AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1158180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1158180 MtrunA17_Chr7g0252641 99.752 404 1 0 1 404 1 404 0.0 818
Msa1158180 MtrunA17_Chr3g0144151 74.742 388 90 5 21 403 38 422 0.0 527
Msa1158180 MtrunA17_Chr2g0310421 49.544 329 161 4 69 395 82 407 3.65e-103 311
Msa1158180 MtrunA17_Chr4g0057861 47.130 331 169 5 68 395 4 331 1.57e-95 289
Msa1158180 MtrunA17_Chr3g0122971 45.921 331 154 5 67 395 4 311 1.82e-95 288
Msa1158180 MtrunA17_Chr6g0458861 46.667 330 170 5 69 395 3 329 4.75e-95 288
Msa1158180 MtrunA17_Chr8g0357071 42.188 256 124 5 150 388 59 307 1.02e-55 186
Msa1158180 MtrunA17_Chr8g0360951 43.836 146 72 3 244 388 1 137 5.20e-29 110
Msa1158180 MtrunA17_Chr7g0235831 74.468 47 11 1 166 211 36 82 1.25e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1158180 AT1G12900.5 87.654 405 43 4 1 404 43 441 0.0 669
Msa1158180 AT1G12900.1 87.654 405 43 4 1 404 1 399 0.0 667
Msa1158180 AT3G26650.1 86.173 405 46 3 1 404 1 396 0.0 657
Msa1158180 AT1G12900.3 91.404 349 29 1 56 404 3 350 0.0 605
Msa1158180 AT1G12900.4 91.404 349 29 1 56 404 3 350 0.0 605
Msa1158180 AT1G42970.1 73.711 388 89 7 21 403 39 418 0.0 531
Msa1158180 AT1G12900.2 93.952 248 15 0 157 404 70 317 1.27e-152 434
Msa1158180 AT1G79530.1 47.904 334 169 4 69 400 86 416 5.43e-100 304
Msa1158180 AT1G16300.1 44.241 382 199 6 21 400 45 414 3.32e-99 302
Msa1158180 AT1G13440.1 47.006 334 171 5 65 395 1 331 1.75e-98 297
Msa1158180 AT3G04120.1 46.108 334 174 5 65 395 1 331 8.04e-97 293
Msa1158180 AT1G13440.2 41.916 334 160 6 65 395 1 303 1.31e-79 248

Find 149 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTAGCAAATATTATT+TGG 0.131413 7_4:-47394874 None:intergenic
AATCCTTCCAAATCCGTTTA+TGG 0.131849 7_4:-47392797 None:intergenic
TGGTTTATTATATAGGTAAA+TGG 0.150079 7_4:+47392015 Msa1158180:intron
ACCAAGTAAGGATTAGATTT+TGG 0.167601 7_4:-47391669 None:intergenic
TGGCTCTCACTTCCAGTTAT+TGG 0.185348 7_4:-47394854 None:intergenic
CTCACAAAGGGTTGTTGATT+TGG 0.245442 7_4:+47394819 Msa1158180:CDS
CTCCAATCCACATATAGATT+TGG 0.274370 7_4:-47395059 None:intergenic
TCCAATCCACATATAGATTT+GGG 0.279416 7_4:-47395058 None:intergenic
CTCCTAAGGTTAATCATTCA+TGG 0.297055 7_4:+47395103 Msa1158180:three_prime_UTR
TTCCACTACAACACCTTTCC+TGG 0.298727 7_4:-47392758 None:intergenic
CTGACATTGTTGCCAATAAC+TGG 0.306527 7_4:+47394842 Msa1158180:CDS
CAGGGAGTTGGGAATAGATT+TGG 0.316973 7_4:+47393823 Msa1158180:intron
TAACCCTGCCAACCTTCCTT+GGG 0.319087 7_4:+47393023 Msa1158180:CDS
TACAATTTCTTCTTCCTTGT+AGG 0.319099 7_4:+47391807 Msa1158180:five_prime_UTR
AAGGTAGCCATAAACGGATT+TGG 0.339175 7_4:+47392790 Msa1158180:CDS
AGTCTCACATTTATATTTCA+AGG 0.340032 7_4:-47395030 None:intergenic
GGCCACTGCCTTTGCTGCTC+CGG 0.348204 7_4:-47394491 None:intergenic
CTATTTCTCAATACAAGTTT+CGG 0.355673 7_4:-47394961 None:intergenic
TGTAGCCAACCCAGCTCTTA+AGG 0.365818 7_4:+47391857 Msa1158180:CDS
ATGCTAGCCACCGTGATCTA+AGG 0.366376 7_4:+47394428 Msa1158180:CDS
AATCTAATCCTTACTTGGTT+GGG 0.368729 7_4:+47391673 Msa1158180:five_prime_UTR
GTAACCCTGCCAACCTTCCT+TGG 0.381616 7_4:+47393022 Msa1158180:CDS
GGTTTATTATATAGGTAAAT+GGG 0.383641 7_4:+47392016 Msa1158180:intron
TACACCTCCGGTGTCATTGA+TGG 0.385375 7_4:-47392878 None:intergenic
AACATTGTGCCAACTTCAAC+CGG 0.389585 7_4:+47394472 Msa1158180:CDS
CTTCCTTGTAGGCTTAATCA+TGG 0.406660 7_4:+47391818 Msa1158180:exon
GGAATAGATTTGGTGATTGA+AGG 0.408403 7_4:+47393833 Msa1158180:CDS
AAATCTAATCCTTACTTGGT+TGG 0.411892 7_4:+47391672 Msa1158180:five_prime_UTR
TCCAAAATCTAATCCTTACT+TGG 0.412598 7_4:+47391668 Msa1158180:five_prime_UTR
CTCAAGTATGATTCTACACT+TGG 0.428198 7_4:+47392919 Msa1158180:CDS
TATTGCTATTGCAGGGAGTT+GGG 0.430899 7_4:+47393812 Msa1158180:intron
AAGGTCCTTGATCAGAAATT+CGG 0.433342 7_4:+47394049 Msa1158180:CDS
TCTGGTCTCCGTAACTCATC+AGG 0.433585 7_4:+47392057 Msa1158180:CDS
TTAATAGTGTGTTTCTCCTA+AGG 0.442784 7_4:+47395089 Msa1158180:three_prime_UTR
AAAATTAAGGTAGCCATAAA+CGG 0.442922 7_4:+47392784 Msa1158180:CDS
TGTAGGCTTAATCATGGCTT+CGG 0.447549 7_4:+47391824 Msa1158180:exon
TGCTTGGTATGATAATGAAT+GGG 0.460745 7_4:+47394792 Msa1158180:CDS
GAAGGAACTTCTTGAGATGT+TGG 0.463627 7_4:+47392821 Msa1158180:CDS
CTCATGAACCCAACCAAGTA+AGG 0.465843 7_4:-47391681 None:intergenic
GAGGAGCAAGAGAAAATTGA+TGG 0.467939 7_4:-47394986 None:intergenic
TTATTGCTATTGCAGGGAGT+TGG 0.471306 7_4:+47393811 Msa1158180:intron
TTGACACCAACCACGTAAGT+TGG 0.471552 7_4:-47393950 None:intergenic
AAGGAAGGTTGGCAGGGTTA+CGG 0.472016 7_4:-47393020 None:intergenic
ATATGTTGAACCTTAAGAGC+TGG 0.473246 7_4:-47391867 None:intergenic
CATTACAGCAGGAGCTAAGA+AGG 0.473317 7_4:+47393895 Msa1158180:CDS
GATTTGGTGATTGAAGGAAC+TGG 0.476543 7_4:+47393839 Msa1158180:CDS
AAGCCTTTGGTCACCGGTGT+AGG 0.479065 7_4:-47394401 None:intergenic
GGCTAGCATCAAGAAGCCTT+TGG 0.481799 7_4:-47394414 None:intergenic
ATAAACGGATTTGGAAGGAT+TGG 0.484804 7_4:+47392799 Msa1158180:CDS
CATTACCGAATTTCTGATCA+AGG 0.485174 7_4:-47394054 None:intergenic
TGACACCAACCACGTAAGTT+GGG 0.486160 7_4:-47393949 None:intergenic
ATTATATAGGTAAATGGGAA+AGG 0.487601 7_4:+47392021 Msa1158180:intron
AGGTCAACAACCGAGACGTT+TGG 0.488985 7_4:-47394571 None:intergenic
TTTGCTGCTCCGGTTGAAGT+TGG 0.491416 7_4:-47394481 None:intergenic
AGTAAGATGATATTCATGAT+TGG 0.492508 7_4:+47391585 Msa1158180:five_prime_UTR
ACTTACTGCATTGGTTTGGA+AGG 0.493177 7_4:-47392130 None:intergenic
TGAAGGAACTGGAGTGTTTG+TGG 0.493841 7_4:+47393850 Msa1158180:CDS
GAAGATATCCTGATGAGTTA+CGG 0.496370 7_4:-47392065 None:intergenic
TTGAGCTTGCCTTTGAGTGA+TGG 0.496796 7_4:-47394523 None:intergenic
TGAGCTTGCCTTTGAGTGAT+GGG 0.499253 7_4:-47394522 None:intergenic
AGAGGCTTGCTTTACACCTC+CGG 0.502156 7_4:-47392890 None:intergenic
GAGATACCATCAGTGCCAAC+AGG 0.502256 7_4:-47392964 None:intergenic
TTGAACCTTAAGAGCTGGGT+TGG 0.502930 7_4:-47391862 None:intergenic
CATTTGAAGGTTGGAAGCAG+TGG 0.506859 7_4:+47392730 Msa1158180:intron
ACTGATGGTATCTCTGTTGA+TGG 0.508173 7_4:+47392973 Msa1158180:CDS
CTTTGAGTGATGGGAGGACA+AGG 0.511004 7_4:-47394513 None:intergenic
TTTCAGAGACAGTGCAGCCA+AGG 0.512789 7_4:+47394642 Msa1158180:CDS
TTCGTCATTGACAATGGTCA+TGG 0.513254 7_4:+47394747 Msa1158180:CDS
TATGTTGAACCTTAAGAGCT+GGG 0.513449 7_4:-47391866 None:intergenic
ATCAAGAAGCCTTTGGTCAC+CGG 0.515096 7_4:-47394407 None:intergenic
CCCCAAATCTATATGTGGAT+TGG 0.516350 7_4:+47395057 Msa1158180:three_prime_UTR
AAAGGGAGCAAGGCAGTTAG+TGG 0.519303 7_4:-47394023 None:intergenic
GAGAATACCGCTCAGCTCCT+TGG 0.524534 7_4:-47394659 None:intergenic
AACCATGAATGATTAACCTT+AGG 0.528998 7_4:-47395105 None:intergenic
TTATAGTCCTCATGCTCAAG+AGG 0.529563 7_4:-47395160 None:intergenic
CTGCCTTGCTCCCTTTGTCA+AGG 0.531344 7_4:+47394030 Msa1158180:CDS
AACTTCAACCGGAGCAGCAA+AGG 0.533569 7_4:+47394483 Msa1158180:CDS
TTGCTTGGTATGATAATGAA+TGG 0.536174 7_4:+47394791 Msa1158180:CDS
TGATCAAGGACCTTGACAAA+GGG 0.538588 7_4:-47394040 None:intergenic
TATAATTCCTCTTGAGCATG+AGG 0.538914 7_4:+47395153 Msa1158180:three_prime_UTR
TTGGAAGCAGTGGAAGATCC+AGG 0.539430 7_4:+47392740 Msa1158180:CDS
AACCGGAGCAGCAAAGGCAG+TGG 0.541553 7_4:+47394489 Msa1158180:CDS
TGAATGGGGTTACTCACAAA+GGG 0.544864 7_4:+47394807 Msa1158180:CDS
GAGATGTTGGCATGGTCGTA+AGG 0.549423 7_4:+47392834 Msa1158180:CDS
CTCTTGCACGCCTTAGATCA+CGG 0.552003 7_4:-47394438 None:intergenic
GTTAAACCTGTTGGCACTGA+TGG 0.554240 7_4:+47392958 Msa1158180:CDS
CTGATCAAGGACCTTGACAA+AGG 0.554903 7_4:-47394041 None:intergenic
ATTTGCTGAAGAAGTGAATG+AGG 0.560532 7_4:+47394618 Msa1158180:CDS
ACGGATTTGGAAGGATTGGA+AGG 0.565677 7_4:+47392803 Msa1158180:CDS
AACCCTGCCAACCTTCCTTG+GGG 0.565830 7_4:+47393024 Msa1158180:CDS
GATGCTGATGTTAAACCTGT+TGG 0.570765 7_4:+47392949 Msa1158180:CDS
AAGGTACTCATCACAGCCCC+CGG 0.572475 7_4:+47393914 Msa1158180:CDS
CTTGTCCTCCCATCACTCAA+AGG 0.573578 7_4:+47394514 Msa1158180:CDS
CTATAAAGTGTAGTAAGATG+TGG 0.574168 7_4:-47391726 None:intergenic
GCTGGGAAGCACATTACAGC+AGG 0.575296 7_4:+47393884 Msa1158180:CDS
TAGCCATAAACGGATTTGGA+AGG 0.579242 7_4:+47392794 Msa1158180:CDS
CGTTGATTCGTCATTGACAA+TGG 0.579256 7_4:+47394741 Msa1158180:CDS
ATGAATGGGGTTACTCACAA+AGG 0.581529 7_4:+47394806 Msa1158180:CDS
GGACCTTGACAAAGGGAGCA+AGG 0.581715 7_4:-47394033 None:intergenic
ATCCAGGAAAGGTGTTGTAG+TGG 0.582457 7_4:+47392756 Msa1158180:CDS
TTGGATCACAGGTATCATCA+AGG 0.582878 7_4:+47394357 Msa1158180:intron
GTGGTTGGTGTCAATGCTGA+TGG 0.586466 7_4:+47393959 Msa1158180:CDS
AAAGAATTTATTGCACAATG+AGG 0.586511 7_4:-47395005 None:intergenic
AAGCCATGATTAAGCCTACA+AGG 0.589351 7_4:-47391821 None:intergenic
CAATGACGAATCAACGGTTG+AGG 0.591375 7_4:-47394734 None:intergenic
ACATGGTGAAGGTGATTGCT+TGG 0.591983 7_4:+47394776 Msa1158180:CDS
GACATCCCAACTTACGTGGT+TGG 0.594119 7_4:+47393944 Msa1158180:CDS
TGGTATCTCTGTTGATGGAA+AGG 0.595169 7_4:+47392978 Msa1158180:CDS
ACTACCACTCACTCCTACAC+CGG 0.595936 7_4:+47394388 Msa1158180:CDS
ACAACCGAGACGTTTGGTGT+TGG 0.599911 7_4:-47394565 None:intergenic
TCGTCATTGACAATGGTCAT+GGG 0.600931 7_4:+47394748 Msa1158180:CDS
ACTCCTACACCGGTGACCAA+AGG 0.601118 7_4:+47394398 Msa1158180:CDS
GTCATTGCCATCAATGACAC+CGG 0.606230 7_4:+47392871 Msa1158180:CDS
AACTTCTTGAGATGTTGGCA+TGG 0.607812 7_4:+47392826 Msa1158180:CDS
TATAAAGTGTAGTAAGATGT+GGG 0.610312 7_4:-47391725 None:intergenic
GATGTGGGTACGTGGATGTG+TGG 0.610966 7_4:-47391710 None:intergenic
GTGTAGAATCATACTTGAGA+AGG 0.611535 7_4:-47392915 None:intergenic
TTGATGGCAATGACATCAAG+AGG 0.611921 7_4:-47392862 None:intergenic
GTCACCGGTGTAGGAGTGAG+TGG 0.617969 7_4:-47394392 None:intergenic
TGAGAAGTAGACTAATGGAG+AGG 0.620052 7_4:-47395187 None:intergenic
TGTGCCAACACCAAACGTCT+CGG 0.622747 7_4:+47394561 Msa1158180:CDS
ATCATACTTGAGAAGGTGAG+AGG 0.624740 7_4:-47392908 None:intergenic
CATTGTCAATGACGAATCAA+CGG 0.634207 7_4:-47394740 None:intergenic
CAATCCACATATAGATTTGG+GGG 0.635755 7_4:-47395056 None:intergenic
CCAATCCACATATAGATTTG+GGG 0.636689 7_4:-47395057 None:intergenic
TGTAGTAAGATGTGGGTACG+TGG 0.637314 7_4:-47391718 None:intergenic
ACCCTGCCAACCTTCCTTGG+GGG 0.638571 7_4:+47393025 Msa1158180:CDS
TGAAATATAAATGTGAGACT+AGG 0.640249 7_4:+47395033 Msa1158180:three_prime_UTR
TGGATCACAGGTATCATCAA+GGG 0.643217 7_4:+47394358 Msa1158180:intron
CTAAAATCTACAGACACAAG+TGG 0.644572 7_4:-47394697 None:intergenic
GCTTGGTATGATAATGAATG+GGG 0.645070 7_4:+47394793 Msa1158180:CDS
TCACTCAAAGGCAAGCTCAA+CGG 0.647148 7_4:+47394526 Msa1158180:CDS
TTGTGGACAGAGAAGGTGCT+GGG 0.650460 7_4:+47393867 Msa1158180:CDS
GTAGGAGTGAGTGGTAGTCA+TGG 0.651863 7_4:-47394383 None:intergenic
AATGGTCATGGGAGATGACA+TGG 0.657489 7_4:+47394759 Msa1158180:CDS
AGGAGACATCCCAACTTACG+TGG 0.657497 7_4:+47393940 Msa1158180:CDS
TTTGTGGACAGAGAAGGTGC+TGG 0.657892 7_4:+47393866 Msa1158180:CDS
AGCAGTGGAAGATCCAGGAA+AGG 0.663149 7_4:+47392745 Msa1158180:CDS
TACAAAATTACAATGGCACA+TGG 0.664845 7_4:-47394909 None:intergenic
GCTTGCCTTTGAGTGATGGG+AGG 0.668788 7_4:-47394519 None:intergenic
AGAAGTGTACAAAATTACAA+TGG 0.669736 7_4:-47394916 None:intergenic
CATGGGAGATGACATGGTGA+AGG 0.682296 7_4:+47394765 Msa1158180:CDS
TTTGAGTGATGGGAGGACAA+GGG 0.686340 7_4:-47394512 None:intergenic
ATTGCCATCAATGACACCGG+AGG 0.712158 7_4:+47392874 Msa1158180:CDS
TGCTGATGATATCATCAGCG+TGG 0.722837 7_4:-47393988 None:intergenic
AGTGCAGCCAAGGAGCTGAG+CGG 0.723974 7_4:+47394652 Msa1158180:CDS
GGAGTGTTTGTGGACAGAGA+AGG 0.732780 7_4:+47393860 Msa1158180:CDS
TTGCACGCCTTAGATCACGG+TGG 0.804209 7_4:-47394435 None:intergenic
TCTTTGAGACTTGAACAACG+AGG 0.832544 7_4:-47394591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAACGATATTTTTT+TGG - chr7_4:47392502-47392521 None:intergenic 10.0%
!! TATAATTAGCAAATATTATT+TGG - chr7_4:47394877-47394896 None:intergenic 10.0%
!!! AATTCTTTGGTTTATTATAT+AGG + chr7_4:47392008-47392027 Msa1158180:intron 15.0%
!! TAAAATTATAAGTCATTCAT+TGG - chr7_4:47392164-47392183 None:intergenic 15.0%
!! TAAAATATCAAACTTGAATA+TGG + chr7_4:47392529-47392548 Msa1158180:intron 15.0%
!!! TTTTGTAACTAACTAAAATT+AGG + chr7_4:47393151-47393170 Msa1158180:intron 15.0%
!! TTTGGATAAACAATTTAATT+AGG + chr7_4:47393236-47393255 Msa1158180:intron 15.0%
!! GATTATATTAACCATTTAAA+TGG + chr7_4:47393566-47393585 Msa1158180:intron 15.0%
!!! TTTTTGCTTATAATAAAAAC+CGG + chr7_4:47394114-47394133 Msa1158180:intron 15.0%
!! TAAACTCATATATTAACTAG+TGG + chr7_4:47391914-47391933 Msa1158180:intron 20.0%
!! TGGTTTATTATATAGGTAAA+TGG + chr7_4:47392015-47392034 Msa1158180:intron 20.0%
!! GGTTTATTATATAGGTAAAT+GGG + chr7_4:47392016-47392035 Msa1158180:intron 20.0%
!!! AGTCTTTTAGATTCATATAT+TGG + chr7_4:47392373-47392392 Msa1158180:intron 20.0%
!!! TAATTTGTTTAATCAGTTCA+TGG - chr7_4:47392660-47392679 None:intergenic 20.0%
!! GATAGATATTCAATTCTATT+TGG + chr7_4:47393218-47393237 Msa1158180:intron 20.0%
!! ATTTAATTAGGCACTTATAA+CGG + chr7_4:47393248-47393267 Msa1158180:intron 20.0%
!!! GCATATTTTTATTTTAGAGT+AGG + chr7_4:47393464-47393483 Msa1158180:intron 20.0%
!! TATGTATAAACTTAATGTTG+TGG - chr7_4:47394254-47394273 None:intergenic 20.0%
!! TTTCTAACATATTAAGACAT+TGG + chr7_4:47394338-47394357 Msa1158180:intron 20.0%
! AGTAAGATGATATTCATGAT+TGG + chr7_4:47391585-47391604 Msa1158180:five_prime_UTR 25.0%
!! TAGCATTTTCATTCAATGAA+TGG - chr7_4:47391648-47391667 None:intergenic 25.0%
! TATAAAGTGTAGTAAGATGT+GGG - chr7_4:47391728-47391747 None:intergenic 25.0%
! ATTATATAGGTAAATGGGAA+AGG + chr7_4:47392021-47392040 Msa1158180:intron 25.0%
!!! TCTGAAGTTTTTCTAGAAAA+GGG - chr7_4:47392090-47392109 None:intergenic 25.0%
!!! ATCTGAAGTTTTTCTAGAAA+AGG - chr7_4:47392091-47392110 None:intergenic 25.0%
! TAAAAAATCCATGTTAGACT+TGG - chr7_4:47392248-47392267 None:intergenic 25.0%
! GACTCATTCTATAAGTAAAA+TGG - chr7_4:47392357-47392376 None:intergenic 25.0%
! TATCATATCACATTAGTGTT+AGG + chr7_4:47392411-47392430 Msa1158180:intron 25.0%
! AAAATTAAGGTAGCCATAAA+CGG + chr7_4:47392784-47392803 Msa1158180:CDS 25.0%
!!! ATTCATTGATTTTGTTGCAA+TGG + chr7_4:47393062-47393081 Msa1158180:intron 25.0%
!! GACAAATATTTTTCTGTATG+CGG - chr7_4:47393545-47393564 None:intergenic 25.0%
! GCATACAGAAAAATATTTGT+CGG + chr7_4:47393544-47393563 Msa1158180:intron 25.0%
! ATAACTGAGATCCATTTAAA+TGG - chr7_4:47393580-47393599 None:intergenic 25.0%
! ACAATATTAATGTATGCCTA+AGG - chr7_4:47393734-47393753 None:intergenic 25.0%
!! CACGTATTTGTTAGAAAATA+TGG - chr7_4:47394090-47394109 None:intergenic 25.0%
!! AGAAGTGTACAAAATTACAA+TGG - chr7_4:47394919-47394938 None:intergenic 25.0%
!! CTATTTCTCAATACAAGTTT+CGG - chr7_4:47394964-47394983 None:intergenic 25.0%
! AAAGAATTTATTGCACAATG+AGG - chr7_4:47395008-47395027 None:intergenic 25.0%
! AGTCTCACATTTATATTTCA+AGG - chr7_4:47395033-47395052 None:intergenic 25.0%
! TGAAATATAAATGTGAGACT+AGG + chr7_4:47395033-47395052 Msa1158180:three_prime_UTR 25.0%
TCCAAAATCTAATCCTTACT+TGG + chr7_4:47391668-47391687 Msa1158180:five_prime_UTR 30.0%
! ACCAAGTAAGGATTAGATTT+TGG - chr7_4:47391672-47391691 None:intergenic 30.0%
AAATCTAATCCTTACTTGGT+TGG + chr7_4:47391672-47391691 Msa1158180:five_prime_UTR 30.0%
AATCTAATCCTTACTTGGTT+GGG + chr7_4:47391673-47391692 Msa1158180:five_prime_UTR 30.0%
CTATAAAGTGTAGTAAGATG+TGG - chr7_4:47391729-47391748 None:intergenic 30.0%
TACAATTTCTTCTTCCTTGT+AGG + chr7_4:47391807-47391826 Msa1158180:five_prime_UTR 30.0%
ATGTTGTAGCAATAAAGCTA+GGG + chr7_4:47391941-47391960 Msa1158180:intron 30.0%
!! AAAAACTTACTGCATTGGTT+TGG - chr7_4:47392137-47392156 None:intergenic 30.0%
GAGATAAAAACTTACTGCAT+TGG - chr7_4:47392142-47392161 None:intergenic 30.0%
ATAATCAACCAAGTCTAACA+TGG + chr7_4:47392237-47392256 Msa1158180:intron 30.0%
!! ACATTTTGATCTTGATCGAA+AGG - chr7_4:47392479-47392498 None:intergenic 30.0%
! ACCATCTAGTGTGTATTTTT+GGG - chr7_4:47392635-47392654 None:intergenic 30.0%
! AACCATCTAGTGTGTATTTT+TGG - chr7_4:47392636-47392655 None:intergenic 30.0%
CAAACATGTAGAAAGATTGA+TGG - chr7_4:47392708-47392727 None:intergenic 30.0%
CTACATGTTTGTACATTTGA+AGG + chr7_4:47392717-47392736 Msa1158180:intron 30.0%
ATGTTTGTACATTTGAAGGT+TGG + chr7_4:47392721-47392740 Msa1158180:intron 30.0%
! TGTAGTGGAAGCAAAAATTA+AGG + chr7_4:47392771-47392790 Msa1158180:CDS 30.0%
GCAACAAAATCAATGAATGA+AGG - chr7_4:47393060-47393079 None:intergenic 30.0%
! AAGATTGTTATTGCTATTGC+AGG + chr7_4:47393804-47393823 Msa1158180:intron 30.0%
! AGATTGTTATTGCTATTGCA+GGG + chr7_4:47393805-47393824 Msa1158180:intron 30.0%
TGTTAGAAAATATGGCGATA+AGG - chr7_4:47394082-47394101 None:intergenic 30.0%
ATATTAAGACATTGGATCAC+AGG + chr7_4:47394346-47394365 Msa1158180:intron 30.0%
! TTGCTTGGTATGATAATGAA+TGG + chr7_4:47394791-47394810 Msa1158180:CDS 30.0%
! TGCTTGGTATGATAATGAAT+GGG + chr7_4:47394792-47394811 Msa1158180:CDS 30.0%
TACAAAATTACAATGGCACA+TGG - chr7_4:47394912-47394931 None:intergenic 30.0%
TCCAATCCACATATAGATTT+GGG - chr7_4:47395061-47395080 None:intergenic 30.0%
TTAATAGTGTGTTTCTCCTA+AGG + chr7_4:47395089-47395108 Msa1158180:three_prime_UTR 30.0%
AACCATGAATGATTAACCTT+AGG - chr7_4:47395108-47395127 None:intergenic 30.0%
TATGTTGAACCTTAAGAGCT+GGG - chr7_4:47391869-47391888 None:intergenic 35.0%
ATATGTTGAACCTTAAGAGC+TGG - chr7_4:47391870-47391889 None:intergenic 35.0%
!! CTAGCTTTATTGCTACAACA+TGG - chr7_4:47391942-47391961 None:intergenic 35.0%
CATGTTGTAGCAATAAAGCT+AGG + chr7_4:47391940-47391959 Msa1158180:intron 35.0%
! AAAGGCTTTTCTGAATTCTC+TGG + chr7_4:47392039-47392058 Msa1158180:CDS 35.0%
GAAGATATCCTGATGAGTTA+CGG - chr7_4:47392068-47392087 None:intergenic 35.0%
TGCACACTTAATGACTTCTA+TGG + chr7_4:47392270-47392289 Msa1158180:intron 35.0%
AAAATATCAACTCGAGACGT+AGG + chr7_4:47392450-47392469 Msa1158180:intron 35.0%
!!! TAGTGTGTATTTTTGGGATC+CGG - chr7_4:47392629-47392648 None:intergenic 35.0%
TCCCAAAAATACACACTAGA+TGG + chr7_4:47392631-47392650 Msa1158180:intron 35.0%
AATCCTTCCAAATCCGTTTA+TGG - chr7_4:47392800-47392819 None:intergenic 35.0%
! ATAAACGGATTTGGAAGGAT+TGG + chr7_4:47392799-47392818 Msa1158180:CDS 35.0%
GTGTAGAATCATACTTGAGA+AGG - chr7_4:47392918-47392937 None:intergenic 35.0%
CTCAAGTATGATTCTACACT+TGG + chr7_4:47392919-47392938 Msa1158180:CDS 35.0%
TTTGTTGCAATGGAATTGTG+TGG + chr7_4:47393072-47393091 Msa1158180:intron 35.0%
ATAGAAATCGTCTATCGTCA+TGG + chr7_4:47393183-47393202 Msa1158180:intron 35.0%
!! GGAATAGATTTGGTGATTGA+AGG + chr7_4:47393833-47393852 Msa1158180:CDS 35.0%
AAGGTCCTTGATCAGAAATT+CGG + chr7_4:47394049-47394068 Msa1158180:CDS 35.0%
CATTACCGAATTTCTGATCA+AGG - chr7_4:47394057-47394076 None:intergenic 35.0%
! ATTTGCTGAAGAAGTGAATG+AGG + chr7_4:47394618-47394637 Msa1158180:CDS 35.0%
CTAAAATCTACAGACACAAG+TGG - chr7_4:47394700-47394719 None:intergenic 35.0%
! CACTTGTGTCTGTAGATTTT+AGG + chr7_4:47394698-47394717 Msa1158180:CDS 35.0%
CATTGTCAATGACGAATCAA+CGG - chr7_4:47394743-47394762 None:intergenic 35.0%
! GCTTGGTATGATAATGAATG+GGG + chr7_4:47394793-47394812 Msa1158180:CDS 35.0%
CAATCCACATATAGATTTGG+GGG - chr7_4:47395059-47395078 None:intergenic 35.0%
CCAATCCACATATAGATTTG+GGG - chr7_4:47395060-47395079 None:intergenic 35.0%
CTCCAATCCACATATAGATT+TGG - chr7_4:47395062-47395081 None:intergenic 35.0%
CTCCTAAGGTTAATCATTCA+TGG + chr7_4:47395103-47395122 Msa1158180:three_prime_UTR 35.0%
TATAATTCCTCTTGAGCATG+AGG + chr7_4:47395153-47395172 Msa1158180:three_prime_UTR 35.0%
CTTCCTTGTAGGCTTAATCA+TGG + chr7_4:47391818-47391837 Msa1158180:exon 40.0%
AAGCCATGATTAAGCCTACA+AGG - chr7_4:47391824-47391843 None:intergenic 40.0%
TGTAGGCTTAATCATGGCTT+CGG + chr7_4:47391824-47391843 Msa1158180:exon 40.0%
!! ACTTACTGCATTGGTTTGGA+AGG - chr7_4:47392133-47392152 None:intergenic 40.0%
! AAGGTAGCCATAAACGGATT+TGG + chr7_4:47392790-47392809 Msa1158180:CDS 40.0%
! TAGCCATAAACGGATTTGGA+AGG + chr7_4:47392794-47392813 Msa1158180:CDS 40.0%
GAAGGAACTTCTTGAGATGT+TGG + chr7_4:47392821-47392840 Msa1158180:CDS 40.0%
AACTTCTTGAGATGTTGGCA+TGG + chr7_4:47392826-47392845 Msa1158180:CDS 40.0%
! TTGATGGCAATGACATCAAG+AGG - chr7_4:47392865-47392884 None:intergenic 40.0%
ATCATACTTGAGAAGGTGAG+AGG - chr7_4:47392911-47392930 None:intergenic 40.0%
GATGCTGATGTTAAACCTGT+TGG + chr7_4:47392949-47392968 Msa1158180:CDS 40.0%
ACTGATGGTATCTCTGTTGA+TGG + chr7_4:47392973-47392992 Msa1158180:CDS 40.0%
! TGGTATCTCTGTTGATGGAA+AGG + chr7_4:47392978-47392997 Msa1158180:CDS 40.0%
! TTATTGCTATTGCAGGGAGT+TGG + chr7_4:47393811-47393830 Msa1158180:intron 40.0%
! TATTGCTATTGCAGGGAGTT+GGG + chr7_4:47393812-47393831 Msa1158180:intron 40.0%
!! GATTTGGTGATTGAAGGAAC+TGG + chr7_4:47393839-47393858 Msa1158180:CDS 40.0%
TGATCAAGGACCTTGACAAA+GGG - chr7_4:47394043-47394062 None:intergenic 40.0%
TTGGATCACAGGTATCATCA+AGG + chr7_4:47394357-47394376 Msa1158180:intron 40.0%
TGGATCACAGGTATCATCAA+GGG + chr7_4:47394358-47394377 Msa1158180:intron 40.0%
AACATTGTGCCAACTTCAAC+CGG + chr7_4:47394472-47394491 Msa1158180:CDS 40.0%
!! TCTTTGAGACTTGAACAACG+AGG - chr7_4:47394594-47394613 None:intergenic 40.0%
!! CGTTGATTCGTCATTGACAA+TGG + chr7_4:47394741-47394760 Msa1158180:CDS 40.0%
TTCGTCATTGACAATGGTCA+TGG + chr7_4:47394747-47394766 Msa1158180:CDS 40.0%
TCGTCATTGACAATGGTCAT+GGG + chr7_4:47394748-47394767 Msa1158180:CDS 40.0%
ATGAATGGGGTTACTCACAA+AGG + chr7_4:47394806-47394825 Msa1158180:CDS 40.0%
TGAATGGGGTTACTCACAAA+GGG + chr7_4:47394807-47394826 Msa1158180:CDS 40.0%
! CTCACAAAGGGTTGTTGATT+TGG + chr7_4:47394819-47394838 Msa1158180:CDS 40.0%
CTGACATTGTTGCCAATAAC+TGG + chr7_4:47394842-47394861 Msa1158180:CDS 40.0%
GAGGAGCAAGAGAAAATTGA+TGG - chr7_4:47394989-47395008 None:intergenic 40.0%
CCCCAAATCTATATGTGGAT+TGG + chr7_4:47395057-47395076 Msa1158180:three_prime_UTR 40.0%
TTATAGTCCTCATGCTCAAG+AGG - chr7_4:47395163-47395182 None:intergenic 40.0%
CTCATGAACCCAACCAAGTA+AGG - chr7_4:47391684-47391703 None:intergenic 45.0%
TGTAGTAAGATGTGGGTACG+TGG - chr7_4:47391721-47391740 None:intergenic 45.0%
TTGAACCTTAAGAGCTGGGT+TGG - chr7_4:47391865-47391884 None:intergenic 45.0%
ATATCAACTCGAGACGTAGG+TGG + chr7_4:47392453-47392472 Msa1158180:intron 45.0%
ATTCTCCGCATTCATGCAAC+GGG - chr7_4:47392589-47392608 None:intergenic 45.0%
GATTCTCCGCATTCATGCAA+CGG - chr7_4:47392590-47392609 None:intergenic 45.0%
CATTTGAAGGTTGGAAGCAG+TGG + chr7_4:47392730-47392749 Msa1158180:intron 45.0%
!! ATCCAGGAAAGGTGTTGTAG+TGG + chr7_4:47392756-47392775 Msa1158180:CDS 45.0%
TTCCACTACAACACCTTTCC+TGG - chr7_4:47392761-47392780 None:intergenic 45.0%
ACGGATTTGGAAGGATTGGA+AGG + chr7_4:47392803-47392822 Msa1158180:CDS 45.0%
GTCATTGCCATCAATGACAC+CGG + chr7_4:47392871-47392890 Msa1158180:CDS 45.0%
! GTTAAACCTGTTGGCACTGA+TGG + chr7_4:47392958-47392977 Msa1158180:CDS 45.0%
!! TGGAATTGTGTGGTCTTGTG+TGG + chr7_4:47393082-47393101 Msa1158180:intron 45.0%
CAGGGAGTTGGGAATAGATT+TGG + chr7_4:47393823-47393842 Msa1158180:intron 45.0%
! TGAAGGAACTGGAGTGTTTG+TGG + chr7_4:47393850-47393869 Msa1158180:CDS 45.0%
CATTACAGCAGGAGCTAAGA+AGG + chr7_4:47393895-47393914 Msa1158180:CDS 45.0%
! AGTTGGGATGTCTCCTTTTC+CGG - chr7_4:47393936-47393955 None:intergenic 45.0%
TGACACCAACCACGTAAGTT+GGG - chr7_4:47393952-47393971 None:intergenic 45.0%
TTGACACCAACCACGTAAGT+TGG - chr7_4:47393953-47393972 None:intergenic 45.0%
TGCTGATGATATCATCAGCG+TGG - chr7_4:47393991-47394010 None:intergenic 45.0%
CTGATCAAGGACCTTGACAA+AGG - chr7_4:47394044-47394063 None:intergenic 45.0%
ATCAAGAAGCCTTTGGTCAC+CGG - chr7_4:47394410-47394429 None:intergenic 45.0%
! TTTGAGTGATGGGAGGACAA+GGG - chr7_4:47394515-47394534 None:intergenic 45.0%
TGAGCTTGCCTTTGAGTGAT+GGG - chr7_4:47394525-47394544 None:intergenic 45.0%
TTGAGCTTGCCTTTGAGTGA+TGG - chr7_4:47394526-47394545 None:intergenic 45.0%
TCACTCAAAGGCAAGCTCAA+CGG + chr7_4:47394526-47394545 Msa1158180:CDS 45.0%
CAATGACGAATCAACGGTTG+AGG - chr7_4:47394737-47394756 None:intergenic 45.0%
AATGGTCATGGGAGATGACA+TGG + chr7_4:47394759-47394778 Msa1158180:CDS 45.0%
ACATGGTGAAGGTGATTGCT+TGG + chr7_4:47394776-47394795 Msa1158180:CDS 45.0%
TGGCTCTCACTTCCAGTTAT+TGG - chr7_4:47394857-47394876 None:intergenic 45.0%
TAGGCCCCCAAATCTATATG+TGG + chr7_4:47395052-47395071 Msa1158180:three_prime_UTR 45.0%
!!! TTTTTTTTTTTTTAATTCTT+TGG + chr7_4:47391995-47392014 Msa1158180:intron 5.0%
TGTAGCCAACCCAGCTCTTA+AGG + chr7_4:47391857-47391876 Msa1158180:CDS 50.0%
TCTGGTCTCCGTAACTCATC+AGG + chr7_4:47392057-47392076 Msa1158180:CDS 50.0%
TCATGCAACGGGGACTTAAG+TGG - chr7_4:47392578-47392597 None:intergenic 50.0%
AAGTCCCCGTTGCATGAATG+CGG + chr7_4:47392581-47392600 Msa1158180:intron 50.0%
TTCTCCGCATTCATGCAACG+GGG - chr7_4:47392588-47392607 None:intergenic 50.0%
TTGGAAGCAGTGGAAGATCC+AGG + chr7_4:47392740-47392759 Msa1158180:CDS 50.0%
AGCAGTGGAAGATCCAGGAA+AGG + chr7_4:47392745-47392764 Msa1158180:CDS 50.0%
GAGATGTTGGCATGGTCGTA+AGG + chr7_4:47392834-47392853 Msa1158180:CDS 50.0%
ATTGCCATCAATGACACCGG+AGG + chr7_4:47392874-47392893 Msa1158180:CDS 50.0%
!! TACACCTCCGGTGTCATTGA+TGG - chr7_4:47392881-47392900 None:intergenic 50.0%
! AGAGGCTTGCTTTACACCTC+CGG - chr7_4:47392893-47392912 None:intergenic 50.0%
GAGATACCATCAGTGCCAAC+AGG - chr7_4:47392967-47392986 None:intergenic 50.0%
AAGGAAGGTTGGCAGGGTTA+CGG - chr7_4:47393023-47393042 None:intergenic 50.0%
TAACCCTGCCAACCTTCCTT+GGG + chr7_4:47393023-47393042 Msa1158180:CDS 50.0%
!! CGCAGTATCGCATTAGCCTT+AGG + chr7_4:47393715-47393734 Msa1158180:intron 50.0%
! GGAGTGTTTGTGGACAGAGA+AGG + chr7_4:47393860-47393879 Msa1158180:CDS 50.0%
! TTTGTGGACAGAGAAGGTGC+TGG + chr7_4:47393866-47393885 Msa1158180:CDS 50.0%
!! TTGTGGACAGAGAAGGTGCT+GGG + chr7_4:47393867-47393886 Msa1158180:CDS 50.0%
! TTGGGATGTCTCCTTTTCCG+GGG - chr7_4:47393934-47393953 None:intergenic 50.0%
! GTTGGGATGTCTCCTTTTCC+GGG - chr7_4:47393935-47393954 None:intergenic 50.0%
AGGAGACATCCCAACTTACG+TGG + chr7_4:47393940-47393959 Msa1158180:CDS 50.0%
GACATCCCAACTTACGTGGT+TGG + chr7_4:47393944-47393963 Msa1158180:CDS 50.0%
!! GTGGTTGGTGTCAATGCTGA+TGG + chr7_4:47393959-47393978 Msa1158180:CDS 50.0%
AAAGGGAGCAAGGCAGTTAG+TGG - chr7_4:47394026-47394045 None:intergenic 50.0%
GTAGGAGTGAGTGGTAGTCA+TGG - chr7_4:47394386-47394405 None:intergenic 50.0%
ACTACCACTCACTCCTACAC+CGG + chr7_4:47394388-47394407 Msa1158180:CDS 50.0%
GGCTAGCATCAAGAAGCCTT+TGG - chr7_4:47394417-47394436 None:intergenic 50.0%
ATGCTAGCCACCGTGATCTA+AGG + chr7_4:47394428-47394447 Msa1158180:CDS 50.0%
CTCTTGCACGCCTTAGATCA+CGG - chr7_4:47394441-47394460 None:intergenic 50.0%
TTTGCTGCTCCGGTTGAAGT+TGG - chr7_4:47394484-47394503 None:intergenic 50.0%
AACTTCAACCGGAGCAGCAA+AGG + chr7_4:47394483-47394502 Msa1158180:CDS 50.0%
! CTTTGAGTGATGGGAGGACA+AGG - chr7_4:47394516-47394535 None:intergenic 50.0%
CTTGTCCTCCCATCACTCAA+AGG + chr7_4:47394514-47394533 Msa1158180:CDS 50.0%
TGTGCCAACACCAAACGTCT+CGG + chr7_4:47394561-47394580 Msa1158180:CDS 50.0%
!! ACAACCGAGACGTTTGGTGT+TGG - chr7_4:47394568-47394587 None:intergenic 50.0%
AGGTCAACAACCGAGACGTT+TGG - chr7_4:47394574-47394593 None:intergenic 50.0%
TTTCAGAGACAGTGCAGCCA+AGG + chr7_4:47394642-47394661 Msa1158180:CDS 50.0%
CATGGGAGATGACATGGTGA+AGG + chr7_4:47394765-47394784 Msa1158180:CDS 50.0%
GATGTGGGTACGTGGATGTG+TGG - chr7_4:47391713-47391732 None:intergenic 55.0%
TGCGGAGAATCCCTGACTAC+AGG + chr7_4:47392599-47392618 Msa1158180:intron 55.0%
GCGGAGAATCCCTGACTACA+GGG + chr7_4:47392600-47392619 Msa1158180:intron 55.0%
ATCCCTGACTACAGGGTAGC+CGG + chr7_4:47392607-47392626 Msa1158180:intron 55.0%
ATCCGGCTACCCTGTAGTCA+GGG - chr7_4:47392612-47392631 None:intergenic 55.0%
GTAACCCTGCCAACCTTCCT+TGG + chr7_4:47393022-47393041 Msa1158180:CDS 55.0%
AACCCTGCCAACCTTCCTTG+GGG + chr7_4:47393024-47393043 Msa1158180:CDS 55.0%
AGCTTACCCCCAAGGAAGGT+TGG - chr7_4:47393034-47393053 None:intergenic 55.0%
GAAGAGCTTACCCCCAAGGA+AGG - chr7_4:47393038-47393057 None:intergenic 55.0%
GAAGGAAGAGCTTACCCCCA+AGG - chr7_4:47393042-47393061 None:intergenic 55.0%
! GCTGGGAAGCACATTACAGC+AGG + chr7_4:47393884-47393903 Msa1158180:CDS 55.0%
! AAGGTACTCATCACAGCCCC+CGG + chr7_4:47393914-47393933 Msa1158180:CDS 55.0%
! TGGGATGTCTCCTTTTCCGG+GGG - chr7_4:47393933-47393952 None:intergenic 55.0%
CTGCCTTGCTCCCTTTGTCA+AGG + chr7_4:47394030-47394049 Msa1158180:CDS 55.0%
GGACCTTGACAAAGGGAGCA+AGG - chr7_4:47394036-47394055 None:intergenic 55.0%
CGACGCTATGCTACACTCTC+CGG - chr7_4:47394136-47394155 None:intergenic 55.0%
ACTCCTACACCGGTGACCAA+AGG + chr7_4:47394398-47394417 Msa1158180:CDS 55.0%
AAGCCTTTGGTCACCGGTGT+AGG - chr7_4:47394404-47394423 None:intergenic 55.0%
TTGCACGCCTTAGATCACGG+TGG - chr7_4:47394438-47394457 None:intergenic 55.0%
! GCTTGCCTTTGAGTGATGGG+AGG - chr7_4:47394522-47394541 None:intergenic 55.0%
GAGAATACCGCTCAGCTCCT+TGG - chr7_4:47394662-47394681 None:intergenic 55.0%
GATCCGGCTACCCTGTAGTC+AGG - chr7_4:47392613-47392632 None:intergenic 60.0%
ACCCTGCCAACCTTCCTTGG+GGG + chr7_4:47393025-47393044 Msa1158180:CDS 60.0%
ACCCCCAAGGAAGGTTGGCA+GGG - chr7_4:47393029-47393048 None:intergenic 60.0%
TACCCCCAAGGAAGGTTGGC+AGG - chr7_4:47393030-47393049 None:intergenic 60.0%
CTCATCACAGCCCCCGGAAA+AGG + chr7_4:47393920-47393939 Msa1158180:CDS 60.0%
GTCACCGGTGTAGGAGTGAG+TGG - chr7_4:47394395-47394414 None:intergenic 60.0%
AACCGGAGCAGCAAAGGCAG+TGG + chr7_4:47394489-47394508 Msa1158180:CDS 60.0%
AGTGCAGCCAAGGAGCTGAG+CGG + chr7_4:47394652-47394671 Msa1158180:CDS 60.0%
GGCCACTGCCTTTGCTGCTC+CGG - chr7_4:47394494-47394513 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 47391566 47395194 47391566 ID=Msa1158180;Name=Msa1158180
chr7_4 mRNA 47391566 47395194 47391566 ID=Msa1158180-mRNA-1;Parent=Msa1158180;Name=Msa1158180-mRNA-1;_AED=0.02;_eAED=0.02;_QI=271|1|1|1|1|1|5|324|404
chr7_4 exon 47391566 47391878 47391566 ID=Msa1158180-mRNA-1:exon:12618;Parent=Msa1158180-mRNA-1
chr7_4 exon 47392030 47392146 47392030 ID=Msa1158180-mRNA-1:exon:12619;Parent=Msa1158180-mRNA-1
chr7_4 exon 47392739 47393046 47392739 ID=Msa1158180-mRNA-1:exon:12620;Parent=Msa1158180-mRNA-1
chr7_4 exon 47393826 47394070 47393826 ID=Msa1158180-mRNA-1:exon:12621;Parent=Msa1158180-mRNA-1
chr7_4 exon 47394368 47395194 47394368 ID=Msa1158180-mRNA-1:exon:12622;Parent=Msa1158180-mRNA-1
chr7_4 five_prime_UTR 47391566 47391836 47391566 ID=Msa1158180-mRNA-1:five_prime_utr;Parent=Msa1158180-mRNA-1
chr7_4 CDS 47391837 47391878 47391837 ID=Msa1158180-mRNA-1:cds;Parent=Msa1158180-mRNA-1
chr7_4 CDS 47392030 47392146 47392030 ID=Msa1158180-mRNA-1:cds;Parent=Msa1158180-mRNA-1
chr7_4 CDS 47392739 47393046 47392739 ID=Msa1158180-mRNA-1:cds;Parent=Msa1158180-mRNA-1
chr7_4 CDS 47393826 47394070 47393826 ID=Msa1158180-mRNA-1:cds;Parent=Msa1158180-mRNA-1
chr7_4 CDS 47394368 47394870 47394368 ID=Msa1158180-mRNA-1:cds;Parent=Msa1158180-mRNA-1
chr7_4 three_prime_UTR 47394871 47395194 47394871 ID=Msa1158180-mRNA-1:three_prime_utr;Parent=Msa1158180-mRNA-1
Gene Sequence

>Msa1158180

ATGGCTTCGGCTACTTTCTCTGTAGCCAACCCAGCTCTTAAGGTAAATGGGAAAGGCTTTTCTGAATTCTCTGGTCTCCGTAACTCATCAGGATATCTTCCCTTTTCTAGAAAAACTTCAGATGACTTTCATTCTGTCATTTCCTTCCAAACCAATGCAGTTGGAAGCAGTGGAAGATCCAGGAAAGGTGTTGTAGTGGAAGCAAAAATTAAGGTAGCCATAAACGGATTTGGAAGGATTGGAAGGAACTTCTTGAGATGTTGGCATGGTCGTAAGGACTCGCCTCTTGATGTCATTGCCATCAATGACACCGGAGGTGTAAAGCAAGCCTCTCACCTTCTCAAGTATGATTCTACACTTGGAATCTTTGATGCTGATGTTAAACCTGTTGGCACTGATGGTATCTCTGTTGATGGAAAGGTTATCAAAGTTGTCTCTGACCGTAACCCTGCCAACCTTCCTTGGGGGGAGTTGGGAATAGATTTGGTGATTGAAGGAACTGGAGTGTTTGTGGACAGAGAAGGTGCTGGGAAGCACATTACAGCAGGAGCTAAGAAGGTACTCATCACAGCCCCCGGAAAAGGAGACATCCCAACTTACGTGGTTGGTGTCAATGCTGATGGTTACAGCCACGCTGATGATATCATCAGCAACGCTTCTTGCACCACTAACTGCCTTGCTCCCTTTGTCAAGGTCCTTGATCAGAAATTCGGTATCATCAAGGGTACCATGACTACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCTAGCCACCGTGATCTAAGGCGTGCAAGAGCAGCAGCTCTTAACATTGTGCCAACTTCAACCGGAGCAGCAAAGGCAGTGGCCCTTGTCCTCCCATCACTCAAAGGCAAGCTCAACGGTATTGCACTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGACCTCGTTGTTCAAGTCTCAAAGAAGACATTTGCTGAAGAAGTGAATGAGGCTTTCAGAGACAGTGCAGCCAAGGAGCTGAGCGGTATTCTCTCAGTTTGTGATGAGCCACTTGTGTCTGTAGATTTTAGGTGCACTGATGTGTCCTCAACCGTTGATTCGTCATTGACAATGGTCATGGGAGATGACATGGTGAAGGTGATTGCTTGGTATGATAATGAATGGGGTTACTCACAAAGGGTTGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGA

Protein sequence

>Msa1158180

MASATFSVANPALKVNGKGFSEFSGLRNSSGYLPFSRKTSDDFHSVISFQTNAVGSSGRSRKGVVVEAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGKHITAGAKKVLITAPGKGDIPTYVVGVNADGYSHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRDSAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK*