AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1410690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410690 MtrunA17_Chr1g0197481 99.060 851 8 0 1 851 1 851 0.0 1711
Msa1410690 MtrunA17_Chr4g0027771 51.297 347 142 9 514 851 490 818 3.15e-96 319
Msa1410690 MtrunA17_Chr4g0027771 48.711 349 166 7 110 450 1 344 2.36e-70 248
Msa1410690 MtrunA17_Chr2g0320491 48.907 366 154 7 513 850 475 835 1.45e-92 310
Msa1410690 MtrunA17_Chr2g0320491 44.476 353 163 9 110 453 1 329 2.40e-57 211
Msa1410690 MtrunA17_Chr2g0292551 51.385 325 129 7 540 844 415 730 6.50e-84 285
Msa1410690 MtrunA17_Chr2g0292551 42.920 226 106 7 233 453 62 269 1.06e-30 129
Msa1410690 MtrunA17_Chr2g0296581 41.606 137 65 4 714 848 789 912 1.21e-19 94.7
Msa1410690 MtrunA17_Chr4g0052941 35.433 127 70 1 723 849 701 815 2.22e-16 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1410690 AT5G04460.6 63.647 883 269 17 1 851 1 863 0.0 970
Msa1410690 AT5G04460.3 63.647 883 269 17 1 851 1 863 0.0 970
Msa1410690 AT5G04460.1 63.647 883 269 17 1 851 1 863 0.0 970
Msa1410690 AT5G04460.4 63.647 883 269 17 1 851 1 863 0.0 970
Msa1410690 AT5G04460.2 62.604 845 264 17 1 813 1 825 0.0 886
Msa1410690 AT5G04460.5 60.132 755 249 17 1 723 1 735 0.0 721
Msa1410690 AT2G27950.2 44.809 366 178 8 491 851 493 839 1.26e-87 296
Msa1410690 AT2G27950.2 47.354 359 180 7 110 462 1 356 6.83e-72 253
Msa1410690 AT2G27950.3 44.809 366 178 8 491 851 493 839 1.26e-87 296
Msa1410690 AT2G27950.3 47.354 359 180 7 110 462 1 356 6.83e-72 253
Msa1410690 AT2G27950.1 44.809 366 178 8 491 851 493 839 1.26e-87 296
Msa1410690 AT2G27950.1 47.354 359 180 7 110 462 1 356 6.83e-72 253
Msa1410690 AT2G34920.2 32.479 234 114 5 616 848 471 661 4.93e-30 127
Msa1410690 AT2G34920.2 33.987 153 94 2 342 488 202 353 1.29e-11 68.9
Msa1410690 AT4G20160.3 31.250 272 113 7 616 848 972 1208 4.32e-27 119
Msa1410690 AT4G20160.2 31.250 272 113 7 616 848 974 1210 4.40e-27 119
Msa1410690 AT2G34920.1 30.342 234 105 5 616 848 471 647 1.28e-24 110
Msa1410690 AT2G34920.1 33.987 153 94 2 342 488 202 353 1.52e-11 68.6
Msa1410690 AT1G30860.1 29.958 237 133 5 616 847 516 724 3.59e-21 99.8

Find 287 sgRNAs with CRISPR-Local

Find 492 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGATTTGTAAAGAATAAT+TGG 0.151176 tig0023698:-11861 None:intergenic
AACCTCACTGATTGTATAAT+TGG 0.163159 tig0023698:+11786 Msa1410690:three_prime_UTR
CAGGAACAAATTACCGAAAA+TGG 0.178911 tig0023698:+9444 Msa1410690:CDS
ATCATCCCCAGCTGAATTTC+TGG 0.185086 tig0023698:-9553 None:intergenic
CATCTGATGATGGGTCTAAA+TGG 0.211482 tig0023698:+11347 Msa1410690:CDS
ATCTGTGGTTGGTGTTTCTT+TGG 0.227299 tig0023698:-6853 None:intergenic
AAGTGAGAATCGAGGGAGTT+TGG 0.245877 tig0023698:+6634 Msa1410690:CDS
CTAGCTTCTTGCCAATTAAT+AGG 0.252216 tig0023698:-9402 None:intergenic
CACTGGAAGCTCAAAGAATT+TGG 0.256474 tig0023698:+9583 Msa1410690:CDS
AGTGAGAATCGAGGGAGTTT+GGG 0.261674 tig0023698:+6635 Msa1410690:CDS
TGCTCATCGCAATCGTATTC+AGG 0.269456 tig0023698:+7177 Msa1410690:CDS
CAAATGTTGGTTTAGCAATT+CGG 0.285331 tig0023698:+5956 Msa1410690:five_prime_UTR
ATTTGAATTTCAATTTCATT+AGG 0.285448 tig0023698:+5816 Msa1410690:five_prime_UTR
CTCTAGTTGATTTGCTTGTT+AGG 0.288787 tig0023698:+7092 Msa1410690:CDS
AACCGCTCAGCTGGTGAAAA+TGG 0.300085 tig0023698:+11129 Msa1410690:CDS
GCACAAGTGAACCTATTAAT+TGG 0.305040 tig0023698:+9391 Msa1410690:CDS
CGTTCATCACCCTGCTGATC+AGG 0.309076 tig0023698:-10244 None:intergenic
GAGCAGATGGGCTGCCCGAC+AGG 0.311868 tig0023698:+6304 Msa1410690:CDS
CACCGGTGAAGGTCTGTTAA+TGG 0.321005 tig0023698:-10287 None:intergenic
AATCTATTGAACCTTCTAAA+AGG 0.326333 tig0023698:-9684 None:intergenic
GCATATTCCATACTGTAAAA+AGG 0.330394 tig0023698:+11642 Msa1410690:exon
AACTGGCCGCAGAGAATTAA+TGG 0.330937 tig0023698:+9474 Msa1410690:CDS
TTTGAATTTCAATTTCATTA+GGG 0.338703 tig0023698:+5817 Msa1410690:five_prime_UTR
CATCTATGAGATTGTTTGAT+TGG 0.338833 tig0023698:-9278 None:intergenic
CATCTTCAACAGTTTCGTTT+CGG 0.346165 tig0023698:-8329 None:intergenic
GAATCTCTCGGAAACCAAAA+AGG 0.351178 tig0023698:-5928 None:intergenic
GAATGAGCATCAGCAGATTC+AGG 0.353172 tig0023698:-6080 None:intergenic
TGACTTTATGCGTGGTCATT+TGG 0.355803 tig0023698:+6124 Msa1410690:CDS
GAGCTTGTTAATCTCAGTTC+TGG 0.356267 tig0023698:+11701 Msa1410690:three_prime_UTR
TCTGAGTTGATGGCGCTTGC+GGG 0.364953 tig0023698:+6368 Msa1410690:CDS
AGAGAGTTAGACAGATTGTT+CGG 0.367012 tig0023698:+6786 Msa1410690:CDS
ATCTGATGATGGGTCTAAAT+GGG 0.368256 tig0023698:+11348 Msa1410690:CDS
GAAAGACGCAGAAACAAATA+AGG 0.373509 tig0023698:-5522 None:intergenic
CACCAAGATTTGCATCAAAC+TGG 0.373725 tig0023698:+10349 Msa1410690:CDS
GTTGTATTTATTAGGTTGGG+TGG 0.374361 tig0023698:+5982 Msa1410690:five_prime_UTR
TTTCACCAGCTGAGCGGTTG+AGG 0.374972 tig0023698:-11125 None:intergenic
AAATGTTGGTTTAGCAATTC+GGG 0.376281 tig0023698:+5957 Msa1410690:five_prime_UTR
TGCTGATCAGGGTCTCGTTC+CGG 0.380424 tig0023698:-10232 None:intergenic
GGGTCGCAGTCTCCTACTTC+TGG 0.380886 tig0023698:+6431 Msa1410690:CDS
GGCACACGGTCTCTGGTATA+AGG 0.381217 tig0023698:+8400 Msa1410690:CDS
ACAATTGGCGCTCGGCATAA+AGG 0.381693 tig0023698:-11606 None:intergenic
GGTGCCAAAGTGGTTGTGGC+GGG 0.383437 tig0023698:-10330 None:intergenic
GAGTGGTTTCCGTGAAAGTC+TGG 0.383994 tig0023698:+10117 Msa1410690:CDS
ATCCAGTTTGATGCAAATCT+TGG 0.387338 tig0023698:-10351 None:intergenic
CAAGGGAAGCTGTTGGTAAT+TGG 0.387963 tig0023698:+9619 Msa1410690:CDS
TCCGAAGTTCCTGTTTGAAT+AGG 0.392730 tig0023698:-9363 None:intergenic
AATTCACTTGCAGCTGTAGA+AGG 0.393797 tig0023698:-8360 None:intergenic
CCAGGCTCCTAATCTGCTCT+TGG 0.404707 tig0023698:-9320 None:intergenic
TTACTATTTGATGTGGCATC+AGG 0.405304 tig0023698:-9228 None:intergenic
TCTAGTTGATTTGCTTGTTA+GGG 0.405930 tig0023698:+7093 Msa1410690:CDS
AGTTTCTTGTGGCCAATCAC+TGG 0.407409 tig0023698:-9529 None:intergenic
AGGAACAAATTACCGAAAAT+GGG 0.407695 tig0023698:+9445 Msa1410690:CDS
AGTGAAAGTGAAAATGATTA+TGG 0.407925 tig0023698:+6665 Msa1410690:CDS
GAGAGTTAGACAGATTGTTC+GGG 0.409810 tig0023698:+6787 Msa1410690:CDS
AAGAGAGCTTGAGGGTTTGT+TGG 0.414285 tig0023698:+7132 Msa1410690:CDS
AAGGTCATGCACCAATTGAC+TGG 0.415663 tig0023698:+10170 Msa1410690:CDS
GAATCGTGAGTCTGAGTTGA+TGG 0.416784 tig0023698:+6358 Msa1410690:CDS
TCTGCAGATGTGGCGTGAAT+TGG 0.419574 tig0023698:+6499 Msa1410690:CDS
AACGTCAACCAGAGCATGTT+CGG 0.419677 tig0023698:+7038 Msa1410690:CDS
CGATGATAATGTATACAGTA+TGG 0.421196 tig0023698:+9719 Msa1410690:CDS
ATTATGACCAAGAGCAGATT+AGG 0.424713 tig0023698:+9313 Msa1410690:CDS
GCAGCCCTCAACCGCTCAGC+TGG 0.426661 tig0023698:+11120 Msa1410690:CDS
TATCATCTCCTGCGCCTGTC+GGG 0.426989 tig0023698:-6318 None:intergenic
CGATGCAAATCCCAGTCAAT+TGG 0.427755 tig0023698:-10181 None:intergenic
TGTGGTGGAGATTCTGTTTG+AGG 0.427897 tig0023698:+6027 Msa1410690:five_prime_UTR
CTAGTAATCAAGGAGGGAAT+TGG 0.429335 tig0023698:+9421 Msa1410690:CDS
CTCTCAACTTCGCCAAGATC+AGG 0.431148 tig0023698:-6761 None:intergenic
AGACAACGGCACACGGTCTC+TGG 0.431392 tig0023698:+8393 Msa1410690:CDS
GGGTGAGAATTGTCAGGGAA+TGG 0.431497 tig0023698:+6906 Msa1410690:CDS
CGCAGAAACAAATAAGGAAA+AGG 0.433234 tig0023698:-5516 None:intergenic
AAGGGCCTTCTGCAGCTTCA+AGG 0.433610 tig0023698:+9646 Msa1410690:CDS
ATTTGCTTGTTAGGGTAGAA+AGG 0.437618 tig0023698:+7101 Msa1410690:CDS
ACTGACGTGCATCAGTTTCC+AGG 0.437850 tig0023698:-9338 None:intergenic
GAATGATTTAAGATCAGATA+TGG 0.439004 tig0023698:+10999 Msa1410690:CDS
CTATTTGCAGGATTGGCTGC+TGG 0.440623 tig0023698:+11322 Msa1410690:intron
GGGGTTGTATTTATTAGGTT+GGG 0.441729 tig0023698:+5979 Msa1410690:five_prime_UTR
CTCCAAGCCATTCTGATCTG+TGG 0.443298 tig0023698:-6868 None:intergenic
CTTTGAGCTTCCAGTGGATG+AGG 0.444043 tig0023698:-9576 None:intergenic
GGGTTCTATATATTGTATAG+TGG 0.445310 tig0023698:+6003 Msa1410690:five_prime_UTR
TGCCAAAGTGGTTGTGGCGG+GGG 0.445857 tig0023698:-10328 None:intergenic
TGTATAATTGGATTAGCAAA+TGG 0.447441 tig0023698:+11798 Msa1410690:three_prime_UTR
CGTCAGTTTCCTATTCAAAC+AGG 0.448266 tig0023698:+9354 Msa1410690:CDS
TTCTTGCGTAAATAAATAGT+TGG 0.449694 tig0023698:+11837 Msa1410690:three_prime_UTR
TATATATTGTATAGTGGTTG+TGG 0.451456 tig0023698:+6009 Msa1410690:five_prime_UTR
TTATCATCTCCTGCGCCTGT+CGG 0.453283 tig0023698:-6319 None:intergenic
CCAAGAGCAGATTAGGAGCC+TGG 0.453655 tig0023698:+9320 Msa1410690:CDS
TTCACCAGCTGAGCGGTTGA+GGG 0.453708 tig0023698:-11124 None:intergenic
GAAGTGTATCTAACCTTCTT+CGG 0.454593 tig0023698:+10095 Msa1410690:CDS
GTGAGAGGGTGAGAATTGTC+AGG 0.455497 tig0023698:+6900 Msa1410690:CDS
AAGATTTGTAAAGAATAATT+GGG 0.455765 tig0023698:-11860 None:intergenic
TCAGGTGGCATGTGTGTTGG+TGG 0.457684 tig0023698:+5791 Msa1410690:intron
GTTGAGGTTGCGTGGAAGAC+AGG 0.460044 tig0023698:+7069 Msa1410690:CDS
GCTCTGACCACCTCAACAAT+TGG 0.461320 tig0023698:-11621 None:intergenic
GCTGCTGGGACATCTGATGA+TGG 0.467728 tig0023698:+11337 Msa1410690:CDS
GGAATCGTGATGGGTCTAGC+AGG 0.469487 tig0023698:+6729 Msa1410690:CDS
ATGTCCCGCCGAACATGCTC+TGG 0.470037 tig0023698:-7046 None:intergenic
AGGATGAACATATGTTGAAT+CGG 0.472143 tig0023698:+6522 Msa1410690:CDS
TTGTATTTATTAGGTTGGGT+GGG 0.475019 tig0023698:+5983 Msa1410690:five_prime_UTR
CAGGTGGCATGTGTGTTGGT+GGG 0.475425 tig0023698:+5792 Msa1410690:intron
ATGGAAGGGAAGCCAGTGAT+TGG 0.478204 tig0023698:+9517 Msa1410690:CDS
ATGGGCTGCCCGACAGGCGC+AGG 0.478256 tig0023698:+6310 Msa1410690:CDS
CACGGAAACCACTCCGAAGA+AGG 0.479101 tig0023698:-10108 None:intergenic
TTTGCTTGTTAGGGTAGAAA+GGG 0.480911 tig0023698:+7102 Msa1410690:CDS
CTGTATACATTATCATCGTC+AGG 0.484148 tig0023698:-9714 None:intergenic
TCCTACTTCTGGTCAGGAGG+GGG 0.484190 tig0023698:+6442 Msa1410690:CDS
AGGGAGCAATCTCCTGATCT+TGG 0.485360 tig0023698:+6749 Msa1410690:CDS
TCTCCTACTTCTGGTCAGGA+GGG 0.486081 tig0023698:+6440 Msa1410690:CDS
TTAGTTGATCCAGACTTTCA+CGG 0.486511 tig0023698:-10126 None:intergenic
GCAGTCTCCTACTTCTGGTC+AGG 0.487567 tig0023698:+6436 Msa1410690:CDS
ACGAGAGTGATCAGTTGGTT+CGG 0.488073 tig0023698:+6204 Msa1410690:CDS
TATTTGCAGGATTGGCTGCT+GGG 0.489271 tig0023698:+11323 Msa1410690:intron
ATCGGGCACGTGAAAGGATG+AGG 0.489290 tig0023698:+6540 Msa1410690:CDS
GAATTTCTGGGAGTTTCTTG+TGG 0.491352 tig0023698:-9540 None:intergenic
ATTGGATCACGGAATGCACT+TGG 0.491699 tig0023698:+6707 Msa1410690:CDS
CTCCTACTTCTGGTCAGGAG+GGG 0.492576 tig0023698:+6441 Msa1410690:CDS
GGGTCTCGTTCCGGTGAGGC+AGG 0.493156 tig0023698:-10223 None:intergenic
GGCCTGCATGGATATGCAAC+TGG 0.494398 tig0023698:+11065 Msa1410690:CDS
ATATCACGAGTTCGATCAGC+TGG 0.496919 tig0023698:-6998 None:intergenic
ATGGAAGACGCCTGAGTGCT+CGG 0.502464 tig0023698:-6476 None:intergenic
CAAATAAGGAAAAGGAAGAA+AGG 0.502694 tig0023698:-5508 None:intergenic
GGTGAGAATTGTCAGGGAAT+GGG 0.503864 tig0023698:+6907 Msa1410690:CDS
TCCTATTCAAACAGGAACTT+CGG 0.503934 tig0023698:+9362 Msa1410690:CDS
TACGCCGACTCCTGCCTCAC+CGG 0.504271 tig0023698:+10213 Msa1410690:CDS
TGGCAAGAAGCTAGTAATCA+AGG 0.504294 tig0023698:+9411 Msa1410690:CDS
GTCTGAGTTGATGGCGCTTG+CGG 0.504717 tig0023698:+6367 Msa1410690:CDS
TCATCCCCAGCTGAATTTCT+GGG 0.505696 tig0023698:-9552 None:intergenic
GTGAGAATCGAGGGAGTTTG+GGG 0.507213 tig0023698:+6636 Msa1410690:CDS
ACAGATTGTTCGGGGATGGA+TGG 0.507280 tig0023698:+6796 Msa1410690:CDS
GGAACGAGACCCTGATCAGC+AGG 0.509295 tig0023698:+10234 Msa1410690:CDS
GTCTCCTACTTCTGGTCAGG+AGG 0.513768 tig0023698:+6439 Msa1410690:CDS
ATCAGTTGGTTCGGAGGAGA+CGG 0.516815 tig0023698:+6213 Msa1410690:CDS
ATCAATGTTACTATTTGATG+TGG 0.517793 tig0023698:-9235 None:intergenic
GTGCCAAAGTGGTTGTGGCG+GGG 0.518076 tig0023698:-10329 None:intergenic
GGATGAACATATGTTGAATC+GGG 0.519171 tig0023698:+6523 Msa1410690:CDS
TGGTGCCAAAGTGGTTGTGG+CGG 0.522921 tig0023698:-10331 None:intergenic
ACCTGGTCTCATGATCAGAT+TGG 0.524477 tig0023698:+6689 Msa1410690:CDS
ATGTTCGGCGGGACATGTTG+AGG 0.524678 tig0023698:+7053 Msa1410690:CDS
GGCGCTTGCGGGTTTACATA+CGG 0.525833 tig0023698:+6379 Msa1410690:CDS
GAAACTCCCAGAAATTCAGC+TGG 0.526014 tig0023698:+9546 Msa1410690:CDS
TTAGTTTGCATGTGCAAGCT+CGG 0.526311 tig0023698:-11916 None:intergenic
GGAAAAGGAAGAAAGGTGAA+TGG 0.526889 tig0023698:-5501 None:intergenic
GCCGAGGAAGTGAGAATCGA+GGG 0.528199 tig0023698:+6627 Msa1410690:CDS
ATTTGATGTGGCATCAGGAT+TGG 0.529342 tig0023698:-9223 None:intergenic
TTAGACAGATTGTTCGGGGA+TGG 0.529360 tig0023698:+6792 Msa1410690:CDS
TCTTGGTGCCAAAGTGGTTG+TGG 0.530384 tig0023698:-10334 None:intergenic
CTGCTGGGACATCTGATGAT+GGG 0.530492 tig0023698:+11338 Msa1410690:CDS
GCAGATGTGGCGTGAATTGG+AGG 0.530860 tig0023698:+6502 Msa1410690:CDS
GAGGTTCACGTGGGAGCCGT+AGG 0.531240 tig0023698:+6951 Msa1410690:CDS
GAATCACATGCAGAGGATGT+TGG 0.531388 tig0023698:+11041 Msa1410690:CDS
GTTCGGGGATGGATGGAAAG+TGG 0.532934 tig0023698:+6803 Msa1410690:CDS
CTGATCTTGGCGAAGTTGAG+AGG 0.534468 tig0023698:+6762 Msa1410690:CDS
GCAGGGTGATGAACGTAATG+AGG 0.534699 tig0023698:+10252 Msa1410690:CDS
CTTCAACAGTTTCGTTTCGG+AGG 0.535240 tig0023698:-8326 None:intergenic
AGACGGAGGTCTGATCTTGA+AGG 0.536826 tig0023698:+6230 Msa1410690:CDS
GCTGTTGGTAATTGGTCTGA+AGG 0.538260 tig0023698:+9627 Msa1410690:CDS
GGAAGCTCAAAGAATTTGGC+AGG 0.538811 tig0023698:+9587 Msa1410690:CDS
TTCACGCCACATCTGCAGAA+TGG 0.539745 tig0023698:-6495 None:intergenic
CACAATTTCAGAGCGGTGCA+TGG 0.543258 tig0023698:-10386 None:intergenic
CGTGAATTGAGGAAGAAAGA+GGG 0.546246 tig0023698:-5618 None:intergenic
ATGCCGAGCGCCAATTGTTG+AGG 0.546842 tig0023698:+11611 Msa1410690:CDS
GAAAGACAAAGAGAGCTTGA+GGG 0.547049 tig0023698:+7124 Msa1410690:CDS
TCACGATCATACCCACTCTC+AGG 0.547393 tig0023698:+5636 Msa1410690:five_prime_UTR
CGTCTTCCATTCTGCAGATG+TGG 0.547880 tig0023698:+6489 Msa1410690:CDS
CGGGACATGTTGAGGTTGCG+TGG 0.549585 tig0023698:+7061 Msa1410690:CDS
AACCACAGATCAGAATGGCT+TGG 0.550172 tig0023698:+6866 Msa1410690:CDS
AAAGGATGAGGGAAAGGTTG+AGG 0.550511 tig0023698:+6552 Msa1410690:CDS
TGTTGAATCGGGCACGTGAA+AGG 0.550542 tig0023698:+6534 Msa1410690:CDS
ATCTGCTCAAAATTCGCGAA+TGG 0.551026 tig0023698:-6289 None:intergenic
TTCCAGTTGCATATCCATGC+AGG 0.551405 tig0023698:-11067 None:intergenic
TGTGCTAGTGAGTTAATTCG+TGG 0.551715 tig0023698:+11570 Msa1410690:CDS
GGAGAAGGCAACACCGGTGA+AGG 0.551877 tig0023698:-10298 None:intergenic
TTTACATACGGTGTCCATGT+TGG 0.551905 tig0023698:+6391 Msa1410690:CDS
AAGCCATTCTGATCTGTGGT+TGG 0.552909 tig0023698:-6864 None:intergenic
GACTTACTTGAGCATCCCTA+CGG 0.552919 tig0023698:-6967 None:intergenic
TTATCAGGTGGCATGTGTGT+TGG 0.553688 tig0023698:+5788 Msa1410690:intron
TGGGGATGATCCTCATCCAC+TGG 0.554213 tig0023698:+9566 Msa1410690:CDS
TTGGAGAAACAGAGCGTGAG+AGG 0.554943 tig0023698:+6885 Msa1410690:CDS
GAGGATGTTGGAGGCCTGCA+TGG 0.555832 tig0023698:+11053 Msa1410690:CDS
AGCTAAGAGAACTTCTGAGC+AGG 0.556367 tig0023698:+9742 Msa1410690:CDS
ATGCACTTGGGAATCGTGAT+GGG 0.556424 tig0023698:+6720 Msa1410690:CDS
ACATTAAATCATCTCAGAGA+TGG 0.557920 tig0023698:+9498 Msa1410690:CDS
CGTTCCGGTGAGGCAGGAGT+CGG 0.558246 tig0023698:-10217 None:intergenic
AATGCACTTGGGAATCGTGA+TGG 0.560050 tig0023698:+6719 Msa1410690:CDS
TGATCTTGGCGAAGTTGAGA+GGG 0.560256 tig0023698:+6763 Msa1410690:CDS
GTTCATCACCCTGCTGATCA+GGG 0.560357 tig0023698:-10243 None:intergenic
ATCCTCATCATCTTGTACAC+GGG 0.562167 tig0023698:-6180 None:intergenic
TCCCTCGATTCTCACTTCCT+CGG 0.562584 tig0023698:-6628 None:intergenic
TCGTGAATTGAGGAAGAAAG+AGG 0.562783 tig0023698:-5619 None:intergenic
GTGGGTATGATCGTGAATTG+AGG 0.563160 tig0023698:-5629 None:intergenic
AGCCATTAACAGACCTTCAC+CGG 0.563473 tig0023698:+10285 Msa1410690:CDS
TCCCACGTGAACCTCGCTGT+TGG 0.563958 tig0023698:-6943 None:intergenic
CAAATTCTTTGAGCTTCCAG+TGG 0.564514 tig0023698:-9582 None:intergenic
ACATTTGAAAATGAATCTCT+CGG 0.566970 tig0023698:-5940 None:intergenic
AGGTGGCATGTGTGTTGGTG+GGG 0.567426 tig0023698:+5793 Msa1410690:intron
GTGAAAATGATTATGGTACC+TGG 0.568902 tig0023698:+6672 Msa1410690:CDS
ATTGCAGAGATCTGTCAGAC+AGG 0.569324 tig0023698:+11089 Msa1410690:CDS
TCAACCAGAGCATGTTCGGC+GGG 0.570142 tig0023698:+7042 Msa1410690:CDS
CATCCTCATCATCTTGTACA+CGG 0.570755 tig0023698:-6181 None:intergenic
TAAATCATCTCAGAGATGGA+AGG 0.572178 tig0023698:+9502 Msa1410690:CDS
CGATTCCTTGAAGCTGCAGA+AGG 0.573090 tig0023698:-9651 None:intergenic
CAGTCATATGTTGAAAGGCA+AGG 0.575265 tig0023698:+10151 Msa1410690:CDS
AGCCAACAGCGAGGTTCACG+TGG 0.577787 tig0023698:+6941 Msa1410690:CDS
GCTCTGGTTGACGTTCATCA+TGG 0.578093 tig0023698:-7030 None:intergenic
AAATCATCTCAGAGATGGAA+GGG 0.578754 tig0023698:+9503 Msa1410690:CDS
GGATGACGAGAGTGATCAGT+TGG 0.583853 tig0023698:+6199 Msa1410690:CDS
AAAGGAAAATTGGAAGGACA+TGG 0.584700 tig0023698:+11660 Msa1410690:three_prime_UTR
TAATACAGTCATATGTTGAA+AGG 0.585108 tig0023698:+10146 Msa1410690:CDS
GAAATTGACGTACCTGAGAG+TGG 0.587270 tig0023698:-5648 None:intergenic
GGAAAGACAAAGAGAGCTTG+AGG 0.587366 tig0023698:+7123 Msa1410690:CDS
TAATCAAGGAGGGAATTGGC+AGG 0.588877 tig0023698:+9425 Msa1410690:CDS
CACGTGAAAGGATGAGGGAA+AGG 0.589456 tig0023698:+6546 Msa1410690:CDS
AGAGTGATCAGTTGGTTCGG+AGG 0.591760 tig0023698:+6207 Msa1410690:CDS
GTATCTAACCTTCTTCGGAG+TGG 0.596504 tig0023698:+10100 Msa1410690:CDS
GCATAAAGTCATCCAATCCA+TGG 0.596754 tig0023698:-6112 None:intergenic
ACTTCCTCGGCTGTCAGACA+TGG 0.597778 tig0023698:-6615 None:intergenic
CTGTTGGTAATTGGTCTGAA+GGG 0.598365 tig0023698:+9628 Msa1410690:CDS
AGTGAGTTAATTCGTGGAGG+AGG 0.598814 tig0023698:+11576 Msa1410690:CDS
AGGTTCACGTGGGAGCCGTA+GGG 0.600410 tig0023698:+6952 Msa1410690:CDS
TTGGATCACGGAATGCACTT+GGG 0.601180 tig0023698:+6708 Msa1410690:CDS
AAACTCCCAGAAATTCAGCT+GGG 0.603834 tig0023698:+9547 Msa1410690:CDS
ACGAAACTGTTGAAGATGAG+AGG 0.606489 tig0023698:+8334 Msa1410690:CDS
TGTTGAGAGACCGAGCACTC+AGG 0.610160 tig0023698:+6466 Msa1410690:CDS
AGCCGAGGAAGTGAGAATCG+AGG 0.610316 tig0023698:+6626 Msa1410690:CDS
CCGAGCGCCAATTGTTGAGG+TGG 0.612498 tig0023698:+11614 Msa1410690:CDS
CAGGGTGATGAACGTAATGA+GGG 0.613271 tig0023698:+10253 Msa1410690:CDS
GGTGAGGCAGGAGTCGGCGT+AGG 0.613632 tig0023698:-10211 None:intergenic
TGGAGAAACAGAGCGTGAGA+GGG 0.613769 tig0023698:+6886 Msa1410690:CDS
AGACATGGTACTTGACACAT+TGG 0.614472 tig0023698:-6600 None:intergenic
TCTGATGATGGGTCTAAATG+GGG 0.615933 tig0023698:+11349 Msa1410690:CDS
TCTCAGTTCTGGATGTCTCG+AGG 0.618377 tig0023698:+11712 Msa1410690:three_prime_UTR
AAGATTTGCATCAAACTGGA+TGG 0.622065 tig0023698:+10353 Msa1410690:CDS
TCACATGCAGAGGATGTTGG+AGG 0.622068 tig0023698:+11044 Msa1410690:CDS
AGGTCATGCACCAATTGACT+GGG 0.622249 tig0023698:+10171 Msa1410690:CDS
TTCCCGTGTACAAGATGATG+AGG 0.625487 tig0023698:+6178 Msa1410690:CDS
AAATTGACGTACCTGAGAGT+GGG 0.629984 tig0023698:-5647 None:intergenic
AAGGCATGAATCACATGCAG+AGG 0.630235 tig0023698:+11034 Msa1410690:CDS
AATGTTGGTTTAGCAATTCG+GGG 0.630299 tig0023698:+5958 Msa1410690:five_prime_UTR
GTCAACCAGAGCATGTTCGG+CGG 0.634946 tig0023698:+7041 Msa1410690:CDS
TCCAATCTGATCATGAGACC+AGG 0.636677 tig0023698:-6690 None:intergenic
CCACCTCAACAATTGGCGCT+CGG 0.637251 tig0023698:-11614 None:intergenic
GGAACAAATTACCGAAAATG+GGG 0.638990 tig0023698:+9446 Msa1410690:CDS
CTCATGATCAGATTGGATCA+CGG 0.639942 tig0023698:+6696 Msa1410690:CDS
ACACCAACCACAGATCAGAA+TGG 0.640334 tig0023698:+6861 Msa1410690:CDS
TGAGAGGGTGAGAATTGTCA+GGG 0.644193 tig0023698:+6901 Msa1410690:CDS
ATCAGGGTCTCGTTCCGGTG+AGG 0.644265 tig0023698:-10227 None:intergenic
ACTGGTGGAGAAGGCAACAC+CGG 0.645499 tig0023698:-10304 None:intergenic
ATGTTGGTTTAGCAATTCGG+GGG 0.645923 tig0023698:+5959 Msa1410690:five_prime_UTR
GAATCGTGATGGGTCTAGCA+GGG 0.648271 tig0023698:+6730 Msa1410690:CDS
AGATGATAACTACTATTGAG+AGG 0.649951 tig0023698:+6333 Msa1410690:CDS
TCAGTTAAGACAACGGCACA+CGG 0.650181 tig0023698:+8386 Msa1410690:CDS
ATATTGTATAGTGGTTGTGG+TGG 0.651117 tig0023698:+6012 Msa1410690:five_prime_UTR
GATTGGTGCTTGATTGACCA+CGG 0.651274 tig0023698:-9206 None:intergenic
ACCTTCTAAAAGGAACACTA+CGG 0.651487 tig0023698:-9674 None:intergenic
TCGGGCACGTGAAAGGATGA+GGG 0.651672 tig0023698:+6541 Msa1410690:CDS
TGAGAATCGAGGGAGTTTGG+GGG 0.654077 tig0023698:+6637 Msa1410690:CDS
AGTTGGTTCGGAGGAGACGG+AGG 0.655331 tig0023698:+6216 Msa1410690:CDS
AAGAAGCTAGTAATCAAGGA+GGG 0.657999 tig0023698:+9415 Msa1410690:CDS
AACTCCCAGAAATTCAGCTG+GGG 0.659515 tig0023698:+9548 Msa1410690:CDS
TCACTTGCAGCTGTAGAAGG+AGG 0.664157 tig0023698:-8357 None:intergenic
CTGATGATGGGTCTAAATGG+GGG 0.664451 tig0023698:+11350 Msa1410690:CDS
AGTACCATGTCTGACAGCCG+AGG 0.666216 tig0023698:+6611 Msa1410690:CDS
AATGTACCATTAATTCTCTG+CGG 0.668687 tig0023698:-9480 None:intergenic
GATAACACAAGGGAAGCTGT+TGG 0.669430 tig0023698:+9612 Msa1410690:CDS
GCAGAGATCTGTCAGACAGG+AGG 0.672293 tig0023698:+11092 Msa1410690:CDS
TGCAAATCTTGGTGCCAAAG+TGG 0.673481 tig0023698:-10340 None:intergenic
TGATAACTACTATTGAGAGG+AGG 0.675517 tig0023698:+6336 Msa1410690:CDS
AGATTAGAGAATATTGTCCG+TGG 0.677946 tig0023698:+9189 Msa1410690:CDS
AGAGTTAGACAGATTGTTCG+GGG 0.678639 tig0023698:+6788 Msa1410690:CDS
GAACGAGACCCTGATCAGCA+GGG 0.680634 tig0023698:+10235 Msa1410690:CDS
AATTAGTTCAGTTAAGACAA+CGG 0.688036 tig0023698:+8379 Msa1410690:CDS
TGTACAAAAGCGAATCAATG+TGG 0.689013 tig0023698:-11411 None:intergenic
CAAGAAGCTAGTAATCAAGG+AGG 0.690019 tig0023698:+9414 Msa1410690:CDS
TCATTTCAGTCATTGCTCAG+AGG 0.693568 tig0023698:+8297 Msa1410690:intron
CAGAGTCATCAGCTGCGCGG+AGG 0.693969 tig0023698:+6264 Msa1410690:CDS
TTTGGCAGGACGATAACACA+AGG 0.695220 tig0023698:+9601 Msa1410690:CDS
GGATTGGATGACTTTATGCG+TGG 0.695910 tig0023698:+6116 Msa1410690:CDS
TGTTGGTTTAGCAATTCGGG+GGG 0.700088 tig0023698:+5960 Msa1410690:five_prime_UTR
GCTAGTGAGTTAATTCGTGG+AGG 0.712981 tig0023698:+11573 Msa1410690:CDS
TATACATTATCATCGTCAGG+AGG 0.719373 tig0023698:-9711 None:intergenic
GATATGGCAAGACTTCAGCA+AGG 0.721227 tig0023698:+11015 Msa1410690:CDS
GAACAAATTACCGAAAATGG+GGG 0.722137 tig0023698:+9447 Msa1410690:CDS
ATCCAATTATACAATCAGTG+AGG 0.726694 tig0023698:-11788 None:intergenic
TAGCAGAGTCATCAGCTGCG+CGG 0.730280 tig0023698:+6261 Msa1410690:CDS
GCCAACAGCGAGGTTCACGT+GGG 0.735230 tig0023698:+6942 Msa1410690:CDS
CAAATGACTAGCCAACAGCG+AGG 0.762194 tig0023698:+6932 Msa1410690:CDS
AATTGCTCACAATTTCAGAG+CGG 0.765544 tig0023698:-10393 None:intergenic
TTGGCAGGACGATAACACAA+GGG 0.777117 tig0023698:+9602 Msa1410690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTTATTAT+TGG + tig0023698:11489-11508 Msa1410690:intron 0.0%
!!! ATATAGTTATAGATTTTTAA+TGG + tig0023698:7500-7519 Msa1410690:intron 10.0%
!!! TTTGAATGAATTTATTATTT+TGG + tig0023698:11207-11226 Msa1410690:intron 10.0%
!! AAAAAAAAAACTAATATATG+GGG - tig0023698:11476-11495 None:intergenic 10.0%
!! ACAATATGAAAATGAAAATT+AGG - tig0023698:5701-5720 None:intergenic 15.0%
!! ATTTGAATTTCAATTTCATT+AGG + tig0023698:5816-5835 Msa1410690:five_prime_UTR 15.0%
!! TTTGAATTTCAATTTCATTA+GGG + tig0023698:5817-5836 Msa1410690:five_prime_UTR 15.0%
!! CAAAAAAGAAAAAGAAAAAA+GGG - tig0023698:5904-5923 None:intergenic 15.0%
!! ACAAAAAAGAAAAAGAAAAA+AGG - tig0023698:5905-5924 None:intergenic 15.0%
!! AATAACTTATGTTTAATTCA+AGG + tig0023698:7320-7339 Msa1410690:intron 15.0%
!! TCAATAGTTTATATTATAGT+TGG + tig0023698:7345-7364 Msa1410690:intron 15.0%
!! CAATAGTTTATATTATAGTT+GGG + tig0023698:7346-7365 Msa1410690:intron 15.0%
!!! TTATTTCTAATTTCTAATAC+TGG - tig0023698:8673-8692 None:intergenic 15.0%
!!! TGTTATTATTATTTTGCAAA+AGG + tig0023698:8938-8957 Msa1410690:intron 15.0%
!!! TTTATTTTAGATTTTGGAAA+GGG - tig0023698:9916-9935 None:intergenic 15.0%
!!! ATTTATTTTAGATTTTGGAA+AGG - tig0023698:9917-9936 None:intergenic 15.0%
!! TTAACAAAAAATATTACCTA+GGG + tig0023698:10462-10481 Msa1410690:intron 15.0%
!! GAAAATTATTAAATTTGATC+CGG + tig0023698:10604-10623 Msa1410690:intron 15.0%
!!! ATATTTTTAATCATTTAGCA+TGG - tig0023698:10680-10699 None:intergenic 15.0%
!! AATAGATTAATATACAATGA+GGG - tig0023698:11307-11326 None:intergenic 15.0%
!! AAATAGATTAATATACAATG+AGG - tig0023698:11308-11327 None:intergenic 15.0%
!! AAGATTTGTAAAGAATAATT+GGG - tig0023698:11863-11882 None:intergenic 15.0%
!! AAAGATTTGTAAAGAATAAT+TGG - tig0023698:11864-11883 None:intergenic 15.0%
!! TTGAAAAGAGAGAAAAAAAA+GGG - tig0023698:5566-5585 None:intergenic 20.0%
!!! TTCTTTTTTGTTTTCCTTTT+TGG + tig0023698:5914-5933 Msa1410690:five_prime_UTR 20.0%
!! AAAATCTATAACTATATCCA+AGG - tig0023698:7497-7516 None:intergenic 20.0%
!!! TAATGGTTTTTCAGTATTTA+AGG + tig0023698:7517-7536 Msa1410690:intron 20.0%
!!! ATTTTCAAAGAAATACTACA+TGG - tig0023698:7630-7649 None:intergenic 20.0%
!!! ATTTCACACTCTATTTTTTA+AGG - tig0023698:7795-7814 None:intergenic 20.0%
!!! ATAGAGTGTGAAATATTTTT+TGG + tig0023698:7801-7820 Msa1410690:intron 20.0%
!!! TTTTAAGACTATAATTCAAG+AGG + tig0023698:7918-7937 Msa1410690:intron 20.0%
!! TATCAAATCTTTACATAGAA+AGG + tig0023698:7982-8001 Msa1410690:intron 20.0%
!! AACGAAGTAATTAAAGATAA+AGG - tig0023698:8157-8176 None:intergenic 20.0%
!! CTCGTGATTTATTAATTATT+CGG - tig0023698:8181-8200 None:intergenic 20.0%
!! ATTAGAAATAAGATTAGAAG+TGG + tig0023698:8682-8701 Msa1410690:intron 20.0%
!! TGAATAAAATGATGAGTAAA+AGG - tig0023698:8825-8844 None:intergenic 20.0%
!!! TATTATTTTGCAAAAGGAAT+TGG + tig0023698:8944-8963 Msa1410690:intron 20.0%
!! ATATTTATCAAATTTCCAAC+TGG + tig0023698:9821-9840 Msa1410690:intron 20.0%
!!! AGGAGATTTATTTTAGATTT+TGG - tig0023698:9922-9941 None:intergenic 20.0%
!! GATCTTTATATTAATGTTTC+AGG + tig0023698:10032-10051 Msa1410690:intron 20.0%
!!! CTAGGTAATATTTTTTGTTA+AGG - tig0023698:10463-10482 None:intergenic 20.0%
!! CTTAACAAAAAATATTACCT+AGG + tig0023698:10461-10480 Msa1410690:intron 20.0%
!! TTGTATATTAATCTATTTGC+AGG + tig0023698:11310-11329 Msa1410690:intron 20.0%
! GTTGAAAAGAGAGAAAAAAA+AGG - tig0023698:5567-5586 None:intergenic 25.0%
! AAAATGAAAATTAGGATCAG+CGG - tig0023698:5693-5712 None:intergenic 25.0%
! ACATTTGAAAATGAATCTCT+CGG - tig0023698:5943-5962 None:intergenic 25.0%
!! AGAGATTCATTTTCAAATGT+TGG + tig0023698:5943-5962 Msa1410690:five_prime_UTR 25.0%
! TATATATTGTATAGTGGTTG+TGG + tig0023698:6009-6028 Msa1410690:five_prime_UTR 25.0%
! AGTGAAAGTGAAAATGATTA+TGG + tig0023698:6665-6684 Msa1410690:CDS 25.0%
! GATAAATCTGAATTCTGATA+GGG - tig0023698:7214-7233 None:intergenic 25.0%
! AGATAAATCTGAATTCTGAT+AGG - tig0023698:7215-7234 None:intergenic 25.0%
! CTTGCAATTTATATTTACCT+TGG + tig0023698:7233-7252 Msa1410690:intron 25.0%
! ATTTATATTTACCTTGGTCA+TGG + tig0023698:7239-7258 Msa1410690:intron 25.0%
! CATTATGTTCTTCCTTAATA+TGG + tig0023698:7400-7419 Msa1410690:intron 25.0%
! AATTAGTTCAGTTAAGACAA+CGG + tig0023698:8379-8398 Msa1410690:CDS 25.0%
! CTCATCATTTCAATCTATAT+AGG + tig0023698:8467-8486 Msa1410690:intron 25.0%
! TTAACTTTAAACCTATGTTG+TGG + tig0023698:8625-8644 Msa1410690:intron 25.0%
! TAACTTTAAACCTATGTTGT+GGG + tig0023698:8626-8645 Msa1410690:intron 25.0%
! ACATATTATACAAAGCACAA+GGG - tig0023698:8776-8795 None:intergenic 25.0%
! TACATATTATACAAAGCACA+AGG - tig0023698:8777-8796 None:intergenic 25.0%
! TATGTAACTTTGATTCACAA+TGG + tig0023698:8791-8810 Msa1410690:intron 25.0%
! ATCAGGCATTTATTAGATTA+TGG + tig0023698:9088-9107 Msa1410690:intron 25.0%
! ATCAATGTTACTATTTGATG+TGG - tig0023698:9238-9257 None:intergenic 25.0%
! AATCTATTGAACCTTCTAAA+AGG - tig0023698:9687-9706 None:intergenic 25.0%
! TTGATAAATATAAGCGAAAC+AGG - tig0023698:9812-9831 None:intergenic 25.0%
! TACAATATCAAGGTAGAAAT+AGG - tig0023698:9942-9961 None:intergenic 25.0%
! TAATACAGTCATATGTTGAA+AGG + tig0023698:10146-10165 Msa1410690:CDS 25.0%
!!! AATAATTTTCTAGCTTCAAC+TGG - tig0023698:10594-10613 None:intergenic 25.0%
!!! TATGAATAGTTTTAAAGCTC+TGG + tig0023698:10751-10770 Msa1410690:intron 25.0%
!!! ATGAATAGTTTTAAAGCTCT+GGG + tig0023698:10752-10771 Msa1410690:intron 25.0%
! GAAGAAAAGAGTAATTAAAG+TGG - tig0023698:10842-10861 None:intergenic 25.0%
! ACACAAGAACACAAAATAAA+TGG - tig0023698:10864-10883 None:intergenic 25.0%
!! TATAGTATGAAAGCATAGAA+GGG - tig0023698:10916-10935 None:intergenic 25.0%
!! ATATAGTATGAAAGCATAGA+AGG - tig0023698:10917-10936 None:intergenic 25.0%
!! GAATGATTTAAGATCAGATA+TGG + tig0023698:10999-11018 Msa1410690:CDS 25.0%
! TATTAATCTATTTGCAGGAT+TGG + tig0023698:11315-11334 Msa1410690:intron 25.0%
! ATCTGCAAGAAATTGAAATT+TGG - tig0023698:11524-11543 None:intergenic 25.0%
!! CAATTTTCCTTTTTACAGTA+TGG - tig0023698:11652-11671 None:intergenic 25.0%
! CATACTGTAAAAAGGAAAAT+TGG + tig0023698:11650-11669 Msa1410690:exon 25.0%
! CATATGTAATCAGAAAAACA+AGG - tig0023698:11765-11784 None:intergenic 25.0%
!!! CTTGTTTTTCTGATTACATA+TGG + tig0023698:11763-11782 Msa1410690:three_prime_UTR 25.0%
!!! TGTATAATTGGATTAGCAAA+TGG + tig0023698:11798-11817 Msa1410690:three_prime_UTR 25.0%
! TTCTTGCGTAAATAAATAGT+TGG + tig0023698:11837-11856 Msa1410690:three_prime_UTR 25.0%
CAAATAAGGAAAAGGAAGAA+AGG - tig0023698:5511-5530 None:intergenic 30.0%
TGAAAGCCATAAGAAAAAGA+GGG - tig0023698:5862-5881 None:intergenic 30.0%
ATGAAAGCCATAAGAAAAAG+AGG - tig0023698:5863-5882 None:intergenic 30.0%
!! CAAATGTTGGTTTAGCAATT+CGG + tig0023698:5956-5975 Msa1410690:five_prime_UTR 30.0%
!! AAATGTTGGTTTAGCAATTC+GGG + tig0023698:5957-5976 Msa1410690:five_prime_UTR 30.0%
!! TTGTATTTATTAGGTTGGGT+GGG + tig0023698:5983-6002 Msa1410690:five_prime_UTR 30.0%
GGGTTCTATATATTGTATAG+TGG + tig0023698:6003-6022 Msa1410690:five_prime_UTR 30.0%
AGATGATAACTACTATTGAG+AGG + tig0023698:6333-6352 Msa1410690:CDS 30.0%
AGGATGAACATATGTTGAAT+CGG + tig0023698:6522-6541 Msa1410690:CDS 30.0%
!! TCTAGTTGATTTGCTTGTTA+GGG + tig0023698:7093-7112 Msa1410690:CDS 30.0%
ATGCAGATCATTCCATATTA+AGG - tig0023698:7415-7434 None:intergenic 30.0%
! ATTTAAGGTTGCTATATGTG+TGG + tig0023698:7532-7551 Msa1410690:intron 30.0%
TCAAAGAAATACTACATGGA+TGG - tig0023698:7626-7645 None:intergenic 30.0%
AATAAAATATCTGCCACTCT+GGG - tig0023698:7845-7864 None:intergenic 30.0%
! TTATTCGTTGTAGTGGAAAA+TGG + tig0023698:8040-8059 Msa1410690:intron 30.0%
! TATTCGTTGTAGTGGAAAAT+GGG + tig0023698:8041-8060 Msa1410690:intron 30.0%
!!! CTGCACATTATTTTGGTTTT+TGG + tig0023698:8117-8136 Msa1410690:intron 30.0%
GATAATTTCCTTCTGTATCT+TGG - tig0023698:8573-8592 None:intergenic 30.0%
ATACTGGATATAAAAGACAG+AGG - tig0023698:8657-8676 None:intergenic 30.0%
AAGATTAGAAGTGGTTTAGT+TGG + tig0023698:8691-8710 Msa1410690:intron 30.0%
TTCATTGTCGATCTTGATAT+CGG + tig0023698:8841-8860 Msa1410690:intron 30.0%
TGGTAAATGTGTTAATGATC+AGG + tig0023698:9071-9090 Msa1410690:intron 30.0%
GCTTATTACCAACACTTATA+TGG + tig0023698:9143-9162 Msa1410690:intron 30.0%
CATCTATGAGATTGTTTGAT+TGG - tig0023698:9281-9300 None:intergenic 30.0%
AGGAACAAATTACCGAAAAT+GGG + tig0023698:9445-9464 Msa1410690:CDS 30.0%
! CGATGATAATGTATACAGTA+TGG + tig0023698:9719-9738 Msa1410690:CDS 30.0%
AAAGATCCATAACTATCACA+AGG - tig0023698:10019-10038 None:intergenic 30.0%
TGAAACATTAATACCGAAGA+AGG - tig0023698:10072-10091 None:intergenic 30.0%
TTCTTCGGTATTAATGTTTC+AGG + tig0023698:10071-10090 Msa1410690:intron 30.0%
CTCATTTCACATATTCAACT+AGG - tig0023698:10727-10746 None:intergenic 30.0%
!! TGTTTGTGATCTTTGTTGTT+AGG + tig0023698:10783-10802 Msa1410690:intron 30.0%
! TGATACATTTTTCTGACAAC+AGG + tig0023698:10816-10835 Msa1410690:intron 30.0%
!!! ATTACTGTTTTGATTCTGAC+TGG + tig0023698:10956-10975 Msa1410690:intron 30.0%
!!! TTACTGTTTTGATTCTGACT+GGG + tig0023698:10957-10976 Msa1410690:intron 30.0%
ATTCAAACAAAACACAACAG+TGG - tig0023698:11194-11213 None:intergenic 30.0%
ATTTCAATTTCTTGCAGATG+TGG + tig0023698:11525-11544 Msa1410690:intron 30.0%
GCATATTCCATACTGTAAAA+AGG + tig0023698:11642-11661 Msa1410690:exon 30.0%
CTGTAAAAAGGAAAATTGGA+AGG + tig0023698:11654-11673 Msa1410690:exon 30.0%
! AACCTCACTGATTGTATAAT+TGG + tig0023698:11786-11805 Msa1410690:three_prime_UTR 30.0%
ATCCAATTATACAATCAGTG+AGG - tig0023698:11791-11810 None:intergenic 30.0%
CGCAGAAACAAATAAGGAAA+AGG - tig0023698:5519-5538 None:intergenic 35.0%
GAAAGACGCAGAAACAAATA+AGG - tig0023698:5525-5544 None:intergenic 35.0%
AAGAGAGAAAAAAAAGGGTG+AGG - tig0023698:5561-5580 None:intergenic 35.0%
AGAAACCCTAGAAAAATCGT+GGG - tig0023698:5594-5613 None:intergenic 35.0%
AAGAAACCCTAGAAAAATCG+TGG - tig0023698:5595-5614 None:intergenic 35.0%
GATAACTCGTATCGTTTATC+AGG + tig0023698:5773-5792 Msa1410690:intron 35.0%
GAAAGCCATAAGAAAAAGAG+GGG - tig0023698:5861-5880 None:intergenic 35.0%
!! AATGTTGGTTTAGCAATTCG+GGG + tig0023698:5958-5977 Msa1410690:five_prime_UTR 35.0%
GGGGTTGTATTTATTAGGTT+GGG + tig0023698:5979-5998 Msa1410690:five_prime_UTR 35.0%
!! GTTGTATTTATTAGGTTGGG+TGG + tig0023698:5982-6001 Msa1410690:five_prime_UTR 35.0%
ATATTGTATAGTGGTTGTGG+TGG + tig0023698:6012-6031 Msa1410690:five_prime_UTR 35.0%
!! TTCTGATTTTGACCATGGAT+TGG + tig0023698:6100-6119 Msa1410690:CDS 35.0%
TGATAACTACTATTGAGAGG+AGG + tig0023698:6336-6355 Msa1410690:CDS 35.0%
CAAAAAAGAGGAATCCAACA+TGG - tig0023698:6408-6427 None:intergenic 35.0%
!!! TGTTGGATTCCTCTTTTTTG+AGG + tig0023698:6408-6427 Msa1410690:CDS 35.0%
!!! GTTGGATTCCTCTTTTTTGA+GGG + tig0023698:6409-6428 Msa1410690:CDS 35.0%
!!! TTGGATTCCTCTTTTTTGAG+GGG + tig0023698:6410-6429 Msa1410690:CDS 35.0%
GGATGAACATATGTTGAATC+GGG + tig0023698:6523-6542 Msa1410690:CDS 35.0%
GTGAAAATGATTATGGTACC+TGG + tig0023698:6672-6691 Msa1410690:CDS 35.0%
AGAGAGTTAGACAGATTGTT+CGG + tig0023698:6786-6805 Msa1410690:CDS 35.0%
!! CTCTAGTTGATTTGCTTGTT+AGG + tig0023698:7092-7111 Msa1410690:CDS 35.0%
! ATTTGCTTGTTAGGGTAGAA+AGG + tig0023698:7101-7120 Msa1410690:CDS 35.0%
! TTTGCTTGTTAGGGTAGAAA+GGG + tig0023698:7102-7121 Msa1410690:CDS 35.0%
! GGTGTTTTCACTTCACTTAA+TGG + tig0023698:7260-7279 Msa1410690:intron 35.0%
ATATGTCTGGTACTCTGATT+TGG + tig0023698:7455-7474 Msa1410690:intron 35.0%
CAATAAAATATCTGCCACTC+TGG - tig0023698:7846-7865 None:intergenic 35.0%
TGTTCAGTTATTCGTTGTAG+TGG + tig0023698:8033-8052 Msa1410690:intron 35.0%
GTAGCTCAAGTAACAAAAGA+AGG - tig0023698:8098-8117 None:intergenic 35.0%
! TGAGCTACTGCACATTATTT+TGG + tig0023698:8110-8129 Msa1410690:intron 35.0%
CATCTTCAACAGTTTCGTTT+CGG - tig0023698:8332-8351 None:intergenic 35.0%
AATTTCCTTCTGTATCTTGG+AGG - tig0023698:8570-8589 None:intergenic 35.0%
TTGGTCTAACATCTGTTTCA+AGG + tig0023698:8710-8729 Msa1410690:intron 35.0%
GTAACTTTGATTCACAATGG+TGG + tig0023698:8794-8813 Msa1410690:intron 35.0%
AAAAGGAATTGGCATTTCTG+TGG + tig0023698:8955-8974 Msa1410690:intron 35.0%
CAACACTTATATGGTGTTCA+GGG + tig0023698:9152-9171 Msa1410690:intron 35.0%
AGATTAGAGAATATTGTCCG+TGG + tig0023698:9189-9208 Msa1410690:CDS 35.0%
TTACTATTTGATGTGGCATC+AGG - tig0023698:9231-9250 None:intergenic 35.0%
ATTATGACCAAGAGCAGATT+AGG + tig0023698:9313-9332 Msa1410690:CDS 35.0%
TCCTATTCAAACAGGAACTT+CGG + tig0023698:9362-9381 Msa1410690:CDS 35.0%
GCACAAGTGAACCTATTAAT+TGG + tig0023698:9391-9410 Msa1410690:CDS 35.0%
CTAGCTTCTTGCCAATTAAT+AGG - tig0023698:9405-9424 None:intergenic 35.0%
AAGAAGCTAGTAATCAAGGA+GGG + tig0023698:9415-9434 Msa1410690:CDS 35.0%
CAGGAACAAATTACCGAAAA+TGG + tig0023698:9444-9463 Msa1410690:CDS 35.0%
GGAACAAATTACCGAAAATG+GGG + tig0023698:9446-9465 Msa1410690:CDS 35.0%
GAACAAATTACCGAAAATGG+GGG + tig0023698:9447-9466 Msa1410690:CDS 35.0%
TAAATCATCTCAGAGATGGA+AGG + tig0023698:9502-9521 Msa1410690:CDS 35.0%
AAATCATCTCAGAGATGGAA+GGG + tig0023698:9503-9522 Msa1410690:CDS 35.0%
! ACCTTCTAAAAGGAACACTA+CGG - tig0023698:9677-9696 None:intergenic 35.0%
TATACATTATCATCGTCAGG+AGG - tig0023698:9714-9733 None:intergenic 35.0%
CTGTATACATTATCATCGTC+AGG - tig0023698:9717-9736 None:intergenic 35.0%
TGCAAAATATGCAAAAGGGA+AGG - tig0023698:9772-9791 None:intergenic 35.0%
GCGATGCAAAATATGCAAAA+GGG - tig0023698:9776-9795 None:intergenic 35.0%
TGCGATGCAAAATATGCAAA+AGG - tig0023698:9777-9796 None:intergenic 35.0%
ATCAAATTTCCAACTGGCAT+TGG + tig0023698:9827-9846 Msa1410690:intron 35.0%
ACAGAAATCAAGACACGTTT+AGG - tig0023698:9877-9896 None:intergenic 35.0%
TAAACGTGTCTTGATTTCTG+TGG + tig0023698:9876-9895 Msa1410690:intron 35.0%
CCATGTTCTGTACAATATCA+AGG - tig0023698:9952-9971 None:intergenic 35.0%
CCTTGATATTGTACAGAACA+TGG + tig0023698:9949-9968 Msa1410690:intron 35.0%
TGGCTTGATACTTCATTTAC+TGG + tig0023698:9969-9988 Msa1410690:intron 35.0%
GAAGTGTATCTAACCTTCTT+CGG + tig0023698:10056-10075 Msa1410690:intron 35.0%
GAAGTGTATCTAACCTTCTT+CGG + tig0023698:10056-10075 Msa1410690:intron 35.0%
TTAGTTGATCCAGACTTTCA+CGG - tig0023698:10129-10148 None:intergenic 35.0%
ATCCAGTTTGATGCAAATCT+TGG - tig0023698:10354-10373 None:intergenic 35.0%
AAGATTTGCATCAAACTGGA+TGG + tig0023698:10353-10372 Msa1410690:CDS 35.0%
AATTGCTCACAATTTCAGAG+CGG - tig0023698:10396-10415 None:intergenic 35.0%
AAGTGCTATCTTACGAACAT+AGG - tig0023698:10434-10453 None:intergenic 35.0%
TATTCTGTATGCAAATCCCT+AGG - tig0023698:10481-10500 None:intergenic 35.0%
CCTTAACTAACATCTTGAAC+CGG - tig0023698:10626-10645 None:intergenic 35.0%
!! TGATCTTTGTTGTTAGGTCT+TGG + tig0023698:10789-10808 Msa1410690:intron 35.0%
ACTTGCATAAGTAAAGGACT+AGG - tig0023698:10890-10909 None:intergenic 35.0%
TCTGCTTCATTCATTGCTAT+TGG + tig0023698:11165-11184 Msa1410690:intron 35.0%
ATGAGGGATGAGATCAAAAA+AGG - tig0023698:11291-11310 None:intergenic 35.0%
!! ATCTGATGATGGGTCTAAAT+GGG + tig0023698:11348-11367 Msa1410690:CDS 35.0%
TGTACAAAAGCGAATCAATG+TGG - tig0023698:11414-11433 None:intergenic 35.0%
!!! ACATTGATTCGCTTTTGTAC+AGG + tig0023698:11413-11432 Msa1410690:CDS 35.0%
AAAGGAAAATTGGAAGGACA+TGG + tig0023698:11660-11679 Msa1410690:three_prime_UTR 35.0%
GGAAAAGGAAGAAAGGTGAA+TGG - tig0023698:5504-5523 None:intergenic 40.0%
! ACCATTCCCACGATTTTTCT+AGG + tig0023698:5585-5604 Msa1410690:five_prime_UTR 40.0%
! CCATTCCCACGATTTTTCTA+GGG + tig0023698:5586-5605 Msa1410690:five_prime_UTR 40.0%
CGTGAATTGAGGAAGAAAGA+GGG - tig0023698:5621-5640 None:intergenic 40.0%
TCGTGAATTGAGGAAGAAAG+AGG - tig0023698:5622-5641 None:intergenic 40.0%
AAATTGACGTACCTGAGAGT+GGG - tig0023698:5650-5669 None:intergenic 40.0%
GAAAATTAGGATCAGCGGAA+TGG - tig0023698:5688-5707 None:intergenic 40.0%
AACTCGTATCGTTTATCAGG+TGG + tig0023698:5776-5795 Msa1410690:intron 40.0%
! GCTTTCCCCTCTTTTTCTTA+TGG + tig0023698:5853-5872 Msa1410690:five_prime_UTR 40.0%
GAATCTCTCGGAAACCAAAA+AGG - tig0023698:5931-5950 None:intergenic 40.0%
!! ATGTTGGTTTAGCAATTCGG+GGG + tig0023698:5959-5978 Msa1410690:five_prime_UTR 40.0%
TTCGGGGGGTTGTATTTATT+AGG + tig0023698:5974-5993 Msa1410690:five_prime_UTR 40.0%
GGGGGTTGTATTTATTAGGT+TGG + tig0023698:5978-5997 Msa1410690:five_prime_UTR 40.0%
!! GCTCATTCTGATTTTGACCA+TGG + tig0023698:6095-6114 Msa1410690:CDS 40.0%
GCATAAAGTCATCCAATCCA+TGG - tig0023698:6115-6134 None:intergenic 40.0%
TGACTTTATGCGTGGTCATT+TGG + tig0023698:6124-6143 Msa1410690:CDS 40.0%
ATCCTCATCATCTTGTACAC+GGG - tig0023698:6183-6202 None:intergenic 40.0%
CATCCTCATCATCTTGTACA+CGG - tig0023698:6184-6203 None:intergenic 40.0%
ATCTGCTCAAAATTCGCGAA+TGG - tig0023698:6292-6311 None:intergenic 40.0%
! ATTCGCGAATTTTGAGCAGA+TGG + tig0023698:6291-6310 Msa1410690:CDS 40.0%
! TTCGCGAATTTTGAGCAGAT+GGG + tig0023698:6292-6311 Msa1410690:CDS 40.0%
TTTACATACGGTGTCCATGT+TGG + tig0023698:6391-6410 Msa1410690:CDS 40.0%
!!! TGGATTCCTCTTTTTTGAGG+GGG + tig0023698:6411-6430 Msa1410690:CDS 40.0%
AGACATGGTACTTGACACAT+TGG - tig0023698:6603-6622 None:intergenic 40.0%
CTCATGATCAGATTGGATCA+CGG + tig0023698:6696-6715 Msa1410690:CDS 40.0%
GAGAGTTAGACAGATTGTTC+GGG + tig0023698:6787-6806 Msa1410690:CDS 40.0%
AGAGTTAGACAGATTGTTCG+GGG + tig0023698:6788-6807 Msa1410690:CDS 40.0%
! ATCTGTGGTTGGTGTTTCTT+TGG - tig0023698:6856-6875 None:intergenic 40.0%
GAAAGACAAAGAGAGCTTGA+GGG + tig0023698:7124-7143 Msa1410690:CDS 40.0%
AAGTGAAAACACCATGACCA+AGG - tig0023698:7253-7272 None:intergenic 40.0%
! GTTGCTTTCATAATCTGCTC+AGG - tig0023698:7290-7309 None:intergenic 40.0%
CTTCTGTTCTCTGATATGTC+TGG + tig0023698:7442-7461 Msa1410690:intron 40.0%
! TTTTCACGCTCAACGTCTTA+AGG - tig0023698:7667-7686 None:intergenic 40.0%
GTTGAGCGTGAAAAACTGTT+TGG + tig0023698:7673-7692 Msa1410690:intron 40.0%
CAAGGACGCTCTATGTTATA+AGG - tig0023698:7718-7737 None:intergenic 40.0%
ATACCTGTGTGCATCTAACT+TGG + tig0023698:8209-8228 Msa1410690:intron 40.0%
TCATTTCAGTCATTGCTCAG+AGG + tig0023698:8297-8316 Msa1410690:intron 40.0%
ACGAAACTGTTGAAGATGAG+AGG + tig0023698:8334-8353 Msa1410690:CDS 40.0%
AATTCACTTGCAGCTGTAGA+AGG - tig0023698:8363-8382 None:intergenic 40.0%
CAGATTGAAATGATGAGCTG+TGG - tig0023698:8447-8466 None:intergenic 40.0%
GAAGTAACTTCAGTGCACAT+TGG + tig0023698:8734-8753 Msa1410690:intron 40.0%
TTCTGTGGTTCAATGAGACA+AGG + tig0023698:8970-8989 Msa1410690:intron 40.0%
TCTGTGGTTCAATGAGACAA+GGG + tig0023698:8971-8990 Msa1410690:intron 40.0%
AATGAGAAGAAGCAAGCCAA+GGG - tig0023698:9015-9034 None:intergenic 40.0%
AAATGAGAAGAAGCAAGCCA+AGG - tig0023698:9016-9035 None:intergenic 40.0%
TATTGCTTCCAATGCATCTG+TGG + tig0023698:9051-9070 Msa1410690:intron 40.0%
CACATTTACCACAGATGCAT+TGG - tig0023698:9062-9081 None:intergenic 40.0%
CCTGAACACCATATAAGTGT+TGG - tig0023698:9154-9173 None:intergenic 40.0%
CCAACACTTATATGGTGTTC+AGG + tig0023698:9151-9170 Msa1410690:intron 40.0%
ACTTATATGGTGTTCAGGGA+GGG + tig0023698:9156-9175 Msa1410690:intron 40.0%
ATTTGATGTGGCATCAGGAT+TGG - tig0023698:9226-9245 None:intergenic 40.0%
CGTCAGTTTCCTATTCAAAC+AGG + tig0023698:9354-9373 Msa1410690:CDS 40.0%
TCCGAAGTTCCTGTTTGAAT+AGG - tig0023698:9366-9385 None:intergenic 40.0%
TGGCAAGAAGCTAGTAATCA+AGG + tig0023698:9411-9430 Msa1410690:CDS 40.0%
CAAGAAGCTAGTAATCAAGG+AGG + tig0023698:9414-9433 Msa1410690:CDS 40.0%
CTAGTAATCAAGGAGGGAAT+TGG + tig0023698:9421-9440 Msa1410690:CDS 40.0%
! GAATTTCTGGGAGTTTCTTG+TGG - tig0023698:9543-9562 None:intergenic 40.0%
AAACTCCCAGAAATTCAGCT+GGG + tig0023698:9547-9566 Msa1410690:CDS 40.0%
CAAATTCTTTGAGCTTCCAG+TGG - tig0023698:9585-9604 None:intergenic 40.0%
CACTGGAAGCTCAAAGAATT+TGG + tig0023698:9583-9602 Msa1410690:CDS 40.0%
!! CTGTTGGTAATTGGTCTGAA+GGG + tig0023698:9628-9647 Msa1410690:CDS 40.0%
ACCATGCCTTGTGATAGTTA+TGG + tig0023698:10010-10029 Msa1410690:intron 40.0%
TCCATAACTATCACAAGGCA+TGG - tig0023698:10014-10033 None:intergenic 40.0%
CAGTCATATGTTGAAAGGCA+AGG + tig0023698:10151-10170 Msa1410690:CDS 40.0%
CACCAAGATTTGCATCAAAC+TGG + tig0023698:10349-10368 Msa1410690:CDS 40.0%
CCGGTTCAAGATGTTAGTTA+AGG + tig0023698:10623-10642 Msa1410690:intron 40.0%
GGGTACACTTGCATAAGTAA+AGG - tig0023698:10896-10915 None:intergenic 40.0%
!! CATCTGATGATGGGTCTAAA+TGG + tig0023698:11347-11366 Msa1410690:CDS 40.0%
!! TCTGATGATGGGTCTAAATG+GGG + tig0023698:11349-11368 Msa1410690:CDS 40.0%
! AAATGGGGGCATGTGAAAAA+AGG + tig0023698:11364-11383 Msa1410690:CDS 40.0%
TGTGCTAGTGAGTTAATTCG+TGG + tig0023698:11570-11589 Msa1410690:CDS 40.0%
!! GAGCTTGTTAATCTCAGTTC+TGG + tig0023698:11701-11720 Msa1410690:three_prime_UTR 40.0%
!! TTAGTTTGCATGTGCAAGCT+CGG - tig0023698:11919-11938 None:intergenic 40.0%
CCCTAGAAAAATCGTGGGAA+TGG - tig0023698:5589-5608 None:intergenic 45.0%
GTGGGTATGATCGTGAATTG+AGG - tig0023698:5632-5651 None:intergenic 45.0%
GAAATTGACGTACCTGAGAG+TGG - tig0023698:5651-5670 None:intergenic 45.0%
TTATCAGGTGGCATGTGTGT+TGG + tig0023698:5788-5807 Msa1410690:intron 45.0%
!! TGTTGGTTTAGCAATTCGGG+GGG + tig0023698:5960-5979 Msa1410690:five_prime_UTR 45.0%
! TGTGGTGGAGATTCTGTTTG+AGG + tig0023698:6027-6046 Msa1410690:five_prime_UTR 45.0%
GAATGAGCATCAGCAGATTC+AGG - tig0023698:6083-6102 None:intergenic 45.0%
GGATTGGATGACTTTATGCG+TGG + tig0023698:6116-6135 Msa1410690:CDS 45.0%
TTCCCGTGTACAAGATGATG+AGG + tig0023698:6178-6197 Msa1410690:CDS 45.0%
ACGAGAGTGATCAGTTGGTT+CGG + tig0023698:6204-6223 Msa1410690:CDS 45.0%
! GAATCGTGAGTCTGAGTTGA+TGG + tig0023698:6358-6377 Msa1410690:CDS 45.0%
AAAGGATGAGGGAAAGGTTG+AGG + tig0023698:6552-6571 Msa1410690:CDS 45.0%
AAGTGAGAATCGAGGGAGTT+TGG + tig0023698:6634-6653 Msa1410690:CDS 45.0%
AGTGAGAATCGAGGGAGTTT+GGG + tig0023698:6635-6654 Msa1410690:CDS 45.0%
ACCTGGTCTCATGATCAGAT+TGG + tig0023698:6689-6708 Msa1410690:CDS 45.0%
TCCAATCTGATCATGAGACC+AGG - tig0023698:6693-6712 None:intergenic 45.0%
ATTGGATCACGGAATGCACT+TGG + tig0023698:6707-6726 Msa1410690:CDS 45.0%
TTGGATCACGGAATGCACTT+GGG + tig0023698:6708-6727 Msa1410690:CDS 45.0%
AATGCACTTGGGAATCGTGA+TGG + tig0023698:6719-6738 Msa1410690:CDS 45.0%
ATGCACTTGGGAATCGTGAT+GGG + tig0023698:6720-6739 Msa1410690:CDS 45.0%
TGATCTTGGCGAAGTTGAGA+GGG + tig0023698:6763-6782 Msa1410690:CDS 45.0%
TTAGACAGATTGTTCGGGGA+TGG + tig0023698:6792-6811 Msa1410690:CDS 45.0%
ACACCAACCACAGATCAGAA+TGG + tig0023698:6861-6880 Msa1410690:CDS 45.0%
AAGCCATTCTGATCTGTGGT+TGG - tig0023698:6867-6886 None:intergenic 45.0%
AACCACAGATCAGAATGGCT+TGG + tig0023698:6866-6885 Msa1410690:CDS 45.0%
TGAGAGGGTGAGAATTGTCA+GGG + tig0023698:6901-6920 Msa1410690:CDS 45.0%
GGTGAGAATTGTCAGGGAAT+GGG + tig0023698:6907-6926 Msa1410690:CDS 45.0%
GACTTACTTGAGCATCCCTA+CGG - tig0023698:6970-6989 None:intergenic 45.0%
ATATCACGAGTTCGATCAGC+TGG - tig0023698:7001-7020 None:intergenic 45.0%
AACGTCAACCAGAGCATGTT+CGG + tig0023698:7038-7057 Msa1410690:CDS 45.0%
GGAAAGACAAAGAGAGCTTG+AGG + tig0023698:7123-7142 Msa1410690:CDS 45.0%
AAGAGAGCTTGAGGGTTTGT+TGG + tig0023698:7132-7151 Msa1410690:CDS 45.0%
TGCTCATCGCAATCGTATTC+AGG + tig0023698:7177-7196 Msa1410690:CDS 45.0%
!! TGGTACTCTGATTTGGACTG+TGG + tig0023698:7462-7481 Msa1410690:intron 45.0%
CTTCAACAGTTTCGTTTCGG+AGG - tig0023698:8329-8348 None:intergenic 45.0%
TCAGTTAAGACAACGGCACA+CGG + tig0023698:8386-8405 Msa1410690:CDS 45.0%
AGACACCTCCAAGATACAGA+AGG + tig0023698:8562-8581 Msa1410690:intron 45.0%
GTAACTTCAGTGCACATTGG+TGG + tig0023698:8737-8756 Msa1410690:intron 45.0%
CTGTGGTTCAATGAGACAAG+GGG + tig0023698:8972-8991 Msa1410690:intron 45.0%
TGTGGTTCAATGAGACAAGG+GGG + tig0023698:8973-8992 Msa1410690:intron 45.0%
ATGAGAAGAAGCAAGCCAAG+GGG - tig0023698:9014-9033 None:intergenic 45.0%
CACTTATATGGTGTTCAGGG+AGG + tig0023698:9155-9174 Msa1410690:intron 45.0%
CTTATATGGTGTTCAGGGAG+GGG + tig0023698:9157-9176 Msa1410690:intron 45.0%
! GATTGGTGCTTGATTGACCA+CGG - tig0023698:9209-9228 None:intergenic 45.0%
TAATCAAGGAGGGAATTGGC+AGG + tig0023698:9425-9444 Msa1410690:CDS 45.0%
CAAATTACCGAAAATGGGGG+AGG + tig0023698:9450-9469 Msa1410690:CDS 45.0%
AACTGGCCGCAGAGAATTAA+TGG + tig0023698:9474-9493 Msa1410690:CDS 45.0%
AGTTTCTTGTGGCCAATCAC+TGG - tig0023698:9532-9551 None:intergenic 45.0%
GAAACTCCCAGAAATTCAGC+TGG + tig0023698:9546-9565 Msa1410690:CDS 45.0%
AACTCCCAGAAATTCAGCTG+GGG + tig0023698:9548-9567 Msa1410690:CDS 45.0%
TCATCCCCAGCTGAATTTCT+GGG - tig0023698:9555-9574 None:intergenic 45.0%
ATCATCCCCAGCTGAATTTC+TGG - tig0023698:9556-9575 None:intergenic 45.0%
GGAAGCTCAAAGAATTTGGC+AGG + tig0023698:9587-9606 Msa1410690:CDS 45.0%
TTTGGCAGGACGATAACACA+AGG + tig0023698:9601-9620 Msa1410690:CDS 45.0%
TTGGCAGGACGATAACACAA+GGG + tig0023698:9602-9621 Msa1410690:CDS 45.0%
GATAACACAAGGGAAGCTGT+TGG + tig0023698:9612-9631 Msa1410690:CDS 45.0%
!! CAAGGGAAGCTGTTGGTAAT+TGG + tig0023698:9619-9638 Msa1410690:CDS 45.0%
!! GCTGTTGGTAATTGGTCTGA+AGG + tig0023698:9627-9646 Msa1410690:CDS 45.0%
! GCCGTAGTGTTCCTTTTAGA+AGG + tig0023698:9673-9692 Msa1410690:CDS 45.0%
AGCTAAGAGAACTTCTGAGC+AGG + tig0023698:9742-9761 Msa1410690:CDS 45.0%
GTATCTAACCTTCTTCGGAG+TGG + tig0023698:10100-10119 Msa1410690:CDS 45.0%
AAGGTCATGCACCAATTGAC+TGG + tig0023698:10170-10189 Msa1410690:CDS 45.0%
AGGTCATGCACCAATTGACT+GGG + tig0023698:10171-10190 Msa1410690:CDS 45.0%
CGATGCAAATCCCAGTCAAT+TGG - tig0023698:10184-10203 None:intergenic 45.0%
CAGGGTGATGAACGTAATGA+GGG + tig0023698:10253-10272 Msa1410690:CDS 45.0%
AGCCATTAACAGACCTTCAC+CGG + tig0023698:10285-10304 Msa1410690:CDS 45.0%
!! TGCAAATCTTGGTGCCAAAG+TGG - tig0023698:10343-10362 None:intergenic 45.0%
!! TTTTGATTCTGACTGGGAGC+AGG + tig0023698:10963-10982 Msa1410690:intron 45.0%
GATATGGCAAGACTTCAGCA+AGG + tig0023698:11015-11034 Msa1410690:CDS 45.0%
AAGGCATGAATCACATGCAG+AGG + tig0023698:11034-11053 Msa1410690:CDS 45.0%
GAATCACATGCAGAGGATGT+TGG + tig0023698:11041-11060 Msa1410690:CDS 45.0%
TTCCAGTTGCATATCCATGC+AGG - tig0023698:11070-11089 None:intergenic 45.0%
ATTGCAGAGATCTGTCAGAC+AGG + tig0023698:11089-11108 Msa1410690:CDS 45.0%
!! TATTTGCAGGATTGGCTGCT+GGG + tig0023698:11323-11342 Msa1410690:intron 45.0%
!! CTGATGATGGGTCTAAATGG+GGG + tig0023698:11350-11369 Msa1410690:CDS 45.0%
GCTAGTGAGTTAATTCGTGG+AGG + tig0023698:11573-11592 Msa1410690:CDS 45.0%
AGTGAGTTAATTCGTGGAGG+AGG + tig0023698:11576-11595 Msa1410690:CDS 45.0%
!! TAAAAAAAAAACTAATATAT+GGG - tig0023698:11477-11496 None:intergenic 5.0%
!! ATAAAAAAAAAACTAATATA+TGG - tig0023698:11478-11497 None:intergenic 5.0%
TCACGATCATACCCACTCTC+AGG + tig0023698:5636-5655 Msa1410690:five_prime_UTR 50.0%
GGATCAGCGGAATGGAAGTA+GGG - tig0023698:5680-5699 None:intergenic 50.0%
AGGATCAGCGGAATGGAAGT+AGG - tig0023698:5681-5700 None:intergenic 50.0%
GGATGACGAGAGTGATCAGT+TGG + tig0023698:6199-6218 Msa1410690:CDS 50.0%
!! AGAGTGATCAGTTGGTTCGG+AGG + tig0023698:6207-6226 Msa1410690:CDS 50.0%
!! ATCAGTTGGTTCGGAGGAGA+CGG + tig0023698:6213-6232 Msa1410690:CDS 50.0%
AGACGGAGGTCTGATCTTGA+AGG + tig0023698:6230-6249 Msa1410690:CDS 50.0%
TTATCATCTCCTGCGCCTGT+CGG - tig0023698:6322-6341 None:intergenic 50.0%
TCTCCTACTTCTGGTCAGGA+GGG + tig0023698:6440-6459 Msa1410690:CDS 50.0%
CGTCTTCCATTCTGCAGATG+TGG + tig0023698:6489-6508 Msa1410690:CDS 50.0%
TTCACGCCACATCTGCAGAA+TGG - tig0023698:6498-6517 None:intergenic 50.0%
TCTGCAGATGTGGCGTGAAT+TGG + tig0023698:6499-6518 Msa1410690:CDS 50.0%
TGTTGAATCGGGCACGTGAA+AGG + tig0023698:6534-6553 Msa1410690:CDS 50.0%
CACGTGAAAGGATGAGGGAA+AGG + tig0023698:6546-6565 Msa1410690:CDS 50.0%
TCCCTCGATTCTCACTTCCT+CGG - tig0023698:6631-6650 None:intergenic 50.0%
GTGAGAATCGAGGGAGTTTG+GGG + tig0023698:6636-6655 Msa1410690:CDS 50.0%
TGAGAATCGAGGGAGTTTGG+GGG + tig0023698:6637-6656 Msa1410690:CDS 50.0%
!! GAATCGTGATGGGTCTAGCA+GGG + tig0023698:6730-6749 Msa1410690:CDS 50.0%
AGGGAGCAATCTCCTGATCT+TGG + tig0023698:6749-6768 Msa1410690:CDS 50.0%
CTCTCAACTTCGCCAAGATC+AGG - tig0023698:6764-6783 None:intergenic 50.0%
CTGATCTTGGCGAAGTTGAG+AGG + tig0023698:6762-6781 Msa1410690:CDS 50.0%
ACAGATTGTTCGGGGATGGA+TGG + tig0023698:6796-6815 Msa1410690:CDS 50.0%
CTCCAAGCCATTCTGATCTG+TGG - tig0023698:6871-6890 None:intergenic 50.0%
TTGGAGAAACAGAGCGTGAG+AGG + tig0023698:6885-6904 Msa1410690:CDS 50.0%
TGGAGAAACAGAGCGTGAGA+GGG + tig0023698:6886-6905 Msa1410690:CDS 50.0%
GTGAGAGGGTGAGAATTGTC+AGG + tig0023698:6900-6919 Msa1410690:CDS 50.0%
GGGTGAGAATTGTCAGGGAA+TGG + tig0023698:6906-6925 Msa1410690:CDS 50.0%
! CAAATGACTAGCCAACAGCG+AGG + tig0023698:6932-6951 Msa1410690:CDS 50.0%
GCTCTGGTTGACGTTCATCA+TGG - tig0023698:7033-7052 None:intergenic 50.0%
! GACTGTGGCTTTTCTCTCCT+TGG + tig0023698:7477-7496 Msa1410690:intron 50.0%
TTTCCACGCTCAACGTCTCA+AGG - tig0023698:7736-7755 None:intergenic 50.0%
AAATATCTGCCACTCTGGGC+AGG - tig0023698:7841-7860 None:intergenic 50.0%
CAGCCAAGTTAGATGCACAC+AGG - tig0023698:8215-8234 None:intergenic 50.0%
TCACTTGCAGCTGTAGAAGG+AGG - tig0023698:8360-8379 None:intergenic 50.0%
ACTGACGTGCATCAGTTTCC+AGG - tig0023698:9341-9360 None:intergenic 50.0%
! CCAGTTTCCTCCCCCATTTT+CGG - tig0023698:9460-9479 None:intergenic 50.0%
ATGGAAGGGAAGCCAGTGAT+TGG + tig0023698:9517-9536 Msa1410690:CDS 50.0%
CTTTGAGCTTCCAGTGGATG+AGG - tig0023698:9579-9598 None:intergenic 50.0%
CGATTCCTTGAAGCTGCAGA+AGG - tig0023698:9654-9673 None:intergenic 50.0%
! TCCAACTGGCATTGGAGAGA+TGG + tig0023698:9835-9854 Msa1410690:intron 50.0%
TCCATCTCTCCAATGCCAGT+TGG - tig0023698:9839-9858 None:intergenic 50.0%
CTATCACAAGGCATGGTGCA+TGG - tig0023698:10007-10026 None:intergenic 50.0%
GAGTGGTTTCCGTGAAAGTC+TGG + tig0023698:10117-10136 Msa1410690:CDS 50.0%
GTTCATCACCCTGCTGATCA+GGG - tig0023698:10246-10265 None:intergenic 50.0%
GCAGGGTGATGAACGTAATG+AGG + tig0023698:10252-10271 Msa1410690:CDS 50.0%
CACCGGTGAAGGTCTGTTAA+TGG - tig0023698:10290-10309 None:intergenic 50.0%
!! TCTTGGTGCCAAAGTGGTTG+TGG - tig0023698:10337-10356 None:intergenic 50.0%
CACAATTTCAGAGCGGTGCA+TGG - tig0023698:10389-10408 None:intergenic 50.0%
ATTCTGACTGGGAGCAGGAA+TGG + tig0023698:10968-10987 Msa1410690:intron 50.0%
TTCTGACTGGGAGCAGGAAT+GGG + tig0023698:10969-10988 Msa1410690:intron 50.0%
TCACATGCAGAGGATGTTGG+AGG + tig0023698:11044-11063 Msa1410690:CDS 50.0%
AACCGCTCAGCTGGTGAAAA+TGG + tig0023698:11129-11148 Msa1410690:CDS 50.0%
! CACCATTTTCACCAGCTGAG+CGG - tig0023698:11134-11153 None:intergenic 50.0%
!! CTATTTGCAGGATTGGCTGC+TGG + tig0023698:11322-11341 Msa1410690:intron 50.0%
CTGCTGGGACATCTGATGAT+GGG + tig0023698:11338-11357 Msa1410690:CDS 50.0%
ACAATTGGCGCTCGGCATAA+AGG - tig0023698:11609-11628 None:intergenic 50.0%
GCTCTGACCACCTCAACAAT+TGG - tig0023698:11624-11643 None:intergenic 50.0%
!! TCTCAGTTCTGGATGTCTCG+AGG + tig0023698:11712-11731 Msa1410690:three_prime_UTR 50.0%
TCAGGTGGCATGTGTGTTGG+TGG + tig0023698:5791-5810 Msa1410690:intron 55.0%
! CAGGTGGCATGTGTGTTGGT+GGG + tig0023698:5792-5811 Msa1410690:intron 55.0%
! AGGTGGCATGTGTGTTGGTG+GGG + tig0023698:5793-5812 Msa1410690:intron 55.0%
TAGCAGAGTCATCAGCTGCG+CGG + tig0023698:6261-6280 Msa1410690:CDS 55.0%
TATCATCTCCTGCGCCTGTC+GGG - tig0023698:6321-6340 None:intergenic 55.0%
!! GTCTGAGTTGATGGCGCTTG+CGG + tig0023698:6367-6386 Msa1410690:CDS 55.0%
!! TCTGAGTTGATGGCGCTTGC+GGG + tig0023698:6368-6387 Msa1410690:CDS 55.0%
GGCGCTTGCGGGTTTACATA+CGG + tig0023698:6379-6398 Msa1410690:CDS 55.0%
CTGCGACCCCCTCAAAAAAG+AGG - tig0023698:6420-6439 None:intergenic 55.0%
GCAGTCTCCTACTTCTGGTC+AGG + tig0023698:6436-6455 Msa1410690:CDS 55.0%
GTCTCCTACTTCTGGTCAGG+AGG + tig0023698:6439-6458 Msa1410690:CDS 55.0%
CTCCTACTTCTGGTCAGGAG+GGG + tig0023698:6441-6460 Msa1410690:CDS 55.0%
TCCTACTTCTGGTCAGGAGG+GGG + tig0023698:6442-6461 Msa1410690:CDS 55.0%
TGTTGAGAGACCGAGCACTC+AGG + tig0023698:6466-6485 Msa1410690:CDS 55.0%
ATGGAAGACGCCTGAGTGCT+CGG - tig0023698:6479-6498 None:intergenic 55.0%
GCAGATGTGGCGTGAATTGG+AGG + tig0023698:6502-6521 Msa1410690:CDS 55.0%
ATCGGGCACGTGAAAGGATG+AGG + tig0023698:6540-6559 Msa1410690:CDS 55.0%
TCGGGCACGTGAAAGGATGA+GGG + tig0023698:6541-6560 Msa1410690:CDS 55.0%
AGTACCATGTCTGACAGCCG+AGG + tig0023698:6611-6630 Msa1410690:CDS 55.0%
ACTTCCTCGGCTGTCAGACA+TGG - tig0023698:6618-6637 None:intergenic 55.0%
AGCCGAGGAAGTGAGAATCG+AGG + tig0023698:6626-6645 Msa1410690:CDS 55.0%
GCCGAGGAAGTGAGAATCGA+GGG + tig0023698:6627-6646 Msa1410690:CDS 55.0%
!! GGAATCGTGATGGGTCTAGC+AGG + tig0023698:6729-6748 Msa1410690:CDS 55.0%
GTTCGGGGATGGATGGAAAG+TGG + tig0023698:6803-6822 Msa1410690:CDS 55.0%
GTCAACCAGAGCATGTTCGG+CGG + tig0023698:7041-7060 Msa1410690:CDS 55.0%
TCAACCAGAGCATGTTCGGC+GGG + tig0023698:7042-7061 Msa1410690:CDS 55.0%
ATGTTCGGCGGGACATGTTG+AGG + tig0023698:7053-7072 Msa1410690:CDS 55.0%
GTTGAGGTTGCGTGGAAGAC+AGG + tig0023698:7069-7088 Msa1410690:CDS 55.0%
TACAGATCACCTGCCCAGAG+TGG + tig0023698:7829-7848 Msa1410690:intron 55.0%
GGCACACGGTCTCTGGTATA+AGG + tig0023698:8400-8419 Msa1410690:CDS 55.0%
! AGAGGCACAGCCCACAACAT+AGG - tig0023698:8639-8658 None:intergenic 55.0%
TTACACCGAGTGTGTCCCCT+TGG + tig0023698:8996-9015 Msa1410690:intron 55.0%
CCAGGCTCCTAATCTGCTCT+TGG - tig0023698:9323-9342 None:intergenic 55.0%
CCAAGAGCAGATTAGGAGCC+TGG + tig0023698:9320-9339 Msa1410690:CDS 55.0%
CCGAAAATGGGGGAGGAAAC+TGG + tig0023698:9457-9476 Msa1410690:CDS 55.0%
TGGGGATGATCCTCATCCAC+TGG + tig0023698:9566-9585 Msa1410690:CDS 55.0%
AAGGGCCTTCTGCAGCTTCA+AGG + tig0023698:9646-9665 Msa1410690:CDS 55.0%
CACGGAAACCACTCCGAAGA+AGG - tig0023698:10111-10130 None:intergenic 55.0%
TGCTGATCAGGGTCTCGTTC+CGG - tig0023698:10235-10254 None:intergenic 55.0%
GAACGAGACCCTGATCAGCA+GGG + tig0023698:10235-10254 Msa1410690:CDS 55.0%
CGTTCATCACCCTGCTGATC+AGG - tig0023698:10247-10266 None:intergenic 55.0%
ACTGGTGGAGAAGGCAACAC+CGG - tig0023698:10307-10326 None:intergenic 55.0%
! TGGTGCCAAAGTGGTTGTGG+CGG - tig0023698:10334-10353 None:intergenic 55.0%
GGCCTGCATGGATATGCAAC+TGG + tig0023698:11065-11084 Msa1410690:CDS 55.0%
GCAGAGATCTGTCAGACAGG+AGG + tig0023698:11092-11111 Msa1410690:CDS 55.0%
TTCACCAGCTGAGCGGTTGA+GGG - tig0023698:11127-11146 None:intergenic 55.0%
TTTCACCAGCTGAGCGGTTG+AGG - tig0023698:11128-11147 None:intergenic 55.0%
GCTGCTGGGACATCTGATGA+TGG + tig0023698:11337-11356 Msa1410690:CDS 55.0%
ATGCCGAGCGCCAATTGTTG+AGG + tig0023698:11611-11630 Msa1410690:CDS 55.0%
CCACCTCAACAATTGGCGCT+CGG - tig0023698:11617-11636 None:intergenic 55.0%
!! AGTTGGTTCGGAGGAGACGG+AGG + tig0023698:6216-6235 Msa1410690:CDS 60.0%
GGGTCGCAGTCTCCTACTTC+TGG + tig0023698:6431-6450 Msa1410690:CDS 60.0%
AGCCAACAGCGAGGTTCACG+TGG + tig0023698:6941-6960 Msa1410690:CDS 60.0%
GCCAACAGCGAGGTTCACGT+GGG + tig0023698:6942-6961 Msa1410690:CDS 60.0%
TCCCACGTGAACCTCGCTGT+TGG - tig0023698:6946-6965 None:intergenic 60.0%
AGGTTCACGTGGGAGCCGTA+GGG + tig0023698:6952-6971 Msa1410690:CDS 60.0%
ATGTCCCGCCGAACATGCTC+TGG - tig0023698:7049-7068 None:intergenic 60.0%
CGGGACATGTTGAGGTTGCG+TGG + tig0023698:7061-7080 Msa1410690:CDS 60.0%
CGTCCTTGAGACGTTGAGCG+TGG + tig0023698:7730-7749 Msa1410690:intron 60.0%
AGACAACGGCACACGGTCTC+TGG + tig0023698:8393-8412 Msa1410690:CDS 60.0%
GCAAGCCAAGGGGACACACT+CGG - tig0023698:9004-9023 None:intergenic 60.0%
ATCAGGGTCTCGTTCCGGTG+AGG - tig0023698:10230-10249 None:intergenic 60.0%
GGAACGAGACCCTGATCAGC+AGG + tig0023698:10234-10253 Msa1410690:CDS 60.0%
GGAGAAGGCAACACCGGTGA+AGG - tig0023698:10301-10320 None:intergenic 60.0%
TTCCCCCGCCACAACCACTT+TGG + tig0023698:10326-10345 Msa1410690:CDS 60.0%
TGCCAAAGTGGTTGTGGCGG+GGG - tig0023698:10331-10350 None:intergenic 60.0%
GTGCCAAAGTGGTTGTGGCG+GGG - tig0023698:10332-10351 None:intergenic 60.0%
GGTGCCAAAGTGGTTGTGGC+GGG - tig0023698:10333-10352 None:intergenic 60.0%
GAGGATGTTGGAGGCCTGCA+TGG + tig0023698:11053-11072 Msa1410690:CDS 60.0%
CCGAGCGCCAATTGTTGAGG+TGG + tig0023698:11614-11633 Msa1410690:CDS 60.0%
CAGAGTCATCAGCTGCGCGG+AGG + tig0023698:6264-6283 Msa1410690:CDS 65.0%
GCCCCCTCCTGACCAGAAGT+AGG - tig0023698:6446-6465 None:intergenic 65.0%
GAGGTTCACGTGGGAGCCGT+AGG + tig0023698:6951-6970 Msa1410690:CDS 65.0%
!! TACGCCGACTCCTGCCTCAC+CGG + tig0023698:10213-10232 Msa1410690:CDS 65.0%
CGTTCCGGTGAGGCAGGAGT+CGG - tig0023698:10220-10239 None:intergenic 65.0%
! AGTGGTTGTGGCGGGGGAAC+TGG - tig0023698:10325-10344 None:intergenic 65.0%
!! GAGCAGATGGGCTGCCCGAC+AGG + tig0023698:6304-6323 Msa1410690:CDS 70.0%
GGTGAGGCAGGAGTCGGCGT+AGG - tig0023698:10214-10233 None:intergenic 70.0%
GGGTCTCGTTCCGGTGAGGC+AGG - tig0023698:10226-10245 None:intergenic 70.0%
GGCGGGGGAACTGGTGGAGA+AGG - tig0023698:10316-10335 None:intergenic 70.0%
! GGTTGTGGCGGGGGAACTGG+TGG - tig0023698:10322-10341 None:intergenic 70.0%
GCAGCCCTCAACCGCTCAGC+TGG + tig0023698:11120-11139 Msa1410690:CDS 70.0%
! ATGGGCTGCCCGACAGGCGC+AGG + tig0023698:6310-6329 Msa1410690:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0023698 gene 5500 11961 5500 ID=Msa1410690;Name=Msa1410690
tig0023698 mRNA 5500 11961 5500 ID=Msa1410690-mRNA-1;Parent=Msa1410690;Name=Msa1410690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=413|1|1|1|0.85|0.75|8|302|851
tig0023698 exon 5500 5657 5500 ID=Msa1410690-mRNA-1:exon:26682;Parent=Msa1410690-mRNA-1
tig0023698 exon 5795 7198 5795 ID=Msa1410690-mRNA-1:exon:26683;Parent=Msa1410690-mRNA-1
tig0023698 exon 8306 8421 8306 ID=Msa1410690-mRNA-1:exon:26684;Parent=Msa1410690-mRNA-1
tig0023698 exon 9173 9763 9173 ID=Msa1410690-mRNA-1:exon:26685;Parent=Msa1410690-mRNA-1
tig0023698 exon 10093 10405 10093 ID=Msa1410690-mRNA-1:exon:26686;Parent=Msa1410690-mRNA-1
tig0023698 exon 10985 11150 10985 ID=Msa1410690-mRNA-1:exon:26687;Parent=Msa1410690-mRNA-1
tig0023698 exon 11332 11434 11332 ID=Msa1410690-mRNA-1:exon:26688;Parent=Msa1410690-mRNA-1
tig0023698 exon 11542 11961 11542 ID=Msa1410690-mRNA-1:exon:26689;Parent=Msa1410690-mRNA-1
tig0023698 five_prime_UTR 5500 5657 5500 ID=Msa1410690-mRNA-1:five_prime_utr;Parent=Msa1410690-mRNA-1
tig0023698 five_prime_UTR 5795 6049 5795 ID=Msa1410690-mRNA-1:five_prime_utr;Parent=Msa1410690-mRNA-1
tig0023698 CDS 6050 7198 6050 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 8306 8421 8306 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 9173 9763 9173 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 10093 10405 10093 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 10985 11150 10985 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 11332 11434 11332 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 CDS 11542 11659 11542 ID=Msa1410690-mRNA-1:cds;Parent=Msa1410690-mRNA-1
tig0023698 three_prime_UTR 11660 11961 11660 ID=Msa1410690-mRNA-1:three_prime_utr;Parent=Msa1410690-mRNA-1
Gene Sequence

>Msa1410690

ATGACAGATTTTCAATCACTACAGCAGAAGCCTGAATCTGCTGATGCTCATTCTGATTTTGACCATGGATTGGATGACTTTATGCGTGGTCATTTGGACGATTGTATGTCATTTGCTTCGTGTAGTTCTTCCCGTGTACAAGATGATGAGGATGACGAGAGTGATCAGTTGGTTCGGAGGAGACGGAGGTCTGATCTTGAAGGAGATGATTTAGCAGAGTCATCAGCTGCGCGGAGGCGCCATTCGCGAATTTTGAGCAGATGGGCTGCCCGACAGGCGCAGGAGATGATAACTACTATTGAGAGGAGGAATCGTGAGTCTGAGTTGATGGCGCTTGCGGGTTTACATACGGTGTCCATGTTGGATTCCTCTTTTTTGAGGGGGTCGCAGTCTCCTACTTCTGGTCAGGAGGGGGCTGTTGAGAGACCGAGCACTCAGGCGTCTTCCATTCTGCAGATGTGGCGTGAATTGGAGGATGAACATATGTTGAATCGGGCACGTGAAAGGATGAGGGAAAGGTTGAGGCAGCAAAGAAGTTCTGATGCTAATACCAATGTGTCAAGTACCATGTCTGACAGCCGAGGAAGTGAGAATCGAGGGAGTTTGGGGGATGCAAGTGAAAGTGAAAATGATTATGGTACCTGGTCTCATGATCAGATTGGATCACGGAATGCACTTGGGAATCGTGATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTTCGGGGATGGATGGAAAGTGGTATTAGTGATCGTTCATCTAATGTGAGCCAAAGAAACACCAACCACAGATCAGAATGGCTTGGAGAAACAGAGCGTGAGAGGGTGAGAATTGTCAGGGAATGGGTGCAAATGACTAGCCAACAGCGAGGTTCACGTGGGAGCCGTAGGGATGCTCAAGTAAGTCAATCTGCTCCAGCTGATCGAACTCGTGATATTGCAGCTGACCATGATGAACGTCAACCAGAGCATGTTCGGCGGGACATGTTGAGGTTGCGTGGAAGACAGGCTCTAGTTGATTTGCTTGTTAGGGTAGAAAGGGAAAGACAAAGAGAGCTTGAGGGTTTGTTGGAGCATCGAGCTGTTTCTGATTTTGCTCATCGCAATCGTATTCAGTCATTGCTCAGAGGTAGATTCCTCCGAAACGAAACTGTTGAAGATGAGAGGCCTCCTTCTACAGCTGCAAGTGAATTAGTTCAGTTAAGACAACGGCACACGGTCTCTGGTATAAGGGAGGGGTTTCGCTCAAGATTAGAGAATATTGTCCGTGGTCAATCAAGCACCAATCCTGATGCCACATCAAATAGTAACATTGATGAAACAAGACATGATGAGAACCAATCAAACAATCTCATAGATGCACAACAAGAAAATTATGACCAAGAGCAGATTAGGAGCCTGGAAACTGATGCACGTCAGTTTCCTATTCAAACAGGAACTTCGGAGAGTAGCACAAGTGAACCTATTAATTGGCAAGAAGCTAGTAATCAAGGAGGGAATTGGCAGGAACAAATTACCGAAAATGGGGGAGGAAACTGGCCGCAGAGAATTAATGGTACATTAAATCATCTCAGAGATGGAAGGGAAGCCAGTGATTGGCCACAAGAAACTCCCAGAAATTCAGCTGGGGATGATCCTCATCCACTGGAAGCTCAAAGAATTTGGCAGGACGATAACACAAGGGAAGCTGTTGGTAATTGGTCTGAAGGGCCTTCTGCAGCTTCAAGGAATCGCCGTAGTGTTCCTTTTAGAAGGTTCAATAGATTTCATCCTCCTGACGATGATAATGTATACAGTATGGAGCTAAGAGAACTTCTGAGCAGGAGAAGTGTATCTAACCTTCTTCGGAGTGGTTTCCGTGAAAGTCTGGATCAACTAATACAGTCATATGTTGAAAGGCAAGGTCATGCACCAATTGACTGGGATTTGCATCGAAACTTGCCTACGCCGACTCCTGCCTCACCGGAACGAGACCCTGATCAGCAGGGTGATGAACGTAATGAGGGACAGCATGAAGCCATTAACAGACCTTCACCGGTGTTGCCTTCTCCACCAGTTCCCCCGCCACAACCACTTTGGCACCAAGATTTGCATCAAACTGGATGGTCTCGTCATACCATGCACCGCTCTGAAATTGAATGGGAGATAATGAATGATTTAAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGTTGGAGGCCTGCATGGATATGCAACTGGAATTGCAGAGATCTGTCAGACAGGAGGTCTCTGCAGCCCTCAACCGCTCAGCTGGTGAAAATGGATTGGCTGCTGGGACATCTGATGATGGGTCTAAATGGGGGCATGTGAAAAAAGGAACTTGCTGTGTATGTTGTGATAACCACATTGATTCGCTTTTGTACAGATGTGGACACATGTGCACATGTTCAAAATGTGCTAGTGAGTTAATTCGTGGAGGAGGTAAGTGTCCTTTATGCCGAGCGCCAATTGTTGAGGTGGTCAGAGCATATTCCATACTGTAA
Protein sequence

>Msa1410690

MTDFQSLQQKPESADAHSDFDHGLDDFMRGHLDDCMSFASCSSSRVQDDEDDESDQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASSILQMWRELEDEHMLNRARERMRERLRQQRSSDANTNVSSTMSDSRGSENRGSLGDASESENDYGTWSHDQIGSRNALGNRDGSSREQSPDLGEVERERVRQIVRGWMESGISDRSSNVSQRNTNHRSEWLGETERERVRIVREWVQMTSQQRGSRGSRRDAQVSQSAPADRTRDIAADHDERQPEHVRRDMLRLRGRQALVDLLVRVERERQRELEGLLEHRAVSDFAHRNRIQSLLRGRFLRNETVEDERPPSTAASELVQLRQRHTVSGIREGFRSRLENIVRGQSSTNPDATSNSNIDETRHDENQSNNLIDAQQENYDQEQIRSLETDARQFPIQTGTSESSTSEPINWQEASNQGGNWQEQITENGGGNWPQRINGTLNHLRDGREASDWPQETPRNSAGDDPHPLEAQRIWQDDNTREAVGNWSEGPSAASRNRRSVPFRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGHAPIDWDLHRNLPTPTPASPERDPDQQGDERNEGQHEAINRPSPVLPSPPVPPPQPLWHQDLHQTGWSRHTMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLAAGTSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCASELIRGGGKCPLCRAPIVEVVRAYSIL*