Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300980 | sp|Q93WC4|IAA29_ARATH | 27.273 | 220 | 116 | 8 | 1 | 181 | 1 | 215 | 4.89e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300980 | A0A072UQL9 | 92.265 | 181 | 13 | 1 | 1 | 181 | 1 | 180 | 1.72e-95 | 286 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1300980 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa1300980 | 0.810873 | 9.280733e-51 | -8.615850e-47 |
| Msa0002700 | Msa1300980 | 0.812343 | 4.446245e-51 | -8.615850e-47 |
| Msa0009210 | Msa1300980 | 0.834289 | 3.267459e-56 | -8.615850e-47 |
| Msa0011910 | Msa1300980 | 0.815406 | 9.395825e-52 | -8.615850e-47 |
| Msa0017980 | Msa1300980 | 0.802379 | 5.768050e-49 | -8.615850e-47 |
| Msa0018010 | Msa1300980 | 0.813847 | 2.080588e-51 | -8.615850e-47 |
| Msa0018110 | Msa1300980 | 0.802084 | 6.633481e-49 | -8.615850e-47 |
| Msa0021240 | Msa1300980 | 0.802976 | 4.345411e-49 | -8.615850e-47 |
| Msa0021570 | Msa1300980 | 0.821838 | 3.263414e-53 | -8.615850e-47 |
| Msa0024070 | Msa1300980 | 0.850580 | 1.548586e-60 | -8.615850e-47 |
| Msa0027020 | Msa1300980 | 0.808195 | 3.490025e-50 | -8.615850e-47 |
| Msa0028410 | Msa1300980 | 0.833642 | 4.742677e-56 | -8.615850e-47 |
| Msa0028450 | Msa1300980 | 0.812208 | 4.760098e-51 | -8.615850e-47 |
| Msa0028940 | Msa1300980 | 0.822367 | 2.460378e-53 | -8.615850e-47 |
| Msa0032350 | Msa1300980 | 0.816129 | 6.482912e-52 | -8.615850e-47 |
| Msa0044700 | Msa1300980 | 0.822536 | 2.248383e-53 | -8.615850e-47 |
| Msa0045530 | Msa1300980 | 0.838677 | 2.494833e-57 | -8.615850e-47 |
| Msa0046090 | Msa1300980 | 0.811532 | 6.679251e-51 | -8.615850e-47 |
| Msa0047400 | Msa1300980 | 0.810695 | 1.014546e-50 | -8.615850e-47 |
| Msa0058140 | Msa1300980 | 0.811825 | 5.768818e-51 | -8.615850e-47 |
| Msa0058970 | Msa1300980 | 0.816684 | 4.871023e-52 | -8.615850e-47 |
| Msa0060720 | Msa1300980 | 0.813387 | 2.626281e-51 | -8.615850e-47 |
| Msa0067820 | Msa1300980 | 0.826534 | 2.573389e-54 | -8.615850e-47 |
| Msa0069590 | Msa1300980 | 0.806764 | 7.020429e-50 | -8.615850e-47 |
| Msa0075080 | Msa1300980 | 0.805342 | 1.398021e-49 | -8.615850e-47 |
| Msa0075820 | Msa1300980 | 0.819640 | 1.044496e-52 | -8.615850e-47 |
| Msa0077990 | Msa1300980 | 0.810583 | 1.072632e-50 | -8.615850e-47 |
| Msa0079530 | Msa1300980 | 0.824805 | 6.616477e-54 | -8.615850e-47 |
| Msa0081300 | Msa1300980 | 0.807730 | 4.381222e-50 | -8.615850e-47 |
| Msa0092750 | Msa1300980 | 0.811510 | 6.753086e-51 | -8.615850e-47 |
| Msa0093830 | Msa1300980 | 0.813667 | 2.279436e-51 | -8.615850e-47 |
| Msa0097220 | Msa1300980 | 0.807048 | 6.115349e-50 | -8.615850e-47 |
| Msa0097490 | Msa1300980 | 0.819688 | 1.018348e-52 | -8.615850e-47 |
| Msa0102290 | Msa1300980 | 0.823169 | 1.600994e-53 | -8.615850e-47 |
| Msa0105500 | Msa1300980 | 0.804845 | 1.776387e-49 | -8.615850e-47 |
| Msa0113910 | Msa1300980 | 0.811875 | 5.624035e-51 | -8.615850e-47 |
| Msa0116780 | Msa1300980 | 0.803185 | 3.933242e-49 | -8.615850e-47 |
| Msa0605150 | Msa1300980 | 0.806367 | 8.512538e-50 | -8.615850e-47 |
| Msa0605210 | Msa1300980 | 0.811849 | 5.697894e-51 | -8.615850e-47 |
| Msa0606180 | Msa1300980 | 0.807864 | 4.105029e-50 | -8.615850e-47 |
| Msa0606260 | Msa1300980 | 0.803019 | 4.257084e-49 | -8.615850e-47 |
| Msa0607070 | Msa1300980 | 0.853536 | 2.239066e-61 | -8.615850e-47 |
| Msa0608720 | Msa1300980 | 0.824829 | 6.529468e-54 | -8.615850e-47 |
| Msa0612950 | Msa1300980 | 0.821126 | 4.766000e-53 | -8.615850e-47 |
| Msa0615460 | Msa1300980 | 0.816597 | 5.093988e-52 | -8.615850e-47 |
| Msa0616570 | Msa1300980 | 0.832516 | 9.039001e-56 | -8.615850e-47 |
| Msa0619870 | Msa1300980 | 0.802719 | 4.908505e-49 | -8.615850e-47 |
| Msa0622450 | Msa1300980 | 0.815333 | 9.756509e-52 | -8.615850e-47 |
| Msa0623350 | Msa1300980 | 0.800041 | 1.736084e-48 | -8.615850e-47 |
| Msa0625820 | Msa1300980 | 0.810829 | 9.487202e-51 | -8.615850e-47 |
| Msa0646310 | Msa1300980 | 0.837084 | 6.402468e-57 | -8.615850e-47 |
| Msa0649140 | Msa1300980 | 0.821068 | 4.913809e-53 | -8.615850e-47 |
| Msa0653690 | Msa1300980 | 0.846209 | 2.507890e-59 | -8.615850e-47 |
| Msa0654560 | Msa1300980 | 0.819590 | 1.072007e-52 | -8.615850e-47 |
| Msa0654850 | Msa1300980 | 0.802539 | 5.346829e-49 | -8.615850e-47 |
| Msa0655980 | Msa1300980 | 0.838580 | 2.642431e-57 | -8.615850e-47 |
| Msa0660160 | Msa1300980 | 0.815889 | 7.335817e-52 | -8.615850e-47 |
| Msa0663540 | Msa1300980 | 0.821700 | 3.511401e-53 | -8.615850e-47 |
| Msa0679880 | Msa1300980 | 0.811881 | 5.608005e-51 | -8.615850e-47 |
| Msa0685860 | Msa1300980 | 0.808478 | 3.036576e-50 | -8.615850e-47 |
| Msa0687650 | Msa1300980 | 0.847331 | 1.237128e-59 | -8.615850e-47 |
| Msa0687740 | Msa1300980 | 0.849724 | 2.690263e-60 | -8.615850e-47 |
| Msa0688350 | Msa1300980 | 0.804337 | 2.267231e-49 | -8.615850e-47 |
| Msa0689980 | Msa1300980 | 0.807791 | 4.253713e-50 | -8.615850e-47 |
| Msa0694810 | Msa1300980 | 0.810611 | 1.057712e-50 | -8.615850e-47 |
| Msa0695470 | Msa1300980 | 0.813662 | 2.284615e-51 | -8.615850e-47 |
| Msa0696600 | Msa1300980 | 0.806362 | 8.535111e-50 | -8.615850e-47 |
| Msa0698510 | Msa1300980 | 0.827909 | 1.205449e-54 | -8.615850e-47 |
| Msa0698680 | Msa1300980 | 0.828455 | 8.906894e-55 | -8.615850e-47 |
| Msa0699200 | Msa1300980 | 0.803913 | 2.777866e-49 | -8.615850e-47 |
| Msa0699900 | Msa1300980 | 0.830634 | 2.629245e-55 | -8.615850e-47 |
| Msa0703620 | Msa1300980 | 0.810206 | 1.293201e-50 | -8.615850e-47 |
| Msa0706300 | Msa1300980 | 0.815770 | 7.798785e-52 | -8.615850e-47 |
| Msa0708120 | Msa1300980 | 0.843227 | 1.594966e-58 | -8.615850e-47 |
| Msa0708450 | Msa1300980 | 0.817588 | 3.050269e-52 | -8.615850e-47 |
| Msa0711510 | Msa1300980 | 0.837008 | 6.695376e-57 | -8.615850e-47 |
| Msa0711860 | Msa1300980 | 0.817513 | 3.171796e-52 | -8.615850e-47 |
| Msa0713570 | Msa1300980 | 0.805172 | 1.517418e-49 | -8.615850e-47 |
| Msa0729120 | Msa1300980 | 0.810481 | 1.128017e-50 | -8.615850e-47 |
| Msa0745010 | Msa1300980 | 0.805652 | 1.203548e-49 | -8.615850e-47 |
| Msa0748470 | Msa1300980 | 0.825644 | 4.188309e-54 | -8.615850e-47 |
| Msa0751640 | Msa1300980 | 0.832464 | 9.314448e-56 | -8.615850e-47 |
| Msa0753040 | Msa1300980 | 0.804115 | 2.522030e-49 | -8.615850e-47 |
| Msa0754880 | Msa1300980 | 0.804361 | 2.241930e-49 | -8.615850e-47 |
| Msa0755550 | Msa1300980 | 0.806447 | 8.190174e-50 | -8.615850e-47 |
| Msa0772530 | Msa1300980 | 0.840889 | 6.625977e-58 | -8.615850e-47 |
| Msa0773080 | Msa1300980 | 0.810578 | 1.075041e-50 | -8.615850e-47 |
| Msa0775970 | Msa1300980 | 0.804660 | 1.941804e-49 | -8.615850e-47 |
| Msa0792490 | Msa1300980 | 0.809717 | 1.648553e-50 | -8.615850e-47 |
| Msa0794300 | Msa1300980 | 0.829770 | 4.274312e-55 | -8.615850e-47 |
| Msa0796840 | Msa1300980 | 0.802311 | 5.958457e-49 | -8.615850e-47 |
| Msa0797180 | Msa1300980 | 0.811835 | 5.739643e-51 | -8.615850e-47 |
| Msa0803930 | Msa1300980 | 0.809854 | 1.540436e-50 | -8.615850e-47 |
| Msa0807840 | Msa1300980 | 0.815784 | 7.740307e-52 | -8.615850e-47 |
| Msa0811710 | Msa1300980 | 0.817123 | 3.882158e-52 | -8.615850e-47 |
| Msa0825960 | Msa1300980 | 0.801559 | 8.505727e-49 | -8.615850e-47 |
| Msa0826820 | Msa1300980 | 0.813596 | 2.362254e-51 | -8.615850e-47 |
| Msa0831710 | Msa1300980 | 0.855023 | 8.328487e-62 | -8.615850e-47 |
| Msa0833980 | Msa1300980 | 0.819911 | 9.055056e-53 | -8.615850e-47 |
| Msa0835050 | Msa1300980 | 0.805787 | 1.127484e-49 | -8.615850e-47 |
| Msa0837040 | Msa1300980 | 0.838474 | 2.814754e-57 | -8.615850e-47 |
| Msa0122930 | Msa1300980 | 0.803549 | 3.305330e-49 | -8.615850e-47 |
| Msa0124070 | Msa1300980 | 0.818739 | 1.674615e-52 | -8.615850e-47 |
| Msa0124460 | Msa1300980 | 0.804861 | 1.763212e-49 | -8.615850e-47 |
| Msa0127110 | Msa1300980 | 0.827850 | 1.246063e-54 | -8.615850e-47 |
| Msa0147070 | Msa1300980 | 0.813852 | 2.075140e-51 | -8.615850e-47 |
| Msa0151780 | Msa1300980 | 0.804220 | 2.398511e-49 | -8.615850e-47 |
| Msa0163170 | Msa1300980 | 0.826113 | 3.240988e-54 | -8.615850e-47 |
| Msa0167160 | Msa1300980 | 0.801347 | 9.398532e-49 | -8.615850e-47 |
| Msa0168950 | Msa1300980 | 0.823802 | 1.138658e-53 | -8.615850e-47 |
| Msa0170550 | Msa1300980 | 0.826143 | 3.188408e-54 | -8.615850e-47 |
| Msa0185770 | Msa1300980 | 0.801641 | 8.181535e-49 | -8.615850e-47 |
| Msa0191180 | Msa1300980 | 0.803865 | 2.842955e-49 | -8.615850e-47 |
| Msa0195850 | Msa1300980 | 0.813274 | 2.780590e-51 | -8.615850e-47 |
| Msa0196620 | Msa1300980 | 0.820255 | 7.554524e-53 | -8.615850e-47 |
| Msa0198280 | Msa1300980 | 0.826307 | 2.914102e-54 | -8.615850e-47 |
| Msa0213020 | Msa1300980 | 0.811950 | 5.416884e-51 | -8.615850e-47 |
| Msa0225280 | Msa1300980 | 0.812419 | 4.279293e-51 | -8.615850e-47 |
| Msa0231180 | Msa1300980 | 0.822831 | 1.919160e-53 | -8.615850e-47 |
| Msa0232160 | Msa1300980 | 0.823370 | 1.436686e-53 | -8.615850e-47 |
| Msa0234930 | Msa1300980 | 0.821747 | 3.426109e-53 | -8.615850e-47 |
| Msa0238530 | Msa1300980 | 0.805576 | 1.249049e-49 | -8.615850e-47 |
| Msa1225240 | Msa1300980 | 0.802123 | 6.512729e-49 | -8.615850e-47 |
| Msa1225280 | Msa1300980 | 0.818807 | 1.616359e-52 | -8.615850e-47 |
| Msa1225610 | Msa1300980 | 0.914403 | 1.998220e-84 | -8.615850e-47 |
| Msa1228260 | Msa1300980 | 0.811032 | 8.575289e-51 | -8.615850e-47 |
| Msa1235880 | Msa1300980 | 0.826107 | 3.251860e-54 | -8.615850e-47 |
| Msa1236090 | Msa1300980 | 0.831286 | 1.819018e-55 | -8.615850e-47 |
| Msa1244940 | Msa1300980 | 0.819658 | 1.034817e-52 | -8.615850e-47 |
| Msa1257860 | Msa1300980 | 0.801268 | 9.753457e-49 | -8.615850e-47 |
| Msa1263600 | Msa1300980 | 0.826792 | 2.233434e-54 | -8.615850e-47 |
| Msa1266750 | Msa1300980 | 0.800596 | 1.338240e-48 | -8.615850e-47 |
| Msa1269730 | Msa1300980 | 0.808861 | 2.515654e-50 | -8.615850e-47 |
| Msa1271220 | Msa1300980 | 0.808896 | 2.472217e-50 | -8.615850e-47 |
| Msa1297500 | Msa1300980 | 0.805030 | 1.625404e-49 | -8.615850e-47 |
| Msa1297560 | Msa1300980 | 0.803271 | 3.775528e-49 | -8.615850e-47 |
| Msa1300980 | Msa1302750 | 0.809788 | 1.591589e-50 | -8.615850e-47 |
| Msa1300980 | Msa1303040 | 0.831166 | 1.947639e-55 | -8.615850e-47 |
| Msa1300980 | Msa1303690 | 0.808660 | 2.776229e-50 | -8.615850e-47 |
| Msa1300980 | Msa1308430 | 0.807613 | 4.640821e-50 | -8.615850e-47 |
| Msa1300980 | Msa1315990 | 0.827159 | 1.824713e-54 | -8.615850e-47 |
| Msa1300980 | Msa1317090 | 0.818651 | 1.754145e-52 | -8.615850e-47 |
| Msa1300980 | Msa1325260 | 0.820517 | 6.577474e-53 | -8.615850e-47 |
| Msa1300980 | Msa1325270 | 0.811836 | 5.735810e-51 | -8.615850e-47 |
| Msa1300980 | Msa1330080 | 0.801839 | 7.449890e-49 | -8.615850e-47 |
| Msa1300980 | Msa1331490 | 0.823865 | 1.100028e-53 | -8.615850e-47 |
| Msa1300980 | Msa1331530 | 0.800237 | 1.583402e-48 | -8.615850e-47 |
| Msa1300980 | Msa1334690 | 0.810640 | 1.042467e-50 | -8.615850e-47 |
| Msa1300980 | Msa1337950 | 0.809726 | 1.641324e-50 | -8.615850e-47 |
| Msa1300980 | Msa1341710 | 0.801379 | 9.259113e-49 | -8.615850e-47 |
| Msa1300980 | Msa1341850 | 0.820151 | 7.981549e-53 | -8.615850e-47 |
| Msa1300980 | Msa1346890 | 0.806815 | 6.847883e-50 | -8.615850e-47 |
| Msa1300980 | Msa1348180 | 0.801020 | 1.096487e-48 | -8.615850e-47 |
| Msa1300980 | Msa1350590 | 0.810424 | 1.160484e-50 | -8.615850e-47 |
| Msa1300980 | Msa1363170 | 0.810062 | 1.389287e-50 | -8.615850e-47 |
| Msa1300980 | Msa1364650 | 0.823815 | 1.130423e-53 | -8.615850e-47 |
| Msa1300980 | Msa1371690 | 0.836814 | 7.507022e-57 | -8.615850e-47 |
| Msa1300980 | Msa1372460 | 0.821062 | 4.930426e-53 | -8.615850e-47 |
| Msa1300980 | Msa1373340 | 0.814119 | 1.811718e-51 | -8.615850e-47 |
| Msa1300980 | Msa1373930 | 0.810287 | 1.242219e-50 | -8.615850e-47 |
| Msa1300980 | Msa1375120 | 0.805675 | 1.190729e-49 | -8.615850e-47 |
| Msa1300980 | Msa1375650 | 0.813486 | 2.498021e-51 | -8.615850e-47 |
| Msa1300980 | Msa1376230 | 0.825768 | 3.914515e-54 | -8.615850e-47 |
| Msa1300980 | Msa1381830 | 0.804571 | 2.026423e-49 | -8.615850e-47 |
| Msa1300980 | Msa1386820 | 0.811268 | 7.622553e-51 | -8.615850e-47 |
| Msa1300980 | Msa1388010 | 0.818644 | 1.759966e-52 | -8.615850e-47 |
| Msa1300980 | Msa1390330 | 0.802973 | 4.350660e-49 | -8.615850e-47 |
| Msa1300980 | Msa1405990 | 0.818611 | 1.791056e-52 | -8.615850e-47 |
| Msa1300980 | Msa1412750 | 0.811958 | 5.396245e-51 | -8.615850e-47 |
| Msa1300980 | Msa1412810 | 0.817242 | 3.650988e-52 | -8.615850e-47 |
| Msa1300980 | Msa1414280 | 0.809762 | 1.612054e-50 | -8.615850e-47 |
| Msa1300980 | Msa1425050 | 0.803040 | 4.214755e-49 | -8.615850e-47 |
| Msa1300980 | Msa1429180 | 0.821078 | 4.887499e-53 | -8.615850e-47 |
| Msa1300980 | Msa1430940 | 0.808573 | 2.898763e-50 | -8.615850e-47 |
| Msa1300980 | Msa1434860 | 0.818732 | 1.681290e-52 | -8.615850e-47 |
| Msa1300980 | Msa1444690 | 0.809691 | 1.669382e-50 | -8.615850e-47 |
| Msa1300980 | Msa1444750 | 0.822209 | 2.676895e-53 | -8.615850e-47 |
| Msa1300980 | Msa1449140 | 0.890819 | 6.977197e-74 | -8.615850e-47 |
| Msa1300980 | Msa1449320 | 0.801111 | 1.050350e-48 | -8.615850e-47 |
| Msa1300980 | Msa1453130 | 0.823424 | 1.395251e-53 | -8.615850e-47 |
| Msa1300980 | Msa1453900 | 0.822764 | 1.989711e-53 | -8.615850e-47 |
| Msa1300980 | Msa1455000 | 0.834825 | 2.395525e-56 | -8.615850e-47 |
| Msa1300980 | Msa1460340 | 0.820960 | 5.202765e-53 | -8.615850e-47 |
| Msa1300980 | Msa1462700 | 0.824101 | 9.688365e-54 | -8.615850e-47 |
| Msa1300980 | Msa1465350 | 0.844016 | 9.814683e-59 | -8.615850e-47 |
| Msa1300980 | Msa1465950 | 0.802085 | 6.630539e-49 | -8.615850e-47 |
| Msa0369080 | Msa1300980 | 0.802528 | 5.375881e-49 | -8.615850e-47 |
| Msa0371010 | Msa1300980 | 0.822151 | 2.761188e-53 | -8.615850e-47 |
| Msa0371050 | Msa1300980 | 0.815177 | 1.056729e-51 | -8.615850e-47 |
| Msa0371640 | Msa1300980 | 0.807324 | 5.344841e-50 | -8.615850e-47 |
| Msa0376760 | Msa1300980 | 0.844242 | 8.536580e-59 | -8.615850e-47 |
| Msa0377990 | Msa1300980 | 0.805857 | 1.090255e-49 | -8.615850e-47 |
| Msa0378210 | Msa1300980 | 0.810836 | 9.455701e-51 | -8.615850e-47 |
| Msa0379090 | Msa1300980 | 0.807595 | 4.680457e-50 | -8.615850e-47 |
| Msa0380470 | Msa1300980 | 0.813429 | 2.571519e-51 | -8.615850e-47 |
| Msa0384140 | Msa1300980 | 0.803884 | 2.817361e-49 | -8.615850e-47 |
| Msa0384570 | Msa1300980 | 0.812219 | 4.732877e-51 | -8.615850e-47 |
| Msa0386230 | Msa1300980 | 0.804383 | 2.217508e-49 | -8.615850e-47 |
| Msa0386310 | Msa1300980 | 0.800726 | 1.258972e-48 | -8.615850e-47 |
| Msa0388000 | Msa1300980 | 0.826177 | 3.130753e-54 | -8.615850e-47 |
| Msa0394330 | Msa1300980 | 0.815221 | 1.032988e-51 | -8.615850e-47 |
| Msa0400880 | Msa1300980 | 0.808530 | 2.960171e-50 | -8.615850e-47 |
| Msa0400890 | Msa1300980 | 0.824564 | 7.540673e-54 | -8.615850e-47 |
| Msa0404710 | Msa1300980 | 0.804551 | 2.046270e-49 | -8.615850e-47 |
| Msa0413050 | Msa1300980 | 0.809113 | 2.221790e-50 | -8.615850e-47 |
| Msa0416430 | Msa1300980 | 0.802225 | 6.207082e-49 | -8.615850e-47 |
| Msa0420100 | Msa1300980 | 0.803379 | 3.586196e-49 | -8.615850e-47 |
| Msa0427230 | Msa1300980 | 0.811119 | 8.208859e-51 | -8.615850e-47 |
| Msa0427430 | Msa1300980 | 0.802150 | 6.430242e-49 | -8.615850e-47 |
| Msa0427490 | Msa1300980 | 0.804597 | 2.001700e-49 | -8.615850e-47 |
| Msa0428300 | Msa1300980 | 0.800762 | 1.237622e-48 | -8.615850e-47 |
| Msa0429990 | Msa1300980 | 0.804117 | 2.519672e-49 | -8.615850e-47 |
| Msa0431310 | Msa1300980 | 0.814085 | 1.843645e-51 | -8.615850e-47 |
| Msa0436660 | Msa1300980 | 0.803359 | 3.619474e-49 | -8.615850e-47 |
| Msa0438990 | Msa1300980 | 0.806172 | 9.360252e-50 | -8.615850e-47 |
| Msa0439090 | Msa1300980 | 0.826201 | 3.088818e-54 | -8.615850e-47 |
| Msa0439130 | Msa1300980 | 0.818961 | 1.491654e-52 | -8.615850e-47 |
| Msa0450920 | Msa1300980 | 0.806826 | 6.811315e-50 | -8.615850e-47 |
| Msa0457600 | Msa1300980 | 0.819275 | 1.265156e-52 | -8.615850e-47 |
| Msa0462530 | Msa1300980 | 0.814308 | 1.646047e-51 | -8.615850e-47 |
| Msa0471700 | Msa1300980 | 0.844764 | 6.178018e-59 | -8.615850e-47 |
| Msa0473740 | Msa1300980 | 0.809927 | 1.485297e-50 | -8.615850e-47 |
| Msa0474220 | Msa1300980 | 0.800133 | 1.662445e-48 | -8.615850e-47 |
| Msa0474290 | Msa1300980 | 0.804655 | 1.946590e-49 | -8.615850e-47 |
| Msa0475080 | Msa1300980 | 0.817085 | 3.959805e-52 | -8.615850e-47 |
| Msa0476140 | Msa1300980 | 0.801145 | 1.033674e-48 | -8.615850e-47 |
| Msa0984230 | Msa1300980 | 0.810554 | 1.088179e-50 | -8.615850e-47 |
| Msa0985570 | Msa1300980 | 0.829413 | 5.218813e-55 | -8.615850e-47 |
| Msa0993590 | Msa1300980 | 0.811677 | 6.210224e-51 | -8.615850e-47 |
| Msa1028890 | Msa1300980 | 0.818208 | 2.209861e-52 | -8.615850e-47 |
| Msa1031190 | Msa1300980 | 0.811868 | 5.645535e-51 | -8.615850e-47 |
| Msa1031620 | Msa1300980 | 0.800733 | 1.254698e-48 | -8.615850e-47 |
| Msa1033250 | Msa1300980 | 0.823141 | 1.625383e-53 | -8.615850e-47 |
| Msa1036370 | Msa1300980 | 0.828223 | 1.013244e-54 | -8.615850e-47 |
| Msa1037440 | Msa1300980 | 0.826532 | 2.576426e-54 | -8.615850e-47 |
| Msa1045750 | Msa1300980 | 0.814986 | 1.165027e-51 | -8.615850e-47 |
| Msa1047390 | Msa1300980 | 0.832130 | 1.126845e-55 | -8.615850e-47 |
| Msa1055490 | Msa1300980 | 0.808494 | 3.013740e-50 | -8.615850e-47 |
| Msa1061420 | Msa1300980 | 0.804564 | 2.033497e-49 | -8.615850e-47 |
| Msa1066930 | Msa1300980 | 0.807723 | 4.396741e-50 | -8.615850e-47 |
| Msa1068010 | Msa1300980 | 0.817159 | 3.810222e-52 | -8.615850e-47 |
| Msa1070370 | Msa1300980 | 0.813480 | 2.506054e-51 | -8.615850e-47 |
| Msa1070710 | Msa1300980 | 0.811271 | 7.611338e-51 | -8.615850e-47 |
| Msa1072850 | Msa1300980 | 0.816768 | 4.664436e-52 | -8.615850e-47 |
| Msa1076650 | Msa1300980 | 0.816671 | 4.904242e-52 | -8.615850e-47 |
| Msa1078630 | Msa1300980 | 0.825462 | 4.627802e-54 | -8.615850e-47 |
| Msa1078800 | Msa1300980 | 0.824597 | 7.404683e-54 | -8.615850e-47 |
| Msa1082760 | Msa1300980 | 0.804877 | 1.749449e-49 | -8.615850e-47 |
| Msa1090230 | Msa1300980 | 0.800250 | 1.574002e-48 | -8.615850e-47 |
| Msa1091400 | Msa1300980 | 0.803817 | 2.909051e-49 | -8.615850e-47 |
| Msa1091450 | Msa1300980 | 0.804306 | 2.301801e-49 | -8.615850e-47 |
| Msa1095880 | Msa1300980 | 0.819404 | 1.182021e-52 | -8.615850e-47 |
| Msa1106830 | Msa1300980 | 0.801576 | 8.437267e-49 | -8.615850e-47 |
| Msa0245690 | Msa1300980 | 0.824356 | 8.439186e-54 | -8.615850e-47 |
| Msa0246510 | Msa1300980 | 0.805005 | 1.644430e-49 | -8.615850e-47 |
| Msa0266100 | Msa1300980 | 0.820062 | 8.363949e-53 | -8.615850e-47 |
| Msa0266330 | Msa1300980 | 0.821512 | 3.881821e-53 | -8.615850e-47 |
| Msa0269610 | Msa1300980 | 0.819578 | 1.079175e-52 | -8.615850e-47 |
| Msa0273270 | Msa1300980 | 0.819254 | 1.278865e-52 | -8.615850e-47 |
| Msa0275260 | Msa1300980 | 0.815036 | 1.135593e-51 | -8.615850e-47 |
| Msa0276030 | Msa1300980 | 0.809620 | 1.729096e-50 | -8.615850e-47 |
| Msa0284260 | Msa1300980 | 0.802919 | 4.463229e-49 | -8.615850e-47 |
| Msa0284980 | Msa1300980 | 0.830611 | 2.664515e-55 | -8.615850e-47 |
| Msa0288300 | Msa1300980 | 0.819732 | 9.951145e-53 | -8.615850e-47 |
| Msa0288350 | Msa1300980 | 0.820005 | 8.617714e-53 | -8.615850e-47 |
| Msa0288360 | Msa1300980 | 0.812147 | 4.907002e-51 | -8.615850e-47 |
| Msa0296100 | Msa1300980 | 0.823879 | 1.092129e-53 | -8.615850e-47 |
| Msa0298820 | Msa1300980 | 0.805791 | 1.125411e-49 | -8.615850e-47 |
| Msa0304070 | Msa1300980 | 0.801918 | 7.176207e-49 | -8.615850e-47 |
| Msa0307750 | Msa1300980 | 0.812679 | 3.754269e-51 | -8.615850e-47 |
| Msa0310270 | Msa1300980 | 0.820367 | 7.122303e-53 | -8.615850e-47 |
| Msa0313550 | Msa1300980 | 0.805896 | 1.069520e-49 | -8.615850e-47 |
| Msa0315760 | Msa1300980 | 0.800770 | 1.233204e-48 | -8.615850e-47 |
| Msa0317820 | Msa1300980 | 0.807642 | 4.575667e-50 | -8.615850e-47 |
| Msa0318280 | Msa1300980 | 0.801219 | 9.983467e-49 | -8.615850e-47 |
| Msa0322480 | Msa1300980 | 0.802405 | 5.698622e-49 | -8.615850e-47 |
| Msa0329050 | Msa1300980 | 0.827746 | 1.319731e-54 | -8.615850e-47 |
| Msa0334480 | Msa1300980 | 0.816299 | 5.939114e-52 | -8.615850e-47 |
| Msa0341710 | Msa1300980 | 0.804945 | 1.693388e-49 | -8.615850e-47 |
| Msa0341950 | Msa1300980 | 0.825640 | 4.197614e-54 | -8.615850e-47 |
| Msa0347600 | Msa1300980 | 0.808135 | 3.593548e-50 | -8.615850e-47 |
| Msa0353890 | Msa1300980 | 0.826206 | 3.080736e-54 | -8.615850e-47 |
| Msa1119420 | Msa1300980 | 0.809018 | 2.328244e-50 | -8.615850e-47 |
| Msa1123260 | Msa1300980 | 0.803007 | 4.281674e-49 | -8.615850e-47 |
| Msa1128350 | Msa1300980 | 0.800895 | 1.162752e-48 | -8.615850e-47 |
| Msa1129510 | Msa1300980 | 0.814687 | 1.357279e-51 | -8.615850e-47 |
| Msa1130850 | Msa1300980 | 0.819593 | 1.070579e-52 | -8.615850e-47 |
| Msa1131010 | Msa1300980 | 0.801043 | 1.084608e-48 | -8.615850e-47 |
| Msa1134800 | Msa1300980 | 0.828812 | 7.300962e-55 | -8.615850e-47 |
| Msa1134840 | Msa1300980 | 0.818858 | 1.574030e-52 | -8.615850e-47 |
| Msa1144470 | Msa1300980 | 0.812288 | 4.571374e-51 | -8.615850e-47 |
| Msa1154130 | Msa1300980 | 0.803081 | 4.133298e-49 | -8.615850e-47 |
| Msa1158180 | Msa1300980 | 0.812884 | 3.387019e-51 | -8.615850e-47 |
| Msa1169630 | Msa1300980 | 0.801424 | 9.063056e-49 | -8.615850e-47 |
| Msa1175740 | Msa1300980 | 0.802616 | 5.155648e-49 | -8.615850e-47 |
| Msa1177300 | Msa1300980 | 0.813344 | 2.684205e-51 | -8.615850e-47 |
| Msa1184100 | Msa1300980 | 0.814024 | 1.901801e-51 | -8.615850e-47 |
| Msa1190670 | Msa1300980 | 0.813822 | 2.106508e-51 | -8.615850e-47 |
| Msa1193680 | Msa1300980 | 0.800878 | 1.172158e-48 | -8.615850e-47 |
| Msa1203320 | Msa1300980 | 0.823790 | 1.145853e-53 | -8.615850e-47 |
| Msa1207770 | Msa1300980 | 0.802132 | 6.485401e-49 | -8.615850e-47 |
| Msa1211930 | Msa1300980 | 0.825992 | 3.464330e-54 | -8.615850e-47 |
| Msa1212070 | Msa1300980 | 0.825828 | 3.788562e-54 | -8.615850e-47 |
| Msa1215060 | Msa1300980 | 0.934069 | 7.139234e-96 | -8.615850e-47 |
| Msa1222900 | Msa1300980 | 0.824090 | 9.746543e-54 | -8.615850e-47 |
| Msa1223050 | Msa1300980 | 0.820559 | 6.434361e-53 | -8.615850e-47 |
| Msa1223520 | Msa1300980 | 0.816784 | 4.626578e-52 | -8.615850e-47 |
| Msa0485350 | Msa1300980 | 0.808888 | 2.482234e-50 | -8.615850e-47 |
| Msa0498250 | Msa1300980 | 0.806933 | 6.467056e-50 | -8.615850e-47 |
| Msa0500580 | Msa1300980 | 0.810808 | 9.589172e-51 | -8.615850e-47 |
| Msa0506700 | Msa1300980 | 0.808001 | 3.838390e-50 | -8.615850e-47 |
| Msa0506740 | Msa1300980 | 0.801338 | 9.440839e-49 | -8.615850e-47 |
| Msa0508620 | Msa1300980 | 0.808919 | 2.444568e-50 | -8.615850e-47 |
| Msa0508660 | Msa1300980 | 0.807737 | 4.367650e-50 | -8.615850e-47 |
| Msa0511930 | Msa1300980 | 0.804986 | 1.659996e-49 | -8.615850e-47 |
| Msa0517820 | Msa1300980 | 0.824188 | 9.240589e-54 | -8.615850e-47 |
| Msa0518720 | Msa1300980 | 0.809671 | 1.686056e-50 | -8.615850e-47 |
| Msa0519070 | Msa1300980 | 0.802926 | 4.448905e-49 | -8.615850e-47 |
| Msa0520450 | Msa1300980 | 0.822495 | 2.297436e-53 | -8.615850e-47 |
| Msa0522510 | Msa1300980 | 0.804865 | 1.759128e-49 | -8.615850e-47 |
| Msa0527420 | Msa1300980 | 0.838294 | 3.131801e-57 | -8.615850e-47 |
| Msa0538140 | Msa1300980 | 0.806322 | 8.700886e-50 | -8.615850e-47 |
| Msa0547780 | Msa1300980 | 0.800497 | 1.401550e-48 | -8.615850e-47 |
| Msa0548230 | Msa1300980 | 0.816657 | 4.939506e-52 | -8.615850e-47 |
| Msa0549700 | Msa1300980 | 0.824723 | 6.916138e-54 | -8.615850e-47 |
| Msa0550820 | Msa1300980 | 0.812864 | 3.421394e-51 | -8.615850e-47 |
| Msa0552920 | Msa1300980 | 0.828598 | 8.225255e-55 | -8.615850e-47 |
| Msa0562040 | Msa1300980 | 0.815936 | 7.160445e-52 | -8.615850e-47 |
| Msa0562740 | Msa1300980 | 0.815206 | 1.041255e-51 | -8.615850e-47 |
| Msa0574450 | Msa1300980 | 0.825559 | 4.388773e-54 | -8.615850e-47 |
| Msa0577910 | Msa1300980 | 0.843590 | 1.276482e-58 | -8.615850e-47 |
| Msa0578400 | Msa1300980 | 0.809014 | 2.332804e-50 | -8.615850e-47 |
| Msa0581300 | Msa1300980 | 0.975849 | 1.029877e-140 | -8.615850e-47 |
| Msa0581490 | Msa1300980 | 0.803789 | 2.948501e-49 | -8.615850e-47 |
| Msa0583810 | Msa1300980 | 0.802823 | 4.671697e-49 | -8.615850e-47 |
| Msa0851870 | Msa1300980 | 0.814272 | 1.676512e-51 | -8.615850e-47 |
| Msa0862960 | Msa1300980 | 0.807407 | 5.131985e-50 | -8.615850e-47 |
| Msa0865500 | Msa1300980 | 0.821936 | 3.097865e-53 | -8.615850e-47 |
| Msa0866150 | Msa1300980 | 0.800182 | 1.624667e-48 | -8.615850e-47 |
| Msa0866310 | Msa1300980 | 0.811591 | 6.484265e-51 | -8.615850e-47 |
| Msa0866650 | Msa1300980 | 0.851812 | 6.951875e-61 | -8.615850e-47 |
| Msa0868500 | Msa1300980 | 0.824566 | 7.530310e-54 | -8.615850e-47 |
| Msa0868510 | Msa1300980 | 0.817258 | 3.619940e-52 | -8.615850e-47 |
| Msa0868520 | Msa1300980 | 0.827032 | 1.957398e-54 | -8.615850e-47 |
| Msa0869090 | Msa1300980 | 0.808986 | 2.364919e-50 | -8.615850e-47 |
| Msa0871860 | Msa1300980 | 0.814991 | 1.161966e-51 | -8.615850e-47 |
| Msa0880200 | Msa1300980 | 0.829938 | 3.890619e-55 | -8.615850e-47 |
| Msa0888520 | Msa1300980 | 0.803081 | 4.133007e-49 | -8.615850e-47 |
| Msa0905190 | Msa1300980 | 0.811708 | 6.114705e-51 | -8.615850e-47 |
| Msa0905200 | Msa1300980 | 0.814195 | 1.743420e-51 | -8.615850e-47 |
| Msa0911710 | Msa1300980 | 0.807231 | 5.591785e-50 | -8.615850e-47 |
| Msa0929440 | Msa1300980 | 0.821142 | 4.724338e-53 | -8.615850e-47 |
| Msa0932000 | Msa1300980 | 0.831144 | 1.972110e-55 | -8.615850e-47 |
| Msa0933320 | Msa1300980 | 0.848238 | 6.961997e-60 | -8.615850e-47 |
| Msa0934100 | Msa1300980 | 0.816220 | 6.188079e-52 | -8.615850e-47 |
| Msa0934800 | Msa1300980 | 0.816068 | 6.689124e-52 | -8.615850e-47 |
| Msa0937180 | Msa1300980 | 0.805094 | 1.576094e-49 | -8.615850e-47 |
| Msa0937190 | Msa1300980 | 0.806037 | 9.990269e-50 | -8.615850e-47 |
| Msa0937200 | Msa1300980 | 0.802961 | 4.375912e-49 | -8.615850e-47 |
| Msa0941410 | Msa1300980 | 0.825441 | 4.679290e-54 | -8.615850e-47 |
| Msa0941420 | Msa1300980 | 0.824799 | 6.634728e-54 | -8.615850e-47 |
| Msa0959710 | Msa1300980 | 0.800140 | 1.656916e-48 | -8.615850e-47 |
| Msa0959970 | Msa1300980 | 0.833450 | 5.297137e-56 | -8.615850e-47 |
| Msa0967940 | Msa1300980 | 0.820766 | 5.767216e-53 | -8.615850e-47 |
| Msa0970120 | Msa1300980 | 0.801339 | 9.434013e-49 | -8.615850e-47 |
| Msa0971100 | Msa1300980 | 0.846280 | 2.399024e-59 | -8.615850e-47 |
| Msa0978540 | Msa1300980 | 0.825298 | 5.059396e-54 | -8.615850e-47 |
| Msa0978550 | Msa1300980 | 0.817055 | 4.020923e-52 | -8.615850e-47 |
| Msa0978560 | Msa1300980 | 0.830374 | 3.045002e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300980 | MtrunA17_Chr4g0064131 | 92.265 | 181 | 13 | 1 | 1 | 181 | 1 | 180 | 3.30e-99 | 286 |
| Msa1300980 | MtrunA17_Chr3g0137601 | 31.443 | 194 | 107 | 9 | 1 | 181 | 1 | 181 | 5.37e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300980 | AT4G32280.1 | 27.273 | 220 | 116 | 8 | 1 | 181 | 1 | 215 | 4.97e-15 | 71.6 |
| Msa1300980 | AT4G32280.3 | 26.471 | 204 | 109 | 7 | 1 | 168 | 1 | 199 | 5.89e-13 | 65.1 |
| Msa1300980 | AT5G25890.1 | 30.833 | 120 | 77 | 2 | 64 | 181 | 20 | 135 | 5.66e-11 | 59.3 |
Find 62 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACCCATTGATTAATATT+TGG | 0.091033 | 8_3:+62783119 | None:intergenic |
| TTGCTTTGCTCACCTTTAAT+TGG | 0.204563 | 8_3:-62783146 | Msa1300980:three_prime_UTR |
| ATATTTGGGTTTCCAATTAA+AGG | 0.209829 | 8_3:+62783134 | None:intergenic |
| TCTCTTTGAATCATGATAAT+AGG | 0.233271 | 8_3:-62785316 | Msa1300980:CDS |
| TCTGAGTGGCCAGGAGTTAA+TGG | 0.256229 | 8_3:+62785224 | None:intergenic |
| ATACCCATTGATTAATATTT+GGG | 0.271124 | 8_3:+62783120 | None:intergenic |
| CAAACATGTCCATCAAAGTT+TGG | 0.287284 | 8_3:+62784816 | None:intergenic |
| TACTCTCAACCAAACTTTGA+TGG | 0.301864 | 8_3:-62784825 | Msa1300980:CDS |
| GAATTACGTGAAGGTGAAAA+TGG | 0.315246 | 8_3:-62784900 | Msa1300980:CDS |
| TCACAATATGGAGCTTCATT+TGG | 0.317095 | 8_3:-62785402 | Msa1300980:exon |
| CTCTCTACACAATCACAATA+TGG | 0.343546 | 8_3:-62785414 | Msa1300980:exon |
| GAGAGAAAGAGTGGGAAGGT+TGG | 0.357245 | 8_3:+62785250 | None:intergenic |
| TAGACCACCACCGAGAAATA+TGG | 0.358386 | 8_3:+62782979 | None:intergenic |
| CACAATATGGAGCTTCATTT+GGG | 0.385933 | 8_3:-62785401 | Msa1300980:exon |
| TTCTTCCTCCTACAATTAAC+CGG | 0.390508 | 8_3:+62784992 | None:intergenic |
| CCCTGCTCTTAAGCAATTTG+AGG | 0.399232 | 8_3:+62783232 | None:intergenic |
| GATGGCCTCCGGTTAATTGT+AGG | 0.427386 | 8_3:-62785000 | Msa1300980:CDS |
| GATCACGTGGTCCCCATTGA+TGG | 0.439591 | 8_3:-62784941 | Msa1300980:CDS |
| GAAACCCAAATATTAATCAA+TGG | 0.447820 | 8_3:-62783124 | Msa1300980:three_prime_UTR |
| CTGAGTGGCCAGGAGTTAAT+GGG | 0.451365 | 8_3:+62785225 | None:intergenic |
| GATGATGAAGAAGCTCTTGT+TGG | 0.454535 | 8_3:-62785022 | Msa1300980:CDS |
| TAATGGGAGGAGAGAAAGAG+TGG | 0.454609 | 8_3:+62785241 | None:intergenic |
| TCTCTCCTCCCATTAACTCC+TGG | 0.458165 | 8_3:-62785233 | Msa1300980:CDS |
| CATAGCTATTTATTAATGAA+AGG | 0.459720 | 8_3:+62785477 | None:intergenic |
| AGAAAGAGTGGGAAGGTTGG+TGG | 0.462033 | 8_3:+62785253 | None:intergenic |
| GAACTTGAAGTCTTAAACGA+TGG | 0.468843 | 8_3:+62783185 | None:intergenic |
| GCCTCAAATTGCTTAAGAGC+AGG | 0.470661 | 8_3:-62783233 | Msa1300980:CDS |
| AAACCCAAATATTAATCAAT+GGG | 0.473163 | 8_3:-62783123 | Msa1300980:three_prime_UTR |
| ATAGCTATTTATTAATGAAA+GGG | 0.475872 | 8_3:+62785478 | None:intergenic |
| ATGGTTCTCATGATAATCAT+AGG | 0.480012 | 8_3:-62784922 | Msa1300980:CDS |
| ATTATCATGAGAACCATCAA+TGG | 0.488136 | 8_3:+62784928 | None:intergenic |
| AGCTCTTGTTGGATGGCCTC+CGG | 0.493311 | 8_3:-62785011 | Msa1300980:CDS |
| TTACTTGGTGATGGTGGTAG+TGG | 0.498349 | 8_3:+62785163 | None:intergenic |
| TGATCAACAACAGTATGAAC+TGG | 0.501567 | 8_3:-62784662 | Msa1300980:CDS |
| TTGTCCATATTTCTCGGTGG+TGG | 0.504778 | 8_3:-62782983 | Msa1300980:three_prime_UTR |
| TTATCATGAGAACCATCAAT+GGG | 0.508335 | 8_3:+62784929 | None:intergenic |
| TATTAATTACTTGGTGATGG+TGG | 0.510150 | 8_3:+62785157 | None:intergenic |
| AAATTAACGTAGTCAGAAGT+TGG | 0.516653 | 8_3:+62783057 | None:intergenic |
| TAATATTAATTACTTGGTGA+TGG | 0.522964 | 8_3:+62785154 | None:intergenic |
| CGGACGAGAATTATTATAAG+TGG | 0.529450 | 8_3:+62785367 | None:intergenic |
| CTGGTTTATCAAGACAAAGA+AGG | 0.557412 | 8_3:-62784643 | Msa1300980:intron |
| GGTTGAGAGTATGAAATGAA+TGG | 0.558722 | 8_3:+62784837 | None:intergenic |
| TCATGATCATCTGAGTGGCC+AGG | 0.559365 | 8_3:+62785215 | None:intergenic |
| GGAGGAGAGAAAGAGTGGGA+AGG | 0.576479 | 8_3:+62785246 | None:intergenic |
| AATGGGAGGAGAGAAAGAGT+GGG | 0.579242 | 8_3:+62785242 | None:intergenic |
| ATGAAGAAGCTCTTGTTGGA+TGG | 0.580018 | 8_3:-62785018 | Msa1300980:CDS |
| CCTCAAATTGCTTAAGAGCA+GGG | 0.580023 | 8_3:-62783232 | Msa1300980:CDS |
| TATCATGATTCAAAGAGAAG+TGG | 0.584987 | 8_3:+62785321 | None:intergenic |
| TACGTGAAGGTGAAAATGGA+AGG | 0.594315 | 8_3:-62784896 | Msa1300980:CDS |
| CTCAAATTGCTTAAGAGCAG+GGG | 0.598831 | 8_3:-62783231 | Msa1300980:CDS |
| GGCCTCCGGTTAATTGTAGG+AGG | 0.613414 | 8_3:-62784997 | Msa1300980:CDS |
| AGGTGTAGGAATAGCTCGAA+AGG | 0.621460 | 8_3:-62784876 | Msa1300980:CDS |
| TTAGTAGCAGCAATATCGTA+CGG | 0.636596 | 8_3:+62785347 | None:intergenic |
| GTGAGCAAAGCAAACAACGT+TGG | 0.654677 | 8_3:+62783156 | None:intergenic |
| TTCCTCCTACAATTAACCGG+AGG | 0.665193 | 8_3:+62784995 | None:intergenic |
| AAGGTGAAAATGGAAGGTGT+AGG | 0.668997 | 8_3:-62784890 | Msa1300980:CDS |
| TGGTTGTCCATATTTCTCGG+TGG | 0.670450 | 8_3:-62782986 | Msa1300980:three_prime_UTR |
| TAATCATAGGAATTACGTGA+AGG | 0.675805 | 8_3:-62784909 | Msa1300980:CDS |
| AGTGGCCAGGAGTTAATGGG+AGG | 0.697461 | 8_3:+62785228 | None:intergenic |
| CATGATCATGATCATCTGAG+TGG | 0.721603 | 8_3:+62785210 | None:intergenic |
| AAATGATGTTGAAGATCACG+TGG | 0.746908 | 8_3:-62784954 | Msa1300980:CDS |
| TATCATGAGAACCATCAATG+GGG | 0.763816 | 8_3:+62784930 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGATAAAAATAAATTTG+AGG | + | chr8_3:62782990-62783009 | None:intergenic | 10.0% |
| !! | AACTAATAATATTAATTACT+TGG | + | chr8_3:62783430-62783449 | None:intergenic | 10.0% |
| !! | GTACATTAATATTATTTATA+TGG | - | chr8_3:62783484-62783503 | Msa1300980:intron | 10.0% |
| !! | TAGAGATTAAAAAAAATATA+AGG | - | chr8_3:62784197-62784216 | Msa1300980:intron | 10.0% |
| !!! | ATAAGAAAAATATTCTTTTA+AGG | - | chr8_3:62784552-62784571 | Msa1300980:intron | 10.0% |
| !! | AATAAATGATGTATATAATT+TGG | - | chr8_3:62784582-62784601 | Msa1300980:intron | 10.0% |
| !! | GTATAAGAATATAAATTATA+TGG | + | chr8_3:62784780-62784799 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTATATTTGAAAT+CGG | - | chr8_3:62785131-62785150 | Msa1300980:intron | 10.0% |
| !! | TTCACATATATTAAAAAAAT+TGG | + | chr8_3:62785179-62785198 | None:intergenic | 10.0% |
| !! | ATAGCTATTTATTAATGAAA+GGG | + | chr8_3:62783100-62783119 | None:intergenic | 15.0% |
| !!! | ATTAGTAGTACTAATTATTT+TGG | + | chr8_3:62783826-62783845 | None:intergenic | 15.0% |
| !! | TTCAATGAATGTTTATAATT+AGG | + | chr8_3:62784033-62784052 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTATATTTGAGAA+GGG | + | chr8_3:62784543-62784562 | None:intergenic | 15.0% |
| !!! | TATTTTTCTTATATTTGAGA+AGG | + | chr8_3:62784544-62784563 | None:intergenic | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr8_3:62784874-62784893 | None:intergenic | 15.0% |
| !! | GAAAAAAAAATTCATTGTTT+AGG | + | chr8_3:62785118-62785137 | None:intergenic | 15.0% |
| !!! | TTAATTTGTATCTAAAAAGT+TGG | - | chr8_3:62785486-62785505 | Msa1300980:five_prime_UTR | 15.0% |
| !! | CATAGCTATTTATTAATGAA+AGG | + | chr8_3:62783101-62783120 | None:intergenic | 20.0% |
| !!! | TAATATTAATTACTTGGTGA+TGG | + | chr8_3:62783424-62783443 | None:intergenic | 20.0% |
| !! | AAGTACTAACATTGAAATAT+TGG | + | chr8_3:62783458-62783477 | None:intergenic | 20.0% |
| !! | TTGAAAGATGACTTATAATT+AGG | + | chr8_3:62784076-62784095 | None:intergenic | 20.0% |
| !! | AAAAAAAATATAAGGAGCAA+AGG | - | chr8_3:62784205-62784224 | Msa1300980:intron | 20.0% |
| !!! | TTGGTTTTTTCTTTTTTGTT+TGG | + | chr8_3:62784245-62784264 | None:intergenic | 20.0% |
| !! | AAAAAGAAAAAACCAACATT+AGG | - | chr8_3:62784249-62784268 | Msa1300980:intron | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr8_3:62784965-62784984 | Msa1300980:CDS | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr8_3:62784966-62784985 | Msa1300980:CDS | 20.0% |
| !! | AAATGGAATGAAATAATCAT+TGG | + | chr8_3:62785014-62785033 | None:intergenic | 20.0% |
| !! | TATATGTGAAATATGAAATC+AGG | - | chr8_3:62785189-62785208 | Msa1300980:CDS | 20.0% |
| !! | ATATGTGAAATATGAAATCA+GGG | - | chr8_3:62785190-62785209 | Msa1300980:CDS | 20.0% |
| !! | AAACCCAAATATTAATCAAT+GGG | - | chr8_3:62785452-62785471 | Msa1300980:five_prime_UTR | 20.0% |
| !!! | ATACCCATTGATTAATATTT+GGG | + | chr8_3:62785458-62785477 | None:intergenic | 20.0% |
| !!! | AATACCCATTGATTAATATT+TGG | + | chr8_3:62785459-62785478 | None:intergenic | 20.0% |
| !!! | ATTAATCAATGGGTATTTTT+TGG | - | chr8_3:62785462-62785481 | Msa1300980:five_prime_UTR | 20.0% |
| !!! | TTAATCAATGGGTATTTTTT+GGG | - | chr8_3:62785463-62785482 | Msa1300980:five_prime_UTR | 20.0% |
| !!! | AGTAGTAGTTCAATATTTTT+TGG | - | chr8_3:62785569-62785588 | Msa1300980:five_prime_UTR | 20.0% |
| ! | TCTCTTTGAATCATGATAAT+AGG | - | chr8_3:62783259-62783278 | Msa1300980:CDS | 25.0% |
| ! | TTAGTACTACTAATTAGTTG+AGG | - | chr8_3:62783832-62783851 | Msa1300980:intron | 25.0% |
| ! | GTATATATAGTGTATATGCA+CGG | - | chr8_3:62783854-62783873 | Msa1300980:intron | 25.0% |
| ! | TGTTTATAATTAGGCATACA+AGG | + | chr8_3:62784024-62784043 | None:intergenic | 25.0% |
| ! | AGTTTGCATTAAAATGTGTT+AGG | - | chr8_3:62784145-62784164 | Msa1300980:intron | 25.0% |
| !! | AAAGTTGGAGTATTTATTGA+GGG | + | chr8_3:62784908-62784927 | None:intergenic | 25.0% |
| !! | AAAAGTTGGAGTATTTATTG+AGG | + | chr8_3:62784909-62784928 | None:intergenic | 25.0% |
| ! | AAATTGTGTGAAAGAAAAGT+TGG | + | chr8_3:62784923-62784942 | None:intergenic | 25.0% |
| ! | AAATATGAAATCAGGGTTTA+GGG | - | chr8_3:62785197-62785216 | Msa1300980:CDS | 25.0% |
| ! | CAAACTTTCTCTAACAATTA+AGG | - | chr8_3:62785242-62785261 | Msa1300980:CDS | 25.0% |
| ! | CTAAATAAAACTTGTGTGTT+TGG | - | chr8_3:62785290-62785309 | Msa1300980:CDS | 25.0% |
| !! | ATATTTGGGTTTCCAATTAA+AGG | + | chr8_3:62785444-62785463 | None:intergenic | 25.0% |
| ! | GAAACCCAAATATTAATCAA+TGG | - | chr8_3:62785451-62785470 | Msa1300980:five_prime_UTR | 25.0% |
| TATCATGATTCAAAGAGAAG+TGG | + | chr8_3:62783257-62783276 | None:intergenic | 30.0% | |
| !! | TATTAATTACTTGGTGATGG+TGG | + | chr8_3:62783421-62783440 | None:intergenic | 30.0% |
| TTATCATGAGAACCATCAAT+GGG | + | chr8_3:62783649-62783668 | None:intergenic | 30.0% | |
| ATTATCATGAGAACCATCAA+TGG | + | chr8_3:62783650-62783669 | None:intergenic | 30.0% | |
| ATGGTTCTCATGATAATCAT+AGG | - | chr8_3:62783653-62783672 | Msa1300980:intron | 30.0% | |
| TAATCATAGGAATTACGTGA+AGG | - | chr8_3:62783666-62783685 | Msa1300980:intron | 30.0% | |
| TCATGTAGTTGGAAATTAAC+AGG | - | chr8_3:62783884-62783903 | Msa1300980:intron | 30.0% | |
| TTCTTGCTCAAGATATTTCA+TGG | - | chr8_3:62783963-62783982 | Msa1300980:intron | 30.0% | |
| TATCATTAATTAGTGCAAGC+TGG | - | chr8_3:62783993-62784012 | Msa1300980:intron | 30.0% | |
| CATTAAAATGTGTTAGGAGT+TGG | - | chr8_3:62784151-62784170 | Msa1300980:intron | 30.0% | |
| ACTTAACTAAGACCTAATGT+TGG | + | chr8_3:62784264-62784283 | None:intergenic | 30.0% | |
| CATGTTAAGCAACCTAAAAA+GGG | + | chr8_3:62784730-62784749 | None:intergenic | 30.0% | |
| ACATGTTAAGCAACCTAAAA+AGG | + | chr8_3:62784731-62784750 | None:intergenic | 30.0% | |
| ! | AAGTGACACTCATTTTGTAA+CGG | + | chr8_3:62784808-62784827 | None:intergenic | 30.0% |
| GTATTTATTGAGGGTAAAGT+TGG | + | chr8_3:62784899-62784918 | None:intergenic | 30.0% | |
| GAAATATGAAATCAGGGTTT+AGG | - | chr8_3:62785196-62785215 | Msa1300980:CDS | 30.0% | |
| ! | AGGGTTTAGGGTTTATAATT+AGG | - | chr8_3:62785209-62785228 | Msa1300980:CDS | 30.0% |
| ! | GGGTTTAGGGTTTATAATTA+GGG | - | chr8_3:62785210-62785229 | Msa1300980:CDS | 30.0% |
| AAATTAACGTAGTCAGAAGT+TGG | + | chr8_3:62785521-62785540 | None:intergenic | 30.0% | |
| !! | TTTTGGTTGTCCATATTTCT+CGG | - | chr8_3:62785586-62785605 | Msa1300980:five_prime_UTR | 30.0% |
| CTCTCTACACAATCACAATA+TGG | - | chr8_3:62783161-62783180 | Msa1300980:three_prime_UTR | 35.0% | |
| TCACAATATGGAGCTTCATT+TGG | - | chr8_3:62783173-62783192 | Msa1300980:three_prime_UTR | 35.0% | |
| CACAATATGGAGCTTCATTT+GGG | - | chr8_3:62783174-62783193 | Msa1300980:three_prime_UTR | 35.0% | |
| CGGACGAGAATTATTATAAG+TGG | + | chr8_3:62783211-62783230 | None:intergenic | 35.0% | |
| TTAGTAGCAGCAATATCGTA+CGG | + | chr8_3:62783231-62783250 | None:intergenic | 35.0% | |
| ! | ACGTAGTTTTTCTCAACTCT+TGG | - | chr8_3:62783284-62783303 | Msa1300980:intron | 35.0% |
| TTCTTCCTCCTACAATTAAC+CGG | + | chr8_3:62783586-62783605 | None:intergenic | 35.0% | |
| AAATGATGTTGAAGATCACG+TGG | - | chr8_3:62783621-62783640 | Msa1300980:intron | 35.0% | |
| TATCATGAGAACCATCAATG+GGG | + | chr8_3:62783648-62783667 | None:intergenic | 35.0% | |
| GAATTACGTGAAGGTGAAAA+TGG | - | chr8_3:62783675-62783694 | Msa1300980:intron | 35.0% | |
| ! | GGTTGAGAGTATGAAATGAA+TGG | + | chr8_3:62783741-62783760 | None:intergenic | 35.0% |
| TACTCTCAACCAAACTTTGA+TGG | - | chr8_3:62783750-62783769 | Msa1300980:intron | 35.0% | |
| CAAACATGTCCATCAAAGTT+TGG | + | chr8_3:62783762-62783781 | None:intergenic | 35.0% | |
| ACGGCATTAATTCATGTAGT+TGG | - | chr8_3:62783873-62783892 | Msa1300980:intron | 35.0% | |
| TGATCAACAACAGTATGAAC+TGG | - | chr8_3:62783913-62783932 | Msa1300980:intron | 35.0% | |
| CTGGTTTATCAAGACAAAGA+AGG | - | chr8_3:62783932-62783951 | Msa1300980:intron | 35.0% | |
| ATCAAGACAAAGAAGGTGAT+TGG | - | chr8_3:62783939-62783958 | Msa1300980:intron | 35.0% | |
| TTGCTCAAGATATTTCATGG+AGG | - | chr8_3:62783966-62783985 | Msa1300980:intron | 35.0% | |
| AAAATGTGTTAGGAGTTGGA+AGG | - | chr8_3:62784155-62784174 | Msa1300980:intron | 35.0% | |
| AAATATAAGGAGCAAAGGTG+TGG | - | chr8_3:62784210-62784229 | Msa1300980:intron | 35.0% | |
| ! | AACAACCTCTTCTCTTTTCT+GGG | + | chr8_3:62784350-62784369 | None:intergenic | 35.0% |
| AGTGAAAGTCTATGTGAACT+AGG | - | chr8_3:62784398-62784417 | Msa1300980:intron | 35.0% | |
| !!! | CTAGGCATGGTAAGTTTTTT+TGG | - | chr8_3:62784416-62784435 | Msa1300980:intron | 35.0% |
| !! | AATGTTAATTTGTGCCCTCA+AGG | - | chr8_3:62784607-62784626 | Msa1300980:intron | 35.0% |
| !! | ATGTTAATTTGTGCCCTCAA+GGG | - | chr8_3:62784608-62784627 | Msa1300980:intron | 35.0% |
| ! | AATGCAAAGTTGCCCTTTTT+AGG | - | chr8_3:62784715-62784734 | Msa1300980:intron | 35.0% |
| !! | CATGTTAACTTGTGTCCTAA+GGG | + | chr8_3:62784755-62784774 | None:intergenic | 35.0% |
| !! | TCATGTTAACTTGTGTCCTA+AGG | + | chr8_3:62784756-62784775 | None:intergenic | 35.0% |
| TTGGCACACAGATTAAGAAA+TGG | + | chr8_3:62785031-62785050 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8_3:62785057-62785076 | Msa1300980:intron | 35.0% |
| GAACTTGAAGTCTTAAACGA+TGG | + | chr8_3:62785393-62785412 | None:intergenic | 35.0% | |
| TTGCTTTGCTCACCTTTAAT+TGG | - | chr8_3:62785429-62785448 | Msa1300980:five_prime_UTR | 35.0% | |
| CATGATCATGATCATCTGAG+TGG | + | chr8_3:62783368-62783387 | None:intergenic | 40.0% | |
| GATGATGAAGAAGCTCTTGT+TGG | - | chr8_3:62783553-62783572 | Msa1300980:intron | 40.0% | |
| ATGAAGAAGCTCTTGTTGGA+TGG | - | chr8_3:62783557-62783576 | Msa1300980:intron | 40.0% | |
| TACGTGAAGGTGAAAATGGA+AGG | - | chr8_3:62783679-62783698 | Msa1300980:intron | 40.0% | |
| ! | AAGGTGAAAATGGAAGGTGT+AGG | - | chr8_3:62783685-62783704 | Msa1300980:intron | 40.0% |
| ! | CAACAACCTCTTCTCTTTTC+TGG | + | chr8_3:62784351-62784370 | None:intergenic | 40.0% |
| AAGAGAAGAGGTTGTTGTCA+TGG | - | chr8_3:62784354-62784373 | Msa1300980:intron | 40.0% | |
| AAGTCTATGTGAACTAGGCA+TGG | - | chr8_3:62784403-62784422 | Msa1300980:intron | 40.0% | |
| !! | GACACTCATTTTGTAACGGA+AGG | + | chr8_3:62784804-62784823 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8_3:62785061-62785080 | Msa1300980:intron | 40.0% |
| CCTCAAATTGCTTAAGAGCA+GGG | - | chr8_3:62785343-62785362 | Msa1300980:CDS | 40.0% | |
| CTCAAATTGCTTAAGAGCAG+GGG | - | chr8_3:62785344-62785363 | Msa1300980:CDS | 40.0% | |
| AATGGGAGGAGAGAAAGAGT+GGG | + | chr8_3:62783336-62783355 | None:intergenic | 45.0% | |
| TAATGGGAGGAGAGAAAGAG+TGG | + | chr8_3:62783337-62783356 | None:intergenic | 45.0% | |
| !! | TTACTTGGTGATGGTGGTAG+TGG | + | chr8_3:62783415-62783434 | None:intergenic | 45.0% |
| TTCCTCCTACAATTAACCGG+AGG | + | chr8_3:62783583-62783602 | None:intergenic | 45.0% | |
| AGGTGTAGGAATAGCTCGAA+AGG | - | chr8_3:62783699-62783718 | Msa1300980:intron | 45.0% | |
| TGTGTTAGGAGTTGGAAGGA+TGG | - | chr8_3:62784159-62784178 | Msa1300980:intron | 45.0% | |
| GTGTTAGGAGTTGGAAGGAT+GGG | - | chr8_3:62784160-62784179 | Msa1300980:intron | 45.0% | |
| TGAAGCCCAGAAAAGAGAAG+AGG | - | chr8_3:62784342-62784361 | Msa1300980:intron | 45.0% | |
| TCCTTAACATGTGCCCTTGA+GGG | + | chr8_3:62784624-62784643 | None:intergenic | 45.0% | |
| TTCCTTAACATGTGCCCTTG+AGG | + | chr8_3:62784625-62784644 | None:intergenic | 45.0% | |
| GTTGCTTAACATGTGCCCTT+AGG | - | chr8_3:62784737-62784756 | Msa1300980:intron | 45.0% | |
| !! | ATGAGTGTCGCTTTACGCTT+TGG | + | chr8_3:62785050-62785069 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8_3:62785060-62785079 | Msa1300980:intron | 45.0% |
| GCCTCAAATTGCTTAAGAGC+AGG | - | chr8_3:62785342-62785361 | Msa1300980:CDS | 45.0% | |
| CCCTGCTCTTAAGCAATTTG+AGG | + | chr8_3:62785346-62785365 | None:intergenic | 45.0% | |
| GTGAGCAAAGCAAACAACGT+TGG | + | chr8_3:62785422-62785441 | None:intergenic | 45.0% | |
| TGGTTGTCCATATTTCTCGG+TGG | - | chr8_3:62785589-62785608 | Msa1300980:five_prime_UTR | 45.0% | |
| TTGTCCATATTTCTCGGTGG+TGG | - | chr8_3:62785592-62785611 | Msa1300980:five_prime_UTR | 45.0% | |
| TAGACCACCACCGAGAAATA+TGG | + | chr8_3:62785599-62785618 | None:intergenic | 45.0% | |
| !! | TTAATTTATTTGATTAATTT+AGG | - | chr8_3:62783521-62783540 | Msa1300980:intron | 5.0% |
| !! | TATAAGAATATAAATTATAT+GGG | + | chr8_3:62784779-62784798 | None:intergenic | 5.0% |
| AGAAAGAGTGGGAAGGTTGG+TGG | + | chr8_3:62783325-62783344 | None:intergenic | 50.0% | |
| GAGAGAAAGAGTGGGAAGGT+TGG | + | chr8_3:62783328-62783347 | None:intergenic | 50.0% | |
| TCTCTCCTCCCATTAACTCC+TGG | - | chr8_3:62783342-62783361 | Msa1300980:intron | 50.0% | |
| CTGAGTGGCCAGGAGTTAAT+GGG | + | chr8_3:62783353-62783372 | None:intergenic | 50.0% | |
| TCTGAGTGGCCAGGAGTTAA+TGG | + | chr8_3:62783354-62783373 | None:intergenic | 50.0% | |
| TCATGATCATCTGAGTGGCC+AGG | + | chr8_3:62783363-62783382 | None:intergenic | 50.0% | |
| GATGGCCTCCGGTTAATTGT+AGG | - | chr8_3:62783575-62783594 | Msa1300980:intron | 50.0% | |
| GGAGGAGAGAAAGAGTGGGA+AGG | + | chr8_3:62783332-62783351 | None:intergenic | 55.0% | |
| AGTGGCCAGGAGTTAATGGG+AGG | + | chr8_3:62783350-62783369 | None:intergenic | 55.0% | |
| AGCTCTTGTTGGATGGCCTC+CGG | - | chr8_3:62783564-62783583 | Msa1300980:intron | 55.0% | |
| GGCCTCCGGTTAATTGTAGG+AGG | - | chr8_3:62783578-62783597 | Msa1300980:intron | 55.0% | |
| GATCACGTGGTCCCCATTGA+TGG | - | chr8_3:62783634-62783653 | Msa1300980:intron | 55.0% | |
| ! | GCCCTCAAGGGCACATGTTA+AGG | - | chr8_3:62784620-62784639 | Msa1300980:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 62782978 | 62785619 | 62782978 | ID=Msa1300980;Name=Msa1300980 |
| chr8_3 | mRNA | 62782978 | 62785619 | 62782978 | ID=Msa1300980-mRNA-1;Parent=Msa1300980;Name=Msa1300980-mRNA-1;_AED=0.12;_eAED=0.12;_QI=202|0.66|0.75|1|1|1|4|245|199 |
| chr8_3 | exon | 62782978 | 62783278 | 62782978 | ID=Msa1300980-mRNA-1:exon:18659;Parent=Msa1300980-mRNA-1 |
| chr8_3 | exon | 62784644 | 62784691 | 62784644 | ID=Msa1300980-mRNA-1:exon:18658;Parent=Msa1300980-mRNA-1 |
| chr8_3 | exon | 62784810 | 62785054 | 62784810 | ID=Msa1300980-mRNA-1:exon:18657;Parent=Msa1300980-mRNA-1 |
| chr8_3 | exon | 62785167 | 62785619 | 62785167 | ID=Msa1300980-mRNA-1:exon:18656;Parent=Msa1300980-mRNA-1 |
| chr8_3 | five_prime_UTR | 62785418 | 62785619 | 62785418 | ID=Msa1300980-mRNA-1:five_prime_utr;Parent=Msa1300980-mRNA-1 |
| chr8_3 | CDS | 62785167 | 62785417 | 62785167 | ID=Msa1300980-mRNA-1:cds;Parent=Msa1300980-mRNA-1 |
| chr8_3 | CDS | 62784810 | 62785054 | 62784810 | ID=Msa1300980-mRNA-1:cds;Parent=Msa1300980-mRNA-1 |
| chr8_3 | CDS | 62784644 | 62784691 | 62784644 | ID=Msa1300980-mRNA-1:cds;Parent=Msa1300980-mRNA-1 |
| chr8_3 | CDS | 62783223 | 62783278 | 62783223 | ID=Msa1300980-mRNA-1:cds;Parent=Msa1300980-mRNA-1 |
| chr8_3 | three_prime_UTR | 62782978 | 62783222 | 62782978 | ID=Msa1300980-mRNA-1:three_prime_utr;Parent=Msa1300980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
