Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754930 | XP_003611388.2 | 96.429 | 252 | 9 | 0 | 1 | 252 | 1 | 252 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754930 | sp|O23547|EXLB1_ARATH | 62.343 | 239 | 87 | 3 | 12 | 249 | 11 | 247 | 4.21e-111 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754930 | G7JYL2 | 96.429 | 252 | 9 | 0 | 1 | 252 | 1 | 252 | 0.0 | 508 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa0754930 | 0.807498 | 4.909385e-50 | -8.615850e-47 |
| Msa0051630 | Msa0754930 | 0.809281 | 2.044501e-50 | -8.615850e-47 |
| Msa0051740 | Msa0754930 | 0.817142 | 3.844824e-52 | -8.615850e-47 |
| Msa0051750 | Msa0754930 | 0.804649 | 1.952080e-49 | -8.615850e-47 |
| Msa0071250 | Msa0754930 | 0.814699 | 1.349064e-51 | -8.615850e-47 |
| Msa0103790 | Msa0754930 | 0.809068 | 2.271004e-50 | -8.615850e-47 |
| Msa0105520 | Msa0754930 | 0.813072 | 3.080568e-51 | -8.615850e-47 |
| Msa0106620 | Msa0754930 | 0.819517 | 1.114359e-52 | -8.615850e-47 |
| Msa0106710 | Msa0754930 | 0.818754 | 1.662084e-52 | -8.615850e-47 |
| Msa0628420 | Msa0754930 | 0.801501 | 8.740912e-49 | -8.615850e-47 |
| Msa0640940 | Msa0754930 | 0.827298 | 1.690350e-54 | -8.615850e-47 |
| Msa0642970 | Msa0754930 | 0.811347 | 7.326833e-51 | -8.615850e-47 |
| Msa0643320 | Msa0754930 | 0.820561 | 6.426480e-53 | -8.615850e-47 |
| Msa0673270 | Msa0754930 | 0.806889 | 6.606873e-50 | -8.615850e-47 |
| Msa0679360 | Msa0754930 | 0.829847 | 4.094252e-55 | -8.615850e-47 |
| Msa0682680 | Msa0754930 | 0.806618 | 7.538399e-50 | -8.615850e-47 |
| Msa0683600 | Msa0754930 | 0.800670 | 1.292584e-48 | -8.615850e-47 |
| Msa0705990 | Msa0754930 | 0.806016 | 1.009598e-49 | -8.615850e-47 |
| Msa0709160 | Msa0754930 | 0.832186 | 1.091497e-55 | -8.615850e-47 |
| Msa0713340 | Msa0754930 | 0.997695 | 2.436444e-247 | -8.615850e-47 |
| Msa0750250 | Msa0754930 | 0.805379 | 1.373399e-49 | -8.615850e-47 |
| Msa0754930 | Msa0763920 | 0.802612 | 5.164985e-49 | -8.615850e-47 |
| Msa0754930 | Msa0773590 | 0.802300 | 5.989286e-49 | -8.615850e-47 |
| Msa0754930 | Msa0789560 | 0.800278 | 1.553692e-48 | -8.615850e-47 |
| Msa0754930 | Msa0799340 | 0.992759 | 2.929998e-195 | -8.615850e-47 |
| Msa0754930 | Msa0800370 | 0.811981 | 5.334357e-51 | -8.615850e-47 |
| Msa0754930 | Msa0811040 | 0.813031 | 3.144850e-51 | -8.615850e-47 |
| Msa0754930 | Msa0826150 | 0.810716 | 1.003574e-50 | -8.615850e-47 |
| Msa0754930 | Msa0833190 | -0.806221 | 9.140404e-50 | -8.615850e-47 |
| Msa0754930 | Msa0834330 | 0.989429 | 4.403546e-178 | -8.615850e-47 |
| Msa0754930 | Msa0844280 | 0.801529 | 8.624740e-49 | -8.615850e-47 |
| Msa0754930 | Msa0844610 | 0.801310 | 9.566105e-49 | -8.615850e-47 |
| Msa0754930 | Msa0870650 | 0.833583 | 4.905373e-56 | -8.615850e-47 |
| Msa0754930 | Msa0892640 | 0.803463 | 3.445239e-49 | -8.615850e-47 |
| Msa0754930 | Msa0903780 | 0.829449 | 5.114708e-55 | -8.615850e-47 |
| Msa0754930 | Msa0905750 | 0.839559 | 1.473603e-57 | -8.615850e-47 |
| Msa0754930 | Msa0934140 | 0.817221 | 3.690507e-52 | -8.615850e-47 |
| Msa0754930 | Msa0944200 | 0.805509 | 1.289595e-49 | -8.615850e-47 |
| Msa0754930 | Msa0947800 | 0.806001 | 1.016814e-49 | -8.615850e-47 |
| Msa0754930 | Msa0958030 | 0.825419 | 4.735957e-54 | -8.615850e-47 |
| Msa0754930 | Msa0974950 | 0.809906 | 1.501306e-50 | -8.615850e-47 |
| Msa0754930 | Msa0980540 | 0.808994 | 2.355779e-50 | -8.615850e-47 |
| Msa0754930 | Msa0992580 | 0.828587 | 8.273580e-55 | -8.615850e-47 |
| Msa0754930 | Msa1027250 | 0.807396 | 5.158574e-50 | -8.615850e-47 |
| Msa0754930 | Msa1027300 | 0.809278 | 2.047683e-50 | -8.615850e-47 |
| Msa0754930 | Msa1027360 | 0.812528 | 4.052612e-51 | -8.615850e-47 |
| Msa0754930 | Msa1063420 | 0.807895 | 4.042041e-50 | -8.615850e-47 |
| Msa0754930 | Msa1093100 | 0.843574 | 1.289037e-58 | -8.615850e-47 |
| Msa0754930 | Msa1131490 | 0.809904 | 1.502713e-50 | -8.615850e-47 |
| Msa0754930 | Msa1178580 | 0.823300 | 1.491490e-53 | -8.615850e-47 |
| Msa0754930 | Msa1188560 | 0.815065 | 1.119110e-51 | -8.615850e-47 |
| Msa0754930 | Msa1205480 | 0.832843 | 7.500550e-56 | -8.615850e-47 |
| Msa0754930 | Msa1205590 | 0.845981 | 2.891886e-59 | -8.615850e-47 |
| Msa0754930 | Msa1206650 | 0.837081 | 6.415064e-57 | -8.615850e-47 |
| Msa0754930 | Msa1209670 | 0.835083 | 2.062366e-56 | -8.615850e-47 |
| Msa0754930 | Msa1233850 | 0.841375 | 4.936902e-58 | -8.615850e-47 |
| Msa0754930 | Msa1242640 | 0.804400 | 2.199823e-49 | -8.615850e-47 |
| Msa0754930 | Msa1250110 | 0.802392 | 5.734852e-49 | -8.615850e-47 |
| Msa0754930 | Msa1257070 | 0.811757 | 5.966579e-51 | -8.615850e-47 |
| Msa0754930 | Msa1262010 | 0.800152 | 1.647919e-48 | -8.615850e-47 |
| Msa0754930 | Msa1264420 | 0.812916 | 3.331666e-51 | -8.615850e-47 |
| Msa0754930 | Msa1270660 | 0.808690 | 2.736528e-50 | -8.615850e-47 |
| Msa0754930 | Msa1276150 | 0.823921 | 1.067552e-53 | -8.615850e-47 |
| Msa0754930 | Msa1276970 | 0.824066 | 9.871775e-54 | -8.615850e-47 |
| Msa0754930 | Msa1293400 | 0.824940 | 6.148245e-54 | -8.615850e-47 |
| Msa0754930 | Msa1297530 | 0.818022 | 2.434941e-52 | -8.615850e-47 |
| Msa0754930 | Msa1307180 | 0.820489 | 6.677350e-53 | -8.615850e-47 |
| Msa0754930 | Msa1315750 | 0.807170 | 5.760484e-50 | -8.615850e-47 |
| Msa0754930 | Msa1316360 | 0.811971 | 5.359708e-51 | -8.615850e-47 |
| Msa0754930 | Msa1320820 | 0.825750 | 3.953887e-54 | -8.615850e-47 |
| Msa0754930 | Msa1323690 | 0.808202 | 3.477405e-50 | -8.615850e-47 |
| Msa0754930 | Msa1336040 | 0.800692 | 1.279266e-48 | -8.615850e-47 |
| Msa0754930 | Msa1336560 | 0.812704 | 3.708109e-51 | -8.615850e-47 |
| Msa0754930 | Msa1337170 | 0.828903 | 6.941474e-55 | -8.615850e-47 |
| Msa0754930 | Msa1351540 | 0.806064 | 9.861311e-50 | -8.615850e-47 |
| Msa0754930 | Msa1356610 | 0.810948 | 8.940837e-51 | -8.615850e-47 |
| Msa0754930 | Msa1370590 | 0.829492 | 4.994297e-55 | -8.615850e-47 |
| Msa0754930 | Msa1384100 | 0.829091 | 6.249963e-55 | -8.615850e-47 |
| Msa0754930 | Msa1395730 | 0.806554 | 7.775146e-50 | -8.615850e-47 |
| Msa0754930 | Msa1410420 | 0.812363 | 4.402496e-51 | -8.615850e-47 |
| Msa0754930 | Msa1416260 | 0.812073 | 5.093718e-51 | -8.615850e-47 |
| Msa0754930 | Msa1432480 | 0.813287 | 2.763131e-51 | -8.615850e-47 |
| Msa0754930 | Msa1442790 | 0.813189 | 2.902950e-51 | -8.615850e-47 |
| Msa0754930 | Msa1444120 | 0.828910 | 6.913205e-55 | -8.615850e-47 |
| Msa0754930 | Msa1451150 | 0.824974 | 6.035364e-54 | -8.615850e-47 |
| Msa0754930 | Msa1454530 | 0.806769 | 7.002778e-50 | -8.615850e-47 |
| Msa0754930 | Msa1454960 | 0.814914 | 1.208349e-51 | -8.615850e-47 |
| Msa0754930 | Msa1459960 | 0.802567 | 5.276504e-49 | -8.615850e-47 |
| Msa0123510 | Msa0754930 | 0.810939 | 8.983066e-51 | -8.615850e-47 |
| Msa0126790 | Msa0754930 | 0.811438 | 7.001942e-51 | -8.615850e-47 |
| Msa0126880 | Msa0754930 | 0.801764 | 7.718720e-49 | -8.615850e-47 |
| Msa0136120 | Msa0754930 | 0.800900 | 1.159830e-48 | -8.615850e-47 |
| Msa0139670 | Msa0754930 | 0.801842 | 7.441089e-49 | -8.615850e-47 |
| Msa0141400 | Msa0754930 | 0.800044 | 1.733161e-48 | -8.615850e-47 |
| Msa0142410 | Msa0754930 | 0.801587 | 8.391959e-49 | -8.615850e-47 |
| Msa0142500 | Msa0754930 | 0.808076 | 3.699041e-50 | -8.615850e-47 |
| Msa0146080 | Msa0754930 | 0.825598 | 4.295627e-54 | -8.615850e-47 |
| Msa0147980 | Msa0754930 | 0.806461 | 8.132900e-50 | -8.615850e-47 |
| Msa0171870 | Msa0754930 | 0.806247 | 9.023860e-50 | -8.615850e-47 |
| Msa0171980 | Msa0754930 | 0.822099 | 2.839123e-53 | -8.615850e-47 |
| Msa0190120 | Msa0754930 | 0.844839 | 5.894646e-59 | -8.615850e-47 |
| Msa0192640 | Msa0754930 | 0.802843 | 4.629101e-49 | -8.615850e-47 |
| Msa0205010 | Msa0754930 | 0.805817 | 1.111513e-49 | -8.615850e-47 |
| Msa0207030 | Msa0754930 | 0.819085 | 1.397456e-52 | -8.615850e-47 |
| Msa0238030 | Msa0754930 | 0.801956 | 7.049456e-49 | -8.615850e-47 |
| Msa0382370 | Msa0754930 | 0.804985 | 1.660432e-49 | -8.615850e-47 |
| Msa0390480 | Msa0754930 | 0.818375 | 2.025436e-52 | -8.615850e-47 |
| Msa0395980 | Msa0754930 | 0.810728 | 9.979226e-51 | -8.615850e-47 |
| Msa0403770 | Msa0754930 | 0.832862 | 7.417215e-56 | -8.615850e-47 |
| Msa0427580 | Msa0754930 | 0.812904 | 3.351847e-51 | -8.615850e-47 |
| Msa0431210 | Msa0754930 | 0.800277 | 1.554380e-48 | -8.615850e-47 |
| Msa0443430 | Msa0754930 | 0.814642 | 1.388191e-51 | -8.615850e-47 |
| Msa0450400 | Msa0754930 | -0.806008 | 1.013407e-49 | -8.615850e-47 |
| Msa0482040 | Msa0754930 | 0.813843 | 2.084646e-51 | -8.615850e-47 |
| Msa0244970 | Msa0754930 | 0.840810 | 6.946172e-58 | -8.615850e-47 |
| Msa0244980 | Msa0754930 | 0.844784 | 6.098683e-59 | -8.615850e-47 |
| Msa0249550 | Msa0754930 | 0.801386 | 9.229482e-49 | -8.615850e-47 |
| Msa0271890 | Msa0754930 | 0.807387 | 5.182431e-50 | -8.615850e-47 |
| Msa0283420 | Msa0754930 | 0.844610 | 6.795960e-59 | -8.615850e-47 |
| Msa0285330 | Msa0754930 | 0.814134 | 1.798221e-51 | -8.615850e-47 |
| Msa0296790 | Msa0754930 | 0.812678 | 3.757876e-51 | -8.615850e-47 |
| Msa0304840 | Msa0754930 | 0.804021 | 2.638402e-49 | -8.615850e-47 |
| Msa0307960 | Msa0754930 | 0.807291 | 5.430597e-50 | -8.615850e-47 |
| Msa0310860 | Msa0754930 | 0.803415 | 3.524861e-49 | -8.615850e-47 |
| Msa0321690 | Msa0754930 | 0.844691 | 6.464468e-59 | -8.615850e-47 |
| Msa0322900 | Msa0754930 | 0.827853 | 1.243803e-54 | -8.615850e-47 |
| Msa0363060 | Msa0754930 | 0.803787 | 2.950590e-49 | -8.615850e-47 |
| Msa0363640 | Msa0754930 | 0.806327 | 8.682964e-50 | -8.615850e-47 |
| Msa0482940 | Msa0754930 | 0.829051 | 6.389942e-55 | -8.615850e-47 |
| Msa0489660 | Msa0754930 | 0.814946 | 1.189151e-51 | -8.615850e-47 |
| Msa0491000 | Msa0754930 | 0.817388 | 3.384219e-52 | -8.615850e-47 |
| Msa0511770 | Msa0754930 | 0.802421 | 5.655501e-49 | -8.615850e-47 |
| Msa0518170 | Msa0754930 | 0.826305 | 2.918210e-54 | -8.615850e-47 |
| Msa0531250 | Msa0754930 | 0.801491 | 8.782589e-49 | -8.615850e-47 |
| Msa0542290 | Msa0754930 | 0.810911 | 9.109625e-51 | -8.615850e-47 |
| Msa0542470 | Msa0754930 | 0.801503 | 8.733119e-49 | -8.615850e-47 |
| Msa0547160 | Msa0754930 | 0.822187 | 2.708520e-53 | -8.615850e-47 |
| Msa0547990 | Msa0754930 | 0.806498 | 7.989843e-50 | -8.615850e-47 |
| Msa0562690 | Msa0754930 | 0.801178 | 1.017662e-48 | -8.615850e-47 |
| Msa0566350 | Msa0754930 | 0.808647 | 2.794025e-50 | -8.615850e-47 |
| Msa0566750 | Msa0754930 | 0.809411 | 1.917560e-50 | -8.615850e-47 |
| Msa0600080 | Msa0754930 | 0.800226 | 1.591998e-48 | -8.615850e-47 |
| Msa0600450 | Msa0754930 | 0.821763 | 3.395821e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754930 | MtrunA17_Chr5g0399811 | 96.429 | 252 | 9 | 0 | 1 | 252 | 1 | 252 | 0.0 | 508 |
| Msa0754930 | MtrunA17_Chr4g0055561 | 74.502 | 251 | 64 | 0 | 2 | 252 | 1 | 251 | 8.86e-148 | 412 |
| Msa0754930 | MtrunA17_Chr4g0055601 | 61.200 | 250 | 96 | 1 | 2 | 250 | 1 | 250 | 2.15e-118 | 338 |
| Msa0754930 | MtrunA17_Chr4g0055061 | 40.239 | 251 | 142 | 2 | 10 | 252 | 3 | 253 | 2.18e-62 | 196 |
| Msa0754930 | MtrunA17_Chr4g0038741 | 40.724 | 221 | 127 | 3 | 32 | 251 | 26 | 243 | 5.30e-57 | 182 |
| Msa0754930 | MtrunA17_Chr7g0231211 | 32.046 | 259 | 155 | 7 | 10 | 251 | 16 | 270 | 2.90e-32 | 119 |
| Msa0754930 | MtrunA17_Chr4g0012801 | 30.736 | 231 | 150 | 7 | 26 | 251 | 39 | 264 | 1.40e-28 | 109 |
| Msa0754930 | MtrunA17_Chr4g0055581 | 54.255 | 94 | 42 | 1 | 95 | 187 | 13 | 106 | 1.70e-28 | 104 |
| Msa0754930 | MtrunA17_Chr2g0324201 | 30.837 | 227 | 142 | 7 | 34 | 252 | 38 | 257 | 1.88e-28 | 108 |
| Msa0754930 | MtrunA17_Chr7g0231221 | 33.921 | 227 | 137 | 8 | 34 | 251 | 53 | 275 | 3.81e-28 | 108 |
| Msa0754930 | MtrunA17_Chr2g0324221 | 30.088 | 226 | 143 | 7 | 34 | 251 | 40 | 258 | 1.89e-27 | 106 |
| Msa0754930 | MtrunA17_Chr4g0021641 | 30.531 | 226 | 142 | 7 | 34 | 251 | 46 | 264 | 4.60e-26 | 102 |
| Msa0754930 | MtrunA17_Chr1g0193631 | 28.326 | 233 | 146 | 9 | 32 | 251 | 33 | 257 | 2.51e-21 | 89.7 |
| Msa0754930 | MtrunA17_Chr4g0057091 | 25.769 | 260 | 166 | 9 | 12 | 252 | 11 | 262 | 3.64e-21 | 89.4 |
| Msa0754930 | MtrunA17_Chr7g0271001 | 26.437 | 261 | 160 | 12 | 12 | 251 | 5 | 254 | 3.70e-21 | 89.4 |
| Msa0754930 | MtrunA17_Chr3g0092071 | 28.099 | 242 | 158 | 9 | 18 | 251 | 14 | 247 | 6.85e-21 | 88.6 |
| Msa0754930 | MtrunA17_Chr7g0218751 | 27.755 | 245 | 162 | 10 | 15 | 251 | 14 | 251 | 1.23e-20 | 87.8 |
| Msa0754930 | MtrunA17_Chr7g0218741 | 27.236 | 246 | 164 | 8 | 15 | 251 | 14 | 253 | 6.77e-20 | 85.9 |
| Msa0754930 | MtrunA17_Chr8g0360041 | 27.778 | 252 | 166 | 10 | 9 | 251 | 10 | 254 | 1.14e-19 | 85.1 |
| Msa0754930 | MtrunA17_Chr3g0128791 | 27.928 | 222 | 145 | 8 | 32 | 245 | 34 | 248 | 1.34e-19 | 85.1 |
| Msa0754930 | MtrunA17_Chr3g0128801 | 25.781 | 256 | 175 | 8 | 1 | 248 | 3 | 251 | 1.47e-19 | 85.1 |
| Msa0754930 | MtrunA17_Chr5g0398271 | 25.847 | 236 | 148 | 6 | 32 | 252 | 40 | 263 | 2.30e-19 | 84.7 |
| Msa0754930 | MtrunA17_Chr7g0217661 | 28.696 | 230 | 150 | 10 | 26 | 252 | 23 | 241 | 1.99e-18 | 81.6 |
| Msa0754930 | MtrunA17_Chr5g0432611 | 27.928 | 222 | 145 | 8 | 33 | 246 | 33 | 247 | 7.72e-18 | 80.1 |
| Msa0754930 | MtrunA17_Chr3g0107291 | 24.900 | 249 | 163 | 9 | 15 | 246 | 15 | 256 | 1.27e-17 | 79.7 |
| Msa0754930 | MtrunA17_Chr3g0107311 | 24.603 | 252 | 166 | 9 | 12 | 246 | 6 | 250 | 1.91e-17 | 79.3 |
| Msa0754930 | MtrunA17_Chr4g0042521 | 26.446 | 242 | 163 | 8 | 12 | 245 | 8 | 242 | 6.97e-17 | 77.4 |
| Msa0754930 | MtrunA17_Chr5g0417701 | 26.860 | 242 | 159 | 9 | 15 | 245 | 8 | 242 | 1.19e-16 | 77.0 |
| Msa0754930 | MtrunA17_Chr8g0360721 | 26.457 | 223 | 133 | 10 | 45 | 251 | 14 | 221 | 2.22e-16 | 75.5 |
| Msa0754930 | MtrunA17_Chr7g0218761 | 28.972 | 214 | 135 | 10 | 47 | 251 | 7 | 212 | 2.55e-16 | 75.5 |
| Msa0754930 | MtrunA17_Chr4g0021561 | 27.309 | 249 | 162 | 10 | 12 | 248 | 13 | 254 | 5.64e-14 | 69.7 |
| Msa0754930 | MtrunA17_Chr1g0157061 | 23.276 | 232 | 159 | 10 | 31 | 251 | 18 | 241 | 3.78e-12 | 64.3 |
| Msa0754930 | MtrunA17_Chr5g0433841 | 26.809 | 235 | 145 | 11 | 32 | 252 | 44 | 265 | 5.50e-12 | 63.9 |
| Msa0754930 | MtrunA17_Chr6g0453341 | 27.803 | 223 | 148 | 9 | 29 | 248 | 38 | 250 | 5.93e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754930 | AT4G17030.1 | 62.343 | 239 | 87 | 3 | 12 | 249 | 11 | 247 | 4.28e-112 | 322 |
| Msa0754930 | AT3G45970.2 | 39.130 | 207 | 123 | 3 | 48 | 251 | 15 | 221 | 1.73e-49 | 163 |
| Msa0754930 | AT4G38400.1 | 40.957 | 188 | 110 | 1 | 65 | 251 | 61 | 248 | 3.13e-47 | 158 |
| Msa0754930 | AT3G45970.1 | 38.424 | 203 | 122 | 3 | 52 | 251 | 46 | 248 | 1.04e-46 | 156 |
| Msa0754930 | AT3G45960.1 | 37.766 | 188 | 116 | 1 | 65 | 251 | 12 | 199 | 5.31e-46 | 153 |
| Msa0754930 | AT3G45960.2 | 36.634 | 202 | 126 | 2 | 52 | 251 | 46 | 247 | 7.96e-46 | 154 |
| Msa0754930 | AT1G65680.1 | 32.083 | 240 | 143 | 8 | 24 | 251 | 42 | 273 | 1.85e-32 | 120 |
| Msa0754930 | AT4G28250.1 | 30.153 | 262 | 164 | 9 | 6 | 252 | 4 | 261 | 1.93e-28 | 109 |
| Msa0754930 | AT2G20750.1 | 29.389 | 262 | 159 | 9 | 13 | 252 | 11 | 268 | 2.57e-26 | 103 |
| Msa0754930 | AT4G28250.2 | 29.008 | 262 | 161 | 10 | 6 | 252 | 4 | 255 | 1.64e-23 | 95.9 |
| Msa0754930 | AT2G40610.1 | 29.528 | 254 | 164 | 9 | 1 | 245 | 1 | 248 | 4.12e-23 | 94.7 |
| Msa0754930 | AT5G05290.1 | 29.279 | 222 | 143 | 7 | 33 | 246 | 36 | 251 | 1.08e-22 | 94.0 |
| Msa0754930 | AT3G60570.1 | 28.800 | 250 | 153 | 10 | 15 | 251 | 20 | 257 | 1.72e-21 | 90.9 |
| Msa0754930 | AT5G39290.1 | 29.915 | 234 | 135 | 11 | 32 | 251 | 61 | 279 | 3.86e-21 | 90.1 |
| Msa0754930 | AT5G39310.1 | 29.515 | 227 | 144 | 9 | 33 | 251 | 94 | 312 | 1.30e-20 | 89.4 |
| Msa0754930 | AT5G39270.1 | 29.915 | 234 | 135 | 11 | 32 | 251 | 61 | 279 | 4.90e-20 | 87.0 |
| Msa0754930 | AT2G45110.1 | 30.702 | 228 | 140 | 8 | 35 | 251 | 39 | 259 | 1.55e-19 | 85.5 |
| Msa0754930 | AT4G01630.1 | 23.282 | 262 | 182 | 8 | 2 | 251 | 1 | 255 | 1.73e-19 | 85.1 |
| Msa0754930 | AT3G60570.2 | 30.415 | 217 | 126 | 10 | 48 | 251 | 5 | 209 | 4.98e-19 | 83.2 |
| Msa0754930 | AT2G20750.2 | 31.122 | 196 | 112 | 7 | 13 | 187 | 11 | 204 | 1.43e-18 | 82.0 |
| Msa0754930 | AT5G56320.1 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 2.06e-18 | 82.4 |
| Msa0754930 | AT5G56320.2 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 2.06e-18 | 82.4 |
| Msa0754930 | AT5G39280.1 | 29.204 | 226 | 147 | 9 | 32 | 251 | 57 | 275 | 4.24e-18 | 81.6 |
| Msa0754930 | AT5G56320.3 | 26.613 | 248 | 163 | 9 | 13 | 248 | 9 | 249 | 5.41e-18 | 82.0 |
| Msa0754930 | AT5G39300.1 | 29.204 | 226 | 147 | 9 | 32 | 251 | 58 | 276 | 7.95e-18 | 80.9 |
| Msa0754930 | AT2G03090.1 | 25.911 | 247 | 168 | 8 | 10 | 248 | 11 | 250 | 1.13e-17 | 80.1 |
| Msa0754930 | AT1G65681.1 | 27.014 | 211 | 142 | 6 | 48 | 251 | 17 | 222 | 1.15e-17 | 79.7 |
| Msa0754930 | AT4G28250.4 | 30.457 | 197 | 115 | 7 | 6 | 188 | 4 | 192 | 1.36e-16 | 76.3 |
| Msa0754930 | AT3G15370.1 | 28.077 | 260 | 144 | 12 | 12 | 248 | 8 | 247 | 2.55e-16 | 76.6 |
| Msa0754930 | AT4G28250.3 | 30.612 | 196 | 114 | 7 | 6 | 187 | 4 | 191 | 3.16e-16 | 75.5 |
| Msa0754930 | AT5G02260.1 | 26.522 | 230 | 152 | 9 | 29 | 248 | 32 | 254 | 1.02e-15 | 74.7 |
| Msa0754930 | AT1G12560.1 | 23.246 | 228 | 161 | 6 | 32 | 251 | 40 | 261 | 6.04e-15 | 72.8 |
| Msa0754930 | AT2G39700.1 | 24.554 | 224 | 152 | 8 | 32 | 245 | 34 | 250 | 8.37e-15 | 72.4 |
| Msa0754930 | AT3G29030.1 | 27.807 | 187 | 127 | 6 | 29 | 213 | 38 | 218 | 1.16e-13 | 68.9 |
| Msa0754930 | AT2G37640.1 | 25.551 | 227 | 152 | 8 | 32 | 248 | 39 | 258 | 1.45e-13 | 68.9 |
| Msa0754930 | AT1G20190.1 | 24.569 | 232 | 153 | 10 | 33 | 251 | 30 | 252 | 5.40e-12 | 64.3 |
| Msa0754930 | AT4G38210.1 | 27.451 | 255 | 154 | 13 | 13 | 248 | 10 | 252 | 4.28e-11 | 62.0 |
| Msa0754930 | AT3G15370.2 | 26.364 | 220 | 125 | 10 | 48 | 248 | 76 | 277 | 7.61e-11 | 61.2 |
Find 72 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTTGGTGCTTAAAATT+AGG | 0.152890 | 5_2:+8671020 | None:intergenic |
| TCCCCGTGGCTATTCAAATT+TGG | 0.158342 | 5_2:-8670117 | Msa0754930:CDS |
| TGGCTATAATATCTTGTTTA+AGG | 0.174105 | 5_2:-8670012 | Msa0754930:CDS |
| AGAAATGCAAAGAATTATTT+AGG | 0.235172 | 5_2:+8671087 | None:intergenic |
| TGCTCTAGAGCAACCTATTA+TGG | 0.246885 | 5_2:-8670939 | Msa0754930:CDS |
| CTTGGATTTGCATAACAATC+TGG | 0.272291 | 5_2:+8670912 | None:intergenic |
| ACAATCTGGGCTACCATAAT+AGG | 0.288543 | 5_2:+8670926 | None:intergenic |
| GCTTGTGGCTATGGTGATTA+TGG | 0.309081 | 5_2:-8670504 | Msa0754930:CDS |
| TACGCATTGGCCTCCATTCT+TGG | 0.310288 | 5_2:+8669803 | None:intergenic |
| ATCTCTAGTGATTGGGAAGC+TGG | 0.319429 | 5_2:-8669670 | Msa0754930:CDS |
| TGACACAAACAAAACCAATT+TGG | 0.321541 | 5_2:+8671006 | None:intergenic |
| GTGGTAGTGCTGGGCTGTAT+TGG | 0.321854 | 5_2:-8669711 | Msa0754930:CDS |
| CCATTCTCGTCACACAATTC+TGG | 0.326522 | 5_2:+8670197 | None:intergenic |
| AAAGTACTTATAGATAGATT+TGG | 0.328977 | 5_2:-8669607 | Msa0754930:three_prime_UTR |
| TGGTAGTGCTGGGCTGTATT+GGG | 0.329472 | 5_2:-8669710 | Msa0754930:CDS |
| CCCCGTGGCTATTCAAATTT+GGG | 0.333249 | 5_2:-8670116 | Msa0754930:CDS |
| AGGCCAATGCGTAGGGCATT+TGG | 0.356145 | 5_2:-8669793 | Msa0754930:CDS |
| CCGATTTCGGTGTGGGAGAT+AGG | 0.376563 | 5_2:-8670157 | Msa0754930:CDS |
| CCTATCTCCCACACCGAAAT+CGG | 0.384864 | 5_2:+8670157 | None:intergenic |
| AGACTGTTATCTCTAGTGAT+TGG | 0.400920 | 5_2:-8669678 | Msa0754930:CDS |
| GCCATTCTTATTCTCTATGT+TGG | 0.402224 | 5_2:-8669957 | Msa0754930:CDS |
| CTCCAAGTGAGTGGTAGTGC+TGG | 0.409157 | 5_2:-8669721 | Msa0754930:CDS |
| TTAGAGGGAGCTTGTGGCTA+TGG | 0.433052 | 5_2:-8670513 | Msa0754930:intron |
| GACTGTTATCTCTAGTGATT+GGG | 0.436426 | 5_2:-8669677 | Msa0754930:CDS |
| CAATTTGTCATTGAACATGA+TGG | 0.445795 | 5_2:-8671045 | Msa0754930:exon |
| AACTTGATCTCACCTCTTGG+AGG | 0.448456 | 5_2:+8669748 | None:intergenic |
| AACAGGAAGATTGCCAAGAA+TGG | 0.466268 | 5_2:-8669816 | Msa0754930:intron |
| ATTCTTATTCTCTATGTTGG+TGG | 0.472042 | 5_2:-8669954 | Msa0754930:CDS |
| TCTCTAGTGATTGGGAAGCT+GGG | 0.472781 | 5_2:-8669669 | Msa0754930:CDS |
| TATGTGGTGGTGACCGATTT+CGG | 0.479504 | 5_2:-8670170 | Msa0754930:CDS |
| TCGCAGGCGTTTCTTCGCTA+TGG | 0.490569 | 5_2:-8670458 | Msa0754930:CDS |
| TCGCTATGGAAGAATGGATC+TGG | 0.490619 | 5_2:-8670444 | Msa0754930:CDS |
| CTCAACTTGATCTCACCTCT+TGG | 0.495730 | 5_2:+8669745 | None:intergenic |
| TTGGATTTGCATAACAATCT+GGG | 0.496289 | 5_2:+8670913 | None:intergenic |
| CCAGAATTGTGTGACGAGAA+TGG | 0.501363 | 5_2:-8670197 | Msa0754930:CDS |
| ATCACTAGAGATAACAGTCT+TGG | 0.514327 | 5_2:+8669681 | None:intergenic |
| CTCTAGTGATTGGGAAGCTG+GGG | 0.520412 | 5_2:-8669668 | Msa0754930:CDS |
| TTATAGCCATTGTATTTGCA+AGG | 0.532628 | 5_2:+8670026 | None:intergenic |
| GCCCAGCACTACCACTCACT+TGG | 0.534848 | 5_2:+8669719 | None:intergenic |
| ACTTGATCTCACCTCTTGGA+GGG | 0.535508 | 5_2:+8669749 | None:intergenic |
| ACCAACATAGAGAATAAGAA+TGG | 0.537864 | 5_2:+8669956 | None:intergenic |
| GCCCAAATTTGAATAGCCAC+GGG | 0.544992 | 5_2:+8670115 | None:intergenic |
| TGCCCAAATTTGAATAGCCA+CGG | 0.546821 | 5_2:+8670114 | None:intergenic |
| GTTCCAAATGCCCTACGCAT+TGG | 0.550110 | 5_2:+8669790 | None:intergenic |
| GTAAATGATGGCAATGTCGC+AGG | 0.552094 | 5_2:-8670474 | Msa0754930:CDS |
| TCCAAGTGAGTGGTAGTGCT+GGG | 0.552324 | 5_2:-8669720 | Msa0754930:CDS |
| GTTTCTTCGCTATGGAAGAA+TGG | 0.552967 | 5_2:-8670450 | Msa0754930:CDS |
| AAGAATGGAGGCCAATGCGT+AGG | 0.554025 | 5_2:-8669801 | Msa0754930:CDS |
| TGGAAGAATGGATCTGGTTG+TGG | 0.555017 | 5_2:-8670438 | Msa0754930:CDS |
| TCTTGAGAGGAACACAAGAC+AGG | 0.557963 | 5_2:+8670972 | None:intergenic |
| AAATTGTCAAAGCACAAAAG+AGG | 0.559026 | 5_2:+8671062 | None:intergenic |
| TATAGCCATTGTATTTGCAA+GGG | 0.561411 | 5_2:+8670027 | None:intergenic |
| GTGGTGACCGATTTCGGTGT+GGG | 0.566642 | 5_2:-8670164 | Msa0754930:CDS |
| AACTGCTGTTCAGTTGTGGC+AGG | 0.569473 | 5_2:-8669919 | Msa0754930:intron |
| ATAAGAATGGCTAAGTAGTG+AGG | 0.575706 | 5_2:+8669969 | None:intergenic |
| AGAATGGAGGCCAATGCGTA+GGG | 0.588746 | 5_2:-8669800 | Msa0754930:CDS |
| TATGGACAGACAGTAAATGA+TGG | 0.603311 | 5_2:-8670486 | Msa0754930:CDS |
| CAGAAGCCAAACACAAGTAG+AGG | 0.606030 | 5_2:+8669502 | None:intergenic |
| TAGTGCTGGGCTGTATTGGG+TGG | 0.610771 | 5_2:-8669707 | Msa0754930:CDS |
| AGGAAGATTGCCAAGAATGG+AGG | 0.614849 | 5_2:-8669813 | Msa0754930:CDS |
| TGACGAGAATGGAGCATATG+TGG | 0.619740 | 5_2:-8670186 | Msa0754930:CDS |
| AGAATCCCTTGCAAATACAA+TGG | 0.620915 | 5_2:-8670032 | Msa0754930:CDS |
| GCAAACAAAAGAGTCTTGAG+AGG | 0.624968 | 5_2:+8670959 | None:intergenic |
| TTTATAGAATGACACAGACC+AGG | 0.643770 | 5_2:+8669558 | None:intergenic |
| ATGTAACTGCTGTTCAGTTG+TGG | 0.651186 | 5_2:-8669923 | Msa0754930:CDS |
| GGTGGTGACCGATTTCGGTG+TGG | 0.653687 | 5_2:-8670165 | Msa0754930:CDS |
| AAGTTGAGGCTCCAAGTGAG+TGG | 0.655665 | 5_2:-8669730 | Msa0754930:CDS |
| GACTTCATCATGAGTCCCCG+TGG | 0.688519 | 5_2:-8670131 | Msa0754930:CDS |
| GATGCAGAGAACCCTCCAAG+AGG | 0.690257 | 5_2:-8669760 | Msa0754930:CDS |
| CCCAAATTTGAATAGCCACG+GGG | 0.693150 | 5_2:+8670116 | None:intergenic |
| CAAGAGGTGAGATCAAGTTG+AGG | 0.697595 | 5_2:-8669744 | Msa0754930:CDS |
| CGAGAATGGAGCATATGTGG+TGG | 0.757236 | 5_2:-8670183 | Msa0754930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATAATGATGAAAT+AGG | - | chr5_2:8670400-8670419 | Msa0754930:intron | 10.0% |
| !! | ATAATAAATAATGATGAAAT+AGG | - | chr5_2:8670400-8670419 | Msa0754930:intron | 10.0% |
| !!! | ATTCAATTTTTATCTCAAAT+TGG | - | chr5_2:8669898-8669917 | Msa0754930:intron | 15.0% |
| !!! | AATATACAACATTTTTTTTC+CGG | - | chr5_2:8670029-8670048 | Msa0754930:CDS | 15.0% |
| !! | TATTAACAATCTCAAAATAA+AGG | + | chr5_2:8670745-8670764 | None:intergenic | 15.0% |
| !! | TAAAAATAACTATGAATAAG+AGG | + | chr5_2:8669509-8669528 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTTATCTCAAAT+TGG | - | chr5_2:8669898-8669917 | Msa0754930:intron | 15.0% |
| !!! | AATATACAACATTTTTTTTC+CGG | - | chr5_2:8670029-8670048 | Msa0754930:CDS | 15.0% |
| !! | TATTAACAATCTCAAAATAA+AGG | + | chr5_2:8670745-8670764 | None:intergenic | 15.0% |
| !! | AGAAATGCAAAGAATTATTT+AGG | + | chr5_2:8669550-8669569 | None:intergenic | 20.0% |
| !! | CACATTTATAAAAATTGACA+GGG | + | chr5_2:8669937-8669956 | None:intergenic | 20.0% |
| !! | ACACATTTATAAAAATTGAC+AGG | + | chr5_2:8669938-8669957 | None:intergenic | 20.0% |
| !! | TACATTTCTTGAAATTGAAT+TGG | - | chr5_2:8670774-8670793 | Msa0754930:intron | 20.0% |
| !! | ACATTTCTTGAAATTGAATT+GGG | - | chr5_2:8670775-8670794 | Msa0754930:intron | 20.0% |
| !!! | AAAGTACTTATAGATAGATT+TGG | - | chr5_2:8671027-8671046 | Msa0754930:CDS | 20.0% |
| !! | AGAAATGCAAAGAATTATTT+AGG | + | chr5_2:8669550-8669569 | None:intergenic | 20.0% |
| !! | CACATTTATAAAAATTGACA+GGG | + | chr5_2:8669937-8669956 | None:intergenic | 20.0% |
| !! | ACACATTTATAAAAATTGAC+AGG | + | chr5_2:8669938-8669957 | None:intergenic | 20.0% |
| !! | TACATTTCTTGAAATTGAAT+TGG | - | chr5_2:8670774-8670793 | Msa0754930:intron | 20.0% |
| !! | ACATTTCTTGAAATTGAATT+GGG | - | chr5_2:8670775-8670794 | Msa0754930:intron | 20.0% |
| !!! | AAAGTACTTATAGATAGATT+TGG | - | chr5_2:8671027-8671046 | Msa0754930:CDS | 20.0% |
| !! | CATTGAATCGGTTTATAAAT+CGG | + | chr5_2:8670005-8670024 | None:intergenic | 25.0% |
| ! | TGTATATTGTCTCATTGAAT+CGG | + | chr5_2:8670017-8670036 | None:intergenic | 25.0% |
| ! | CATAAAATACATAATCTGAG+TGG | - | chr5_2:8670085-8670104 | Msa0754930:CDS | 25.0% |
| !! | AACTAATTGTTAGTTGATGT+TGG | + | chr5_2:8670369-8670388 | None:intergenic | 25.0% |
| ! | AAATAATGATGAAATAGGTG+AGG | - | chr5_2:8670405-8670424 | Msa0754930:intron | 25.0% |
| ! | TATTCAAATTTGGGCAAAAA+TGG | - | chr5_2:8670527-8670546 | Msa0754930:intron | 25.0% |
| !! | TCTGCAGAACTTTTTAAATA+TGG | - | chr5_2:8670557-8670576 | Msa0754930:intron | 25.0% |
| !! | AGAACTTTTTAAATATGGTG+TGG | - | chr5_2:8670562-8670581 | Msa0754930:intron | 25.0% |
| !! | TGGCTATAATATCTTGTTTA+AGG | - | chr5_2:8670622-8670641 | Msa0754930:intron | 25.0% |
| !! | CATTGAATCGGTTTATAAAT+CGG | + | chr5_2:8670005-8670024 | None:intergenic | 25.0% |
| ! | TGTATATTGTCTCATTGAAT+CGG | + | chr5_2:8670017-8670036 | None:intergenic | 25.0% |
| ! | CATAAAATACATAATCTGAG+TGG | - | chr5_2:8670085-8670104 | Msa0754930:CDS | 25.0% |
| !! | AACTAATTGTTAGTTGATGT+TGG | + | chr5_2:8670369-8670388 | None:intergenic | 25.0% |
| ! | AAATAATGATGAAATAGGTG+AGG | - | chr5_2:8670405-8670424 | Msa0754930:intron | 25.0% |
| ! | TATTCAAATTTGGGCAAAAA+TGG | - | chr5_2:8670527-8670546 | Msa0754930:intron | 25.0% |
| !! | TCTGCAGAACTTTTTAAATA+TGG | - | chr5_2:8670557-8670576 | Msa0754930:intron | 25.0% |
| !! | AGAACTTTTTAAATATGGTG+TGG | - | chr5_2:8670562-8670581 | Msa0754930:intron | 25.0% |
| !! | TGGCTATAATATCTTGTTTA+AGG | - | chr5_2:8670622-8670641 | Msa0754930:intron | 25.0% |
| AAATTGTCAAAGCACAAAAG+AGG | + | chr5_2:8669575-8669594 | None:intergenic | 30.0% | |
| CAATTTGTCATTGAACATGA+TGG | - | chr5_2:8669589-8669608 | Msa0754930:three_prime_UTR | 30.0% | |
| !! | CCAATTTGGTGCTTAAAATT+AGG | + | chr5_2:8669617-8669636 | None:intergenic | 30.0% |
| ! | CCTAATTTTAAGCACCAAAT+TGG | - | chr5_2:8669614-8669633 | Msa0754930:three_prime_UTR | 30.0% |
| TGACACAAACAAAACCAATT+TGG | + | chr5_2:8669631-8669650 | None:intergenic | 30.0% | |
| TTGGATTTGCATAACAATCT+GGG | + | chr5_2:8669724-8669743 | None:intergenic | 30.0% | |
| ATTAGTAGAAGACACTTACT+TGG | + | chr5_2:8669743-8669762 | None:intergenic | 30.0% | |
| !!! | GATTGTTGTGCACATTTTTT+AGG | - | chr5_2:8669961-8669980 | Msa0754930:CDS | 30.0% |
| ! | ACTTTTTAAATATGGTGTGG+TGG | - | chr5_2:8670565-8670584 | Msa0754930:intron | 30.0% |
| TATAGCCATTGTATTTGCAA+GGG | + | chr5_2:8670610-8670629 | None:intergenic | 30.0% | |
| TTATAGCCATTGTATTTGCA+AGG | + | chr5_2:8670611-8670630 | None:intergenic | 30.0% | |
| ACCAACATAGAGAATAAGAA+TGG | + | chr5_2:8670681-8670700 | None:intergenic | 30.0% | |
| ATTCTTATTCTCTATGTTGG+TGG | - | chr5_2:8670680-8670699 | Msa0754930:intron | 30.0% | |
| TGAATTGGGTTTACTTGAAA+TGG | - | chr5_2:8670789-8670808 | Msa0754930:intron | 30.0% | |
| AAATTGTCAAAGCACAAAAG+AGG | + | chr5_2:8669575-8669594 | None:intergenic | 30.0% | |
| CAATTTGTCATTGAACATGA+TGG | - | chr5_2:8669589-8669608 | Msa0754930:three_prime_UTR | 30.0% | |
| !! | CCAATTTGGTGCTTAAAATT+AGG | + | chr5_2:8669617-8669636 | None:intergenic | 30.0% |
| ! | CCTAATTTTAAGCACCAAAT+TGG | - | chr5_2:8669614-8669633 | Msa0754930:three_prime_UTR | 30.0% |
| TGACACAAACAAAACCAATT+TGG | + | chr5_2:8669631-8669650 | None:intergenic | 30.0% | |
| TTGGATTTGCATAACAATCT+GGG | + | chr5_2:8669724-8669743 | None:intergenic | 30.0% | |
| ATTAGTAGAAGACACTTACT+TGG | + | chr5_2:8669743-8669762 | None:intergenic | 30.0% | |
| !!! | GATTGTTGTGCACATTTTTT+AGG | - | chr5_2:8669961-8669980 | Msa0754930:CDS | 30.0% |
| ! | ACTTTTTAAATATGGTGTGG+TGG | - | chr5_2:8670565-8670584 | Msa0754930:intron | 30.0% |
| TATAGCCATTGTATTTGCAA+GGG | + | chr5_2:8670610-8670629 | None:intergenic | 30.0% | |
| TTATAGCCATTGTATTTGCA+AGG | + | chr5_2:8670611-8670630 | None:intergenic | 30.0% | |
| ACCAACATAGAGAATAAGAA+TGG | + | chr5_2:8670681-8670700 | None:intergenic | 30.0% | |
| ATTCTTATTCTCTATGTTGG+TGG | - | chr5_2:8670680-8670699 | Msa0754930:intron | 30.0% | |
| TGAATTGGGTTTACTTGAAA+TGG | - | chr5_2:8670789-8670808 | Msa0754930:intron | 30.0% | |
| CTTGGATTTGCATAACAATC+TGG | + | chr5_2:8669725-8669744 | None:intergenic | 35.0% | |
| AAAAATTGACAGGGTTGAGT+AGG | + | chr5_2:8669928-8669947 | None:intergenic | 35.0% | |
| ACCTAGACATTGCATTACTT+TGG | - | chr5_2:8670055-8670074 | Msa0754930:CDS | 35.0% | |
| !! | TGGCTATTAACCTGTTTTAG+AGG | - | chr5_2:8670105-8670124 | Msa0754930:CDS | 35.0% |
| !! | GGCTATTAACCTGTTTTAGA+GGG | - | chr5_2:8670106-8670125 | Msa0754930:CDS | 35.0% |
| TATGGACAGACAGTAAATGA+TGG | - | chr5_2:8670148-8670167 | Msa0754930:CDS | 35.0% | |
| AGAATCCCTTGCAAATACAA+TGG | - | chr5_2:8670602-8670621 | Msa0754930:intron | 35.0% | |
| ATAAGAATGGCTAAGTAGTG+AGG | + | chr5_2:8670668-8670687 | None:intergenic | 35.0% | |
| GCCATTCTTATTCTCTATGT+TGG | - | chr5_2:8670677-8670696 | Msa0754930:intron | 35.0% | |
| GGGTTTACTTGAAATGGTAA+TGG | - | chr5_2:8670795-8670814 | Msa0754930:intron | 35.0% | |
| !! | ACTTGAAATGGTAATGGAAC+AGG | - | chr5_2:8670801-8670820 | Msa0754930:intron | 35.0% |
| ATCACTAGAGATAACAGTCT+TGG | + | chr5_2:8670956-8670975 | None:intergenic | 35.0% | |
| AGACTGTTATCTCTAGTGAT+TGG | - | chr5_2:8670956-8670975 | Msa0754930:CDS | 35.0% | |
| GACTGTTATCTCTAGTGATT+GGG | - | chr5_2:8670957-8670976 | Msa0754930:CDS | 35.0% | |
| TTTATAGAATGACACAGACC+AGG | + | chr5_2:8671079-8671098 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTCTACTTGTGTT+TGG | - | chr5_2:8671126-8671145 | Msa0754930:five_prime_UTR | 35.0% |
| CTTGGATTTGCATAACAATC+TGG | + | chr5_2:8669725-8669744 | None:intergenic | 35.0% | |
| AAAAATTGACAGGGTTGAGT+AGG | + | chr5_2:8669928-8669947 | None:intergenic | 35.0% | |
| ACCTAGACATTGCATTACTT+TGG | - | chr5_2:8670055-8670074 | Msa0754930:CDS | 35.0% | |
| !! | TGGCTATTAACCTGTTTTAG+AGG | - | chr5_2:8670105-8670124 | Msa0754930:CDS | 35.0% |
| !! | GGCTATTAACCTGTTTTAGA+GGG | - | chr5_2:8670106-8670125 | Msa0754930:CDS | 35.0% |
| TATGGACAGACAGTAAATGA+TGG | - | chr5_2:8670148-8670167 | Msa0754930:CDS | 35.0% | |
| AGAATCCCTTGCAAATACAA+TGG | - | chr5_2:8670602-8670621 | Msa0754930:intron | 35.0% | |
| ATAAGAATGGCTAAGTAGTG+AGG | + | chr5_2:8670668-8670687 | None:intergenic | 35.0% | |
| GCCATTCTTATTCTCTATGT+TGG | - | chr5_2:8670677-8670696 | Msa0754930:intron | 35.0% | |
| GGGTTTACTTGAAATGGTAA+TGG | - | chr5_2:8670795-8670814 | Msa0754930:intron | 35.0% | |
| !! | ACTTGAAATGGTAATGGAAC+AGG | - | chr5_2:8670801-8670820 | Msa0754930:intron | 35.0% |
| ATCACTAGAGATAACAGTCT+TGG | + | chr5_2:8670956-8670975 | None:intergenic | 35.0% | |
| AGACTGTTATCTCTAGTGAT+TGG | - | chr5_2:8670956-8670975 | Msa0754930:CDS | 35.0% | |
| GACTGTTATCTCTAGTGATT+GGG | - | chr5_2:8670957-8670976 | Msa0754930:CDS | 35.0% | |
| TTTATAGAATGACACAGACC+AGG | + | chr5_2:8671079-8671098 | None:intergenic | 35.0% | |
| ! | TTTTCTCCTCTACTTGTGTT+TGG | - | chr5_2:8671126-8671145 | Msa0754930:five_prime_UTR | 35.0% |
| GCAAACAAAAGAGTCTTGAG+AGG | + | chr5_2:8669678-8669697 | None:intergenic | 40.0% | |
| !! | TGCTCTAGAGCAACCTATTA+TGG | - | chr5_2:8669695-8669714 | Msa0754930:CDS | 40.0% |
| ACAATCTGGGCTACCATAAT+AGG | + | chr5_2:8669711-8669730 | None:intergenic | 40.0% | |
| AATGCAATGTCTAGGTTCAC+CGG | + | chr5_2:8670051-8670070 | None:intergenic | 40.0% | |
| GCCAAAGTAATGCAATGTCT+AGG | + | chr5_2:8670059-8670078 | None:intergenic | 40.0% | |
| GTTTCTTCGCTATGGAAGAA+TGG | - | chr5_2:8670184-8670203 | Msa0754930:CDS | 40.0% | |
| TGCCCAAATTTGAATAGCCA+CGG | + | chr5_2:8670523-8670542 | None:intergenic | 40.0% | |
| ATGTAACTGCTGTTCAGTTG+TGG | - | chr5_2:8670711-8670730 | Msa0754930:intron | 40.0% | |
| AACAGGAAGATTGCCAAGAA+TGG | - | chr5_2:8670818-8670837 | Msa0754930:intron | 40.0% | |
| ! | GACTAGTGTTTTACTGTTCC+TGG | - | chr5_2:8671058-8671077 | Msa0754930:five_prime_UTR | 40.0% |
| GCAAACAAAAGAGTCTTGAG+AGG | + | chr5_2:8669678-8669697 | None:intergenic | 40.0% | |
| !! | TGCTCTAGAGCAACCTATTA+TGG | - | chr5_2:8669695-8669714 | Msa0754930:CDS | 40.0% |
| ACAATCTGGGCTACCATAAT+AGG | + | chr5_2:8669711-8669730 | None:intergenic | 40.0% | |
| AATGCAATGTCTAGGTTCAC+CGG | + | chr5_2:8670051-8670070 | None:intergenic | 40.0% | |
| GCCAAAGTAATGCAATGTCT+AGG | + | chr5_2:8670059-8670078 | None:intergenic | 40.0% | |
| GTTTCTTCGCTATGGAAGAA+TGG | - | chr5_2:8670184-8670203 | Msa0754930:CDS | 40.0% | |
| TGCCCAAATTTGAATAGCCA+CGG | + | chr5_2:8670523-8670542 | None:intergenic | 40.0% | |
| ATGTAACTGCTGTTCAGTTG+TGG | - | chr5_2:8670711-8670730 | Msa0754930:intron | 40.0% | |
| AACAGGAAGATTGCCAAGAA+TGG | - | chr5_2:8670818-8670837 | Msa0754930:intron | 40.0% | |
| ! | GACTAGTGTTTTACTGTTCC+TGG | - | chr5_2:8671058-8671077 | Msa0754930:five_prime_UTR | 40.0% |
| TCTTGAGAGGAACACAAGAC+AGG | + | chr5_2:8669665-8669684 | None:intergenic | 45.0% | |
| GCTTGTGGCTATGGTGATTA+TGG | - | chr5_2:8670130-8670149 | Msa0754930:CDS | 45.0% | |
| GTAAATGATGGCAATGTCGC+AGG | - | chr5_2:8670160-8670179 | Msa0754930:CDS | 45.0% | |
| TCGCTATGGAAGAATGGATC+TGG | - | chr5_2:8670190-8670209 | Msa0754930:CDS | 45.0% | |
| TGGAAGAATGGATCTGGTTG+TGG | - | chr5_2:8670196-8670215 | Msa0754930:CDS | 45.0% | |
| CCATTCTCGTCACACAATTC+TGG | + | chr5_2:8670440-8670459 | None:intergenic | 45.0% | |
| CCAGAATTGTGTGACGAGAA+TGG | - | chr5_2:8670437-8670456 | Msa0754930:CDS | 45.0% | |
| TGACGAGAATGGAGCATATG+TGG | - | chr5_2:8670448-8670467 | Msa0754930:CDS | 45.0% | |
| ! | TATGTGGTGGTGACCGATTT+CGG | - | chr5_2:8670464-8670483 | Msa0754930:CDS | 45.0% |
| TCCCCGTGGCTATTCAAATT+TGG | - | chr5_2:8670517-8670536 | Msa0754930:intron | 45.0% | |
| CCCAAATTTGAATAGCCACG+GGG | + | chr5_2:8670521-8670540 | None:intergenic | 45.0% | |
| CCCCGTGGCTATTCAAATTT+GGG | - | chr5_2:8670518-8670537 | Msa0754930:intron | 45.0% | |
| GCCCAAATTTGAATAGCCAC+GGG | + | chr5_2:8670522-8670541 | None:intergenic | 45.0% | |
| ! | GAGGATTTTTGCTGCGTTCA+TGG | + | chr5_2:8670649-8670668 | None:intergenic | 45.0% |
| AGGAAGATTGCCAAGAATGG+AGG | - | chr5_2:8670821-8670840 | Msa0754930:intron | 45.0% | |
| ACTTGATCTCACCTCTTGGA+GGG | + | chr5_2:8670888-8670907 | None:intergenic | 45.0% | |
| AACTTGATCTCACCTCTTGG+AGG | + | chr5_2:8670889-8670908 | None:intergenic | 45.0% | |
| CTCAACTTGATCTCACCTCT+TGG | + | chr5_2:8670892-8670911 | None:intergenic | 45.0% | |
| ! | CAAGAGGTGAGATCAAGTTG+AGG | - | chr5_2:8670890-8670909 | Msa0754930:intron | 45.0% |
| ATCTCTAGTGATTGGGAAGC+TGG | - | chr5_2:8670964-8670983 | Msa0754930:CDS | 45.0% | |
| TCTCTAGTGATTGGGAAGCT+GGG | - | chr5_2:8670965-8670984 | Msa0754930:CDS | 45.0% | |
| TCTTGAGAGGAACACAAGAC+AGG | + | chr5_2:8669665-8669684 | None:intergenic | 45.0% | |
| GCTTGTGGCTATGGTGATTA+TGG | - | chr5_2:8670130-8670149 | Msa0754930:CDS | 45.0% | |
| GTAAATGATGGCAATGTCGC+AGG | - | chr5_2:8670160-8670179 | Msa0754930:CDS | 45.0% | |
| TCGCTATGGAAGAATGGATC+TGG | - | chr5_2:8670190-8670209 | Msa0754930:CDS | 45.0% | |
| TGGAAGAATGGATCTGGTTG+TGG | - | chr5_2:8670196-8670215 | Msa0754930:CDS | 45.0% | |
| CCATTCTCGTCACACAATTC+TGG | + | chr5_2:8670440-8670459 | None:intergenic | 45.0% | |
| CCAGAATTGTGTGACGAGAA+TGG | - | chr5_2:8670437-8670456 | Msa0754930:CDS | 45.0% | |
| TGACGAGAATGGAGCATATG+TGG | - | chr5_2:8670448-8670467 | Msa0754930:CDS | 45.0% | |
| ! | TATGTGGTGGTGACCGATTT+CGG | - | chr5_2:8670464-8670483 | Msa0754930:CDS | 45.0% |
| TCCCCGTGGCTATTCAAATT+TGG | - | chr5_2:8670517-8670536 | Msa0754930:intron | 45.0% | |
| CCCAAATTTGAATAGCCACG+GGG | + | chr5_2:8670521-8670540 | None:intergenic | 45.0% | |
| CCCCGTGGCTATTCAAATTT+GGG | - | chr5_2:8670518-8670537 | Msa0754930:intron | 45.0% | |
| GCCCAAATTTGAATAGCCAC+GGG | + | chr5_2:8670522-8670541 | None:intergenic | 45.0% | |
| ! | GAGGATTTTTGCTGCGTTCA+TGG | + | chr5_2:8670649-8670668 | None:intergenic | 45.0% |
| AGGAAGATTGCCAAGAATGG+AGG | - | chr5_2:8670821-8670840 | Msa0754930:intron | 45.0% | |
| ACTTGATCTCACCTCTTGGA+GGG | + | chr5_2:8670888-8670907 | None:intergenic | 45.0% | |
| AACTTGATCTCACCTCTTGG+AGG | + | chr5_2:8670889-8670908 | None:intergenic | 45.0% | |
| CTCAACTTGATCTCACCTCT+TGG | + | chr5_2:8670892-8670911 | None:intergenic | 45.0% | |
| ! | CAAGAGGTGAGATCAAGTTG+AGG | - | chr5_2:8670890-8670909 | Msa0754930:intron | 45.0% |
| ATCTCTAGTGATTGGGAAGC+TGG | - | chr5_2:8670964-8670983 | Msa0754930:CDS | 45.0% | |
| TCTCTAGTGATTGGGAAGCT+GGG | - | chr5_2:8670965-8670984 | Msa0754930:CDS | 45.0% | |
| !! | TTAAGTAATATATATTATAA+AGG | - | chr5_2:8670333-8670352 | Msa0754930:intron | 5.0% |
| !! | TTAAGTAATATATATTATAA+AGG | - | chr5_2:8670333-8670352 | Msa0754930:intron | 5.0% |
| !! | CCACAAGCTCCCTCTAAAAC+AGG | + | chr5_2:8670118-8670137 | None:intergenic | 50.0% |
| !!! | CCTGTTTTAGAGGGAGCTTG+TGG | - | chr5_2:8670115-8670134 | Msa0754930:CDS | 50.0% |
| TTAGAGGGAGCTTGTGGCTA+TGG | - | chr5_2:8670121-8670140 | Msa0754930:CDS | 50.0% | |
| CGAGAATGGAGCATATGTGG+TGG | - | chr5_2:8670451-8670470 | Msa0754930:CDS | 50.0% | |
| CCTATCTCCCACACCGAAAT+CGG | + | chr5_2:8670480-8670499 | None:intergenic | 50.0% | |
| AACTGCTGTTCAGTTGTGGC+AGG | - | chr5_2:8670715-8670734 | Msa0754930:intron | 50.0% | |
| ! | TACGCATTGGCCTCCATTCT+TGG | + | chr5_2:8670834-8670853 | None:intergenic | 50.0% |
| AAGAATGGAGGCCAATGCGT+AGG | - | chr5_2:8670833-8670852 | Msa0754930:intron | 50.0% | |
| AGAATGGAGGCCAATGCGTA+GGG | - | chr5_2:8670834-8670853 | Msa0754930:intron | 50.0% | |
| GTTCCAAATGCCCTACGCAT+TGG | + | chr5_2:8670847-8670866 | None:intergenic | 50.0% | |
| AAGTTGAGGCTCCAAGTGAG+TGG | - | chr5_2:8670904-8670923 | Msa0754930:intron | 50.0% | |
| ! | TCCAAGTGAGTGGTAGTGCT+GGG | - | chr5_2:8670914-8670933 | Msa0754930:CDS | 50.0% |
| ! | TGGTAGTGCTGGGCTGTATT+GGG | - | chr5_2:8670924-8670943 | Msa0754930:CDS | 50.0% |
| CTCTAGTGATTGGGAAGCTG+GGG | - | chr5_2:8670966-8670985 | Msa0754930:CDS | 50.0% | |
| !! | CCACAAGCTCCCTCTAAAAC+AGG | + | chr5_2:8670118-8670137 | None:intergenic | 50.0% |
| !!! | CCTGTTTTAGAGGGAGCTTG+TGG | - | chr5_2:8670115-8670134 | Msa0754930:CDS | 50.0% |
| TTAGAGGGAGCTTGTGGCTA+TGG | - | chr5_2:8670121-8670140 | Msa0754930:CDS | 50.0% | |
| CGAGAATGGAGCATATGTGG+TGG | - | chr5_2:8670451-8670470 | Msa0754930:CDS | 50.0% | |
| CCTATCTCCCACACCGAAAT+CGG | + | chr5_2:8670480-8670499 | None:intergenic | 50.0% | |
| AACTGCTGTTCAGTTGTGGC+AGG | - | chr5_2:8670715-8670734 | Msa0754930:intron | 50.0% | |
| ! | TACGCATTGGCCTCCATTCT+TGG | + | chr5_2:8670834-8670853 | None:intergenic | 50.0% |
| AAGAATGGAGGCCAATGCGT+AGG | - | chr5_2:8670833-8670852 | Msa0754930:intron | 50.0% | |
| AGAATGGAGGCCAATGCGTA+GGG | - | chr5_2:8670834-8670853 | Msa0754930:intron | 50.0% | |
| GTTCCAAATGCCCTACGCAT+TGG | + | chr5_2:8670847-8670866 | None:intergenic | 50.0% | |
| AAGTTGAGGCTCCAAGTGAG+TGG | - | chr5_2:8670904-8670923 | Msa0754930:intron | 50.0% | |
| ! | TCCAAGTGAGTGGTAGTGCT+GGG | - | chr5_2:8670914-8670933 | Msa0754930:CDS | 50.0% |
| ! | TGGTAGTGCTGGGCTGTATT+GGG | - | chr5_2:8670924-8670943 | Msa0754930:CDS | 50.0% |
| CTCTAGTGATTGGGAAGCTG+GGG | - | chr5_2:8670966-8670985 | Msa0754930:CDS | 50.0% | |
| TCGCAGGCGTTTCTTCGCTA+TGG | - | chr5_2:8670176-8670195 | Msa0754930:CDS | 55.0% | |
| ! | GTGGTGACCGATTTCGGTGT+GGG | - | chr5_2:8670470-8670489 | Msa0754930:CDS | 55.0% |
| ! | CCGATTTCGGTGTGGGAGAT+AGG | - | chr5_2:8670477-8670496 | Msa0754930:CDS | 55.0% |
| GACTTCATCATGAGTCCCCG+TGG | - | chr5_2:8670503-8670522 | Msa0754930:CDS | 55.0% | |
| ! | AGGCCAATGCGTAGGGCATT+TGG | - | chr5_2:8670841-8670860 | Msa0754930:intron | 55.0% |
| GATGCAGAGAACCCTCCAAG+AGG | - | chr5_2:8670874-8670893 | Msa0754930:intron | 55.0% | |
| ! | CTCCAAGTGAGTGGTAGTGC+TGG | - | chr5_2:8670913-8670932 | Msa0754930:CDS | 55.0% |
| ! | GTGGTAGTGCTGGGCTGTAT+TGG | - | chr5_2:8670923-8670942 | Msa0754930:CDS | 55.0% |
| ! | TAGTGCTGGGCTGTATTGGG+TGG | - | chr5_2:8670927-8670946 | Msa0754930:CDS | 55.0% |
| TCGCAGGCGTTTCTTCGCTA+TGG | - | chr5_2:8670176-8670195 | Msa0754930:CDS | 55.0% | |
| ! | GTGGTGACCGATTTCGGTGT+GGG | - | chr5_2:8670470-8670489 | Msa0754930:CDS | 55.0% |
| ! | CCGATTTCGGTGTGGGAGAT+AGG | - | chr5_2:8670477-8670496 | Msa0754930:CDS | 55.0% |
| GACTTCATCATGAGTCCCCG+TGG | - | chr5_2:8670503-8670522 | Msa0754930:CDS | 55.0% | |
| ! | AGGCCAATGCGTAGGGCATT+TGG | - | chr5_2:8670841-8670860 | Msa0754930:intron | 55.0% |
| GATGCAGAGAACCCTCCAAG+AGG | - | chr5_2:8670874-8670893 | Msa0754930:intron | 55.0% | |
| ! | CTCCAAGTGAGTGGTAGTGC+TGG | - | chr5_2:8670913-8670932 | Msa0754930:CDS | 55.0% |
| ! | GTGGTAGTGCTGGGCTGTAT+TGG | - | chr5_2:8670923-8670942 | Msa0754930:CDS | 55.0% |
| ! | TAGTGCTGGGCTGTATTGGG+TGG | - | chr5_2:8670927-8670946 | Msa0754930:CDS | 55.0% |
| ! | GGTGGTGACCGATTTCGGTG+TGG | - | chr5_2:8670469-8670488 | Msa0754930:CDS | 60.0% |
| GCCCAGCACTACCACTCACT+TGG | + | chr5_2:8670918-8670937 | None:intergenic | 60.0% | |
| ! | GGTGGTGACCGATTTCGGTG+TGG | - | chr5_2:8670469-8670488 | Msa0754930:CDS | 60.0% |
| GCCCAGCACTACCACTCACT+TGG | + | chr5_2:8670918-8670937 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8669507 | 8671149 | 8669507 | ID=Msa0754930;Name=Msa0754930 |
| chr5_2 | mRNA | 8669507 | 8671149 | 8669507 | ID=Msa0754930-mRNA-1;Parent=Msa0754930;Name=Msa0754930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=98|1|1|1|1|1|4|129|252 |
| chr5_2 | exon | 8669507 | 8669833 | 8669507 | ID=Msa0754930-mRNA-1:exon:3953;Parent=Msa0754930-mRNA-1 |
| chr5_2 | exon | 8669920 | 8670234 | 8669920 | ID=Msa0754930-mRNA-1:exon:3952;Parent=Msa0754930-mRNA-1 |
| chr5_2 | exon | 8670425 | 8670531 | 8670425 | ID=Msa0754930-mRNA-1:exon:3951;Parent=Msa0754930-mRNA-1 |
| chr5_2 | exon | 8670913 | 8671149 | 8670913 | ID=Msa0754930-mRNA-1:exon:3950;Parent=Msa0754930-mRNA-1 |
| chr5_2 | five_prime_UTR | 8671052 | 8671149 | 8671052 | ID=Msa0754930-mRNA-1:five_prime_utr;Parent=Msa0754930-mRNA-1 |
| chr5_2 | CDS | 8670913 | 8671051 | 8670913 | ID=Msa0754930-mRNA-1:cds;Parent=Msa0754930-mRNA-1 |
| chr5_2 | CDS | 8670425 | 8670531 | 8670425 | ID=Msa0754930-mRNA-1:cds;Parent=Msa0754930-mRNA-1 |
| chr5_2 | CDS | 8669920 | 8670234 | 8669920 | ID=Msa0754930-mRNA-1:cds;Parent=Msa0754930-mRNA-1 |
| chr5_2 | CDS | 8669636 | 8669833 | 8669636 | ID=Msa0754930-mRNA-1:cds;Parent=Msa0754930-mRNA-1 |
| chr5_2 | three_prime_UTR | 8669507 | 8669635 | 8669507 | ID=Msa0754930-mRNA-1:three_prime_utr;Parent=Msa0754930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
