Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799340 | sp|O23547|EXLB1_ARATH | 62.343 | 239 | 87 | 3 | 12 | 249 | 11 | 247 | 4.21e-111 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799340 | G7JYL2 | 96.429 | 252 | 9 | 0 | 1 | 252 | 1 | 252 | 0.0 | 508 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa0799340 | 0.805564 | 1.256352e-49 | -8.615850e-47 |
| Msa0030300 | Msa0799340 | 0.800261 | 1.565733e-48 | -8.615850e-47 |
| Msa0051630 | Msa0799340 | 0.815601 | 8.505495e-52 | -8.615850e-47 |
| Msa0051740 | Msa0799340 | 0.822467 | 2.332257e-53 | -8.615850e-47 |
| Msa0051750 | Msa0799340 | 0.810175 | 1.313730e-50 | -8.615850e-47 |
| Msa0071250 | Msa0799340 | 0.807088 | 5.995764e-50 | -8.615850e-47 |
| Msa0103790 | Msa0799340 | 0.813159 | 2.948018e-51 | -8.615850e-47 |
| Msa0105520 | Msa0799340 | 0.813456 | 2.536778e-51 | -8.615850e-47 |
| Msa0106620 | Msa0799340 | 0.808231 | 3.429142e-50 | -8.615850e-47 |
| Msa0106710 | Msa0799340 | 0.805700 | 1.175970e-49 | -8.615850e-47 |
| Msa0628420 | Msa0799340 | 0.802592 | 5.213923e-49 | -8.615850e-47 |
| Msa0640940 | Msa0799340 | 0.824684 | 7.063547e-54 | -8.615850e-47 |
| Msa0642970 | Msa0799340 | 0.814675 | 1.365046e-51 | -8.615850e-47 |
| Msa0643320 | Msa0799340 | 0.813085 | 3.059893e-51 | -8.615850e-47 |
| Msa0662630 | Msa0799340 | 0.800249 | 1.574868e-48 | -8.615850e-47 |
| Msa0679360 | Msa0799340 | 0.827739 | 1.324518e-54 | -8.615850e-47 |
| Msa0682680 | Msa0799340 | 0.811154 | 8.068422e-51 | -8.615850e-47 |
| Msa0709160 | Msa0799340 | 0.832916 | 7.192725e-56 | -8.615850e-47 |
| Msa0713340 | Msa0799340 | 0.991929 | 2.481497e-190 | -8.615850e-47 |
| Msa0750250 | Msa0799340 | 0.803571 | 3.271282e-49 | -8.615850e-47 |
| Msa0754930 | Msa0799340 | 0.992759 | 2.929998e-195 | -8.615850e-47 |
| Msa0763920 | Msa0799340 | 0.804144 | 2.486712e-49 | -8.615850e-47 |
| Msa0773590 | Msa0799340 | 0.806999 | 6.261674e-50 | -8.615850e-47 |
| Msa0799340 | Msa0800370 | 0.812578 | 3.950670e-51 | -8.615850e-47 |
| Msa0799340 | Msa0811040 | 0.815145 | 1.074055e-51 | -8.615850e-47 |
| Msa0799340 | Msa0826150 | 0.809011 | 2.336403e-50 | -8.615850e-47 |
| Msa0799340 | Msa0834330 | 0.986318 | 2.170430e-166 | -8.615850e-47 |
| Msa0799340 | Msa0844280 | 0.805264 | 1.451597e-49 | -8.615850e-47 |
| Msa0799340 | Msa0870650 | 0.819373 | 1.201635e-52 | -8.615850e-47 |
| Msa0799340 | Msa0903780 | 0.826679 | 2.375897e-54 | -8.615850e-47 |
| Msa0799340 | Msa0905750 | 0.841893 | 3.604453e-58 | -8.615850e-47 |
| Msa0799340 | Msa0934140 | 0.813153 | 2.955949e-51 | -8.615850e-47 |
| Msa0799340 | Msa0944200 | 0.803425 | 3.507016e-49 | -8.615850e-47 |
| Msa0799340 | Msa0947800 | 0.814280 | 1.669879e-51 | -8.615850e-47 |
| Msa0799340 | Msa0958030 | 0.823024 | 1.730241e-53 | -8.615850e-47 |
| Msa0799340 | Msa0974950 | 0.806523 | 7.894115e-50 | -8.615850e-47 |
| Msa0799340 | Msa0980540 | 0.805429 | 1.340853e-49 | -8.615850e-47 |
| Msa0799340 | Msa0992580 | 0.826161 | 3.158356e-54 | -8.615850e-47 |
| Msa0799340 | Msa1027250 | 0.805892 | 1.071885e-49 | -8.615850e-47 |
| Msa0799340 | Msa1027300 | 0.807875 | 4.081764e-50 | -8.615850e-47 |
| Msa0799340 | Msa1027360 | 0.809406 | 1.921870e-50 | -8.615850e-47 |
| Msa0799340 | Msa1042660 | 0.804036 | 2.619227e-49 | -8.615850e-47 |
| Msa0799340 | Msa1063420 | 0.806031 | 1.002082e-49 | -8.615850e-47 |
| Msa0799340 | Msa1093100 | 0.831496 | 1.615518e-55 | -8.615850e-47 |
| Msa0799340 | Msa1131490 | 0.814759 | 1.307920e-51 | -8.615850e-47 |
| Msa0799340 | Msa1178580 | 0.823278 | 1.509528e-53 | -8.615850e-47 |
| Msa0799340 | Msa1188560 | 0.813039 | 3.130813e-51 | -8.615850e-47 |
| Msa0799340 | Msa1205480 | 0.831980 | 1.226848e-55 | -8.615850e-47 |
| Msa0799340 | Msa1205590 | 0.850241 | 1.929025e-60 | -8.615850e-47 |
| Msa0799340 | Msa1206650 | 0.835427 | 1.688954e-56 | -8.615850e-47 |
| Msa0799340 | Msa1209670 | 0.835419 | 1.696403e-56 | -8.615850e-47 |
| Msa0799340 | Msa1233850 | 0.839825 | 1.256856e-57 | -8.615850e-47 |
| Msa0799340 | Msa1250110 | 0.804378 | 2.223434e-49 | -8.615850e-47 |
| Msa0799340 | Msa1250530 | 0.800662 | 1.297357e-48 | -8.615850e-47 |
| Msa0799340 | Msa1257070 | 0.810356 | 1.200723e-50 | -8.615850e-47 |
| Msa0799340 | Msa1264420 | 0.803830 | 2.890688e-49 | -8.615850e-47 |
| Msa0799340 | Msa1270660 | 0.807940 | 3.954847e-50 | -8.615850e-47 |
| Msa0799340 | Msa1276150 | 0.824918 | 6.219307e-54 | -8.615850e-47 |
| Msa0799340 | Msa1276970 | 0.806925 | 6.489995e-50 | -8.615850e-47 |
| Msa0799340 | Msa1293400 | 0.826316 | 2.899754e-54 | -8.615850e-47 |
| Msa0799340 | Msa1297530 | 0.822746 | 2.009085e-53 | -8.615850e-47 |
| Msa0799340 | Msa1307180 | 0.817629 | 2.986241e-52 | -8.615850e-47 |
| Msa0799340 | Msa1315750 | 0.809006 | 2.342217e-50 | -8.615850e-47 |
| Msa0799340 | Msa1316360 | 0.806895 | 6.588310e-50 | -8.615850e-47 |
| Msa0799340 | Msa1320820 | 0.817938 | 2.543504e-52 | -8.615850e-47 |
| Msa0799340 | Msa1323690 | 0.808773 | 2.627295e-50 | -8.615850e-47 |
| Msa0799340 | Msa1336560 | 0.812757 | 3.611194e-51 | -8.615850e-47 |
| Msa0799340 | Msa1337170 | 0.829563 | 4.799873e-55 | -8.615850e-47 |
| Msa0799340 | Msa1351540 | 0.801655 | 8.125576e-49 | -8.615850e-47 |
| Msa0799340 | Msa1356610 | 0.806959 | 6.383327e-50 | -8.615850e-47 |
| Msa0799340 | Msa1357190 | 0.800065 | 1.716047e-48 | -8.615850e-47 |
| Msa0799340 | Msa1362420 | 0.800114 | 1.677208e-48 | -8.615850e-47 |
| Msa0799340 | Msa1370590 | 0.827241 | 1.743785e-54 | -8.615850e-47 |
| Msa0799340 | Msa1384100 | 0.826261 | 2.988612e-54 | -8.615850e-47 |
| Msa0799340 | Msa1410420 | 0.805844 | 1.097171e-49 | -8.615850e-47 |
| Msa0799340 | Msa1416260 | 0.806518 | 7.913472e-50 | -8.615850e-47 |
| Msa0799340 | Msa1432480 | 0.807000 | 6.259147e-50 | -8.615850e-47 |
| Msa0799340 | Msa1442790 | 0.809759 | 1.614555e-50 | -8.615850e-47 |
| Msa0799340 | Msa1444120 | 0.826871 | 2.137914e-54 | -8.615850e-47 |
| Msa0799340 | Msa1451150 | 0.826247 | 3.012446e-54 | -8.615850e-47 |
| Msa0799340 | Msa1454530 | 0.803026 | 4.243321e-49 | -8.615850e-47 |
| Msa0799340 | Msa1454960 | 0.816637 | 4.990626e-52 | -8.615850e-47 |
| Msa0799340 | Msa1458610 | 0.801608 | 8.310962e-49 | -8.615850e-47 |
| Msa0799340 | Msa1459960 | 0.804226 | 2.391306e-49 | -8.615850e-47 |
| Msa0123510 | Msa0799340 | 0.811410 | 7.097976e-51 | -8.615850e-47 |
| Msa0126790 | Msa0799340 | 0.804146 | 2.485211e-49 | -8.615850e-47 |
| Msa0126880 | Msa0799340 | 0.801340 | 9.429375e-49 | -8.615850e-47 |
| Msa0136120 | Msa0799340 | 0.804056 | 2.594056e-49 | -8.615850e-47 |
| Msa0142500 | Msa0799340 | 0.809095 | 2.241707e-50 | -8.615850e-47 |
| Msa0146080 | Msa0799340 | 0.823223 | 1.555216e-53 | -8.615850e-47 |
| Msa0147980 | Msa0799340 | 0.806658 | 7.391057e-50 | -8.615850e-47 |
| Msa0171870 | Msa0799340 | 0.802897 | 4.511658e-49 | -8.615850e-47 |
| Msa0171980 | Msa0799340 | 0.818108 | 2.327952e-52 | -8.615850e-47 |
| Msa0190120 | Msa0799340 | 0.844207 | 8.720504e-59 | -8.615850e-47 |
| Msa0205010 | Msa0799340 | 0.803781 | 2.959441e-49 | -8.615850e-47 |
| Msa0207030 | Msa0799340 | 0.820574 | 6.383374e-53 | -8.615850e-47 |
| Msa0238030 | Msa0799340 | 0.803093 | 4.109361e-49 | -8.615850e-47 |
| Msa0390480 | Msa0799340 | 0.817535 | 3.135385e-52 | -8.615850e-47 |
| Msa0395980 | Msa0799340 | 0.806375 | 8.480117e-50 | -8.615850e-47 |
| Msa0403770 | Msa0799340 | 0.825680 | 4.106846e-54 | -8.615850e-47 |
| Msa0443430 | Msa0799340 | 0.814839 | 1.255579e-51 | -8.615850e-47 |
| Msa0482040 | Msa0799340 | 0.817223 | 3.686902e-52 | -8.615850e-47 |
| Msa0244970 | Msa0799340 | 0.829472 | 5.050022e-55 | -8.615850e-47 |
| Msa0244980 | Msa0799340 | 0.842533 | 2.440382e-58 | -8.615850e-47 |
| Msa0249580 | Msa0799340 | 0.806836 | 6.779171e-50 | -8.615850e-47 |
| Msa0271890 | Msa0799340 | 0.816376 | 5.710423e-52 | -8.615850e-47 |
| Msa0283420 | Msa0799340 | 0.840340 | 9.225041e-58 | -8.615850e-47 |
| Msa0285330 | Msa0799340 | 0.818252 | 2.159354e-52 | -8.615850e-47 |
| Msa0296790 | Msa0799340 | 0.807933 | 3.967496e-50 | -8.615850e-47 |
| Msa0304840 | Msa0799340 | 0.805203 | 1.495472e-49 | -8.615850e-47 |
| Msa0307960 | Msa0799340 | 0.804164 | 2.463731e-49 | -8.615850e-47 |
| Msa0310860 | Msa0799340 | 0.812886 | 3.383447e-51 | -8.615850e-47 |
| Msa0321690 | Msa0799340 | 0.836747 | 7.806133e-57 | -8.615850e-47 |
| Msa0322900 | Msa0799340 | 0.822163 | 2.743391e-53 | -8.615850e-47 |
| Msa0324240 | Msa0799340 | 0.802327 | 5.913419e-49 | -8.615850e-47 |
| Msa0363060 | Msa0799340 | 0.802382 | 5.761652e-49 | -8.615850e-47 |
| Msa0363640 | Msa0799340 | 0.800722 | 1.261380e-48 | -8.615850e-47 |
| Msa0482940 | Msa0799340 | 0.825934 | 3.575899e-54 | -8.615850e-47 |
| Msa0484740 | Msa0799340 | 0.800725 | 1.259514e-48 | -8.615850e-47 |
| Msa0489660 | Msa0799340 | 0.820114 | 8.139902e-53 | -8.615850e-47 |
| Msa0491000 | Msa0799340 | 0.812762 | 3.602029e-51 | -8.615850e-47 |
| Msa0511770 | Msa0799340 | 0.803036 | 4.221562e-49 | -8.615850e-47 |
| Msa0518170 | Msa0799340 | 0.822248 | 2.621515e-53 | -8.615850e-47 |
| Msa0531250 | Msa0799340 | 0.802888 | 4.530633e-49 | -8.615850e-47 |
| Msa0542290 | Msa0799340 | 0.814149 | 1.784991e-51 | -8.615850e-47 |
| Msa0547160 | Msa0799340 | 0.822419 | 2.392783e-53 | -8.615850e-47 |
| Msa0547990 | Msa0799340 | 0.805980 | 1.027378e-49 | -8.615850e-47 |
| Msa0566350 | Msa0799340 | 0.807711 | 4.422568e-50 | -8.615850e-47 |
| Msa0566750 | Msa0799340 | 0.808606 | 2.851400e-50 | -8.615850e-47 |
| Msa0600080 | Msa0799340 | 0.805785 | 1.128811e-49 | -8.615850e-47 |
| Msa0600450 | Msa0799340 | 0.821589 | 3.725554e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799340 | MtrunA17_Chr5g0399811 | 96.429 | 252 | 9 | 0 | 1 | 252 | 1 | 252 | 0.0 | 508 |
| Msa0799340 | MtrunA17_Chr4g0055561 | 74.502 | 251 | 64 | 0 | 2 | 252 | 1 | 251 | 8.86e-148 | 412 |
| Msa0799340 | MtrunA17_Chr4g0055601 | 61.200 | 250 | 96 | 1 | 2 | 250 | 1 | 250 | 2.15e-118 | 338 |
| Msa0799340 | MtrunA17_Chr4g0055061 | 40.239 | 251 | 142 | 2 | 10 | 252 | 3 | 253 | 2.18e-62 | 196 |
| Msa0799340 | MtrunA17_Chr4g0038741 | 40.724 | 221 | 127 | 3 | 32 | 251 | 26 | 243 | 5.30e-57 | 182 |
| Msa0799340 | MtrunA17_Chr7g0231211 | 32.046 | 259 | 155 | 7 | 10 | 251 | 16 | 270 | 2.90e-32 | 119 |
| Msa0799340 | MtrunA17_Chr4g0012801 | 30.736 | 231 | 150 | 7 | 26 | 251 | 39 | 264 | 1.40e-28 | 109 |
| Msa0799340 | MtrunA17_Chr4g0055581 | 54.255 | 94 | 42 | 1 | 95 | 187 | 13 | 106 | 1.70e-28 | 104 |
| Msa0799340 | MtrunA17_Chr2g0324201 | 30.837 | 227 | 142 | 7 | 34 | 252 | 38 | 257 | 1.88e-28 | 108 |
| Msa0799340 | MtrunA17_Chr7g0231221 | 33.921 | 227 | 137 | 8 | 34 | 251 | 53 | 275 | 3.81e-28 | 108 |
| Msa0799340 | MtrunA17_Chr2g0324221 | 30.088 | 226 | 143 | 7 | 34 | 251 | 40 | 258 | 1.89e-27 | 106 |
| Msa0799340 | MtrunA17_Chr4g0021641 | 30.531 | 226 | 142 | 7 | 34 | 251 | 46 | 264 | 4.60e-26 | 102 |
| Msa0799340 | MtrunA17_Chr1g0193631 | 28.326 | 233 | 146 | 9 | 32 | 251 | 33 | 257 | 2.51e-21 | 89.7 |
| Msa0799340 | MtrunA17_Chr4g0057091 | 25.769 | 260 | 166 | 9 | 12 | 252 | 11 | 262 | 3.64e-21 | 89.4 |
| Msa0799340 | MtrunA17_Chr7g0271001 | 26.437 | 261 | 160 | 12 | 12 | 251 | 5 | 254 | 3.70e-21 | 89.4 |
| Msa0799340 | MtrunA17_Chr3g0092071 | 28.099 | 242 | 158 | 9 | 18 | 251 | 14 | 247 | 6.85e-21 | 88.6 |
| Msa0799340 | MtrunA17_Chr7g0218751 | 27.755 | 245 | 162 | 10 | 15 | 251 | 14 | 251 | 1.23e-20 | 87.8 |
| Msa0799340 | MtrunA17_Chr7g0218741 | 27.236 | 246 | 164 | 8 | 15 | 251 | 14 | 253 | 6.77e-20 | 85.9 |
| Msa0799340 | MtrunA17_Chr8g0360041 | 27.778 | 252 | 166 | 10 | 9 | 251 | 10 | 254 | 1.14e-19 | 85.1 |
| Msa0799340 | MtrunA17_Chr3g0128791 | 27.928 | 222 | 145 | 8 | 32 | 245 | 34 | 248 | 1.34e-19 | 85.1 |
| Msa0799340 | MtrunA17_Chr3g0128801 | 25.781 | 256 | 175 | 8 | 1 | 248 | 3 | 251 | 1.47e-19 | 85.1 |
| Msa0799340 | MtrunA17_Chr5g0398271 | 25.847 | 236 | 148 | 6 | 32 | 252 | 40 | 263 | 2.30e-19 | 84.7 |
| Msa0799340 | MtrunA17_Chr7g0217661 | 28.696 | 230 | 150 | 10 | 26 | 252 | 23 | 241 | 1.99e-18 | 81.6 |
| Msa0799340 | MtrunA17_Chr5g0432611 | 27.928 | 222 | 145 | 8 | 33 | 246 | 33 | 247 | 7.72e-18 | 80.1 |
| Msa0799340 | MtrunA17_Chr3g0107291 | 24.900 | 249 | 163 | 9 | 15 | 246 | 15 | 256 | 1.27e-17 | 79.7 |
| Msa0799340 | MtrunA17_Chr3g0107311 | 24.603 | 252 | 166 | 9 | 12 | 246 | 6 | 250 | 1.91e-17 | 79.3 |
| Msa0799340 | MtrunA17_Chr4g0042521 | 26.446 | 242 | 163 | 8 | 12 | 245 | 8 | 242 | 6.97e-17 | 77.4 |
| Msa0799340 | MtrunA17_Chr5g0417701 | 26.860 | 242 | 159 | 9 | 15 | 245 | 8 | 242 | 1.19e-16 | 77.0 |
| Msa0799340 | MtrunA17_Chr8g0360721 | 26.457 | 223 | 133 | 10 | 45 | 251 | 14 | 221 | 2.22e-16 | 75.5 |
| Msa0799340 | MtrunA17_Chr7g0218761 | 28.972 | 214 | 135 | 10 | 47 | 251 | 7 | 212 | 2.55e-16 | 75.5 |
| Msa0799340 | MtrunA17_Chr4g0021561 | 27.309 | 249 | 162 | 10 | 12 | 248 | 13 | 254 | 5.64e-14 | 69.7 |
| Msa0799340 | MtrunA17_Chr1g0157061 | 23.276 | 232 | 159 | 10 | 31 | 251 | 18 | 241 | 3.78e-12 | 64.3 |
| Msa0799340 | MtrunA17_Chr5g0433841 | 26.809 | 235 | 145 | 11 | 32 | 252 | 44 | 265 | 5.50e-12 | 63.9 |
| Msa0799340 | MtrunA17_Chr6g0453341 | 27.803 | 223 | 148 | 9 | 29 | 248 | 38 | 250 | 5.93e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0799340 | AT4G17030.1 | 62.343 | 239 | 87 | 3 | 12 | 249 | 11 | 247 | 4.28e-112 | 322 |
| Msa0799340 | AT3G45970.2 | 39.130 | 207 | 123 | 3 | 48 | 251 | 15 | 221 | 1.73e-49 | 163 |
| Msa0799340 | AT4G38400.1 | 40.957 | 188 | 110 | 1 | 65 | 251 | 61 | 248 | 3.13e-47 | 158 |
| Msa0799340 | AT3G45970.1 | 38.424 | 203 | 122 | 3 | 52 | 251 | 46 | 248 | 1.04e-46 | 156 |
| Msa0799340 | AT3G45960.1 | 37.766 | 188 | 116 | 1 | 65 | 251 | 12 | 199 | 5.31e-46 | 153 |
| Msa0799340 | AT3G45960.2 | 36.634 | 202 | 126 | 2 | 52 | 251 | 46 | 247 | 7.96e-46 | 154 |
| Msa0799340 | AT1G65680.1 | 32.083 | 240 | 143 | 8 | 24 | 251 | 42 | 273 | 1.85e-32 | 120 |
| Msa0799340 | AT4G28250.1 | 30.153 | 262 | 164 | 9 | 6 | 252 | 4 | 261 | 1.93e-28 | 109 |
| Msa0799340 | AT2G20750.1 | 29.389 | 262 | 159 | 9 | 13 | 252 | 11 | 268 | 2.57e-26 | 103 |
| Msa0799340 | AT4G28250.2 | 29.008 | 262 | 161 | 10 | 6 | 252 | 4 | 255 | 1.64e-23 | 95.9 |
| Msa0799340 | AT2G40610.1 | 29.528 | 254 | 164 | 9 | 1 | 245 | 1 | 248 | 4.12e-23 | 94.7 |
| Msa0799340 | AT5G05290.1 | 29.279 | 222 | 143 | 7 | 33 | 246 | 36 | 251 | 1.08e-22 | 94.0 |
| Msa0799340 | AT3G60570.1 | 28.800 | 250 | 153 | 10 | 15 | 251 | 20 | 257 | 1.72e-21 | 90.9 |
| Msa0799340 | AT5G39290.1 | 29.915 | 234 | 135 | 11 | 32 | 251 | 61 | 279 | 3.86e-21 | 90.1 |
| Msa0799340 | AT5G39310.1 | 29.515 | 227 | 144 | 9 | 33 | 251 | 94 | 312 | 1.30e-20 | 89.4 |
| Msa0799340 | AT5G39270.1 | 29.915 | 234 | 135 | 11 | 32 | 251 | 61 | 279 | 4.90e-20 | 87.0 |
| Msa0799340 | AT2G45110.1 | 30.702 | 228 | 140 | 8 | 35 | 251 | 39 | 259 | 1.55e-19 | 85.5 |
| Msa0799340 | AT4G01630.1 | 23.282 | 262 | 182 | 8 | 2 | 251 | 1 | 255 | 1.73e-19 | 85.1 |
| Msa0799340 | AT3G60570.2 | 30.415 | 217 | 126 | 10 | 48 | 251 | 5 | 209 | 4.98e-19 | 83.2 |
| Msa0799340 | AT2G20750.2 | 31.122 | 196 | 112 | 7 | 13 | 187 | 11 | 204 | 1.43e-18 | 82.0 |
| Msa0799340 | AT5G56320.1 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 2.06e-18 | 82.4 |
| Msa0799340 | AT5G56320.2 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 2.06e-18 | 82.4 |
| Msa0799340 | AT5G39280.1 | 29.204 | 226 | 147 | 9 | 32 | 251 | 57 | 275 | 4.24e-18 | 81.6 |
| Msa0799340 | AT5G56320.3 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 5.41e-18 | 82.0 |
| Msa0799340 | AT5G39300.1 | 29.204 | 226 | 147 | 9 | 32 | 251 | 58 | 276 | 7.95e-18 | 80.9 |
| Msa0799340 | AT2G03090.1 | 25.911 | 247 | 168 | 8 | 10 | 248 | 11 | 250 | 1.13e-17 | 80.1 |
| Msa0799340 | AT1G65681.1 | 27.014 | 211 | 142 | 6 | 48 | 251 | 17 | 222 | 1.15e-17 | 79.7 |
| Msa0799340 | AT4G28250.4 | 30.457 | 197 | 115 | 7 | 6 | 188 | 4 | 192 | 1.36e-16 | 76.3 |
| Msa0799340 | AT3G15370.1 | 28.077 | 260 | 144 | 12 | 12 | 248 | 8 | 247 | 2.55e-16 | 76.6 |
| Msa0799340 | AT4G28250.3 | 30.612 | 196 | 114 | 7 | 6 | 187 | 4 | 191 | 3.16e-16 | 75.5 |
| Msa0799340 | AT5G02260.1 | 26.522 | 230 | 152 | 9 | 29 | 248 | 32 | 254 | 1.02e-15 | 74.7 |
| Msa0799340 | AT1G12560.1 | 23.246 | 228 | 161 | 6 | 32 | 251 | 40 | 261 | 6.04e-15 | 72.8 |
| Msa0799340 | AT2G39700.1 | 24.554 | 224 | 152 | 8 | 32 | 245 | 34 | 250 | 8.37e-15 | 72.4 |
| Msa0799340 | AT3G29030.1 | 27.807 | 187 | 127 | 6 | 29 | 213 | 38 | 218 | 1.16e-13 | 68.9 |
| Msa0799340 | AT2G37640.1 | 25.551 | 227 | 152 | 8 | 32 | 248 | 39 | 258 | 1.45e-13 | 68.9 |
| Msa0799340 | AT1G20190.1 | 24.569 | 232 | 153 | 10 | 33 | 251 | 30 | 252 | 5.40e-12 | 64.3 |
| Msa0799340 | AT4G38210.1 | 27.451 | 255 | 154 | 13 | 13 | 248 | 10 | 252 | 4.28e-11 | 62.0 |
| Msa0799340 | AT3G15370.2 | 26.364 | 220 | 125 | 10 | 48 | 248 | 76 | 277 | 7.61e-11 | 61.2 |
Find 72 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTTGGTGCTTAAAATT+AGG | 0.152890 | 5_3:+12514472 | None:intergenic |
| TCCCCGTGGCTATTCAAATT+TGG | 0.158342 | 5_3:-12513570 | Msa0799340:CDS |
| TGGCTATAATATCTTGTTTA+AGG | 0.174105 | 5_3:-12513465 | Msa0799340:CDS |
| AGAAATGCAAAGAATTATTT+AGG | 0.235172 | 5_3:+12514539 | None:intergenic |
| TGCTCTAGAGCAACCTATTA+TGG | 0.246885 | 5_3:-12514391 | Msa0799340:CDS |
| CTTGGATTTGCATAACAATC+TGG | 0.272291 | 5_3:+12514364 | None:intergenic |
| ACAATCTGGGCTACCATAAT+AGG | 0.288543 | 5_3:+12514378 | None:intergenic |
| GCTTGTGGCTATGGTGATTA+TGG | 0.309081 | 5_3:-12513957 | Msa0799340:CDS |
| TACGCATTGGCCTCCATTCT+TGG | 0.310288 | 5_3:+12513255 | None:intergenic |
| ATCTCTAGTGATTGGGAAGC+TGG | 0.319429 | 5_3:-12513122 | Msa0799340:CDS |
| TGACACAAACAAAACCAATT+TGG | 0.321541 | 5_3:+12514458 | None:intergenic |
| GTGGTAGTGCTGGGCTGTAT+TGG | 0.321854 | 5_3:-12513163 | Msa0799340:CDS |
| CCATTCTCGTCACACAATTC+TGG | 0.326522 | 5_3:+12513650 | None:intergenic |
| AAAGTACTTATAGATAGATT+TGG | 0.328977 | 5_3:-12513059 | Msa0799340:three_prime_UTR |
| TGGTAGTGCTGGGCTGTATT+GGG | 0.329472 | 5_3:-12513162 | Msa0799340:CDS |
| CCCCGTGGCTATTCAAATTT+GGG | 0.333249 | 5_3:-12513569 | Msa0799340:CDS |
| AGGCCAATGCGTAGGGCATT+TGG | 0.356145 | 5_3:-12513245 | Msa0799340:CDS |
| CCGATTTCGGTGTGGGAGAT+AGG | 0.376563 | 5_3:-12513610 | Msa0799340:CDS |
| CCTATCTCCCACACCGAAAT+CGG | 0.384864 | 5_3:+12513610 | None:intergenic |
| AGACTGTTATCTCTAGTGAT+TGG | 0.400920 | 5_3:-12513130 | Msa0799340:CDS |
| GCCATTCTTATTCTCTATGT+TGG | 0.402224 | 5_3:-12513410 | Msa0799340:CDS |
| CTCCAAGTGAGTGGTAGTGC+TGG | 0.409157 | 5_3:-12513173 | Msa0799340:CDS |
| TTAGAGGGAGCTTGTGGCTA+TGG | 0.433052 | 5_3:-12513966 | Msa0799340:intron |
| GACTGTTATCTCTAGTGATT+GGG | 0.436426 | 5_3:-12513129 | Msa0799340:CDS |
| CAATTTGTCATTGAACATGA+TGG | 0.445795 | 5_3:-12514497 | Msa0799340:exon |
| AACTTGATCTCACCTCTTGG+AGG | 0.448456 | 5_3:+12513200 | None:intergenic |
| AACAGGAAGATTGCCAAGAA+TGG | 0.466268 | 5_3:-12513268 | Msa0799340:intron |
| ATTCTTATTCTCTATGTTGG+TGG | 0.472042 | 5_3:-12513407 | Msa0799340:CDS |
| TCTCTAGTGATTGGGAAGCT+GGG | 0.472781 | 5_3:-12513121 | Msa0799340:CDS |
| TATGTGGTGGTGACCGATTT+CGG | 0.479504 | 5_3:-12513623 | Msa0799340:CDS |
| TCGCAGGCGTTTCTTCGCTA+TGG | 0.490569 | 5_3:-12513911 | Msa0799340:CDS |
| TCGCTATGGAAGAATGGATC+TGG | 0.490619 | 5_3:-12513897 | Msa0799340:CDS |
| CTCAACTTGATCTCACCTCT+TGG | 0.495730 | 5_3:+12513197 | None:intergenic |
| TTGGATTTGCATAACAATCT+GGG | 0.496289 | 5_3:+12514365 | None:intergenic |
| CCAGAATTGTGTGACGAGAA+TGG | 0.501363 | 5_3:-12513650 | Msa0799340:CDS |
| ATCACTAGAGATAACAGTCT+TGG | 0.514327 | 5_3:+12513133 | None:intergenic |
| CTCTAGTGATTGGGAAGCTG+GGG | 0.520412 | 5_3:-12513120 | Msa0799340:CDS |
| TTATAGCCATTGTATTTGCA+AGG | 0.532628 | 5_3:+12513479 | None:intergenic |
| GCCCAGCACTACCACTCACT+TGG | 0.534848 | 5_3:+12513171 | None:intergenic |
| ACTTGATCTCACCTCTTGGA+GGG | 0.535508 | 5_3:+12513201 | None:intergenic |
| ACCAACATAGAGAATAAGAA+TGG | 0.537864 | 5_3:+12513409 | None:intergenic |
| GCCCAAATTTGAATAGCCAC+GGG | 0.544992 | 5_3:+12513568 | None:intergenic |
| TGCCCAAATTTGAATAGCCA+CGG | 0.546821 | 5_3:+12513567 | None:intergenic |
| GTTCCAAATGCCCTACGCAT+TGG | 0.550110 | 5_3:+12513242 | None:intergenic |
| GTAAATGATGGCAATGTCGC+AGG | 0.552094 | 5_3:-12513927 | Msa0799340:CDS |
| TCCAAGTGAGTGGTAGTGCT+GGG | 0.552324 | 5_3:-12513172 | Msa0799340:CDS |
| GTTTCTTCGCTATGGAAGAA+TGG | 0.552967 | 5_3:-12513903 | Msa0799340:CDS |
| AAGAATGGAGGCCAATGCGT+AGG | 0.554025 | 5_3:-12513253 | Msa0799340:CDS |
| TGGAAGAATGGATCTGGTTG+TGG | 0.555017 | 5_3:-12513891 | Msa0799340:CDS |
| TCTTGAGAGGAACACAAGAC+AGG | 0.557963 | 5_3:+12514424 | None:intergenic |
| TATAGCCATTGTATTTGCAA+GGG | 0.561411 | 5_3:+12513480 | None:intergenic |
| GTGGTGACCGATTTCGGTGT+GGG | 0.566642 | 5_3:-12513617 | Msa0799340:CDS |
| AACTGCTGTTCAGTTGTGGC+AGG | 0.569473 | 5_3:-12513372 | Msa0799340:intron |
| ATAAGAATGGCTAAGTAGTG+AGG | 0.575706 | 5_3:+12513422 | None:intergenic |
| AGAATGGAGGCCAATGCGTA+GGG | 0.588746 | 5_3:-12513252 | Msa0799340:CDS |
| TATGGACAGACAGTAAATGA+TGG | 0.603311 | 5_3:-12513939 | Msa0799340:CDS |
| CAGAAGCCAAACACAAGTAG+AGG | 0.606030 | 5_3:+12512954 | None:intergenic |
| TAGTGCTGGGCTGTATTGGG+TGG | 0.610771 | 5_3:-12513159 | Msa0799340:CDS |
| AGGAAGATTGCCAAGAATGG+AGG | 0.614849 | 5_3:-12513265 | Msa0799340:CDS |
| TGACGAGAATGGAGCATATG+TGG | 0.619740 | 5_3:-12513639 | Msa0799340:CDS |
| AGAATCCCTTGCAAATACAA+TGG | 0.620915 | 5_3:-12513485 | Msa0799340:CDS |
| GCAAACAAAAGAGTCTTGAG+AGG | 0.624968 | 5_3:+12514411 | None:intergenic |
| TTTATAGAATGACACAGACC+AGG | 0.643770 | 5_3:+12513010 | None:intergenic |
| ATGTAACTGCTGTTCAGTTG+TGG | 0.651186 | 5_3:-12513376 | Msa0799340:CDS |
| GGTGGTGACCGATTTCGGTG+TGG | 0.653687 | 5_3:-12513618 | Msa0799340:CDS |
| AAGTTGAGGCTCCAAGTGAG+TGG | 0.655665 | 5_3:-12513182 | Msa0799340:CDS |
| GACTTCATCATGAGTCCCCG+TGG | 0.688519 | 5_3:-12513584 | Msa0799340:CDS |
| GATGCAGAGAACCCTCCAAG+AGG | 0.690257 | 5_3:-12513212 | Msa0799340:CDS |
| CCCAAATTTGAATAGCCACG+GGG | 0.693150 | 5_3:+12513569 | None:intergenic |
| CAAGAGGTGAGATCAAGTTG+AGG | 0.697595 | 5_3:-12513196 | Msa0799340:CDS |
| AAATTGTCAAAGCACAAACG+AGG | 0.702495 | 5_3:+12514514 | None:intergenic |
| CGAGAATGGAGCATATGTGG+TGG | 0.757236 | 5_3:-12513636 | Msa0799340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATAATGATGAAAT+AGG | - | chr5_3:12513851-12513870 | Msa0799340:intron | 10.0% |
| !! | ATAATAAATAATGATGAAAT+AGG | - | chr5_3:12513851-12513870 | Msa0799340:intron | 10.0% |
| !!! | ATTCAATTTTTATCTCAAAT+TGG | - | chr5_3:12513350-12513369 | Msa0799340:intron | 15.0% |
| !! | TATTAACAATCTCAAAATAA+AGG | + | chr5_3:12514196-12514215 | None:intergenic | 15.0% |
| !! | TAAAAATAACTATGAATAAG+AGG | + | chr5_3:12512961-12512980 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTTATCTCAAAT+TGG | - | chr5_3:12513350-12513369 | Msa0799340:intron | 15.0% |
| !! | TATTAACAATCTCAAAATAA+AGG | + | chr5_3:12514196-12514215 | None:intergenic | 15.0% |
| !! | AGAAATGCAAAGAATTATTT+AGG | + | chr5_3:12513002-12513021 | None:intergenic | 20.0% |
| !! | CACATTTATAAAAATTGACA+GGG | + | chr5_3:12513389-12513408 | None:intergenic | 20.0% |
| !! | ACACATTTATAAAAATTGAC+AGG | + | chr5_3:12513390-12513409 | None:intergenic | 20.0% |
| !! | TACATTTCTTGAAATTGAAT+TGG | - | chr5_3:12514226-12514245 | Msa0799340:intron | 20.0% |
| !! | ACATTTCTTGAAATTGAATT+GGG | - | chr5_3:12514227-12514246 | Msa0799340:intron | 20.0% |
| !!! | AAAGTACTTATAGATAGATT+TGG | - | chr5_3:12514479-12514498 | Msa0799340:CDS | 20.0% |
| !! | AGAAATGCAAAGAATTATTT+AGG | + | chr5_3:12513002-12513021 | None:intergenic | 20.0% |
| !! | CACATTTATAAAAATTGACA+GGG | + | chr5_3:12513389-12513408 | None:intergenic | 20.0% |
| !! | ACACATTTATAAAAATTGAC+AGG | + | chr5_3:12513390-12513409 | None:intergenic | 20.0% |
| !! | TACATTTCTTGAAATTGAAT+TGG | - | chr5_3:12514226-12514245 | Msa0799340:intron | 20.0% |
| !! | ACATTTCTTGAAATTGAATT+GGG | - | chr5_3:12514227-12514246 | Msa0799340:intron | 20.0% |
| !!! | AAAGTACTTATAGATAGATT+TGG | - | chr5_3:12514479-12514498 | Msa0799340:CDS | 20.0% |
| !! | CATTGAATCGGTTTATAAAT+CGG | + | chr5_3:12513457-12513476 | None:intergenic | 25.0% |
| !!! | CAGTATACAACATTTTTTTC+CGG | - | chr5_3:12513480-12513499 | Msa0799340:CDS | 25.0% |
| ! | CATAAAATACATAATCTGAG+TGG | - | chr5_3:12513536-12513555 | Msa0799340:CDS | 25.0% |
| !! | AACTAATTGTTAGTTGATGT+TGG | + | chr5_3:12513820-12513839 | None:intergenic | 25.0% |
| ! | AAATAATGATGAAATAGGTG+AGG | - | chr5_3:12513856-12513875 | Msa0799340:intron | 25.0% |
| ! | TATTCAAATTTGGGCAAAAA+TGG | - | chr5_3:12513978-12513997 | Msa0799340:intron | 25.0% |
| !! | TCTGCAGAACTTTTTAAATA+TGG | - | chr5_3:12514008-12514027 | Msa0799340:intron | 25.0% |
| !! | AGAACTTTTTAAATATGGTG+TGG | - | chr5_3:12514013-12514032 | Msa0799340:intron | 25.0% |
| !! | TGGCTATAATATCTTGTTTA+AGG | - | chr5_3:12514073-12514092 | Msa0799340:intron | 25.0% |
| !! | CATTGAATCGGTTTATAAAT+CGG | + | chr5_3:12513457-12513476 | None:intergenic | 25.0% |
| !!! | CAGTATACAACATTTTTTTC+CGG | - | chr5_3:12513480-12513499 | Msa0799340:CDS | 25.0% |
| ! | CATAAAATACATAATCTGAG+TGG | - | chr5_3:12513536-12513555 | Msa0799340:CDS | 25.0% |
| !! | AACTAATTGTTAGTTGATGT+TGG | + | chr5_3:12513820-12513839 | None:intergenic | 25.0% |
| ! | AAATAATGATGAAATAGGTG+AGG | - | chr5_3:12513856-12513875 | Msa0799340:intron | 25.0% |
| ! | TATTCAAATTTGGGCAAAAA+TGG | - | chr5_3:12513978-12513997 | Msa0799340:intron | 25.0% |
| !! | TCTGCAGAACTTTTTAAATA+TGG | - | chr5_3:12514008-12514027 | Msa0799340:intron | 25.0% |
| !! | AGAACTTTTTAAATATGGTG+TGG | - | chr5_3:12514013-12514032 | Msa0799340:intron | 25.0% |
| !! | TGGCTATAATATCTTGTTTA+AGG | - | chr5_3:12514073-12514092 | Msa0799340:intron | 25.0% |
| CAATTTGTCATTGAACATGA+TGG | - | chr5_3:12513041-12513060 | Msa0799340:three_prime_UTR | 30.0% | |
| !! | CCAATTTGGTGCTTAAAATT+AGG | + | chr5_3:12513069-12513088 | None:intergenic | 30.0% |
| ! | CCTAATTTTAAGCACCAAAT+TGG | - | chr5_3:12513066-12513085 | Msa0799340:three_prime_UTR | 30.0% |
| TGACACAAACAAAACCAATT+TGG | + | chr5_3:12513083-12513102 | None:intergenic | 30.0% | |
| TTGGATTTGCATAACAATCT+GGG | + | chr5_3:12513176-12513195 | None:intergenic | 30.0% | |
| ATTAGTAGAAGACACTTACT+TGG | + | chr5_3:12513195-12513214 | None:intergenic | 30.0% | |
| TGTATACTGTCTCATTGAAT+CGG | + | chr5_3:12513469-12513488 | None:intergenic | 30.0% | |
| ! | ACTTTTTAAATATGGTGTGG+TGG | - | chr5_3:12514016-12514035 | Msa0799340:intron | 30.0% |
| TATAGCCATTGTATTTGCAA+GGG | + | chr5_3:12514061-12514080 | None:intergenic | 30.0% | |
| TTATAGCCATTGTATTTGCA+AGG | + | chr5_3:12514062-12514081 | None:intergenic | 30.0% | |
| ACCAACATAGAGAATAAGAA+TGG | + | chr5_3:12514132-12514151 | None:intergenic | 30.0% | |
| ATTCTTATTCTCTATGTTGG+TGG | - | chr5_3:12514131-12514150 | Msa0799340:intron | 30.0% | |
| TGAATTGGGTTTACTTGAAA+TGG | - | chr5_3:12514241-12514260 | Msa0799340:intron | 30.0% | |
| CAATTTGTCATTGAACATGA+TGG | - | chr5_3:12513041-12513060 | Msa0799340:three_prime_UTR | 30.0% | |
| !! | CCAATTTGGTGCTTAAAATT+AGG | + | chr5_3:12513069-12513088 | None:intergenic | 30.0% |
| ! | CCTAATTTTAAGCACCAAAT+TGG | - | chr5_3:12513066-12513085 | Msa0799340:three_prime_UTR | 30.0% |
| TGACACAAACAAAACCAATT+TGG | + | chr5_3:12513083-12513102 | None:intergenic | 30.0% | |
| TTGGATTTGCATAACAATCT+GGG | + | chr5_3:12513176-12513195 | None:intergenic | 30.0% | |
| ATTAGTAGAAGACACTTACT+TGG | + | chr5_3:12513195-12513214 | None:intergenic | 30.0% | |
| TGTATACTGTCTCATTGAAT+CGG | + | chr5_3:12513469-12513488 | None:intergenic | 30.0% | |
| ! | ACTTTTTAAATATGGTGTGG+TGG | - | chr5_3:12514016-12514035 | Msa0799340:intron | 30.0% |
| TATAGCCATTGTATTTGCAA+GGG | + | chr5_3:12514061-12514080 | None:intergenic | 30.0% | |
| TTATAGCCATTGTATTTGCA+AGG | + | chr5_3:12514062-12514081 | None:intergenic | 30.0% | |
| ACCAACATAGAGAATAAGAA+TGG | + | chr5_3:12514132-12514151 | None:intergenic | 30.0% | |
| ATTCTTATTCTCTATGTTGG+TGG | - | chr5_3:12514131-12514150 | Msa0799340:intron | 30.0% | |
| TGAATTGGGTTTACTTGAAA+TGG | - | chr5_3:12514241-12514260 | Msa0799340:intron | 30.0% | |
| AAATTGTCAAAGCACAAACG+AGG | + | chr5_3:12513027-12513046 | None:intergenic | 35.0% | |
| CTTGGATTTGCATAACAATC+TGG | + | chr5_3:12513177-12513196 | None:intergenic | 35.0% | |
| AAAAATTGACAGGGTTGAGT+AGG | + | chr5_3:12513380-12513399 | None:intergenic | 35.0% | |
| !!! | GAGTGTTGTGCACATTTTTT+AGG | - | chr5_3:12513413-12513432 | Msa0799340:CDS | 35.0% |
| ACCTAGACATTGCATTACTT+TGG | - | chr5_3:12513506-12513525 | Msa0799340:CDS | 35.0% | |
| !! | TGGCTATTAACCTGTTTTAG+AGG | - | chr5_3:12513556-12513575 | Msa0799340:CDS | 35.0% |
| !! | GGCTATTAACCTGTTTTAGA+GGG | - | chr5_3:12513557-12513576 | Msa0799340:CDS | 35.0% |
| TATGGACAGACAGTAAATGA+TGG | - | chr5_3:12513599-12513618 | Msa0799340:CDS | 35.0% | |
| AGAATCCCTTGCAAATACAA+TGG | - | chr5_3:12514053-12514072 | Msa0799340:intron | 35.0% | |
| ATAAGAATGGCTAAGTAGTG+AGG | + | chr5_3:12514119-12514138 | None:intergenic | 35.0% | |
| GCCATTCTTATTCTCTATGT+TGG | - | chr5_3:12514128-12514147 | Msa0799340:intron | 35.0% | |
| GGGTTTACTTGAAATGGTAA+TGG | - | chr5_3:12514247-12514266 | Msa0799340:intron | 35.0% | |
| !! | ACTTGAAATGGTAATGGAAC+AGG | - | chr5_3:12514253-12514272 | Msa0799340:intron | 35.0% |
| ATCACTAGAGATAACAGTCT+TGG | + | chr5_3:12514408-12514427 | None:intergenic | 35.0% | |
| AGACTGTTATCTCTAGTGAT+TGG | - | chr5_3:12514408-12514427 | Msa0799340:CDS | 35.0% | |
| GACTGTTATCTCTAGTGATT+GGG | - | chr5_3:12514409-12514428 | Msa0799340:CDS | 35.0% | |
| TTTATAGAATGACACAGACC+AGG | + | chr5_3:12514531-12514550 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTCTACTTGTGTT+TGG | - | chr5_3:12514578-12514597 | Msa0799340:five_prime_UTR | 35.0% |
| AAATTGTCAAAGCACAAACG+AGG | + | chr5_3:12513027-12513046 | None:intergenic | 35.0% | |
| CTTGGATTTGCATAACAATC+TGG | + | chr5_3:12513177-12513196 | None:intergenic | 35.0% | |
| AAAAATTGACAGGGTTGAGT+AGG | + | chr5_3:12513380-12513399 | None:intergenic | 35.0% | |
| !!! | GAGTGTTGTGCACATTTTTT+AGG | - | chr5_3:12513413-12513432 | Msa0799340:CDS | 35.0% |
| ACCTAGACATTGCATTACTT+TGG | - | chr5_3:12513506-12513525 | Msa0799340:CDS | 35.0% | |
| !! | TGGCTATTAACCTGTTTTAG+AGG | - | chr5_3:12513556-12513575 | Msa0799340:CDS | 35.0% |
| !! | GGCTATTAACCTGTTTTAGA+GGG | - | chr5_3:12513557-12513576 | Msa0799340:CDS | 35.0% |
| TATGGACAGACAGTAAATGA+TGG | - | chr5_3:12513599-12513618 | Msa0799340:CDS | 35.0% | |
| AGAATCCCTTGCAAATACAA+TGG | - | chr5_3:12514053-12514072 | Msa0799340:intron | 35.0% | |
| ATAAGAATGGCTAAGTAGTG+AGG | + | chr5_3:12514119-12514138 | None:intergenic | 35.0% | |
| GCCATTCTTATTCTCTATGT+TGG | - | chr5_3:12514128-12514147 | Msa0799340:intron | 35.0% | |
| GGGTTTACTTGAAATGGTAA+TGG | - | chr5_3:12514247-12514266 | Msa0799340:intron | 35.0% | |
| !! | ACTTGAAATGGTAATGGAAC+AGG | - | chr5_3:12514253-12514272 | Msa0799340:intron | 35.0% |
| ATCACTAGAGATAACAGTCT+TGG | + | chr5_3:12514408-12514427 | None:intergenic | 35.0% | |
| AGACTGTTATCTCTAGTGAT+TGG | - | chr5_3:12514408-12514427 | Msa0799340:CDS | 35.0% | |
| GACTGTTATCTCTAGTGATT+GGG | - | chr5_3:12514409-12514428 | Msa0799340:CDS | 35.0% | |
| TTTATAGAATGACACAGACC+AGG | + | chr5_3:12514531-12514550 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTCTACTTGTGTT+TGG | - | chr5_3:12514578-12514597 | Msa0799340:five_prime_UTR | 35.0% |
| GCAAACAAAAGAGTCTTGAG+AGG | + | chr5_3:12513130-12513149 | None:intergenic | 40.0% | |
| !! | TGCTCTAGAGCAACCTATTA+TGG | - | chr5_3:12513147-12513166 | Msa0799340:CDS | 40.0% |
| ACAATCTGGGCTACCATAAT+AGG | + | chr5_3:12513163-12513182 | None:intergenic | 40.0% | |
| AATGCAATGTCTAGGTTCAC+CGG | + | chr5_3:12513502-12513521 | None:intergenic | 40.0% | |
| GCCAAAGTAATGCAATGTCT+AGG | + | chr5_3:12513510-12513529 | None:intergenic | 40.0% | |
| GTTTCTTCGCTATGGAAGAA+TGG | - | chr5_3:12513635-12513654 | Msa0799340:CDS | 40.0% | |
| TGCCCAAATTTGAATAGCCA+CGG | + | chr5_3:12513974-12513993 | None:intergenic | 40.0% | |
| ATGTAACTGCTGTTCAGTTG+TGG | - | chr5_3:12514162-12514181 | Msa0799340:intron | 40.0% | |
| AACAGGAAGATTGCCAAGAA+TGG | - | chr5_3:12514270-12514289 | Msa0799340:intron | 40.0% | |
| ! | GACTAGTGTTTTACTGTTCC+TGG | - | chr5_3:12514510-12514529 | Msa0799340:five_prime_UTR | 40.0% |
| GCAAACAAAAGAGTCTTGAG+AGG | + | chr5_3:12513130-12513149 | None:intergenic | 40.0% | |
| !! | TGCTCTAGAGCAACCTATTA+TGG | - | chr5_3:12513147-12513166 | Msa0799340:CDS | 40.0% |
| ACAATCTGGGCTACCATAAT+AGG | + | chr5_3:12513163-12513182 | None:intergenic | 40.0% | |
| AATGCAATGTCTAGGTTCAC+CGG | + | chr5_3:12513502-12513521 | None:intergenic | 40.0% | |
| GCCAAAGTAATGCAATGTCT+AGG | + | chr5_3:12513510-12513529 | None:intergenic | 40.0% | |
| GTTTCTTCGCTATGGAAGAA+TGG | - | chr5_3:12513635-12513654 | Msa0799340:CDS | 40.0% | |
| TGCCCAAATTTGAATAGCCA+CGG | + | chr5_3:12513974-12513993 | None:intergenic | 40.0% | |
| ATGTAACTGCTGTTCAGTTG+TGG | - | chr5_3:12514162-12514181 | Msa0799340:intron | 40.0% | |
| AACAGGAAGATTGCCAAGAA+TGG | - | chr5_3:12514270-12514289 | Msa0799340:intron | 40.0% | |
| ! | GACTAGTGTTTTACTGTTCC+TGG | - | chr5_3:12514510-12514529 | Msa0799340:five_prime_UTR | 40.0% |
| TCTTGAGAGGAACACAAGAC+AGG | + | chr5_3:12513117-12513136 | None:intergenic | 45.0% | |
| GCTTGTGGCTATGGTGATTA+TGG | - | chr5_3:12513581-12513600 | Msa0799340:CDS | 45.0% | |
| GTAAATGATGGCAATGTCGC+AGG | - | chr5_3:12513611-12513630 | Msa0799340:CDS | 45.0% | |
| TCGCTATGGAAGAATGGATC+TGG | - | chr5_3:12513641-12513660 | Msa0799340:CDS | 45.0% | |
| TGGAAGAATGGATCTGGTTG+TGG | - | chr5_3:12513647-12513666 | Msa0799340:CDS | 45.0% | |
| CCATTCTCGTCACACAATTC+TGG | + | chr5_3:12513891-12513910 | None:intergenic | 45.0% | |
| CCAGAATTGTGTGACGAGAA+TGG | - | chr5_3:12513888-12513907 | Msa0799340:CDS | 45.0% | |
| TGACGAGAATGGAGCATATG+TGG | - | chr5_3:12513899-12513918 | Msa0799340:CDS | 45.0% | |
| ! | TATGTGGTGGTGACCGATTT+CGG | - | chr5_3:12513915-12513934 | Msa0799340:CDS | 45.0% |
| TCCCCGTGGCTATTCAAATT+TGG | - | chr5_3:12513968-12513987 | Msa0799340:intron | 45.0% | |
| CCCAAATTTGAATAGCCACG+GGG | + | chr5_3:12513972-12513991 | None:intergenic | 45.0% | |
| CCCCGTGGCTATTCAAATTT+GGG | - | chr5_3:12513969-12513988 | Msa0799340:intron | 45.0% | |
| GCCCAAATTTGAATAGCCAC+GGG | + | chr5_3:12513973-12513992 | None:intergenic | 45.0% | |
| ! | GAGGATTTTTGCTGCGTTCA+TGG | + | chr5_3:12514100-12514119 | None:intergenic | 45.0% |
| AGGAAGATTGCCAAGAATGG+AGG | - | chr5_3:12514273-12514292 | Msa0799340:intron | 45.0% | |
| ACTTGATCTCACCTCTTGGA+GGG | + | chr5_3:12514340-12514359 | None:intergenic | 45.0% | |
| AACTTGATCTCACCTCTTGG+AGG | + | chr5_3:12514341-12514360 | None:intergenic | 45.0% | |
| CTCAACTTGATCTCACCTCT+TGG | + | chr5_3:12514344-12514363 | None:intergenic | 45.0% | |
| ! | CAAGAGGTGAGATCAAGTTG+AGG | - | chr5_3:12514342-12514361 | Msa0799340:intron | 45.0% |
| ATCTCTAGTGATTGGGAAGC+TGG | - | chr5_3:12514416-12514435 | Msa0799340:CDS | 45.0% | |
| TCTCTAGTGATTGGGAAGCT+GGG | - | chr5_3:12514417-12514436 | Msa0799340:CDS | 45.0% | |
| TCTTGAGAGGAACACAAGAC+AGG | + | chr5_3:12513117-12513136 | None:intergenic | 45.0% | |
| GCTTGTGGCTATGGTGATTA+TGG | - | chr5_3:12513581-12513600 | Msa0799340:CDS | 45.0% | |
| GTAAATGATGGCAATGTCGC+AGG | - | chr5_3:12513611-12513630 | Msa0799340:CDS | 45.0% | |
| TCGCTATGGAAGAATGGATC+TGG | - | chr5_3:12513641-12513660 | Msa0799340:CDS | 45.0% | |
| TGGAAGAATGGATCTGGTTG+TGG | - | chr5_3:12513647-12513666 | Msa0799340:CDS | 45.0% | |
| CCATTCTCGTCACACAATTC+TGG | + | chr5_3:12513891-12513910 | None:intergenic | 45.0% | |
| CCAGAATTGTGTGACGAGAA+TGG | - | chr5_3:12513888-12513907 | Msa0799340:CDS | 45.0% | |
| TGACGAGAATGGAGCATATG+TGG | - | chr5_3:12513899-12513918 | Msa0799340:CDS | 45.0% | |
| ! | TATGTGGTGGTGACCGATTT+CGG | - | chr5_3:12513915-12513934 | Msa0799340:CDS | 45.0% |
| TCCCCGTGGCTATTCAAATT+TGG | - | chr5_3:12513968-12513987 | Msa0799340:intron | 45.0% | |
| CCCAAATTTGAATAGCCACG+GGG | + | chr5_3:12513972-12513991 | None:intergenic | 45.0% | |
| CCCCGTGGCTATTCAAATTT+GGG | - | chr5_3:12513969-12513988 | Msa0799340:intron | 45.0% | |
| GCCCAAATTTGAATAGCCAC+GGG | + | chr5_3:12513973-12513992 | None:intergenic | 45.0% | |
| ! | GAGGATTTTTGCTGCGTTCA+TGG | + | chr5_3:12514100-12514119 | None:intergenic | 45.0% |
| AGGAAGATTGCCAAGAATGG+AGG | - | chr5_3:12514273-12514292 | Msa0799340:intron | 45.0% | |
| ACTTGATCTCACCTCTTGGA+GGG | + | chr5_3:12514340-12514359 | None:intergenic | 45.0% | |
| AACTTGATCTCACCTCTTGG+AGG | + | chr5_3:12514341-12514360 | None:intergenic | 45.0% | |
| CTCAACTTGATCTCACCTCT+TGG | + | chr5_3:12514344-12514363 | None:intergenic | 45.0% | |
| ! | CAAGAGGTGAGATCAAGTTG+AGG | - | chr5_3:12514342-12514361 | Msa0799340:intron | 45.0% |
| ATCTCTAGTGATTGGGAAGC+TGG | - | chr5_3:12514416-12514435 | Msa0799340:CDS | 45.0% | |
| TCTCTAGTGATTGGGAAGCT+GGG | - | chr5_3:12514417-12514436 | Msa0799340:CDS | 45.0% | |
| !! | TTAAGTAATATATATTATAA+AGG | - | chr5_3:12513784-12513803 | Msa0799340:intron | 5.0% |
| !! | TTAAGTAATATATATTATAA+AGG | - | chr5_3:12513784-12513803 | Msa0799340:intron | 5.0% |
| !! | CCACAAGCTCCCTCTAAAAC+AGG | + | chr5_3:12513569-12513588 | None:intergenic | 50.0% |
| !!! | CCTGTTTTAGAGGGAGCTTG+TGG | - | chr5_3:12513566-12513585 | Msa0799340:CDS | 50.0% |
| TTAGAGGGAGCTTGTGGCTA+TGG | - | chr5_3:12513572-12513591 | Msa0799340:CDS | 50.0% | |
| CGAGAATGGAGCATATGTGG+TGG | - | chr5_3:12513902-12513921 | Msa0799340:CDS | 50.0% | |
| CCTATCTCCCACACCGAAAT+CGG | + | chr5_3:12513931-12513950 | None:intergenic | 50.0% | |
| AACTGCTGTTCAGTTGTGGC+AGG | - | chr5_3:12514166-12514185 | Msa0799340:intron | 50.0% | |
| ! | TACGCATTGGCCTCCATTCT+TGG | + | chr5_3:12514286-12514305 | None:intergenic | 50.0% |
| AAGAATGGAGGCCAATGCGT+AGG | - | chr5_3:12514285-12514304 | Msa0799340:intron | 50.0% | |
| AGAATGGAGGCCAATGCGTA+GGG | - | chr5_3:12514286-12514305 | Msa0799340:intron | 50.0% | |
| GTTCCAAATGCCCTACGCAT+TGG | + | chr5_3:12514299-12514318 | None:intergenic | 50.0% | |
| AAGTTGAGGCTCCAAGTGAG+TGG | - | chr5_3:12514356-12514375 | Msa0799340:intron | 50.0% | |
| ! | TCCAAGTGAGTGGTAGTGCT+GGG | - | chr5_3:12514366-12514385 | Msa0799340:CDS | 50.0% |
| ! | TGGTAGTGCTGGGCTGTATT+GGG | - | chr5_3:12514376-12514395 | Msa0799340:CDS | 50.0% |
| CTCTAGTGATTGGGAAGCTG+GGG | - | chr5_3:12514418-12514437 | Msa0799340:CDS | 50.0% | |
| !! | CCACAAGCTCCCTCTAAAAC+AGG | + | chr5_3:12513569-12513588 | None:intergenic | 50.0% |
| !!! | CCTGTTTTAGAGGGAGCTTG+TGG | - | chr5_3:12513566-12513585 | Msa0799340:CDS | 50.0% |
| TTAGAGGGAGCTTGTGGCTA+TGG | - | chr5_3:12513572-12513591 | Msa0799340:CDS | 50.0% | |
| CGAGAATGGAGCATATGTGG+TGG | - | chr5_3:12513902-12513921 | Msa0799340:CDS | 50.0% | |
| CCTATCTCCCACACCGAAAT+CGG | + | chr5_3:12513931-12513950 | None:intergenic | 50.0% | |
| AACTGCTGTTCAGTTGTGGC+AGG | - | chr5_3:12514166-12514185 | Msa0799340:intron | 50.0% | |
| ! | TACGCATTGGCCTCCATTCT+TGG | + | chr5_3:12514286-12514305 | None:intergenic | 50.0% |
| AAGAATGGAGGCCAATGCGT+AGG | - | chr5_3:12514285-12514304 | Msa0799340:intron | 50.0% | |
| AGAATGGAGGCCAATGCGTA+GGG | - | chr5_3:12514286-12514305 | Msa0799340:intron | 50.0% | |
| GTTCCAAATGCCCTACGCAT+TGG | + | chr5_3:12514299-12514318 | None:intergenic | 50.0% | |
| AAGTTGAGGCTCCAAGTGAG+TGG | - | chr5_3:12514356-12514375 | Msa0799340:intron | 50.0% | |
| ! | TCCAAGTGAGTGGTAGTGCT+GGG | - | chr5_3:12514366-12514385 | Msa0799340:CDS | 50.0% |
| ! | TGGTAGTGCTGGGCTGTATT+GGG | - | chr5_3:12514376-12514395 | Msa0799340:CDS | 50.0% |
| CTCTAGTGATTGGGAAGCTG+GGG | - | chr5_3:12514418-12514437 | Msa0799340:CDS | 50.0% | |
| TCGCAGGCGTTTCTTCGCTA+TGG | - | chr5_3:12513627-12513646 | Msa0799340:CDS | 55.0% | |
| ! | GTGGTGACCGATTTCGGTGT+GGG | - | chr5_3:12513921-12513940 | Msa0799340:CDS | 55.0% |
| ! | CCGATTTCGGTGTGGGAGAT+AGG | - | chr5_3:12513928-12513947 | Msa0799340:CDS | 55.0% |
| GACTTCATCATGAGTCCCCG+TGG | - | chr5_3:12513954-12513973 | Msa0799340:CDS | 55.0% | |
| ! | AGGCCAATGCGTAGGGCATT+TGG | - | chr5_3:12514293-12514312 | Msa0799340:intron | 55.0% |
| GATGCAGAGAACCCTCCAAG+AGG | - | chr5_3:12514326-12514345 | Msa0799340:intron | 55.0% | |
| ! | CTCCAAGTGAGTGGTAGTGC+TGG | - | chr5_3:12514365-12514384 | Msa0799340:CDS | 55.0% |
| ! | GTGGTAGTGCTGGGCTGTAT+TGG | - | chr5_3:12514375-12514394 | Msa0799340:CDS | 55.0% |
| ! | TAGTGCTGGGCTGTATTGGG+TGG | - | chr5_3:12514379-12514398 | Msa0799340:CDS | 55.0% |
| TCGCAGGCGTTTCTTCGCTA+TGG | - | chr5_3:12513627-12513646 | Msa0799340:CDS | 55.0% | |
| ! | GTGGTGACCGATTTCGGTGT+GGG | - | chr5_3:12513921-12513940 | Msa0799340:CDS | 55.0% |
| ! | CCGATTTCGGTGTGGGAGAT+AGG | - | chr5_3:12513928-12513947 | Msa0799340:CDS | 55.0% |
| GACTTCATCATGAGTCCCCG+TGG | - | chr5_3:12513954-12513973 | Msa0799340:CDS | 55.0% | |
| ! | AGGCCAATGCGTAGGGCATT+TGG | - | chr5_3:12514293-12514312 | Msa0799340:intron | 55.0% |
| GATGCAGAGAACCCTCCAAG+AGG | - | chr5_3:12514326-12514345 | Msa0799340:intron | 55.0% | |
| ! | CTCCAAGTGAGTGGTAGTGC+TGG | - | chr5_3:12514365-12514384 | Msa0799340:CDS | 55.0% |
| ! | GTGGTAGTGCTGGGCTGTAT+TGG | - | chr5_3:12514375-12514394 | Msa0799340:CDS | 55.0% |
| ! | TAGTGCTGGGCTGTATTGGG+TGG | - | chr5_3:12514379-12514398 | Msa0799340:CDS | 55.0% |
| ! | GGTGGTGACCGATTTCGGTG+TGG | - | chr5_3:12513920-12513939 | Msa0799340:CDS | 60.0% |
| GCCCAGCACTACCACTCACT+TGG | + | chr5_3:12514370-12514389 | None:intergenic | 60.0% | |
| ! | GGTGGTGACCGATTTCGGTG+TGG | - | chr5_3:12513920-12513939 | Msa0799340:CDS | 60.0% |
| GCCCAGCACTACCACTCACT+TGG | + | chr5_3:12514370-12514389 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12512959 | 12514601 | 12512959 | ID=Msa0799340;Name=Msa0799340 |
| chr5_3 | mRNA | 12512959 | 12514601 | 12512959 | ID=Msa0799340-mRNA-1;Parent=Msa0799340;Name=Msa0799340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=98|1|1|1|1|1|4|129|252 |
| chr5_3 | exon | 12512959 | 12513285 | 12512959 | ID=Msa0799340-mRNA-1:exon:5167;Parent=Msa0799340-mRNA-1 |
| chr5_3 | exon | 12513373 | 12513687 | 12513373 | ID=Msa0799340-mRNA-1:exon:5166;Parent=Msa0799340-mRNA-1 |
| chr5_3 | exon | 12513878 | 12513984 | 12513878 | ID=Msa0799340-mRNA-1:exon:5165;Parent=Msa0799340-mRNA-1 |
| chr5_3 | exon | 12514365 | 12514601 | 12514365 | ID=Msa0799340-mRNA-1:exon:5164;Parent=Msa0799340-mRNA-1 |
| chr5_3 | five_prime_UTR | 12514504 | 12514601 | 12514504 | ID=Msa0799340-mRNA-1:five_prime_utr;Parent=Msa0799340-mRNA-1 |
| chr5_3 | CDS | 12514365 | 12514503 | 12514365 | ID=Msa0799340-mRNA-1:cds;Parent=Msa0799340-mRNA-1 |
| chr5_3 | CDS | 12513878 | 12513984 | 12513878 | ID=Msa0799340-mRNA-1:cds;Parent=Msa0799340-mRNA-1 |
| chr5_3 | CDS | 12513373 | 12513687 | 12513373 | ID=Msa0799340-mRNA-1:cds;Parent=Msa0799340-mRNA-1 |
| chr5_3 | CDS | 12513088 | 12513285 | 12513088 | ID=Msa0799340-mRNA-1:cds;Parent=Msa0799340-mRNA-1 |
| chr5_3 | three_prime_UTR | 12512959 | 12513087 | 12512959 | ID=Msa0799340-mRNA-1:three_prime_utr;Parent=Msa0799340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
