa0427430 MtrunA17_Chr3g0121141 28.421 190 128 6 1 185 121 307 1.49e-21 89.4
Msa0427430 MtrunA17_Chr4g0064771 38.462 117 71 1 35 150 71 187 3.06e-21 86.7
Msa0427430 MtrunA17_Chr4g0055591 33.939 165 102 3 1 159 179 342 4.93e-21 88.6
Msa0427430 MtrunA17_Chr7g0232161 37.500 120 74 1 1 119 183 302 8.00e-21 87.4
Msa0427430 MtrunA17_Chr4g0004071 28.125 160 113 2 3 161 137 295 2.17e-20 86.3
Msa0427430 MtrunA17_Chr1g0167951 30.508 177 120 1 3 176 177 353 3.96e-20 86.3
Msa0427430 MtrunA17_Chr3g0092581 30.952 168 111 3 1 165 1 166 4.34e-20 83.2
Msa0427430 MtrunA17_Chr3g0138351 30.220 182 116 6 2 176 137 314 4.55e-20 85.5
Msa0427430 MtrunA17_Chr8g0362741 43.750 96 52 2 1 95 175 269 5.79e-20 84.7
Msa0427430 MtrunA17_Chr4g0004061 32.192 146 96 3 1 144 135 279 6.89e-20 85.1
Msa0427430 MtrunA17_Chr4g0011311 42.718 103 56 3 4 104 193 294 7.89e-20 84.7
Msa0427430 MtrunA17_Chr1g0158011 29.560 159 108 3 1 155 80 238 1.15e-18 80.9
Msa0427430 MtrunA17_Chr7g0247991 36.250 160 96 2 1 154 190 349 1.87e-18 81.6
Msa0427430 MtrunA17_Chr8g0335411 35.625 160 97 1 1 154 190 349 3.53e-18 80.9
Msa0427430 MtrunA17_Chr8g0364171 40.385 104 57 3 4 104 31 132 4.54e-18 76.6
Msa0427430 MtrunA17_Chr6g0488511 28.571 147 98 3 3 142 121 267 1.00e-17 79.0
Msa0427430 MtrunA17_Chr7g0256741 27.976 168 116 4 1 165 136 301 1.48e-17 78.6
Msa0427430 MtrunA17_Chr3g0092531 30.909 165 111 3 3 165 131 294 2.20e-17 78.2
Msa0427430 MtrunA17_Chr4g0066991 34.483 174 104 2 1 168 170 339 2.27e-17 78.6
Msa0427430 MtrunA17_Chr4g0009541 25.731 171 118 4 1 167 134 299 5.80e-16 74.3
Msa0427430 MtrunA17_Chr8g0375581 38.824 85 51 1 12 95 1 85 7.17e-16 69.3
Msa0427430 MtrunA17_Chr6g0486831 32.911 158 96 4 3 151 157 313 2.43e-15 72.8
Msa0427430 MtrunA17_Chr4g0009561 26.111 180 126 5 2 176 138 315 9.34e-15 70.9
Msa0427430 MtrunA17_Chr1g0167921 34.021 97 64 0 3 99 61 157 1.06e-14 68.6
Msa0427430 MtrunA17_Chr1g0161101 39.796 98 49 2 33 129 403 491 1.51e-14 70.9
Msa0427430 MtrunA17_Chr4g0053251 35.000 140 84 5 2 137 153 289 1.55e-14 70.1
Msa0427430 MtrunA17_Chr2g0311611 45.588 68 30 1 37 97 2 69 2.45e-14 64.7
Msa0427430 MtrunA17_Chr7g0219991 33.684 95 61 2 1 94 258 351 2.44e-13 67.0
Msa0427430 MtrunA17_Chr1g0158031 26.380 163 106 5 1 155 1 157 6.19e-13 63.9
Msa0427430 MtrunA17_Chr5g0407731 32.075 159 100 5 1 156 150 303 1.52e-12 64.7
Msa0427430 MtrunA17_Chr3g0114871 35.849 106 59 3 12 114 176 275 1.63e-12 64.3
Msa0427430 MtrunA17_Chr8g0389941 27.119 177 119 4 3 170 168 343 9.57e-12 62.4
Msa0427430 MtrunA17_Chr1g0148781 28.125 128 88 3 54 177 195 322 2.39e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427430 AT5G51810.1 67.039 179 59 0 1 179 192 370 2.40e-91 271
Msa0427430 AT4G25420.1 66.480 179 60 0 1 179 194 372 3.30e-88 263
Msa0427430 AT5G07200.1 65.746 181 60 1 1 179 193 373 4.79e-88 263
Msa0427430 AT1G60980.1 63.128 179 63 1 1 179 194 369 4.35e-81 245
Msa0427430 AT1G44090.1 61.878 181 67 2 1 179 195 375 7.97e-80 242
Msa0427430 AT5G51810.2 65.686 102 35 0 1 102 192 293 1.82e-46 154
Msa0427430 AT4G25420.2 66.667 99 33 0 1 99 194 292 4.49e-44 148
Msa0427430 AT4G10500.1 42.581 155 85 1 1 151 168 322 6.33e-38 134
Msa0427430 AT3G21420.1 44.444 144 78 1 1 142 182 325 9.31e-38 133
Msa0427430 AT5G24530.1 40.244 164 94 2 1 160 159 322 1.49e-36 130
Msa0427430 AT4G10490.1 39.506 162 96 1 1 160 166 327 1.62e-36 130
Msa0427430 AT3G19010.1 39.375 160 95 1 2 159 165 324 7.47e-36 128
Msa0427430 AT3G19010.4 39.375 160 95 1 2 159 165 324 7.47e-36 128
Msa0427430 AT5G05600.1 42.169 166 91 3 3 163 191 356 2.51e-35 127
Msa0427430 AT4G21200.1 45.455 132 72 0 4 135 165 296 4.10e-35 126
Msa0427430 AT1G78550.2 35.329 167 105 2 1 164 100 266 4.49e-32 117
Msa0427430 AT3G11180.2 36.207 174 108 2 8 178 225 398 9.15e-32 118
Msa0427430 AT1G78550.1 35.329 167 105 2 1 164 178 344 2.02e-31 117
Msa0427430 AT3G11180.1 40.373 161 91 3 8 163 225 385 2.95e-31 117
Msa0427430 AT3G19000.1 37.888 161 98 1 1 159 169 329 1.27e-30 114
Msa0427430 AT1G15550.1 35.359 181 111 3 1 175 174 354 1.44e-30 114
Msa0427430 AT1G50960.1 42.857 126 72 0 4 129 166 291 4.05e-30 113
Msa0427430 AT2G38240.1 40.909 154 87 2 1 150 170 323 7.16e-30 112
Msa0427430 AT3G55970.1 37.952 166 98 3 1 161 179 344 1.15e-29 112
Msa0427430 AT1G17020.1 35.669 157 98 2 1 154 178 334 2.38e-29 111
Msa0427430 AT4G25310.1 37.654 162 97 3 1 159 174 334 2.80e-29 111
Msa0427430 AT2G30840.1 40.237 169 94 4 3 168 184 348 3.49e-29 110
Msa0427430 AT3G13610.1 43.846 130 71 1 34 161 215 344 3.69e-29 110
Msa0427430 AT2G36690.2 37.267 161 100 1 2 161 186 346 3.85e-29 110
Msa0427430 AT2G36690.1 37.267 161 100 1 2 161 186 346 3.85e-29 110
Msa0427430 AT5G43450.1 40.000 155 90 1 3 154 184 338 4.07e-29 110
Msa0427430 AT1G55290.1 43.411 129 71 1 30 156 211 339 1.22e-28 109
Msa0427430 AT1G80340.1 30.387 181 120 2 1 175 167 347 1.89e-28 108
Msa0427430 AT3G19010.3 42.188 128 72 1 34 159 167 294 2.27e-28 108
Msa0427430 AT5G08640.2 35.032 157 100 1 1 155 166 322 2.41e-28 108
Msa0427430 AT5G08640.1 35.032 157 100 1 1 155 166 322 2.41e-28 108
Msa0427430 AT1G17010.1 37.013 154 91 3 1 150 179 330 4.14e-28 108
Msa0427430 AT2G30830.1 37.209 172 99 4 1 168 178 344 6.27e-28 107
Msa0427430 AT4G22880.1 36.646 161 98 3 4 160 179 339 6.41e-28 107
Msa0427430 AT4G22880.2 36.646 161 98 3 4 160 179 339 6.41e-28 107
Msa0427430 AT4G22880.3 36.646 161 98 3 4 160 179 339 6.41e-28 107
Msa0427430 AT4G25300.2 35.802 162 100 3 1 159 83 243 1.04e-27 105
Msa0427430 AT3G12900.1 36.310 168 100 3 1 165 182 345 1.28e-27 106
Msa0427430 AT1G47990.1 35.165 182 99 6 1 166 126 304 1.77e-27 105
Msa0427430 AT1G04380.1 39.610 154 90 1 4 154 168 321 1.90e-27 106
Msa0427430 AT3G51240.2 39.706 136 80 1 4 137 83 218 2.09e-27 104
Msa0427430 AT5G43440.1 39.355 155 91 1 3 154 187 341 2.54e-27 106
Msa0427430 AT4G25300.1 35.802 162 100 3 1 159 177 337 2.73e-27 105
Msa0427430 AT4G23340.2 34.682 173 105 5 1 165 8 180 3.36e-27 102
Msa0427430 AT1G77330.1 33.333 165 101 3 1 156 119 283 3.99e-27 104
Msa0427430 AT3G51240.1 39.706 136 80 1 4 137 167 302 8.76e-27 104
Msa0427430 AT1G80330.1 40.714 140 78 3 30 167 203 339 1.47e-26 103
Msa0427430 AT1G03410.2 40.000 155 89 2 4 154 184 338 1.50e-26 103
Msa0427430 AT1G03410.1 39.490 157 91 2 4 156 221 377 2.25e-26 103
Msa0427430 AT1G78440.1 30.159 189 116 6 1 176 134 319 5.17e-26 102
Msa0427430 AT4G23340.1 34.682 173 105 5 1 165 126 298 5.43e-26 102
Msa0427430 AT5G59530.1 35.928 167 101 3 4 167 187 350 6.18e-26 102
Msa0427430 AT1G04350.1 37.427 171 100 3 1 167 179 346 7.00e-26 102
Msa0427430 AT2G30840.3 39.645 169 89 5 3 168 184 342 8.97e-26 101
Msa0427430 AT1G03400.1 37.736 159 92 3 8 159 178 336 9.51e-26 101
Msa0427430 AT1G30040.1 33.129 163 102 3 1 156 148 310 1.16e-25 101
Msa0427430 AT1G06620.1 35.802 162 101 1 3 161 187 348 1.42e-25 101
Msa0427430 AT5G20400.1 38.806 134 79 2 35 167 206 337 5.44e-25 99.8
Msa0427430 AT5G59540.1 36.478 159 95 2 7 159 192 350 7.59e-25 99.4
Msa0427430 AT5G63590.1 34.459 148 95 1 1 146 137 284 7.65e-25 98.6
Msa0427430 AT5G12270.1 40.580 138 76 2 30 161 205 342 2.01e-24 98.2
Msa0427430 AT5G63600.1 36.429 140 85 2 1 137 150 288 3.83e-24 97.1
Msa0427430 AT1G12010.1 31.013 158 103 3 4 157 127 282 4.52e-24 96.7
Msa0427430 AT4G16330.1 36.170 141 90 0 1 141 85 225 6.09e-24 95.1
Msa0427430 AT3G61400.1 36.000 175 103 5 4 172 191 362 6.64e-24 97.1
Msa0427430 AT2G44800.1 34.194 155 100 2 8 161 184 337 1.72e-23 95.5
Msa0427430 AT3G60290.1 31.646 158 108 0 8 165 184 341 2.06e-23 95.5
Msa0427430 AT4G16330.2 36.170 141 90 0 1 141 191 331 2.42e-23 95.5
Msa0427430 AT1G49390.2 33.099 142 92 2 35 175 127 266 4.28e-23 93.2
Msa0427430 AT5G54000.1 35.915 142 88 2 35 173 127 268 9.17e-23 92.4
Msa0427430 AT5G63600.2 36.170 141 85 3 1 137 150 289 9.67e-23 93.2
Msa0427430 AT1G62380.1 29.193 161 108 3 1 157 124 282 1.03e-22 93.2
Msa0427430 AT1G02400.1 35.762 151 91 4 31 176 177 326 1.10e-22 93.2
Msa0427430 AT1G06645.1 37.419 155 93 2 4 154 201 355 1.17e-22 93.6
Msa0427430 AT1G49390.1 33.099 142 92 2 35 175 206 345 1.47e-22 93.2
Msa0427430 AT2G25450.1 35.673 171 100 3 3 168 180 345 2.33e-22 92.4
Msa0427430 AT5G54000.2 35.915 142 88 2 35 173 207 348 2.82e-22 92.4
Msa0427430 AT5G43450.2 46.392 97 52 0 3 99 184 280 7.04e-22 90.1
Msa0427430 AT2G34555.1 30.247 162 107 3 1 156 144 305 1.29e-21 90.1
Msa0427430 AT3G19000.2 39.450 109 64 1 1 107 169 277 1.42e-21 89.4
Msa0427430 AT5G63595.1 38.889 108 66 0 28 135 155 262 6.77e-21 87.4
Msa0427430 AT4G21690.1 30.337 178 110 4 1 166 165 340 1.19e-20 87.8
Msa0427430 AT5G43440.2 44.444 99 55 0 3 101 187 285 2.09e-20 86.3
Msa0427430 AT1G03400.2 32.086 187 92 4 8 159 178 364 2.16e-20 87.4
Msa0427430 AT1G06640.1 36.538 156 93 3 4 154 191 345 2.30e-20 87.4
Msa0427430 AT5G20550.1 34.247 146 93 3 8 150 178 323 2.38e-20 87.0
Msa0427430 AT5G07480.2 30.814 172 111 3 1 165 61 231 2.74e-20 85.1
Msa0427430 AT1G05010.1 31.638 177 108 5 1 168 121 293 2.82e-20 86.7
Msa0427430 AT2G30840.2 44.330 97 54 0 3 99 184 280 3.01e-20 86.3
Msa0427430 AT5G43935.1 32.468 154 92 2 2 155 138 279 3.26e-20 85.9
Msa0427430 AT3G19010.2 41.667 96 54 1 2 95 165 260 5.35e-20 85.5
Msa0427430 AT5G58660.1 29.143 175 105 5 4 173 175 335 6.26e-20 85.9
Msa0427430 AT4G03070.1 30.286 175 100 4 3 163 139 305 6.77e-20 85.5
Msa0427430 AT1G52820.1 28.395 162 114 2 1 161 138 298 9.25e-20 85.1
Msa0427430 AT5G07480.1 30.814 172 111 3 1 165 170 340 1.04e-19 85.5
Msa0427430 AT1G06650.2 36.538 156 93 3 4 154 191 345 1.23e-19 85.1
Msa0427430 AT1G06620.2 43.299 97 55 0 3 99 187 283 1.53e-19 84.0
Msa0427430 AT5G05600.2 43.750 96 51 2 3 95 191 286 2.58e-19 83.6
Msa0427430 AT2G19590.2 39.623 106 62 2 39 142 152 257 1.38e-18 81.6
Msa0427430 AT3G47190.1 35.156 128 75 4 7 132 170 291 1.65e-18 81.6
Msa0427430 AT1G04380.2 43.434 99 55 1 4 102 168 265 1.67e-18 80.9
Msa0427430 AT4G22870.1 41.489 94 54 1 68 160 2 95 1.71e-18 77.4
Msa0427430 AT2G19590.1 39.623 106 62 2 39 142 167 272 1.76e-18 81.3
Msa0427430 AT5G51310.1 31.183 186 110 6 1 168 121 306 3.64e-17 78.2
Msa0427430 AT5G59540.2 42.697 89 51 0 7 95 192 280 7.08e-17 76.6
Msa0427430 AT3G55970.2 41.000 100 54 3 1 95 179 278 8.31e-17 76.6
Msa0427430 AT1G80320.1 29.940 167 113 3 1 165 136 300 9.79e-17 76.6
Msa0427430 AT3G46500.4 31.977 172 106 5 7 170 14 182 1.24e-16 74.3
Msa0427430 AT4G03050.2 34.091 132 82 4 49 176 274 404 1.66e-16 76.6
Msa0427430 AT4G03050.1 34.091 132 82 4 49 176 274 404 1.66e-16 76.6
Msa0427430 AT3G46500.10 31.977 172 106 5 7 170 76 244 3.43e-16 74.3
Msa0427430 AT3G46500.1 31.977 172 106 5 7 170 76 244 3.43e-16 74.3
Msa0427430 AT4G25310.2 37.143 105 65 1 56 159 202 306 3.63e-16 75.1
Msa0427430 AT4G22870.2 40.000 90 53 1 72 160 47 136 3.84e-16 72.4
Msa0427430 AT3G46500.5 31.977 172 106 5 7 170 150 318 6.34e-16 74.7
Msa0427430 AT1G06640.2 38.235 102 63 0 4 105 191 292 8.15e-15 71.2
Msa0427430 AT1G52800.1 29.050 179 120 6 1 176 137 311 1.22e-14 70.9
Msa0427430 AT1G06650.1 40.777 103 59 1 4 104 191 293 3.03e-14 69.7
Msa0427430 AT1G35190.2 36.364 132 75 3 52 178 177 304 3.23e-14 69.7
Msa0427430 AT1G06640.3 40.217 92 55 0 4 95 191 282 3.83e-14 69.3
Msa0427430 AT1G35190.1 36.364 132 75 3 52 178 200 327 3.85e-14 69.7
Msa0427430 AT3G46480.1 36.220 127 73 3 49 170 155 278 5.82e-14 68.6
Msa0427430 AT3G61400.2 38.298 94 56 2 4 95 191 284 1.18e-13 67.8
Msa0427430 AT3G49630.2 31.056 161 102 4 3 160 82 236 7.20e-13 65.5
Msa0427430 AT3G49630.3 31.056 161 102 4 3 160 151 305 1.31e-12 65.1
Msa0427430 AT3G49630.1 31.056 161 102 4 3 160 155 309 1.37e-12 65.1
Msa0427430 AT1G15540.2 30.357 112 74 2 54 163 194 303 3.99e-12 63.9
Msa0427430 AT4G16765.6 28.736 174 111 5 8 172 77 246 4.17e-12 63.2
Msa0427430 AT4G16765.1 28.736 174 111 5 8 172 77 246 4.17e-12 63.2
Msa0427430 AT4G16765.2 28.736 174 111 5 8 172 77 246 4.17e-12 63.2
Msa0427430 AT1G15540.3 30.357 112 74 2 54 163 198 307 4.27e-12 63.9
Msa0427430 AT1G15540.1 30.357 112 74 2 54 163 191 300 4.47e-12 63.5
Msa0427430 AT1G15540.4 30.357 112 74 2 54 163 191 300 4.47e-12 63.5
Msa0427430 AT3G46490.1 28.571 175 113 4 8 174 158 328 7.22e-12 63.2
Msa0427430 AT3G49620.1 31.496 127 83 4 3 126 180 305 1.30e-11 62.4
Msa0427430 AT4G16765.3 30.921 152 95 4 8 150 77 227 1.36e-11 61.6
Msa0427430 AT3G50210.2 34.783 115 61 3 33 137 103 213 5.09e-11 60.1

Find 89 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATTATCTTTAGTAATTA+TGG 0.148613 3_2:-78109117 Msa0427430:CDS
GAGCTCTTGGCCATTAGTTT+GGG 0.232990 3_2:-78109095 Msa0427430:CDS
GGAGCTCTTGGCCATTAGTT+TGG 0.258063 3_2:-78109096 Msa0427430:CDS
CTCACTACTTTGTCTTCTCT+TGG 0.275060 3_2:+78108607 None:intergenic
TACTTCACTTGCAACTTATA+CGG 0.279970 3_2:-78109239 Msa0427430:five_prime_UTR
GCATTCATAAAGGGTATATC+TGG 0.303962 3_2:+78109443 None:intergenic
TGTCACTGTGACATTAAATC+TGG 0.329215 3_2:+78108232 None:intergenic
TGTCACTGTGACATTAAATC+TGG 0.329215 3_2:-78108322 Msa0427430:three_prime_UTR
ACAAGGACAACCAACTATAT+AGG 0.330380 3_2:-78109340 Msa0427430:five_prime_UTR
TCATGATATGATGGGATAGA+TGG 0.337448 3_2:-78109169 Msa0427430:five_prime_UTR
CACACATTGTCATTTGCATC+TGG 0.339229 3_2:-78108290 Msa0427430:three_prime_UTR
TGTTCTTGTACTTGAATTGT+TGG 0.339651 3_2:+78109360 None:intergenic
CAACAGGGTAAAGTGGGATT+TGG 0.364197 3_2:+78109391 None:intergenic
ATGTTAATGACTAGGGCTTC+AGG 0.374814 3_2:+78108867 None:intergenic
ATGACTAGGGCTTCAGGTCT+AGG 0.375051 3_2:+78108873 None:intergenic
GAACATGGCTATCAAATATA+CGG 0.378330 3_2:+78108189 None:intergenic
CTGTTATATATGCCCTCGTT+TGG 0.383227 3_2:-78108167 Msa0427430:three_prime_UTR
AATTCCATATGCATTCATAA+AGG 0.395416 3_2:+78109433 None:intergenic
CAAGGACAACCAACTATATA+GGG 0.395966 3_2:-78109339 Msa0427430:five_prime_UTR
TAACATAGGTGATACTTTCA+TGG 0.396220 3_2:-78108850 Msa0427430:intron
GGATAGATCGTATGCATTAT+CGG 0.399287 3_2:-78109073 Msa0427430:CDS
TTTAGTAATTATGGAGCTCT+TGG 0.401090 3_2:-78109108 Msa0427430:CDS
TCAAATATACGGAAAATACT+TGG 0.407997 3_2:+78108200 None:intergenic
AAACTTGACCATGTGAAATC+AGG 0.415751 3_2:+78108541 None:intergenic
ATTGTTGGCTAGGTCACAAC+AGG 0.420053 3_2:+78109375 None:intergenic
AACTTGATCTTGATGAAGAA+TGG 0.422805 3_2:+78108941 None:intergenic
GTTATTTCCTTCCACATGTT+CGG 0.426095 3_2:-78108382 Msa0427430:three_prime_UTR
AACCATGTACAAAACATTGT+TGG 0.427544 3_2:+78109206 None:intergenic
GTACATCACATTCAAATTTG+AGG 0.428274 3_2:+78108105 None:intergenic
AATGCCACTGAAAGAAGCTT+TGG 0.433914 3_2:+78108473 None:intergenic
ACGATCTATCCCCAAACTAA+TGG 0.437456 3_2:+78109085 None:intergenic
ATACCCTTTATGAATGCATA+TGG 0.437992 3_2:-78109437 Msa0427430:five_prime_UTR
TGAAGAATGGTTAGTGATGT+TGG 0.439684 3_2:+78108954 None:intergenic
TCTAGTCTCACCCTTGGTAC+TGG 0.441580 3_2:-78108990 Msa0427430:CDS
ATTCCATATGCATTCATAAA+GGG 0.443168 3_2:+78109434 None:intergenic
AGCATATCACCCTATATAGT+TGG 0.472510 3_2:+78109330 None:intergenic
GATACAAGAGTTGCCTCCAC+AGG 0.486991 3_2:-78108681 Msa0427430:CDS
TTGTACTTGAATTGTTGGCT+AGG 0.487634 3_2:+78109365 None:intergenic
GGGTAAAGTGGGATTTGGAT+AGG 0.516482 3_2:+78109396 None:intergenic
TGTCACCCAAGTGCTTATGC+AGG 0.517547 3_2:+78108348 None:intergenic
GTCTTGCACAAACATCGTAC+AGG 0.520086 3_2:+78108139 None:intergenic
ACACATTGTCATTTGCATCT+GGG 0.526837 3_2:-78108289 Msa0427430:three_prime_UTR
TATCACCTATGTTAATGACT+AGG 0.531080 3_2:+78108859 None:intergenic
CTTCATCAAGATCAAGTTGG+AGG 0.531963 3_2:-78108936 Msa0427430:CDS
ATTCTTCATCAAGATCAAGT+TGG 0.532416 3_2:-78108939 Msa0427430:CDS
GGGCCACACAAATGTACTCA+TGG 0.533071 3_2:+78108253 None:intergenic
TAGGTCACAACAGGGTAAAG+TGG 0.533298 3_2:+78109384 None:intergenic
CGCTCCAAAGCTTCTTTCAG+TGG 0.538246 3_2:-78108477 Msa0427430:CDS
ATCACCTATGTTAATGACTA+GGG 0.546708 3_2:+78108860 None:intergenic
GAAGAATGGTTAGTGATGTT+GGG 0.550347 3_2:+78108955 None:intergenic
TGACTAGGGCTTCAGGTCTA+GGG 0.554160 3_2:+78108874 None:intergenic
CATGATATGATGGGATAGAT+GGG 0.554611 3_2:-78109168 Msa0427430:five_prime_UTR
CTGAGTGAGGGCCAGTACCA+AGG 0.561338 3_2:+78108979 None:intergenic
GTCACTGTGACATTAAATCT+GGG 0.569010 3_2:+78108233 None:intergenic
GTCACTGTGACATTAAATCT+GGG 0.569010 3_2:-78108321 Msa0427430:three_prime_UTR
AGTGATGTTGGGTCTGAGTG+AGG 0.570842 3_2:+78108966 None:intergenic
TGAACAGATACAGAGAAAGA+AGG 0.579616 3_2:-78108651 Msa0427430:CDS
CAAATATACGGAAAATACTT+GGG 0.584606 3_2:+78108201 None:intergenic
TGAGTGAGGGCCAGTACCAA+GGG 0.588072 3_2:+78108980 None:intergenic
ATACAGAGAAAGAAGGTCAC+TGG 0.589128 3_2:-78108644 Msa0427430:CDS
AGCTCTTGGCCATTAGTTTG+GGG 0.589212 3_2:-78109094 Msa0427430:CDS
CAAAGTTCTAGTCTCACCCT+TGG 0.591172 3_2:-78108996 Msa0427430:CDS
TTGTACCCTGCATAAGCACT+TGG 0.598738 3_2:-78108354 Msa0427430:three_prime_UTR
GTGATGTTGGGTCTGAGTGA+GGG 0.599172 3_2:+78108967 None:intergenic
AGGTCACAACAGGGTAAAGT+GGG 0.600058 3_2:+78109385 None:intergenic
AAATCATCATAAGTTGCAAG+AGG 0.604605 3_2:+78108450 None:intergenic
GAAGCCCTAGTCATTAACAT+AGG 0.623392 3_2:-78108864 Msa0427430:CDS
GTACAACTCAACCGAACATG+TGG 0.626815 3_2:+78108371 None:intergenic
AACTCAACCGAACATGTGGA+AGG 0.627584 3_2:+78108375 None:intergenic
TGTACCCTGCATAAGCACTT+GGG 0.629880 3_2:-78108353 Msa0427430:three_prime_UTR
CGTACAGGGTACTCCAAACG+AGG 0.634549 3_2:+78108154 None:intergenic
GTCACCCAAGTGCTTATGCA+GGG 0.639102 3_2:+78108349 None:intergenic
ATCTGTTCACTAATGCCCTG+TGG 0.641457 3_2:+78108665 None:intergenic
GATGAACAGTGCCACACACA+AGG 0.644718 3_2:-78108001 Msa0427430:three_prime_UTR
ATACAAGAGTTGCCTCCACA+GGG 0.650891 3_2:-78108680 Msa0427430:CDS
GTGCCACACACAAGGTTGCG+TGG 0.651815 3_2:-78107993 Msa0427430:three_prime_UTR
TGTTCACTAATGCCCTGTGG+AGG 0.653770 3_2:+78108668 None:intergenic
AGACTAGAACTTTGACAAGG+TGG 0.658726 3_2:+78109005 None:intergenic
AGGGCATATATAACAGAACA+TGG 0.659952 3_2:+78108174 None:intergenic
CATCCATGAGTACATTTGTG+TGG 0.674727 3_2:-78108256 Msa0427430:three_prime_UTR
TCTTGCACAAACATCGTACA+GGG 0.681917 3_2:+78108140 None:intergenic
ACAATTCAAGTACAAGAACA+AGG 0.684880 3_2:-78109357 Msa0427430:five_prime_UTR
GTACTCATGGATGTGTTGTG+TGG 0.687384 3_2:+78108266 None:intergenic
GAAAGTATCCTGATTTCACA+TGG 0.689526 3_2:-78108549 Msa0427430:CDS
AGACCACGCAACCTTGTGTG+TGG 0.725724 3_2:+78107990 None:intergenic
AAATGACAATGTGTGTTGTG+TGG 0.726932 3_2:+78108298 None:intergenic
GTACAGGGTACTCCAAACGA+GGG 0.737527 3_2:+78108155 None:intergenic
TTGTTGGCTAGGTCACAACA+GGG 0.753223 3_2:+78109376 None:intergenic
GTGAGACTAGAACTTTGACA+AGG 0.753441 3_2:+78109002 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGTCATAATAATATAT+TGG - chr3_2:78108682-78108701 Msa0427430:CDS 10.0%
!! ATAATGTCATAATAATATAT+TGG - chr3_2:78108682-78108701 Msa0427430:CDS 10.0%
!!! TTTATATTTTCATGATATGA+TGG - chr3_2:78108250-78108269 Msa0427430:three_prime_UTR 15.0%
!!! TTATATTTTCATGATATGAT+GGG - chr3_2:78108251-78108270 Msa0427430:three_prime_UTR 15.0%
!! AGAATTATCTTTAGTAATTA+TGG - chr3_2:78108311-78108330 Msa0427430:three_prime_UTR 15.0%
!!! TTTATATTTTCATGATATGA+TGG - chr3_2:78108250-78108269 Msa0427430:three_prime_UTR 15.0%
!!! TTATATTTTCATGATATGAT+GGG - chr3_2:78108251-78108270 Msa0427430:three_prime_UTR 15.0%
!! AGAATTATCTTTAGTAATTA+TGG - chr3_2:78108311-78108330 Msa0427430:three_prime_UTR 15.0%
!!! AAGTTTTTGCAGATAATAAA+TGG - chr3_2:78108520-78108539 Msa0427430:CDS 20.0%
!!! AGTTTTTGCAGATAATAAAT+GGG - chr3_2:78108521-78108540 Msa0427430:CDS 20.0%
!! ATGATCATATGATAACAATA+TGG + chr3_2:78108631-78108650 None:intergenic 20.0%
!!! TTTTGCTTAACAAATTTTCT+GGG + chr3_2:78108850-78108869 None:intergenic 20.0%
!!! TTTTTGCTTAACAAATTTTC+TGG + chr3_2:78108851-78108870 None:intergenic 20.0%
!!! AAATTTGTTAAGCAAAAATG+AGG - chr3_2:78108853-78108872 Msa0427430:CDS 20.0%
!! AGTGAAGTAAAAAATAGTAA+TGG + chr3_2:78109020-78109039 None:intergenic 20.0%
!!! ACTATTTTTTACTTCACTTT+AGG - chr3_2:78109022-78109041 Msa0427430:CDS 20.0%
!!! AAGTTTTTGCAGATAATAAA+TGG - chr3_2:78108520-78108539 Msa0427430:CDS 20.0%
!!! AGTTTTTGCAGATAATAAAT+GGG - chr3_2:78108521-78108540 Msa0427430:CDS 20.0%
!! ATGATCATATGATAACAATA+TGG + chr3_2:78108631-78108650 None:intergenic 20.0%
!!! TTTTGCTTAACAAATTTTCT+GGG + chr3_2:78108850-78108869 None:intergenic 20.0%
!!! TTTTTGCTTAACAAATTTTC+TGG + chr3_2:78108851-78108870 None:intergenic 20.0%
!!! AAATTTGTTAAGCAAAAATG+AGG - chr3_2:78108853-78108872 Msa0427430:CDS 20.0%
!! AGTGAAGTAAAAAATAGTAA+TGG + chr3_2:78109020-78109039 None:intergenic 20.0%
!!! ACTATTTTTTACTTCACTTT+AGG - chr3_2:78109022-78109041 Msa0427430:CDS 20.0%
! ATTCCATATGCATTCATAAA+GGG + chr3_2:78107997-78108016 None:intergenic 25.0%
! AATTCCATATGCATTCATAA+AGG + chr3_2:78107998-78108017 None:intergenic 25.0%
! CATATGATAACAATATGGTA+AGG + chr3_2:78108626-78108645 None:intergenic 25.0%
!! TTTTGTGTGTGTGTATTTTT+AGG - chr3_2:78108709-78108728 Msa0427430:intron 25.0%
!!! TATTTTTAGGCGTTATCAAA+TGG - chr3_2:78108722-78108741 Msa0427430:intron 25.0%
!!! ATTTTTAGGCGTTATCAAAT+GGG - chr3_2:78108723-78108742 Msa0427430:intron 25.0%
!! TTTGCTTAACAAATTTTCTG+GGG + chr3_2:78108849-78108868 None:intergenic 25.0%
! CAAATATACGGAAAATACTT+GGG + chr3_2:78109230-78109249 None:intergenic 25.0%
! TCAAATATACGGAAAATACT+TGG + chr3_2:78109231-78109250 None:intergenic 25.0%
! ATTCCATATGCATTCATAAA+GGG + chr3_2:78107997-78108016 None:intergenic 25.0%
! AATTCCATATGCATTCATAA+AGG + chr3_2:78107998-78108017 None:intergenic 25.0%
! CATATGATAACAATATGGTA+AGG + chr3_2:78108626-78108645 None:intergenic 25.0%
!! TTTTGTGTGTGTGTATTTTT+AGG - chr3_2:78108709-78108728 Msa0427430:intron 25.0%
!!! TATTTTTAGGCGTTATCAAA+TGG - chr3_2:78108722-78108741 Msa0427430:intron 25.0%
!!! ATTTTTAGGCGTTATCAAAT+GGG - chr3_2:78108723-78108742 Msa0427430:intron 25.0%
!! TTTGCTTAACAAATTTTCTG+GGG + chr3_2:78108849-78108868 None:intergenic 25.0%
! CAAATATACGGAAAATACTT+GGG + chr3_2:78109230-78109249 None:intergenic 25.0%
! TCAAATATACGGAAAATACT+TGG + chr3_2:78109231-78109250 None:intergenic 25.0%
ATACCCTTTATGAATGCATA+TGG - chr3_2:78107991-78108010 Msa0427430:three_prime_UTR 30.0%
TGTTCTTGTACTTGAATTGT+TGG + chr3_2:78108071-78108090 None:intergenic 30.0%
ACAATTCAAGTACAAGAACA+AGG - chr3_2:78108071-78108090 Msa0427430:three_prime_UTR 30.0%
TACTTCACTTGCAACTTATA+CGG - chr3_2:78108189-78108208 Msa0427430:three_prime_UTR 30.0%
AACCATGTACAAAACATTGT+TGG + chr3_2:78108225-78108244 None:intergenic 30.0%
TTTAGTAATTATGGAGCTCT+TGG - chr3_2:78108320-78108339 Msa0427430:three_prime_UTR 30.0%
!!! TATCGGAGATTTTTTGAAGA+TGG - chr3_2:78108372-78108391 Msa0427430:three_prime_UTR 30.0%
AACTTGATCTTGATGAAGAA+TGG + chr3_2:78108490-78108509 None:intergenic 30.0%
ATTCTTCATCAAGATCAAGT+TGG - chr3_2:78108489-78108508 Msa0427430:CDS 30.0%
! TTTTGCAGATAATAAATGGG+TGG - chr3_2:78108524-78108543 Msa0427430:CDS 30.0%
ATCACCTATGTTAATGACTA+GGG + chr3_2:78108571-78108590 None:intergenic 30.0%
TATCACCTATGTTAATGACT+AGG + chr3_2:78108572-78108591 None:intergenic 30.0%
TAACATAGGTGATACTTTCA+TGG - chr3_2:78108578-78108597 Msa0427430:CDS 30.0%
! TTGCTTAACAAATTTTCTGG+GGG + chr3_2:78108848-78108867 None:intergenic 30.0%
AAATCATCATAAGTTGCAAG+AGG + chr3_2:78108981-78109000 None:intergenic 30.0%
GAACATGGCTATCAAATATA+CGG + chr3_2:78109242-78109261 None:intergenic 30.0%
GTACATCACATTCAAATTTG+AGG + chr3_2:78109326-78109345 None:intergenic 30.0%
! CATTCATAAAGGGTATATCT+GGG + chr3_2:78107987-78108006 None:intergenic 30.0%
ATACCCTTTATGAATGCATA+TGG - chr3_2:78107991-78108010 Msa0427430:three_prime_UTR 30.0%
TGTTCTTGTACTTGAATTGT+TGG + chr3_2:78108071-78108090 None:intergenic 30.0%
ACAATTCAAGTACAAGAACA+AGG - chr3_2:78108071-78108090 Msa0427430:three_prime_UTR 30.0%
TACTTCACTTGCAACTTATA+CGG - chr3_2:78108189-78108208 Msa0427430:three_prime_UTR 30.0%
AACCATGTACAAAACATTGT+TGG + chr3_2:78108225-78108244 None:intergenic 30.0%
TTTAGTAATTATGGAGCTCT+TGG - chr3_2:78108320-78108339 Msa0427430:three_prime_UTR 30.0%
!!! TATCGGAGATTTTTTGAAGA+TGG - chr3_2:78108372-78108391 Msa0427430:three_prime_UTR 30.0%
AACTTGATCTTGATGAAGAA+TGG + chr3_2:78108490-78108509 None:intergenic 30.0%
ATTCTTCATCAAGATCAAGT+TGG - chr3_2:78108489-78108508 Msa0427430:CDS 30.0%
! TTTTGCAGATAATAAATGGG+TGG - chr3_2:78108524-78108543 Msa0427430:CDS 30.0%
ATCACCTATGTTAATGACTA+GGG + chr3_2:78108571-78108590 None:intergenic 30.0%
TATCACCTATGTTAATGACT+AGG + chr3_2:78108572-78108591 None:intergenic 30.0%
TAACATAGGTGATACTTTCA+TGG - chr3_2:78108578-78108597 Msa0427430:CDS 30.0%
! TTGCTTAACAAATTTTCTGG+GGG + chr3_2:78108848-78108867 None:intergenic 30.0%
AAATCATCATAAGTTGCAAG+AGG + chr3_2:78108981-78109000 None:intergenic 30.0%
GAACATGGCTATCAAATATA+CGG + chr3_2:78109242-78109261 None:intergenic 30.0%
GTACATCACATTCAAATTTG+AGG + chr3_2:78109326-78109345 None:intergenic 30.0%
! GCATTCATAAAGGGTATATC+TGG + chr3_2:78107988-78108007 None:intergenic 35.0%
! TTGTACTTGAATTGTTGGCT+AGG + chr3_2:78108066-78108085 None:intergenic 35.0%
ACAAGGACAACCAACTATAT+AGG - chr3_2:78108088-78108107 Msa0427430:three_prime_UTR 35.0%
CAAGGACAACCAACTATATA+GGG - chr3_2:78108089-78108108 Msa0427430:three_prime_UTR 35.0%
AGCATATCACCCTATATAGT+TGG + chr3_2:78108101-78108120 None:intergenic 35.0%
! GTCCAACAATGTTTTGTACA+TGG - chr3_2:78108220-78108239 Msa0427430:three_prime_UTR 35.0%
! TCATGATATGATGGGATAGA+TGG - chr3_2:78108259-78108278 Msa0427430:three_prime_UTR 35.0%
! CATGATATGATGGGATAGAT+GGG - chr3_2:78108260-78108279 Msa0427430:three_prime_UTR 35.0%
GGATAGATCGTATGCATTAT+CGG - chr3_2:78108355-78108374 Msa0427430:three_prime_UTR 35.0%
GAAGAATGGTTAGTGATGTT+GGG + chr3_2:78108476-78108495 None:intergenic 35.0%
TGAAGAATGGTTAGTGATGT+TGG + chr3_2:78108477-78108496 None:intergenic 35.0%
TGAACAGATACAGAGAAAGA+AGG - chr3_2:78108777-78108796 Msa0427430:intron 35.0%
!! GAAAGTATCCTGATTTCACA+TGG - chr3_2:78108879-78108898 Msa0427430:CDS 35.0%
AAACTTGACCATGTGAAATC+AGG + chr3_2:78108890-78108909 None:intergenic 35.0%
! GTTATTTCCTTCCACATGTT+CGG - chr3_2:78109046-78109065 Msa0427430:CDS 35.0%
TGTCACTGTGACATTAAATC+TGG - chr3_2:78109106-78109125 Msa0427430:CDS 35.0%
GTCACTGTGACATTAAATCT+GGG - chr3_2:78109107-78109126 Msa0427430:CDS 35.0%
AAATGACAATGTGTGTTGTG+TGG + chr3_2:78109133-78109152 None:intergenic 35.0%
! ACACATTGTCATTTGCATCT+GGG - chr3_2:78109139-78109158 Msa0427430:exon 35.0%
GTCACTGTGACATTAAATCT+GGG + chr3_2:78109107-78109126 None:intergenic 35.0%
TGTCACTGTGACATTAAATC+TGG + chr3_2:78109106-78109125 None:intergenic 35.0%
AGGGCATATATAACAGAACA+TGG + chr3_2:78109257-78109276 None:intergenic 35.0%
! GCATTCATAAAGGGTATATC+TGG + chr3_2:78107988-78108007 None:intergenic 35.0%
! TTGTACTTGAATTGTTGGCT+AGG + chr3_2:78108066-78108085 None:intergenic 35.0%
ACAAGGACAACCAACTATAT+AGG - chr3_2:78108088-78108107 Msa0427430:three_prime_UTR 35.0%
CAAGGACAACCAACTATATA+GGG - chr3_2:78108089-78108108 Msa0427430:three_prime_UTR 35.0%
AGCATATCACCCTATATAGT+TGG + chr3_2:78108101-78108120 None:intergenic 35.0%
! GTCCAACAATGTTTTGTACA+TGG - chr3_2:78108220-78108239 Msa0427430:three_prime_UTR 35.0%
! TCATGATATGATGGGATAGA+TGG - chr3_2:78108259-78108278 Msa0427430:three_prime_UTR 35.0%
! CATGATATGATGGGATAGAT+GGG - chr3_2:78108260-78108279 Msa0427430:three_prime_UTR 35.0%
GGATAGATCGTATGCATTAT+CGG - chr3_2:78108355-78108374 Msa0427430:three_prime_UTR 35.0%
GAAGAATGGTTAGTGATGTT+GGG + chr3_2:78108476-78108495 None:intergenic 35.0%
TGAAGAATGGTTAGTGATGT+TGG + chr3_2:78108477-78108496 None:intergenic 35.0%
TGAACAGATACAGAGAAAGA+AGG - chr3_2:78108777-78108796 Msa0427430:intron 35.0%
!! GAAAGTATCCTGATTTCACA+TGG - chr3_2:78108879-78108898 Msa0427430:CDS 35.0%
AAACTTGACCATGTGAAATC+AGG + chr3_2:78108890-78108909 None:intergenic 35.0%
! GTTATTTCCTTCCACATGTT+CGG - chr3_2:78109046-78109065 Msa0427430:CDS 35.0%
TGTCACTGTGACATTAAATC+TGG - chr3_2:78109106-78109125 Msa0427430:CDS 35.0%
GTCACTGTGACATTAAATCT+GGG - chr3_2:78109107-78109126 Msa0427430:CDS 35.0%
AAATGACAATGTGTGTTGTG+TGG + chr3_2:78109133-78109152 None:intergenic 35.0%
! ACACATTGTCATTTGCATCT+GGG - chr3_2:78109139-78109158 Msa0427430:exon 35.0%
GTCACTGTGACATTAAATCT+GGG + chr3_2:78109107-78109126 None:intergenic 35.0%
TGTCACTGTGACATTAAATC+TGG + chr3_2:78109106-78109125 None:intergenic 35.0%
AGGGCATATATAACAGAACA+TGG + chr3_2:78109257-78109276 None:intergenic 35.0%
ACGATCTATCCCCAAACTAA+TGG + chr3_2:78108346-78108365 None:intergenic 40.0%
AGACTAGAACTTTGACAAGG+TGG + chr3_2:78108426-78108445 None:intergenic 40.0%
GTGAGACTAGAACTTTGACA+AGG + chr3_2:78108429-78108448 None:intergenic 40.0%
!! CTTCATCAAGATCAAGTTGG+AGG - chr3_2:78108492-78108511 Msa0427430:CDS 40.0%
ATGTTAATGACTAGGGCTTC+AGG + chr3_2:78108564-78108583 None:intergenic 40.0%
GAAGCCCTAGTCATTAACAT+AGG - chr3_2:78108564-78108583 Msa0427430:CDS 40.0%
ATACAGAGAAAGAAGGTCAC+TGG - chr3_2:78108784-78108803 Msa0427430:intron 40.0%
CTCACTACTTTGTCTTCTCT+TGG + chr3_2:78108824-78108843 None:intergenic 40.0%
AATGCCACTGAAAGAAGCTT+TGG + chr3_2:78108958-78108977 None:intergenic 40.0%
! CACACATTGTCATTTGCATC+TGG - chr3_2:78109138-78109157 Msa0427430:exon 40.0%
CATCCATGAGTACATTTGTG+TGG - chr3_2:78109172-78109191 Msa0427430:five_prime_UTR 40.0%
CTGTTATATATGCCCTCGTT+TGG - chr3_2:78109261-78109280 Msa0427430:five_prime_UTR 40.0%
TCTTGCACAAACATCGTACA+GGG + chr3_2:78109291-78109310 None:intergenic 40.0%
ACGATCTATCCCCAAACTAA+TGG + chr3_2:78108346-78108365 None:intergenic 40.0%
AGACTAGAACTTTGACAAGG+TGG + chr3_2:78108426-78108445 None:intergenic 40.0%
GTGAGACTAGAACTTTGACA+AGG + chr3_2:78108429-78108448 None:intergenic 40.0%
!! CTTCATCAAGATCAAGTTGG+AGG - chr3_2:78108492-78108511 Msa0427430:CDS 40.0%
ATGTTAATGACTAGGGCTTC+AGG + chr3_2:78108564-78108583 None:intergenic 40.0%
GAAGCCCTAGTCATTAACAT+AGG - chr3_2:78108564-78108583 Msa0427430:CDS 40.0%
ATACAGAGAAAGAAGGTCAC+TGG - chr3_2:78108784-78108803 Msa0427430:intron 40.0%
CTCACTACTTTGTCTTCTCT+TGG + chr3_2:78108824-78108843 None:intergenic 40.0%
AATGCCACTGAAAGAAGCTT+TGG + chr3_2:78108958-78108977 None:intergenic 40.0%
! CACACATTGTCATTTGCATC+TGG - chr3_2:78109138-78109157 Msa0427430:exon 40.0%
CATCCATGAGTACATTTGTG+TGG - chr3_2:78109172-78109191 Msa0427430:five_prime_UTR 40.0%
CTGTTATATATGCCCTCGTT+TGG - chr3_2:78109261-78109280 Msa0427430:five_prime_UTR 40.0%
TCTTGCACAAACATCGTACA+GGG + chr3_2:78109291-78109310 None:intergenic 40.0%
GGGTAAAGTGGGATTTGGAT+AGG + chr3_2:78108035-78108054 None:intergenic 45.0%
CAACAGGGTAAAGTGGGATT+TGG + chr3_2:78108040-78108059 None:intergenic 45.0%
AGGTCACAACAGGGTAAAGT+GGG + chr3_2:78108046-78108065 None:intergenic 45.0%
TAGGTCACAACAGGGTAAAG+TGG + chr3_2:78108047-78108066 None:intergenic 45.0%
! TTGTTGGCTAGGTCACAACA+GGG + chr3_2:78108055-78108074 None:intergenic 45.0%
! ATTGTTGGCTAGGTCACAAC+AGG + chr3_2:78108056-78108075 None:intergenic 45.0%
! GAGCTCTTGGCCATTAGTTT+GGG - chr3_2:78108333-78108352 Msa0427430:three_prime_UTR 45.0%
! AGCTCTTGGCCATTAGTTTG+GGG - chr3_2:78108334-78108353 Msa0427430:three_prime_UTR 45.0%
! CAAAGTTCTAGTCTCACCCT+TGG - chr3_2:78108432-78108451 Msa0427430:three_prime_UTR 45.0%
ATACAAGAGTTGCCTCCACA+GGG - chr3_2:78108748-78108767 Msa0427430:intron 45.0%
ATCTGTTCACTAATGCCCTG+TGG + chr3_2:78108766-78108785 None:intergenic 45.0%
AACTCAACCGAACATGTGGA+AGG + chr3_2:78109056-78109075 None:intergenic 45.0%
GTACAACTCAACCGAACATG+TGG + chr3_2:78109060-78109079 None:intergenic 45.0%
TTGTACCCTGCATAAGCACT+TGG - chr3_2:78109074-78109093 Msa0427430:CDS 45.0%
TGTACCCTGCATAAGCACTT+GGG - chr3_2:78109075-78109094 Msa0427430:CDS 45.0%
GTACTCATGGATGTGTTGTG+TGG + chr3_2:78109165-78109184 None:intergenic 45.0%
GTCTTGCACAAACATCGTAC+AGG + chr3_2:78109292-78109311 None:intergenic 45.0%
GGGTAAAGTGGGATTTGGAT+AGG + chr3_2:78108035-78108054 None:intergenic 45.0%
CAACAGGGTAAAGTGGGATT+TGG + chr3_2:78108040-78108059 None:intergenic 45.0%
AGGTCACAACAGGGTAAAGT+GGG + chr3_2:78108046-78108065 None:intergenic 45.0%
TAGGTCACAACAGGGTAAAG+TGG + chr3_2:78108047-78108066 None:intergenic 45.0%
! TTGTTGGCTAGGTCACAACA+GGG + chr3_2:78108055-78108074 None:intergenic 45.0%
! ATTGTTGGCTAGGTCACAAC+AGG + chr3_2:78108056-78108075 None:intergenic 45.0%
! GAGCTCTTGGCCATTAGTTT+GGG - chr3_2:78108333-78108352 Msa0427430:three_prime_UTR 45.0%
! AGCTCTTGGCCATTAGTTTG+GGG - chr3_2:78108334-78108353 Msa0427430:three_prime_UTR 45.0%
! CAAAGTTCTAGTCTCACCCT+TGG - chr3_2:78108432-78108451 Msa0427430:three_prime_UTR 45.0%
ATACAAGAGTTGCCTCCACA+GGG - chr3_2:78108748-78108767 Msa0427430:intron 45.0%
ATCTGTTCACTAATGCCCTG+TGG + chr3_2:78108766-78108785 None:intergenic 45.0%
AACTCAACCGAACATGTGGA+AGG + chr3_2:78109056-78109075 None:intergenic 45.0%
GTACAACTCAACCGAACATG+TGG + chr3_2:78109060-78109079 None:intergenic 45.0%
TTGTACCCTGCATAAGCACT+TGG - chr3_2:78109074-78109093 Msa0427430:CDS 45.0%
TGTACCCTGCATAAGCACTT+GGG - chr3_2:78109075-78109094 Msa0427430:CDS 45.0%
GTACTCATGGATGTGTTGTG+TGG + chr3_2:78109165-78109184 None:intergenic 45.0%
GTCTTGCACAAACATCGTAC+AGG + chr3_2:78109292-78109311 None:intergenic 45.0%
GGAGCTCTTGGCCATTAGTT+TGG - chr3_2:78108332-78108351 Msa0427430:three_prime_UTR 50.0%
TCTAGTCTCACCCTTGGTAC+TGG - chr3_2:78108438-78108457 Msa0427430:exon 50.0%
GTGATGTTGGGTCTGAGTGA+GGG + chr3_2:78108464-78108483 None:intergenic 50.0%
AGTGATGTTGGGTCTGAGTG+AGG + chr3_2:78108465-78108484 None:intergenic 50.0%
TGACTAGGGCTTCAGGTCTA+GGG + chr3_2:78108557-78108576 None:intergenic 50.0%
ATGACTAGGGCTTCAGGTCT+AGG + chr3_2:78108558-78108577 None:intergenic 50.0%
GATACAAGAGTTGCCTCCAC+AGG - chr3_2:78108747-78108766 Msa0427430:intron 50.0%
TGTTCACTAATGCCCTGTGG+AGG + chr3_2:78108763-78108782 None:intergenic 50.0%
CGCTCCAAAGCTTCTTTCAG+TGG - chr3_2:78108951-78108970 Msa0427430:CDS 50.0%
GTCACCCAAGTGCTTATGCA+GGG + chr3_2:78109082-78109101 None:intergenic 50.0%
TGTCACCCAAGTGCTTATGC+AGG + chr3_2:78109083-78109102 None:intergenic 50.0%
GGGCCACACAAATGTACTCA+TGG + chr3_2:78109178-78109197 None:intergenic 50.0%
! GTACAGGGTACTCCAAACGA+GGG + chr3_2:78109276-78109295 None:intergenic 50.0%
GATGAACAGTGCCACACACA+AGG - chr3_2:78109427-78109446 Msa0427430:five_prime_UTR 50.0%
GGAGCTCTTGGCCATTAGTT+TGG - chr3_2:78108332-78108351 Msa0427430:three_prime_UTR 50.0%
TCTAGTCTCACCCTTGGTAC+TGG - chr3_2:78108438-78108457 Msa0427430:exon 50.0%
GTGATGTTGGGTCTGAGTGA+GGG + chr3_2:78108464-78108483 None:intergenic 50.0%
AGTGATGTTGGGTCTGAGTG+AGG + chr3_2:78108465-78108484 None:intergenic 50.0%
TGACTAGGGCTTCAGGTCTA+GGG + chr3_2:78108557-78108576 None:intergenic 50.0%
ATGACTAGGGCTTCAGGTCT+AGG + chr3_2:78108558-78108577 None:intergenic 50.0%
GATACAAGAGTTGCCTCCAC+AGG - chr3_2:78108747-78108766 Msa0427430:intron 50.0%
TGTTCACTAATGCCCTGTGG+AGG + chr3_2:78108763-78108782 None:intergenic 50.0%
CGCTCCAAAGCTTCTTTCAG+TGG - chr3_2:78108951-78108970 Msa0427430:CDS 50.0%
GTCACCCAAGTGCTTATGCA+GGG + chr3_2:78109082-78109101 None:intergenic 50.0%
TGTCACCCAAGTGCTTATGC+AGG + chr3_2:78109083-78109102 None:intergenic 50.0%
GGGCCACACAAATGTACTCA+TGG + chr3_2:78109178-78109197 None:intergenic 50.0%
! GTACAGGGTACTCCAAACGA+GGG + chr3_2:78109276-78109295 None:intergenic 50.0%
GATGAACAGTGCCACACACA+AGG - chr3_2:78109427-78109446 Msa0427430:five_prime_UTR 50.0%
TGAGTGAGGGCCAGTACCAA+GGG + chr3_2:78108451-78108470 None:intergenic 55.0%
! CGTACAGGGTACTCCAAACG+AGG + chr3_2:78109277-78109296 None:intergenic 55.0%
AGACCACGCAACCTTGTGTG+TGG + chr3_2:78109441-78109460 None:intergenic 55.0%
TGAGTGAGGGCCAGTACCAA+GGG + chr3_2:78108451-78108470 None:intergenic 55.0%
! CGTACAGGGTACTCCAAACG+AGG + chr3_2:78109277-78109296 None:intergenic 55.0%
AGACCACGCAACCTTGTGTG+TGG + chr3_2:78109441-78109460 None:intergenic 55.0%
CTGAGTGAGGGCCAGTACCA+AGG + chr3_2:78108452-78108471 None:intergenic 60.0%
GTGCCACACACAAGGTTGCG+TGG - chr3_2:78109435-78109454 Msa0427430:five_prime_UTR 60.0%
CTGAGTGAGGGCCAGTACCA+AGG + chr3_2:78108452-78108471 None:intergenic 60.0%
GTGCCACACACAAGGTTGCG+TGG - chr3_2:78109435-78109454 Msa0427430:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 78107985 78109465 78107985 ID=Msa0427430;Name=Msa0427430
chr3_2 mRNA 78107985 78109465 78107985 ID=Msa0427430-mRNA-1;Parent=Msa0427430;Name=Msa0427430-mRNA-1;_AED=0.18;_eAED=0.18;_QI=321|1|1|1|1|1|2|471|185
chr3_2 exon 78107985 78108719 78107985 ID=Msa0427430-mRNA-1:exon:20522;Parent=Msa0427430-mRNA-1
chr3_2 exon 78108851 78109465 78108851 ID=Msa0427430-mRNA-1:exon:20521;Parent=Msa0427430-mRNA-1
chr3_2 five_prime_UTR 78109145 78109465 78109145 ID=Msa0427430-mRNA-1:five_prime_utr;Parent=Msa0427430-mRNA-1
chr3_2 CDS 78108851 78109144 78108851 ID=Msa0427430-mRNA-1:cds;Parent=Msa0427430-mRNA-1
chr3_2 CDS 78108456 78108719 78108456 ID=Msa0427430-mRNA-1:cds;Parent=Msa0427430-mRNA-1
chr3_2 three_prime_UTR 78107985 78108455 78107985 ID=Msa0427430-mRNA-1:three_prime_utr;Parent=Msa0427430-mRNA-1
Gene Sequence

>Msa0427430

ATGAAAGAATTATCTTTAGTAATTATGGAGCTCTTGGCCATTAGTTTGGGGATAGATCGTATGCATTATCGGAGATTTTTTGAAGATGGTGACTCAATAATGAGATGTAACTATTATCCACCTTGTCAAAGTTCTAGTCTCACCCTTGGTACTGGCCCTCACTCAGACCCAACATCACTAACCATTCTTCATCAAGATCAAGTTGGAGGTCTTGAAGTTTTTGCAGATAATAAATGGGTGGCTGTTCGCCCTAGACCTGAAGCCCTAGTCATTAACATAGGTGATACTTTCATGGCGTTATCAAATGGGAGATACAAGAGTTGCCTCCACAGGGCATTAGTGAACAGATACAGAGAAAGAAGGTCACTGGTTTTCTTTGTGTGTCCAAGAGAAGACAAAGTAGTGAGACCCCCAGAAAATTTGTTAAGCAAAAATGAGGCAAGAAAGTATCCTGATTTCACATGGTCAAGTTTATTTGAATTTACACAAAAACACTACAGAGCTGATGTTGCTACGCTCCAAAGCTTCTTTCAGTGGCATTCCTCTTGCAACTTATGA
Protein sequence

>Msa0427430

MKELSLVIMELLAISLGIDRMHYRRFFEDGDSIMRCNYYPPCQSSSLTLGTGPHSDPTSLTILHQDQVGGLEVFADNKWVAVRPRPEALVINIGDTFMALSNGRYKSCLHRALVNRYRERRSLVFFVCPREDKVVRPPENLLSKNEARKYPDFTWSSLFEFTQKHYRADVATLQSFFQWHSSCNL*