Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934840 | KAG7559462.1 | 65.571 | 700 | 165 | 8 | 1 | 664 | 1 | 660 | 0.0 | 881 |
| Msa0934840 | KAG7559462.1 | 67.057 | 683 | 134 | 7 | 2 | 648 | 344 | 971 | 0.0 | 873 |
| Msa0934840 | KAG7559462.1 | 68.299 | 735 | 174 | 8 | 1 | 684 | 973 | 1699 | 0.0 | 979 |
| Msa0934840 | KAG7559462.1 | 70.499 | 661 | 142 | 6 | 38 | 648 | 660 | 1317 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934840 | sp|Q9SXP2|FDH1_ORYSJ | 78.042 | 378 | 48 | 3 | 1 | 353 | 1 | 368 | 0.0 | 582 |
| Msa0934840 | sp|Q9SXP2|FDH1_ORYSJ | 80.737 | 353 | 43 | 2 | 358 | 685 | 24 | 376 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0934840 | 0.814551 | 1.454557e-51 | -8.615850e-47 |
| Msa0015090 | Msa0934840 | 0.812010 | 5.257518e-51 | -8.615850e-47 |
| Msa0016510 | Msa0934840 | 0.848723 | 5.110888e-60 | -8.615850e-47 |
| Msa0020390 | Msa0934840 | 0.835351 | 1.764658e-56 | -8.615850e-47 |
| Msa0038870 | Msa0934840 | 0.810623 | 1.051312e-50 | -8.615850e-47 |
| Msa0047460 | Msa0934840 | 0.966553 | 4.488219e-126 | -8.615850e-47 |
| Msa0049750 | Msa0934840 | 0.819065 | 1.412195e-52 | -8.615850e-47 |
| Msa0065950 | Msa0934840 | 0.834415 | 3.036609e-56 | -8.615850e-47 |
| Msa0074750 | Msa0934840 | 0.834551 | 2.806890e-56 | -8.615850e-47 |
| Msa0090550 | Msa0934840 | 0.808739 | 2.671163e-50 | -8.615850e-47 |
| Msa0096980 | Msa0934840 | 0.807292 | 5.429246e-50 | -8.615850e-47 |
| Msa0107400 | Msa0934840 | 0.822103 | 2.832509e-53 | -8.615850e-47 |
| Msa0118540 | Msa0934840 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0604290 | Msa0934840 | 0.827337 | 1.653903e-54 | -8.615850e-47 |
| Msa0609220 | Msa0934840 | 0.801802 | 7.582734e-49 | -8.615850e-47 |
| Msa0630950 | Msa0934840 | 0.815422 | 9.320506e-52 | -8.615850e-47 |
| Msa0640940 | Msa0934840 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
| Msa0657120 | Msa0934840 | 0.813086 | 3.057657e-51 | -8.615850e-47 |
| Msa0662630 | Msa0934840 | 0.804616 | 1.983277e-49 | -8.615850e-47 |
| Msa0679360 | Msa0934840 | 0.814024 | 1.902092e-51 | -8.615850e-47 |
| Msa0682680 | Msa0934840 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa0697720 | Msa0934840 | 0.814483 | 1.505522e-51 | -8.615850e-47 |
| Msa0701100 | Msa0934840 | 0.815985 | 6.981872e-52 | -8.615850e-47 |
| Msa0709120 | Msa0934840 | 0.839619 | 1.421458e-57 | -8.615850e-47 |
| Msa0732880 | Msa0934840 | 0.823601 | 1.268346e-53 | -8.615850e-47 |
| Msa0743530 | Msa0934840 | 0.800113 | 1.678427e-48 | -8.615850e-47 |
| Msa0765180 | Msa0934840 | 0.825400 | 4.785009e-54 | -8.615850e-47 |
| Msa0789560 | Msa0934840 | 0.822957 | 1.794222e-53 | -8.615850e-47 |
| Msa0812950 | Msa0934840 | 0.806534 | 7.852026e-50 | -8.615850e-47 |
| Msa0139670 | Msa0934840 | 0.840894 | 6.604223e-58 | -8.615850e-47 |
| Msa0145010 | Msa0934840 | 0.815564 | 8.668318e-52 | -8.615850e-47 |
| Msa0146080 | Msa0934840 | 0.802700 | 4.954396e-49 | -8.615850e-47 |
| Msa0153980 | Msa0934840 | 0.807716 | 4.411708e-50 | -8.615850e-47 |
| Msa0159420 | Msa0934840 | 0.807511 | 4.877769e-50 | -8.615850e-47 |
| Msa0164910 | Msa0934840 | 0.800636 | 1.313215e-48 | -8.615850e-47 |
| Msa0171980 | Msa0934840 | 0.813922 | 2.003216e-51 | -8.615850e-47 |
| Msa0183870 | Msa0934840 | 0.820323 | 7.287132e-53 | -8.615850e-47 |
| Msa0190250 | Msa0934840 | 0.822211 | 2.674004e-53 | -8.615850e-47 |
| Msa0191070 | Msa0934840 | 0.806880 | 6.635468e-50 | -8.615850e-47 |
| Msa0203110 | Msa0934840 | 0.838808 | 2.307141e-57 | -8.615850e-47 |
| Msa0223330 | Msa0934840 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0231790 | Msa0934840 | 0.804735 | 1.872606e-49 | -8.615850e-47 |
| Msa0233370 | Msa0934840 | 0.827073 | 1.913571e-54 | -8.615850e-47 |
| Msa0376600 | Msa0934840 | 0.826196 | 3.097322e-54 | -8.615850e-47 |
| Msa0382310 | Msa0934840 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa0382370 | Msa0934840 | 0.801287 | 9.669976e-49 | -8.615850e-47 |
| Msa0385500 | Msa0934840 | 0.803246 | 3.819576e-49 | -8.615850e-47 |
| Msa0389510 | Msa0934840 | 0.803898 | 2.798781e-49 | -8.615850e-47 |
| Msa0390530 | Msa0934840 | 0.811512 | 6.745088e-51 | -8.615850e-47 |
| Msa0395980 | Msa0934840 | 0.804919 | 1.714356e-49 | -8.615850e-47 |
| Msa0403490 | Msa0934840 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0403770 | Msa0934840 | 0.836395 | 9.594785e-57 | -8.615850e-47 |
| Msa0431210 | Msa0934840 | 0.814559 | 1.448665e-51 | -8.615850e-47 |
| Msa0244970 | Msa0934840 | 0.821184 | 4.621801e-53 | -8.615850e-47 |
| Msa0244980 | Msa0934840 | 0.815485 | 9.026813e-52 | -8.615850e-47 |
| Msa0246250 | Msa0934840 | 0.807274 | 5.475595e-50 | -8.615850e-47 |
| Msa0257490 | Msa0934840 | 0.829418 | 5.205801e-55 | -8.615850e-47 |
| Msa0283420 | Msa0934840 | 0.834621 | 2.696593e-56 | -8.615850e-47 |
| Msa0284820 | Msa0934840 | 0.846670 | 1.877315e-59 | -8.615850e-47 |
| Msa0296790 | Msa0934840 | 0.828687 | 7.825521e-55 | -8.615850e-47 |
| Msa0296920 | Msa0934840 | 0.806032 | 1.001456e-49 | -8.615850e-47 |
| Msa0301170 | Msa0934840 | 0.809474 | 1.858438e-50 | -8.615850e-47 |
| Msa0311720 | Msa0934840 | 0.804163 | 2.464378e-49 | -8.615850e-47 |
| Msa0320430 | Msa0934840 | 0.824365 | 8.397279e-54 | -8.615850e-47 |
| Msa0321690 | Msa0934840 | 0.826555 | 2.543833e-54 | -8.615850e-47 |
| Msa0323560 | Msa0934840 | 0.836827 | 7.446851e-57 | -8.615850e-47 |
| Msa0331020 | Msa0934840 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0482940 | Msa0934840 | 0.804269 | 2.342523e-49 | -8.615850e-47 |
| Msa0491000 | Msa0934840 | 0.805367 | 1.381214e-49 | -8.615850e-47 |
| Msa0510840 | Msa0934840 | 0.815076 | 1.112334e-51 | -8.615850e-47 |
| Msa0518170 | Msa0934840 | 0.815632 | 8.370013e-52 | -8.615850e-47 |
| Msa0520270 | Msa0934840 | 0.816749 | 4.710205e-52 | -8.615850e-47 |
| Msa0527740 | Msa0934840 | 0.838135 | 3.442930e-57 | -8.615850e-47 |
| Msa0534410 | Msa0934840 | 0.814203 | 1.736518e-51 | -8.615850e-47 |
| Msa0542560 | Msa0934840 | 0.824643 | 7.221488e-54 | -8.615850e-47 |
| Msa0547160 | Msa0934840 | 0.800586 | 1.344256e-48 | -8.615850e-47 |
| Msa0560500 | Msa0934840 | 0.800890 | 1.165584e-48 | -8.615850e-47 |
| Msa0561240 | Msa0934840 | 0.807268 | 5.492038e-50 | -8.615850e-47 |
| Msa0580230 | Msa0934840 | 0.805051 | 1.608603e-49 | -8.615850e-47 |
| Msa0588240 | Msa0934840 | 0.811413 | 7.087616e-51 | -8.615850e-47 |
| Msa0590650 | Msa0934840 | 0.800342 | 1.507487e-48 | -8.615850e-47 |
| Msa0600450 | Msa0934840 | 0.806779 | 6.968949e-50 | -8.615850e-47 |
| Msa0844610 | Msa0934840 | 0.802181 | 6.336652e-49 | -8.615850e-47 |
| Msa0872440 | Msa0934840 | 0.817050 | 4.030990e-52 | -8.615850e-47 |
| Msa0934840 | Msa0971850 | 0.945550 | 2.475707e-104 | -8.615850e-47 |
| Msa0934840 | Msa0994370 | 0.815216 | 1.035828e-51 | -8.615850e-47 |
| Msa0934840 | Msa1006710 | 0.820582 | 6.355045e-53 | -8.615850e-47 |
| Msa0934840 | Msa1013070 | 0.829857 | 4.069761e-55 | -8.615850e-47 |
| Msa0934840 | Msa1023180 | 0.818089 | 2.351092e-52 | -8.615850e-47 |
| Msa0934840 | Msa1026640 | 0.826476 | 2.657082e-54 | -8.615850e-47 |
| Msa0934840 | Msa1028190 | 0.818403 | 1.996591e-52 | -8.615850e-47 |
| Msa0934840 | Msa1043050 | 0.814995 | 1.159856e-51 | -8.615850e-47 |
| Msa0934840 | Msa1054510 | 0.818827 | 1.599750e-52 | -8.615850e-47 |
| Msa0934840 | Msa1066810 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0934840 | Msa1077070 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0934840 | Msa1094280 | 0.806428 | 8.267089e-50 | -8.615850e-47 |
| Msa0934840 | Msa1123350 | 0.810498 | 1.118590e-50 | -8.615850e-47 |
| Msa0934840 | Msa1127430 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
| Msa0934840 | Msa1150710 | 0.819063 | 1.414059e-52 | -8.615850e-47 |
| Msa0934840 | Msa1200320 | 0.800007 | 1.763632e-48 | -8.615850e-47 |
| Msa0934840 | Msa1201640 | 0.806057 | 9.893097e-50 | -8.615850e-47 |
| Msa0934840 | Msa1205480 | 0.815710 | 8.041344e-52 | -8.615850e-47 |
| Msa0934840 | Msa1205590 | 0.846685 | 1.859549e-59 | -8.615850e-47 |
| Msa0934840 | Msa1206100 | 0.817633 | 2.980013e-52 | -8.615850e-47 |
| Msa0934840 | Msa1206270 | 0.821532 | 3.839812e-53 | -8.615850e-47 |
| Msa0934840 | Msa1206290 | 0.816043 | 6.778502e-52 | -8.615850e-47 |
| Msa0934840 | Msa1208380 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0934840 | Msa1208790 | 0.815873 | 7.395849e-52 | -8.615850e-47 |
| Msa0934840 | Msa1209190 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
| Msa0934840 | Msa1209860 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
| Msa0934840 | Msa1233850 | 0.814071 | 1.856406e-51 | -8.615850e-47 |
| Msa0934840 | Msa1234620 | 0.824810 | 6.598454e-54 | -8.615850e-47 |
| Msa0934840 | Msa1250530 | 0.809032 | 2.311657e-50 | -8.615850e-47 |
| Msa0934840 | Msa1254620 | 0.801838 | 7.452921e-49 | -8.615850e-47 |
| Msa0934840 | Msa1258980 | 0.804651 | 1.949899e-49 | -8.615850e-47 |
| Msa0934840 | Msa1297530 | 0.838730 | 2.416922e-57 | -8.615850e-47 |
| Msa0934840 | Msa1304810 | 0.819556 | 1.091408e-52 | -8.615850e-47 |
| Msa0934840 | Msa1329550 | 0.821001 | 5.091914e-53 | -8.615850e-47 |
| Msa0934840 | Msa1330630 | 0.803080 | 4.135318e-49 | -8.615850e-47 |
| Msa0934840 | Msa1348850 | 0.825510 | 4.506256e-54 | -8.615850e-47 |
| Msa0934840 | Msa1370590 | 0.810065 | 1.387150e-50 | -8.615850e-47 |
| Msa0934840 | Msa1382020 | 0.817387 | 3.386024e-52 | -8.615850e-47 |
| Msa0934840 | Msa1384100 | 0.808209 | 3.466215e-50 | -8.615850e-47 |
| Msa0934840 | Msa1426910 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa0934840 | Msa1434040 | 0.835322 | 1.794917e-56 | -8.615850e-47 |
| Msa0934840 | Msa1438840 | 0.822032 | 2.941898e-53 | -8.615850e-47 |
| Msa0934840 | Msa1440190 | 0.991531 | 3.791246e-188 | -8.615850e-47 |
| Msa0934840 | Msa1444120 | 0.807683 | 4.483199e-50 | -8.615850e-47 |
| Msa0934840 | Msa1447890 | 0.827398 | 1.599626e-54 | -8.615850e-47 |
| Msa0934840 | Msa1448630 | 0.826645 | 2.421913e-54 | -8.615850e-47 |
| Msa0934840 | Msa1449750 | 0.993242 | 2.135981e-198 | -8.615850e-47 |
| Msa0934840 | Msa1458090 | 0.815762 | 7.831037e-52 | -8.615850e-47 |
| Msa0934840 | Msa1460320 | -0.802047 | 6.751018e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934840 | MtrunA17_Chr6g0450811 | 92.593 | 378 | 3 | 2 | 1 | 353 | 1 | 378 | 0.0 | 704 |
| Msa0934840 | MtrunA17_Chr6g0450811 | 85.873 | 361 | 26 | 2 | 350 | 685 | 26 | 386 | 0.0 | 634 |
| Msa0934840 | MtrunA17_Chr6g0450821 | 86.158 | 354 | 5 | 3 | 357 | 685 | 3 | 337 | 0.0 | 592 |
| Msa0934840 | MtrunA17_Chr6g0450821 | 79.310 | 348 | 28 | 3 | 31 | 353 | 1 | 329 | 0.0 | 539 |
| Msa0934840 | MtrunA17_Chr3g0077771 | 28.235 | 255 | 148 | 5 | 116 | 335 | 112 | 366 | 6.35e-18 | 86.3 |
| Msa0934840 | MtrunA17_Chr4g0000511 | 27.642 | 246 | 149 | 7 | 122 | 342 | 152 | 393 | 1.11e-16 | 84.0 |
| Msa0934840 | MtrunA17_Chr4g0000511 | 26.531 | 245 | 153 | 5 | 446 | 666 | 152 | 393 | 1.85e-16 | 83.2 |
| Msa0934840 | MtrunA17_Chr1g0208141 | 29.268 | 246 | 145 | 7 | 122 | 342 | 119 | 360 | 1.00e-15 | 80.9 |
| Msa0934840 | MtrunA17_Chr1g0208141 | 28.163 | 245 | 149 | 6 | 446 | 666 | 119 | 360 | 2.37e-15 | 79.7 |
| Msa0934840 | MtrunA17_Chr8g0351111 | 26.482 | 253 | 158 | 6 | 111 | 339 | 65 | 313 | 1.89e-15 | 78.2 |
| Msa0934840 | MtrunA17_Chr8g0351111 | 27.381 | 252 | 157 | 6 | 435 | 663 | 65 | 313 | 1.24e-14 | 75.5 |
| Msa0934840 | MtrunA17_Chr4g0004711 | 26.255 | 259 | 151 | 9 | 113 | 342 | 59 | 306 | 1.63e-13 | 72.0 |
| Msa0934840 | MtrunA17_Chr4g0004711 | 25.296 | 253 | 159 | 8 | 438 | 666 | 60 | 306 | 1.93e-13 | 72.0 |
| Msa0934840 | MtrunA17_Chr4g0004721 | 24.911 | 281 | 169 | 9 | 91 | 342 | 40 | 307 | 3.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0934840 | AT5G14780.2 | 76.423 | 369 | 60 | 3 | 342 | 685 | 4 | 370 | 0.0 | 539 |
| Msa0934840 | AT5G14780.2 | 77.746 | 346 | 52 | 2 | 33 | 353 | 17 | 362 | 0.0 | 521 |
| Msa0934840 | AT5G14780.1 | 77.716 | 359 | 55 | 2 | 352 | 685 | 26 | 384 | 0.0 | 538 |
| Msa0934840 | AT5G14780.1 | 74.142 | 379 | 69 | 4 | 1 | 353 | 1 | 376 | 0.0 | 525 |
| Msa0934840 | AT5G14780.3 | 78.592 | 355 | 51 | 2 | 356 | 685 | 4 | 358 | 0.0 | 538 |
| Msa0934840 | AT5G14780.3 | 77.746 | 346 | 52 | 2 | 33 | 353 | 5 | 350 | 0.0 | 521 |
| Msa0934840 | AT1G72190.1 | 30.213 | 235 | 132 | 5 | 116 | 320 | 110 | 342 | 1.35e-18 | 88.6 |
| Msa0934840 | AT1G72190.1 | 27.208 | 283 | 167 | 8 | 392 | 644 | 69 | 342 | 3.69e-18 | 87.4 |
| Msa0934840 | AT1G17745.1 | 27.599 | 279 | 170 | 9 | 90 | 342 | 115 | 387 | 2.74e-17 | 86.3 |
| Msa0934840 | AT1G17745.1 | 27.626 | 257 | 158 | 7 | 435 | 666 | 134 | 387 | 4.02e-17 | 85.9 |
| Msa0934840 | AT4G34200.1 | 28.455 | 246 | 147 | 7 | 122 | 342 | 125 | 366 | 1.68e-15 | 80.5 |
| Msa0934840 | AT4G34200.1 | 27.347 | 245 | 151 | 6 | 446 | 666 | 125 | 366 | 4.11e-15 | 79.3 |
| Msa0934840 | AT1G17745.2 | 25.902 | 305 | 169 | 10 | 90 | 342 | 115 | 414 | 4.12e-15 | 79.7 |
| Msa0934840 | AT1G17745.2 | 25.442 | 283 | 158 | 8 | 435 | 666 | 134 | 414 | 1.96e-14 | 77.4 |
| Msa0934840 | AT3G19480.1 | 26.531 | 245 | 155 | 4 | 445 | 666 | 109 | 351 | 1.11e-14 | 78.2 |
| Msa0934840 | AT3G19480.1 | 27.935 | 247 | 149 | 7 | 121 | 342 | 109 | 351 | 1.21e-14 | 77.8 |
| Msa0934840 | AT1G12550.1 | 26.957 | 230 | 147 | 7 | 435 | 644 | 64 | 292 | 3.61e-12 | 68.6 |
| Msa0934840 | AT1G12550.1 | 25.287 | 261 | 170 | 7 | 81 | 320 | 36 | 292 | 1.60e-11 | 66.6 |
| Msa0934840 | AT1G79870.1 | 26.378 | 254 | 161 | 8 | 113 | 344 | 59 | 308 | 4.06e-12 | 68.2 |
| Msa0934840 | AT1G79870.1 | 26.295 | 251 | 159 | 8 | 440 | 668 | 62 | 308 | 8.04e-12 | 67.4 |
Find 178 sgRNAs with CRISPR-Local
Find 484 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACACATCCAACAAAAT+TGG | 0.150781 | 6_3:+4924628 | None:intergenic |
| TTCAACACATCCAACAAAAT+TGG | 0.168585 | 6_3:+4920095 | None:intergenic |
| TATGCTTGAGAGGCACTTTA+AGG | 0.176399 | 6_3:-4918218 | Msa0934840:CDS |
| TATGCTTGAGAGGCACTTTA+AGG | 0.176399 | 6_3:-4922682 | Msa0934840:CDS |
| AATATATGTAAAATTCTTAT+TGG | 0.179143 | 6_3:+4926814 | None:intergenic |
| ATATAAAAGGTTACAGTTAA+AGG | 0.184451 | 6_3:+4919513 | None:intergenic |
| CCAATTTCTTTCTCCAATTC+AGG | 0.191495 | 6_3:+4919469 | None:intergenic |
| CCAATTTCTTTCTCCAATTC+AGG | 0.196911 | 6_3:+4923907 | None:intergenic |
| CAATGCTCGTGGGGCGATTA+TGG | 0.210159 | 6_3:-4919181 | Msa0934840:CDS |
| ATATAAAAGGTTACAGTTAA+AGG | 0.223160 | 6_3:+4923951 | None:intergenic |
| GCTATGACTCCTCATATTTC+TGG | 0.232371 | 6_3:-4923325 | Msa0934840:CDS |
| GCGATGACTCCTCATATTTC+TGG | 0.233071 | 6_3:-4918882 | Msa0934840:CDS |
| CAATGCTCGTGGAGCACTTA+TGG | 0.246792 | 6_3:-4923555 | Msa0934840:CDS |
| CTCAATGCTGCGGCTGCTGC+TGG | 0.282556 | 6_3:-4924201 | Msa0934840:CDS |
| CTCAACGCTGCGGCTGCTGC+TGG | 0.289747 | 6_3:-4919763 | Msa0934840:CDS |
| TAGCGCCATGGATGATCTTT+TGG | 0.296464 | 6_3:+4918918 | None:intergenic |
| TAGCGCCATGGATGATCTTT+TGG | 0.296464 | 6_3:+4923361 | None:intergenic |
| CCTGAATTGGAGAAAGAAAT+TGG | 0.310313 | 6_3:-4919469 | Msa0934840:CDS |
| AGTTAAAGGGTTTCAGCCTT+TGG | 0.316924 | 6_3:+4919527 | None:intergenic |
| AGTTAAAGGGTTTCAGCCTT+TGG | 0.316924 | 6_3:+4923965 | None:intergenic |
| CCTGAATTGGAGAAAGAAAT+TGG | 0.319944 | 6_3:-4923907 | Msa0934840:CDS |
| TATAAAAGGTTACAGTTAAA+GGG | 0.334347 | 6_3:+4919514 | None:intergenic |
| TTCACAATGTAATGCTGTTC+AGG | 0.337030 | 6_3:+4918184 | None:intergenic |
| GGTGAAATGGTGTGGATATC+AGG | 0.337349 | 6_3:+4924310 | None:intergenic |
| TCAACACATCCAACAAAATT+GGG | 0.339618 | 6_3:+4920096 | None:intergenic |
| TTCACAATGTAGTTCTGTTC+AGG | 0.343342 | 6_3:+4922648 | None:intergenic |
| CGCTTTCTTAATTCTTTCCT+CGG | 0.344856 | 6_3:+4919837 | None:intergenic |
| ACTTAAGATGGCGCCTGAAT+TGG | 0.345074 | 6_3:-4923920 | Msa0934840:CDS |
| TAAGTCTATCATGATATAAA+AGG | 0.348710 | 6_3:+4919500 | None:intergenic |
| TAAGTCTATCGTGATATAAA+AGG | 0.348710 | 6_3:+4923938 | None:intergenic |
| ACGGTCGGTGCTGGACGAAT+TGG | 0.352979 | 6_3:-4924000 | Msa0934840:CDS |
| ATATATGTAAAATTCTTATT+GGG | 0.353999 | 6_3:+4926815 | None:intergenic |
| GGTTACAAGCAGGCTGTTGC+CGG | 0.355403 | 6_3:-4919646 | Msa0934840:intron |
| GACAAAGAAGGACTCAATTC+TGG | 0.356342 | 6_3:-4924545 | Msa0934840:intron |
| TATAAAAGGTTACAGTTAAA+GGG | 0.356684 | 6_3:+4923952 | None:intergenic |
| TGTTCTAGTGGACACGTTGC+AGG | 0.363087 | 6_3:-4923509 | Msa0934840:intron |
| GACAAAGAAGGACCTGATTC+TGG | 0.363375 | 6_3:-4920012 | Msa0934840:intron |
| TAGGTTACAGTGGTGATGTT+TGG | 0.375068 | 6_3:-4918956 | Msa0934840:CDS |
| TAGGTTACAGTGGTGATGTT+TGG | 0.375068 | 6_3:-4923399 | Msa0934840:CDS |
| ATCGGTATTGGCTTGCCAAT+TGG | 0.378591 | 6_3:+4918155 | None:intergenic |
| AGCAAGAAAGGGAGAGGAGT+TGG | 0.382551 | 6_3:-4926771 | Msa0934840:five_prime_UTR |
| GATACTACATTCATCGGTAT+TGG | 0.383983 | 6_3:+4918143 | None:intergenic |
| CTTTCCTCGGTGACATAGGC+AGG | 0.386770 | 6_3:+4919850 | None:intergenic |
| TCAAAATTCTAACCAGAATC+AGG | 0.393287 | 6_3:+4920000 | None:intergenic |
| TCAACACATCCAACAAAATT+GGG | 0.405718 | 6_3:+4924629 | None:intergenic |
| CGTCTTTCCTTCAAGATCAT+AGG | 0.406591 | 6_3:+4919591 | None:intergenic |
| ACTTAAGATGGAGCCTGAAT+TGG | 0.406632 | 6_3:-4919482 | Msa0934840:CDS |
| CATTGTGAAGCAGGGCCAAT+TGG | 0.415484 | 6_3:-4918170 | Msa0934840:CDS |
| GGTGAAATGGTGTAGATATC+AGG | 0.417800 | 6_3:+4919872 | None:intergenic |
| TGTCTTTCCTTCAAGATCAT+AGG | 0.421953 | 6_3:+4924029 | None:intergenic |
| ACCGGAGAATGGAATGTTGC+TGG | 0.422186 | 6_3:-4924066 | Msa0934840:CDS |
| TCCAACAAAATTGGGATTCA+AGG | 0.426930 | 6_3:+4924637 | None:intergenic |
| CGGTCGGTGCTGGACGAATT+GGG | 0.430059 | 6_3:-4923999 | Msa0934840:CDS |
| ATATCATGATAGACTTAAGA+TGG | 0.430838 | 6_3:-4919494 | Msa0934840:CDS |
| ATAAACTACCTGTGCATCAA+TGG | 0.432079 | 6_3:+4923297 | None:intergenic |
| GGTTACCATCAGGCTATTAC+CGG | 0.432378 | 6_3:-4924084 | Msa0934840:intron |
| ACAGTTGGTGCTGGACGAAT+CGG | 0.436838 | 6_3:-4919562 | Msa0934840:CDS |
| TATTATTGAGAATAGGCATC+TGG | 0.440836 | 6_3:-4920177 | Msa0934840:intron |
| CACCTTCTTCCATCATCACC+AGG | 0.440843 | 6_3:-4926492 | Msa0934840:CDS |
| AGCAGGCTGTTGCCGGAGAA+TGG | 0.441500 | 6_3:-4919639 | Msa0934840:intron |
| CTGCTTCTAACCGCCGGCAT+TGG | 0.441881 | 6_3:-4924240 | Msa0934840:CDS |
| CATAGAGCCTATGATCTTGA+AGG | 0.442532 | 6_3:-4919598 | Msa0934840:CDS |
| CATAGAGCCTATGATCTTGA+AGG | 0.442532 | 6_3:-4924036 | Msa0934840:CDS |
| TGAGGAGTCATCGCATGGTT+TGG | 0.445585 | 6_3:+4918891 | None:intergenic |
| GGAGAGGAGTTGGAAGGAAA+GGG | 0.449862 | 6_3:-4926761 | Msa0934840:five_prime_UTR |
| GGATGTGTTGAAGGAGCATT+AGG | 0.450524 | 6_3:-4920084 | Msa0934840:CDS |
| GGATGTGTTGAAGGAGCATT+AGG | 0.450524 | 6_3:-4924617 | Msa0934840:CDS |
| TGTACTAGTGGACACATTGC+AGG | 0.452738 | 6_3:-4919135 | Msa0934840:intron |
| GGGAGAGGAGTTGGAAGGAA+AGG | 0.454236 | 6_3:-4926762 | Msa0934840:five_prime_UTR |
| ATGCTTGAGAGGCACTTTAA+GGG | 0.454740 | 6_3:-4918217 | Msa0934840:CDS |
| ATGCTTGAGAGGCACTTTAA+GGG | 0.454740 | 6_3:-4922681 | Msa0934840:CDS |
| ATAAACAACCTGTGCATCAA+TGG | 0.455572 | 6_3:+4918854 | None:intergenic |
| GGAGGAAAGAAGAAAATTGT+AGG | 0.456151 | 6_3:-4920156 | Msa0934840:CDS |
| TGAGGAGTCATAGCATGATT+AGG | 0.459588 | 6_3:+4923334 | None:intergenic |
| TTTATGTCATTAAGTTGAAT+CGG | 0.462170 | 6_3:+4926870 | None:intergenic |
| GGTGGAAAGAAGAAGATTGT+AGG | 0.462288 | 6_3:-4924689 | Msa0934840:CDS |
| CTTTCCGCAGTGACATAGGC+AGG | 0.464618 | 6_3:+4924288 | None:intergenic |
| TGTTGTTGAGAATAGGCCTC+TGG | 0.466148 | 6_3:-4924710 | Msa0934840:intron |
| CTTTGAAGAAGCAGTGATCA+AGG | 0.467599 | 6_3:+4926531 | None:intergenic |
| ACAGTTGGAACGGTCGGTGC+TGG | 0.468606 | 6_3:-4924009 | Msa0934840:CDS |
| ATATCACGATAGACTTAAGA+TGG | 0.470085 | 6_3:-4923932 | Msa0934840:CDS |
| GTGACATAGGCAGGGTGAAA+TGG | 0.470645 | 6_3:+4919859 | None:intergenic |
| GTGACATAGGCAGGGTGAAA+TGG | 0.470645 | 6_3:+4924297 | None:intergenic |
| GCCGGAGAATGGAATGTTGC+TGG | 0.480317 | 6_3:-4919628 | Msa0934840:CDS |
| GTTCAGTTACGTTATGCTGC+TGG | 0.487635 | 6_3:-4918250 | Msa0934840:intron |
| ACAGCATTACATTGTGAAGC+AGG | 0.492555 | 6_3:-4918179 | Msa0934840:CDS |
| GATATCAGGACATGCAGATC+GGG | 0.492666 | 6_3:+4919886 | None:intergenic |
| ATGAAGGTCCCTGGTGATGA+TGG | 0.493616 | 6_3:+4926483 | None:intergenic |
| ATCAGGCTATTACCGGAGAA+TGG | 0.493947 | 6_3:-4924077 | Msa0934840:intron |
| GCCAGCAACATTCCATTCTC+CGG | 0.495643 | 6_3:+4924065 | None:intergenic |
| TGGAACTACCATTGATGCAC+AGG | 0.501814 | 6_3:-4918862 | Msa0934840:intron |
| ACCAGCAACATTCCATTCTC+CGG | 0.501972 | 6_3:+4919627 | None:intergenic |
| ATTGCTGATGCTTGTTCTAG+TGG | 0.505145 | 6_3:-4923521 | Msa0934840:CDS |
| AATTCTTTCCTCGGTGACAT+AGG | 0.513371 | 6_3:+4919846 | None:intergenic |
| AGAATTGCTAAGTTGAAGAA+AGG | 0.514648 | 6_3:-4923593 | Msa0934840:CDS |
| AGAAATTGGAGCTCAGTTTG+AGG | 0.516756 | 6_3:-4923893 | Msa0934840:CDS |
| AATTCTTTCCGCAGTGACAT+AGG | 0.516858 | 6_3:+4924284 | None:intergenic |
| GGAAAGACGGTTGGAACAGT+TGG | 0.521323 | 6_3:-4919577 | Msa0934840:CDS |
| TTGATTGTTAACAATGCTCG+TGG | 0.521418 | 6_3:-4919192 | Msa0934840:CDS |
| GATATCAGGACATTGAGATC+AGG | 0.531388 | 6_3:+4924324 | None:intergenic |
| CAGTTGGTGCTGGACGAATC+GGG | 0.533028 | 6_3:-4919561 | Msa0934840:CDS |
| GTTCAGTTACGTTATGCTGC+TGG | 0.533638 | 6_3:-4922714 | Msa0934840:intron |
| TGGAACCACCATTGATGCAC+AGG | 0.536965 | 6_3:-4923305 | Msa0934840:intron |
| AGAAATTGGAGCTCAGTTTG+AGG | 0.537059 | 6_3:-4919455 | Msa0934840:CDS |
| TTAGAGCTGCTTCTAACCGC+CGG | 0.540077 | 6_3:-4924246 | Msa0934840:CDS |
| CACAGGAAGCAACGTAGTAT+CGG | 0.541220 | 6_3:-4919722 | Msa0934840:CDS |
| TGAGAGGCACTTTAAGGGTG+AGG | 0.541517 | 6_3:-4918212 | Msa0934840:CDS |
| TGATTGTTAACAATGCTCGT+GGG | 0.541593 | 6_3:-4919191 | Msa0934840:CDS |
| AGAATCGCTAAGTTGAAGAA+AGG | 0.545413 | 6_3:-4919219 | Msa0934840:CDS |
| TAACTTAACCTGAGTGAGGA+AGG | 0.546381 | 6_3:+4926733 | None:intergenic |
| TTAACTGTCGCAGAGGTCAC+AGG | 0.552581 | 6_3:-4924177 | Msa0934840:CDS |
| ACGGTTGGAACAGTTGGTGC+TGG | 0.553144 | 6_3:-4919571 | Msa0934840:CDS |
| GATCTTGAAGGAAAGACGGT+TGG | 0.556559 | 6_3:-4919586 | Msa0934840:CDS |
| GATCTTGAAGGAAAGACAGT+TGG | 0.556559 | 6_3:-4924024 | Msa0934840:CDS |
| AGAAAGGGAGAGGAGTTGGA+AGG | 0.559805 | 6_3:-4926767 | Msa0934840:five_prime_UTR |
| AATGTGATCAGAACCAATGC+CGG | 0.563596 | 6_3:+4924227 | None:intergenic |
| TTAACCGTCGCAGAGGTCAC+AGG | 0.565278 | 6_3:-4919739 | Msa0934840:CDS |
| ACATCCAACAAAATTGGGGT+TGG | 0.565621 | 6_3:+4920101 | None:intergenic |
| GTTGCTGATGCTTGTACTAG+TGG | 0.565800 | 6_3:-4919147 | Msa0934840:CDS |
| ATTAGGTATACGCGAGTGGT+TGG | 0.567034 | 6_3:-4924600 | Msa0934840:CDS |
| ACTTTGGTAGCATTGTATCA+AGG | 0.567924 | 6_3:+4919428 | None:intergenic |
| CAGCTCCAAAAGATCATCCA+TGG | 0.568481 | 6_3:-4918923 | Msa0934840:CDS |
| CAGCTCCAAAAGATCATCCA+TGG | 0.568481 | 6_3:-4923366 | Msa0934840:CDS |
| TGAGCTTACATGAAGGTCCC+TGG | 0.575307 | 6_3:+4926474 | None:intergenic |
| AGATATCAGGACATGCAGAT+CGG | 0.580334 | 6_3:+4919885 | None:intergenic |
| ATTGTCACTGATGACAAAGA+AGG | 0.582437 | 6_3:-4924557 | Msa0934840:CDS |
| GGAAAGACAGTTGGAACGGT+CGG | 0.583686 | 6_3:-4924015 | Msa0934840:CDS |
| GGGTAAAGCCTTCCTCACTC+AGG | 0.595514 | 6_3:-4926741 | Msa0934840:intron |
| TTTCATCTTATAGGTTACAG+TGG | 0.595880 | 6_3:-4918966 | Msa0934840:intron |
| ATTGTAGGTGTGTTCTACAA+AGG | 0.596743 | 6_3:-4920141 | Msa0934840:CDS |
| AATCTTCTTCTTTCCACCAG+AGG | 0.597365 | 6_3:+4924694 | None:intergenic |
| ATTGTCACAGATGACAAAGA+AGG | 0.604616 | 6_3:-4920024 | Msa0934840:CDS |
| CAACGTAGTATCGGTTGCTG+AGG | 0.609487 | 6_3:-4919713 | Msa0934840:CDS |
| ACAGAACTACATTGTGAAGG+AGG | 0.610756 | 6_3:-4922643 | Msa0934840:CDS |
| GCTTCCTGTGACCTCTGCGA+CGG | 0.611055 | 6_3:+4919735 | None:intergenic |
| AGCGTTGAGATCAATGTGAT+CGG | 0.612699 | 6_3:+4919777 | None:intergenic |
| TGATTAGGCATGTAGCGCCA+TGG | 0.614868 | 6_3:+4923349 | None:intergenic |
| CTATGATCTTGAAGGAAAGA+CGG | 0.616356 | 6_3:-4919590 | Msa0934840:CDS |
| CAACACTGTGTCGGTTGCTG+AGG | 0.618658 | 6_3:-4924151 | Msa0934840:CDS |
| CGCGAGTGGTTGGAATCACA+AGG | 0.620030 | 6_3:-4924590 | Msa0934840:CDS |
| CAACACATCCAACAAAATTG+GGG | 0.620958 | 6_3:+4920097 | None:intergenic |
| ATGGTAGTTCCAGAAATATG+AGG | 0.623567 | 6_3:+4918873 | None:intergenic |
| GAGTCAAAGATATGCTTGAG+AGG | 0.624367 | 6_3:-4918228 | Msa0934840:CDS |
| GAGTCAAAGATATGCTTGAG+AGG | 0.624367 | 6_3:-4922692 | Msa0934840:CDS |
| CAGCATTACATTGTGAAGCA+GGG | 0.632429 | 6_3:-4918178 | Msa0934840:CDS |
| AACTACCTGTGCATCAATGG+TGG | 0.632641 | 6_3:+4923300 | None:intergenic |
| TATTGAGAATAGGCATCTGG+AGG | 0.633472 | 6_3:-4920174 | Msa0934840:intron |
| TGGTTTGGCATGTAGCGCCA+TGG | 0.634567 | 6_3:+4918906 | None:intergenic |
| ATTGTAGGTGTGTTCTACAA+AGG | 0.635031 | 6_3:-4924674 | Msa0934840:CDS |
| GATTGTTAACAATGCTCGTG+GGG | 0.635440 | 6_3:-4919190 | Msa0934840:CDS |
| CGCGAGTGGCTTGAATCACA+AGG | 0.636363 | 6_3:-4920057 | Msa0934840:CDS |
| CACAGGAAGCAACACTGTGT+CGG | 0.636460 | 6_3:-4924160 | Msa0934840:CDS |
| TTTCCTCGGTGACATAGGCA+GGG | 0.636732 | 6_3:+4919851 | None:intergenic |
| TTTCCGCAGTGACATAGGCA+GGG | 0.641235 | 6_3:+4924289 | None:intergenic |
| TTGATTGTCAACAATGCTCG+TGG | 0.642232 | 6_3:-4923566 | Msa0934840:CDS |
| AATTGGAGCTCAGTTTGAGG+AGG | 0.645215 | 6_3:-4923890 | Msa0934840:CDS |
| TGTTGAGAATAGGCCTCTGG+TGG | 0.646139 | 6_3:-4924707 | Msa0934840:intron |
| AAATATGAGGAGTCATCGCA+TGG | 0.646699 | 6_3:+4918886 | None:intergenic |
| CAGAACTACATTGTGAAGGA+GGG | 0.646841 | 6_3:-4922642 | Msa0934840:intron |
| TCCCTGGTGATGATGGAAGA+AGG | 0.649337 | 6_3:+4926490 | None:intergenic |
| TGAACAGAACTACATTGTGA+AGG | 0.650943 | 6_3:-4922646 | Msa0934840:CDS |
| TGAAGGAAAGACAGTTGGAA+CGG | 0.651639 | 6_3:-4924019 | Msa0934840:CDS |
| ACCTTCTTCCATCATCACCA+GGG | 0.652169 | 6_3:-4926491 | Msa0934840:CDS |
| GAGCATTAGGTATACGCGAG+TGG | 0.657382 | 6_3:-4920071 | Msa0934840:CDS |
| TGCTGGTTTAACCGTCGCAG+AGG | 0.660243 | 6_3:-4919746 | Msa0934840:CDS |
| TGCTTAACTTAACCTGAGTG+AGG | 0.662618 | 6_3:+4926729 | None:intergenic |
| ATAGGCAGGGTGAAATGGTG+TGG | 0.663821 | 6_3:+4924302 | None:intergenic |
| GAGCATTAGGTATACGCGAG+TGG | 0.665851 | 6_3:-4924604 | Msa0934840:CDS |
| TCACATTGATCTCAATGCTG+CGG | 0.666935 | 6_3:-4924211 | Msa0934840:CDS |
| TGCTGGTTTAACTGTCGCAG+AGG | 0.668788 | 6_3:-4924184 | Msa0934840:CDS |
| GTTTCATCTATAGGTTACAG+TGG | 0.672760 | 6_3:-4923409 | Msa0934840:intron |
| GTAGGTGTGTTCTACAAAGG+CGG | 0.684274 | 6_3:-4924671 | Msa0934840:CDS |
| ATGGTGGTTCCAGAAATATG+AGG | 0.685776 | 6_3:+4923316 | None:intergenic |
| GTGATCAGAACCAATGCCGG+CGG | 0.702688 | 6_3:+4924230 | None:intergenic |
| GTTGAATCGGCTATGTGATG+AGG | 0.710161 | 6_3:+4926883 | None:intergenic |
| TCACCCTGCCTATGTCACTG+CGG | 0.753926 | 6_3:-4924292 | Msa0934840:CDS |
| TCACATTGATCTCAACGCTG+CGG | 0.771896 | 6_3:-4919773 | Msa0934840:CDS |
| TCACCCTGCCTATGTCACCG+AGG | 0.774835 | 6_3:-4919854 | Msa0934840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATGTAAAATTCTTATT+GGG | + | chr6_3:4918287-4918306 | None:intergenic | 10.0% |
| !! | AATATATGTAAAATTCTTAT+TGG | + | chr6_3:4918288-4918307 | None:intergenic | 10.0% |
| !!! | AGTATAATCATTATATTTTT+TGG | - | chr6_3:4919590-4919609 | Msa0934840:CDS | 10.0% |
| !!! | GTATAATCATTATATTTTTT+GGG | - | chr6_3:4919591-4919610 | Msa0934840:CDS | 10.0% |
| !! | TTTCAAAAAAAAAAAAAGTA+GGG | + | chr6_3:4919762-4919781 | None:intergenic | 10.0% |
| !! | GAATAATTTACTATAATAAA+TGG | + | chr6_3:4920040-4920059 | None:intergenic | 10.0% |
| !! | TCAATATTAATATTTCATAT+TGG | + | chr6_3:4923439-4923458 | None:intergenic | 10.0% |
| !! | TTTAGTTAAAAATATGAAAA+TGG | + | chr6_3:4923756-4923775 | None:intergenic | 10.0% |
| !! | AAAAATTAAAAAACACAAAA+AGG | + | chr6_3:4924414-4924433 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAATCTAAAGTAT+TGG | - | chr6_3:4926519-4926538 | Msa0934840:CDS | 10.0% |
| !!! | TTTTTAAAATCTAAAGTATT+GGG | - | chr6_3:4926520-4926539 | Msa0934840:CDS | 10.0% |
| !! | TTAAATTAAAAAAGCAAGAA+AGG | - | chr6_3:4918316-4918335 | Msa0934840:intron | 15.0% |
| !! | TAAATTAAAAAAGCAAGAAA+GGG | - | chr6_3:4918317-4918336 | Msa0934840:intron | 15.0% |
| !! | AAACAAAAATTGTTTGAAAA+TGG | - | chr6_3:4918524-4918543 | Msa0934840:intron | 15.0% |
| !! | TTATTCCACAAAATTTAAAA+GGG | + | chr6_3:4919516-4919535 | None:intergenic | 15.0% |
| !! | TTTATTCCACAAAATTTAAA+AGG | + | chr6_3:4919517-4919536 | None:intergenic | 15.0% |
| !!! | TAAATTTTGTGGAATAAAAT+TGG | - | chr6_3:4919519-4919538 | Msa0934840:CDS | 15.0% |
| !! | TGCATACATTTATTTAATAA+TGG | + | chr6_3:4919560-4919579 | None:intergenic | 15.0% |
| !! | ATAATGATTATACTAATGTA+GGG | + | chr6_3:4919584-4919603 | None:intergenic | 15.0% |
| !! | TATAATGATTATACTAATGT+AGG | + | chr6_3:4919585-4919604 | None:intergenic | 15.0% |
| !!! | TGGAATATGTTTAATTTTTT+GGG | - | chr6_3:4919660-4919679 | Msa0934840:intron | 15.0% |
| !!! | TTTAATTTTTTGGGTAAAAT+GGG | - | chr6_3:4919669-4919688 | Msa0934840:intron | 15.0% |
| !! | CTTTCAAAAAAAAAAAAAGT+AGG | + | chr6_3:4919763-4919782 | None:intergenic | 15.0% |
| !!! | TTCATATCTAATTTTTTGTT+GGG | - | chr6_3:4919968-4919987 | Msa0934840:intron | 15.0% |
| !!! | TAAATTTTGTTAGTCATTTT+AGG | + | chr6_3:4920225-4920244 | None:intergenic | 15.0% |
| !!! | TACGATTTTAAACATTTTTT+CGG | - | chr6_3:4920645-4920664 | Msa0934840:intron | 15.0% |
| !! | GATTGAAACTAAAATAAATA+CGG | - | chr6_3:4922196-4922215 | Msa0934840:intron | 15.0% |
| !!! | ATCTTTATTTAGTAATTCAT+TGG | + | chr6_3:4922557-4922576 | None:intergenic | 15.0% |
| !!! | GATAAATATTTTCAATTGAA+AGG | + | chr6_3:4922729-4922748 | None:intergenic | 15.0% |
| !! | TCAATTGAAAATATTTATCA+TGG | - | chr6_3:4922730-4922749 | Msa0934840:intron | 15.0% |
| !!! | TTATAAATGGTCTTATAATT+AGG | + | chr6_3:4923318-4923337 | None:intergenic | 15.0% |
| !!! | AGAGAAACAATTTTTATAAA+TGG | + | chr6_3:4923331-4923350 | None:intergenic | 15.0% |
| !!! | ATTTTGTTGTTTCTTTTTAT+GGG | - | chr6_3:4923888-4923907 | Msa0934840:CDS | 15.0% |
| !!! | TGTAATTTTGATACATTTAA+CGG | - | chr6_3:4920251-4920270 | Msa0934840:intron | 15.0% |
| !! | TTCTCAATAATAACAAAAAA+TGG | + | chr6_3:4924914-4924933 | None:intergenic | 15.0% |
| !!! | TTTTTGTTATTATTGAGAAT+AGG | - | chr6_3:4924915-4924934 | Msa0934840:intron | 15.0% |
| !!! | TTTAAGATAAAGTTTTAAGA+GGG | + | chr6_3:4925137-4925156 | None:intergenic | 15.0% |
| !!! | TTTTAAGATAAAGTTTTAAG+AGG | + | chr6_3:4925138-4925157 | None:intergenic | 15.0% |
| !!! | AACTTTATCTTAAAAGTTTT+TGG | - | chr6_3:4925143-4925162 | Msa0934840:intron | 15.0% |
| !! | TACTATTATTGATCTATTAA+CGG | - | chr6_3:4925748-4925767 | Msa0934840:intron | 15.0% |
| !!! | TTTATGTCATTAAGTTGAAT+CGG | + | chr6_3:4918232-4918251 | None:intergenic | 20.0% |
| !! | CTTAATTTCATTCAATCATT+TGG | - | chr6_3:4918662-4918681 | Msa0934840:intron | 20.0% |
| !!! | CTTTTAAAAATGAGTCTTAA+CGG | - | chr6_3:4919010-4919029 | Msa0934840:intron | 20.0% |
| !! | AATAATGCATAATATATGCA+AGG | + | chr6_3:4919091-4919110 | None:intergenic | 20.0% |
| !! | TTAGACCTTATGTTTAATTA+AGG | - | chr6_3:4919178-4919197 | Msa0934840:CDS | 20.0% |
| !! | TAGACCTTATGTTTAATTAA+GGG | - | chr6_3:4919179-4919198 | Msa0934840:CDS | 20.0% |
| !! | TATTCCACAAAATTTAAAAG+GGG | + | chr6_3:4919515-4919534 | None:intergenic | 20.0% |
| !! | ATATTCCACAAAATTAGAAA+GGG | + | chr6_3:4919648-4919667 | None:intergenic | 20.0% |
| !!! | GTGGAATATGTTTAATTTTT+TGG | - | chr6_3:4919659-4919678 | Msa0934840:intron | 20.0% |
| !!! | GTTTAATTTTTTGGGTAAAA+TGG | - | chr6_3:4919668-4919687 | Msa0934840:intron | 20.0% |
| !!! | TACATGATATTTAACTTCAT+TGG | + | chr6_3:4919857-4919876 | None:intergenic | 20.0% |
| !!! | AACAATTGTTTGATTTCATT+GGG | + | chr6_3:4919892-4919911 | None:intergenic | 20.0% |
| !!! | TAACAATTGTTTGATTTCAT+TGG | + | chr6_3:4919893-4919912 | None:intergenic | 20.0% |
| !! | GAAATCAAACAATTGTTAAT+TGG | - | chr6_3:4919895-4919914 | Msa0934840:CDS | 20.0% |
| !! | CAACAAAAAATTAGATATGA+AGG | + | chr6_3:4919969-4919988 | None:intergenic | 20.0% |
| !!! | CTTCATATCTAATTTTTTGT+TGG | - | chr6_3:4919967-4919986 | Msa0934840:intron | 20.0% |
| !!! | ACTTTATGGATTAAATTGAT+CGG | - | chr6_3:4920172-4920191 | Msa0934840:intron | 20.0% |
| !! | CATATATTCAGATATCAAAA+TGG | - | chr6_3:4920291-4920310 | Msa0934840:intron | 20.0% |
| !! | TATAAAAGGTTACAGTTAAA+GGG | + | chr6_3:4921150-4921169 | None:intergenic | 20.0% |
| !! | ATATAAAAGGTTACAGTTAA+AGG | + | chr6_3:4921151-4921170 | None:intergenic | 20.0% |
| !! | CAAACTAGAAATTAAGATAA+AGG | + | chr6_3:4921849-4921868 | None:intergenic | 20.0% |
| !!! | ATAATTTTGAGGAAAACTAT+AGG | - | chr6_3:4921933-4921952 | Msa0934840:intron | 20.0% |
| !!! | TAATTTTGAGGAAAACTATA+GGG | - | chr6_3:4921934-4921953 | Msa0934840:intron | 20.0% |
| !!! | ATAATTTTGAATCATGAGTT+AGG | + | chr6_3:4922951-4922970 | None:intergenic | 20.0% |
| !! | ATACATCTAAAAATTTGTAG+AGG | + | chr6_3:4923365-4923384 | None:intergenic | 20.0% |
| !! | AAATGAAACCAAGAAATAAA+CGG | + | chr6_3:4923560-4923579 | None:intergenic | 20.0% |
| !! | AATATGAAAATGGATCAAAA+CGG | + | chr6_3:4923746-4923765 | None:intergenic | 20.0% |
| !!! | ATAATGATGTGACATATTTT+AGG | - | chr6_3:4923779-4923798 | Msa0934840:intron | 20.0% |
| !!! | GGAATTTTATTGTAATTTCA+TGG | + | chr6_3:4923850-4923869 | None:intergenic | 20.0% |
| !!! | CATTTTGTTGTTTCTTTTTA+TGG | - | chr6_3:4923887-4923906 | Msa0934840:CDS | 20.0% |
| !!! | AAATTTTATAGTGTACAGAT+AGG | + | chr6_3:4924282-4924301 | None:intergenic | 20.0% |
| !! | TGTCATATCATTATAAATTG+AGG | - | chr6_3:4924471-4924490 | Msa0934840:intron | 20.0% |
| !! | GTCATATCATTATAAATTGA+GGG | - | chr6_3:4924472-4924491 | Msa0934840:intron | 20.0% |
| !! | ATCAGATAATTAGAAAACTT+AGG | - | chr6_3:4924575-4924594 | Msa0934840:CDS | 20.0% |
| !! | ATGTTATAGATTAAACTGAT+CGG | - | chr6_3:4924714-4924733 | Msa0934840:intron | 20.0% |
| !! | TATACATTCAGATATCAAAA+TGG | - | chr6_3:4924830-4924849 | Msa0934840:intron | 20.0% |
| !! | TATAAAAGGTTACAGTTAAA+GGG | + | chr6_3:4921150-4921169 | None:intergenic | 20.0% |
| !! | ATATAAAAGGTTACAGTTAA+AGG | + | chr6_3:4921151-4921170 | None:intergenic | 20.0% |
| !! | TAAGTCTATCATGATATAAA+AGG | + | chr6_3:4925602-4925621 | None:intergenic | 20.0% |
| !! | TAAATTATACCTTGTCTTAT+CGG | + | chr6_3:4925727-4925746 | None:intergenic | 20.0% |
| !! | ACTCATAGTTTACATATAAA+TGG | + | chr6_3:4925798-4925817 | None:intergenic | 20.0% |
| !! | GAAACTAGAAATTAAGATAA+AGG | + | chr6_3:4926296-4926315 | None:intergenic | 20.0% |
| ! | AAAACAAAAAAACTTGAAGG+AGG | + | chr6_3:4918193-4918212 | None:intergenic | 25.0% |
| ! | TGCAAAACAAAAAAACTTGA+AGG | + | chr6_3:4918196-4918215 | None:intergenic | 25.0% |
| !!! | CGTTAAGACTCATTTTTAAA+AGG | + | chr6_3:4919012-4919031 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTTTTTGTGAC+CGG | - | chr6_3:4919050-4919069 | Msa0934840:intron | 25.0% |
| ! | ATAGCCCTTAATTAAACATA+AGG | + | chr6_3:4919186-4919205 | None:intergenic | 25.0% |
| !! | TATATACATGCTGATTACAT+GGG | - | chr6_3:4919203-4919222 | Msa0934840:CDS | 25.0% |
| !!! | TCCGTGCATTATTTTTTTTA+AGG | - | chr6_3:4919290-4919309 | Msa0934840:intron | 25.0% |
| ! | CCCTTAAAAAAAATAATGCA+CGG | + | chr6_3:4919294-4919313 | None:intergenic | 25.0% |
| !!! | CCGTGCATTATTTTTTTTAA+GGG | - | chr6_3:4919291-4919310 | Msa0934840:intron | 25.0% |
| ! | ATTCCACAAAATTTAAAAGG+GGG | + | chr6_3:4919514-4919533 | None:intergenic | 25.0% |
| ! | TATTCCACAAAATTAGAAAG+GGG | + | chr6_3:4919647-4919666 | None:intergenic | 25.0% |
| ! | CATATTCCACAAAATTAGAA+AGG | + | chr6_3:4919649-4919668 | None:intergenic | 25.0% |
| !!! | CTTGTCTAGAACTAAATTTT+TGG | - | chr6_3:4919798-4919817 | Msa0934840:CDS | 25.0% |
| !!! | ATTTTTTGTTGGGAAAAATC+TGG | - | chr6_3:4919978-4919997 | Msa0934840:intron | 25.0% |
| !! | TTAAATGTGTGAAGCATTAT+CGG | - | chr6_3:4920119-4920138 | Msa0934840:CDS | 25.0% |
| !!! | CTCTTTTGTTTGTAACTTTA+TGG | - | chr6_3:4920158-4920177 | Msa0934840:CDS | 25.0% |
| !! | CTTTATGGATTAAATTGATC+GGG | - | chr6_3:4920173-4920192 | Msa0934840:intron | 25.0% |
| !!! | TTTTTTCTGTTGTTGAGAAT+AGG | - | chr6_3:4920382-4920401 | Msa0934840:intron | 25.0% |
| ! | TAAGTCTATCGTGATATAAA+AGG | + | chr6_3:4921164-4921183 | None:intergenic | 25.0% |
| !! | TTGAAATCTGAAGTCTATAA+GGG | - | chr6_3:4921346-4921365 | Msa0934840:intron | 25.0% |
| ! | ATTCCAATATCAAAATGACT+TGG | - | chr6_3:4921379-4921398 | Msa0934840:intron | 25.0% |
| !!! | AAACCAAGTCATTTTGATAT+TGG | + | chr6_3:4921385-4921404 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTTGTGATTCAG+AGG | - | chr6_3:4921467-4921486 | Msa0934840:intron | 25.0% |
| ! | ATGAAAAGAGAGAGAATTTA+AGG | + | chr6_3:4921879-4921898 | None:intergenic | 25.0% |
| !! | GCTCTTAAATGATAATTTTG+AGG | - | chr6_3:4921922-4921941 | Msa0934840:intron | 25.0% |
| !! | GTCTAAAACATTAACAATGT+TGG | + | chr6_3:4922164-4922183 | None:intergenic | 25.0% |
| ! | TTACTAAATAAAGATATCCG+CGG | - | chr6_3:4922562-4922581 | Msa0934840:intron | 25.0% |
| ! | CTTGTTTAATAAAACTGCAA+TGG | - | chr6_3:4922622-4922641 | Msa0934840:intron | 25.0% |
| !!! | TGAGTTTGAATACCTTTTTT+AGG | - | chr6_3:4922810-4922829 | Msa0934840:intron | 25.0% |
| !!! | ATTCTTTTGGATTAGAGATT+TGG | + | chr6_3:4923150-4923169 | None:intergenic | 25.0% |
| ! | TTTCATATTGGAAGACAAAT+TGG | + | chr6_3:4923427-4923446 | None:intergenic | 25.0% |
| ! | AATGAAACCAAGAAATAAAC+GGG | + | chr6_3:4923559-4923578 | None:intergenic | 25.0% |
| !!! | CGGTATGATTTTAAAATTGA+GGG | + | chr6_3:4923726-4923745 | None:intergenic | 25.0% |
| !!! | ACGGTATGATTTTAAAATTG+AGG | + | chr6_3:4923727-4923746 | None:intergenic | 25.0% |
| ! | AGTTCATCATACTGTATTTA+CGG | + | chr6_3:4923997-4924016 | None:intergenic | 25.0% |
| ! | TGAGTGAAGTTTGAAAAAAA+TGG | - | chr6_3:4924095-4924114 | Msa0934840:intron | 25.0% |
| !! | TTACCTTTTATCTTTGTTCT+AGG | - | chr6_3:4924127-4924146 | Msa0934840:CDS | 25.0% |
| ! | AATCCTAGAACAAAGATAAA+AGG | + | chr6_3:4924133-4924152 | None:intergenic | 25.0% |
| !! | TTGATTTGATTGTCTAAACA+CGG | - | chr6_3:4924180-4924199 | Msa0934840:CDS | 25.0% |
| ! | TTATAAATTGAGGGAAAATG+TGG | - | chr6_3:4924481-4924500 | Msa0934840:intron | 25.0% |
| ! | TATAAATTGAGGGAAAATGT+GGG | - | chr6_3:4924482-4924501 | Msa0934840:intron | 25.0% |
| ! | AAAATCGCCTAAATATATCA+AGG | - | chr6_3:4924545-4924564 | Msa0934840:intron | 25.0% |
| ! | AAATCGCCTAAATATATCAA+GGG | - | chr6_3:4924546-4924565 | Msa0934840:CDS | 25.0% |
| ! | AGATAATTAGAAAACTTAGG+AGG | - | chr6_3:4924578-4924597 | Msa0934840:CDS | 25.0% |
| !! | AGCTTTAATGTTATCATCTA+CGG | - | chr6_3:4924616-4924635 | Msa0934840:CDS | 25.0% |
| !!! | TTTTAGTCTTTTAATGTGTG+AGG | - | chr6_3:4924650-4924669 | Msa0934840:CDS | 25.0% |
| ! | ATACATAAATACCGAGTAAA+CGG | + | chr6_3:4924856-4924875 | None:intergenic | 25.0% |
| ! | ATATCATGATAGACTTAAGA+TGG | - | chr6_3:4925605-4925624 | Msa0934840:intron | 25.0% |
| ! | AGTTTACATATAAATGGACA+TGG | + | chr6_3:4925792-4925811 | None:intergenic | 25.0% |
| !! | TTTTTCTTTTTGTGATTCAG+AGG | - | chr6_3:4921467-4921486 | Msa0934840:intron | 25.0% |
| !!! | AACAAATTATTTTTGACAGC+TGG | + | chr6_3:4926001-4926020 | None:intergenic | 25.0% |
| ! | ATTACTTCAAAGTTCAAACA+TGG | + | chr6_3:4926101-4926120 | None:intergenic | 25.0% |
| !! | ACAATCTTGTTCATCAATTT+TGG | - | chr6_3:4926644-4926663 | Msa0934840:intron | 25.0% |
| !!! | ATTAGCATACCTTTTTTCTT+TGG | - | chr6_3:4926749-4926768 | Msa0934840:five_prime_UTR | 25.0% |
| ! | AAAAATGGAGAAAATGTAGT+CGG | + | chr6_3:4926795-4926814 | None:intergenic | 25.0% |
| ! | CAGTAATTTACGCAAAAAAA+TGG | + | chr6_3:4926810-4926829 | None:intergenic | 25.0% |
| AAAAGATTGAGCTTACATGA+AGG | + | chr6_3:4918635-4918654 | None:intergenic | 30.0% | |
| TAAGAACTCAAAAGAAGCTT+TGG | - | chr6_3:4918780-4918799 | Msa0934840:intron | 30.0% | |
| !!! | GTGTTTTTTTTTTTGTGACC+GGG | - | chr6_3:4919051-4919070 | Msa0934840:intron | 30.0% |
| !!! | TGTTTTTTTTTTTGTGACCG+GGG | - | chr6_3:4919052-4919071 | Msa0934840:intron | 30.0% |
| !!! | AAGGTTTTGAATTTAAACCC+CGG | + | chr6_3:4919072-4919091 | None:intergenic | 30.0% |
| ! | CTATATACATGCTGATTACA+TGG | - | chr6_3:4919202-4919221 | Msa0934840:CDS | 30.0% |
| TTCCACAAAATTTAAAAGGG+GGG | + | chr6_3:4919513-4919532 | None:intergenic | 30.0% | |
| TTGTGGAATAAAATTGGTGT+AGG | - | chr6_3:4919525-4919544 | Msa0934840:CDS | 30.0% | |
| TGTGGAATAAAATTGGTGTA+GGG | - | chr6_3:4919526-4919545 | Msa0934840:CDS | 30.0% | |
| !!! | AATTTTTTGGGTAAAATGGG+AGG | - | chr6_3:4919672-4919691 | Msa0934840:intron | 30.0% |
| ATTTCATTGGGTGAAAAAAC+TGG | + | chr6_3:4919880-4919899 | None:intergenic | 30.0% | |
| GAAATGTTAGATGAAACTGA+CGG | + | chr6_3:4919932-4919951 | None:intergenic | 30.0% | |
| TCAACACATCCAACAAAATT+GGG | + | chr6_3:4920473-4920492 | None:intergenic | 30.0% | |
| TTCAACACATCCAACAAAAT+TGG | + | chr6_3:4920474-4920493 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGGATGTGTTGA+AGG | - | chr6_3:4920473-4920492 | Msa0934840:intron | 30.0% |
| !! | AATAAGAGGGTGGATTAATT+TGG | + | chr6_3:4920591-4920610 | None:intergenic | 30.0% |
| ATATCACGATAGACTTAAGA+TGG | - | chr6_3:4921167-4921186 | Msa0934840:intron | 30.0% | |
| ATAACAATAATGTCGCACTT+CGG | + | chr6_3:4921252-4921271 | None:intergenic | 30.0% | |
| ! | CTTGAAATCTGAAGTCTATA+AGG | - | chr6_3:4921345-4921364 | Msa0934840:intron | 30.0% |
| ! | AGAATTGCTAAGTTGAAGAA+AGG | - | chr6_3:4921506-4921525 | Msa0934840:intron | 30.0% |
| AAACTATAGGGTCATATACT+AGG | - | chr6_3:4921946-4921965 | Msa0934840:intron | 30.0% | |
| !!! | GGCATTCTAAAACAGTTTTT+TGG | + | chr6_3:4922143-4922162 | None:intergenic | 30.0% |
| CGTTAAACTGGTTAAGATAA+AGG | - | chr6_3:4922229-4922248 | Msa0934840:intron | 30.0% | |
| AGAAGTTAACCAAAGAACAA+GGG | + | chr6_3:4922310-4922329 | None:intergenic | 30.0% | |
| AAGAAGTTAACCAAAGAACA+AGG | + | chr6_3:4922311-4922330 | None:intergenic | 30.0% | |
| ATACATAGAGTTGCAACATA+AGG | - | chr6_3:4922873-4922892 | Msa0934840:intron | 30.0% | |
| AACATAAGGTCTTAAGTTTG+AGG | - | chr6_3:4922887-4922906 | Msa0934840:intron | 30.0% | |
| GAGTTAGGTCATGTAATAAA+AGG | + | chr6_3:4922936-4922955 | None:intergenic | 30.0% | |
| AAGTCTACTACTTACTACTT+TGG | - | chr6_3:4923094-4923113 | Msa0934840:intron | 30.0% | |
| CGTATACATCAAGAGTAATT+TGG | - | chr6_3:4923464-4923483 | Msa0934840:intron | 30.0% | |
| ! | TATTTGACCCGTTTATTTCT+TGG | - | chr6_3:4923549-4923568 | Msa0934840:CDS | 30.0% |
| ! | ACTCTGCTTTCTTTTTATGT+TGG | - | chr6_3:4923656-4923675 | Msa0934840:intron | 30.0% |
| ! | AATGTGCAGAAGAATTTTCA+AGG | + | chr6_3:4923871-4923890 | None:intergenic | 30.0% |
| ACATCACATTTCTTTCTTCT+TGG | - | chr6_3:4924047-4924066 | Msa0934840:CDS | 30.0% | |
| !! | CTTTGTTCTAGGATTAAGTT+TGG | - | chr6_3:4924138-4924157 | Msa0934840:CDS | 30.0% |
| AAAATGACGTACAGATGAAA+GGG | - | chr6_3:4924346-4924365 | Msa0934840:intron | 30.0% | |
| ATCATGAAATTGCACAATTG+AGG | - | chr6_3:4924509-4924528 | Msa0934840:intron | 30.0% | |
| AATCGCCTAAATATATCAAG+GGG | - | chr6_3:4924547-4924566 | Msa0934840:CDS | 30.0% | |
| TTTGACCCCTTGATATATTT+AGG | + | chr6_3:4924555-4924574 | None:intergenic | 30.0% | |
| GCTTTAATGTTATCATCTAC+GGG | - | chr6_3:4924617-4924636 | Msa0934840:CDS | 30.0% | |
| ! | TTTAATGTGTGAGGCATTAT+CGG | - | chr6_3:4924659-4924678 | Msa0934840:CDS | 30.0% |
| TATTATTGAGAATAGGCATC+TGG | - | chr6_3:4924922-4924941 | Msa0934840:intron | 30.0% | |
| TCAACACATCCAACAAAATT+GGG | + | chr6_3:4920473-4920492 | None:intergenic | 30.0% | |
| TTCAACACATCCAACAAAAT+TGG | + | chr6_3:4920474-4920493 | None:intergenic | 30.0% | |
| ! | AATTTTGTTGGATGTGTTGA+AGG | - | chr6_3:4920473-4920492 | Msa0934840:intron | 30.0% |
| TCAAAATTCTAACCAGAATC+AGG | + | chr6_3:4925102-4925121 | None:intergenic | 30.0% | |
| ! | AAAAAAGTTTGCTCATTGCT+AGG | + | chr6_3:4925825-4925844 | None:intergenic | 30.0% |
| CAGAAACATAAATGAAATCG+AGG | + | chr6_3:4926064-4926083 | None:intergenic | 30.0% | |
| TTTCATCTTATAGGTTACAG+TGG | - | chr6_3:4926133-4926152 | Msa0934840:intron | 30.0% | |
| AAATCTGAAAAATTCCGATC+TGG | + | chr6_3:4926483-4926502 | None:intergenic | 30.0% | |
| TAGTTTCTACAACAGGTTTA+GGG | + | chr6_3:4926691-4926710 | None:intergenic | 30.0% | |
| TTAGTTTCTACAACAGGTTT+AGG | + | chr6_3:4926692-4926711 | None:intergenic | 30.0% | |
| ! | AACAGTTTAGTTTCTACAAC+AGG | + | chr6_3:4926698-4926717 | None:intergenic | 30.0% |
| TGAACTTAGCCAAAGAAAAA+AGG | + | chr6_3:4926761-4926780 | None:intergenic | 30.0% | |
| TAAAAAAGCAAGAAAGGGAG+AGG | - | chr6_3:4918322-4918341 | Msa0934840:intron | 35.0% | |
| TGAAACGTGAAGAGTAAAGA+GGG | + | chr6_3:4918450-4918469 | None:intergenic | 35.0% | |
| TCTCATTGTTCTTTGAGCTT+AGG | + | chr6_3:4919129-4919148 | None:intergenic | 35.0% | |
| AATGAGAGAGTGAGTGTTAT+TGG | - | chr6_3:4919142-4919161 | Msa0934840:CDS | 35.0% | |
| CAAAATTTAAAAGGGGGGTT+TGG | + | chr6_3:4919508-4919527 | None:intergenic | 35.0% | |
| ! | AACCCCCCTTTTAAATTTTG+TGG | - | chr6_3:4919508-4919527 | Msa0934840:CDS | 35.0% |
| ! | TCATCCCCTTTCTAATTTTG+TGG | - | chr6_3:4919640-4919659 | Msa0934840:intron | 35.0% |
| CATTTCATCCCTGCAATTAT+AGG | + | chr6_3:4919730-4919749 | None:intergenic | 35.0% | |
| ACAAGCATACATAAGAGACA+AGG | + | chr6_3:4920324-4920343 | None:intergenic | 35.0% | |
| ATTGTAGGTGTGTTCTACAA+AGG | - | chr6_3:4920425-4920444 | Msa0934840:intron | 35.0% | |
| ! | TCCTTGAATCCCAATTTTGT+TGG | - | chr6_3:4920461-4920480 | Msa0934840:intron | 35.0% |
| TCCAACAAAATTGGGATTCA+AGG | + | chr6_3:4920465-4920484 | None:intergenic | 35.0% | |
| ATTGTCACTGATGACAAAGA+AGG | - | chr6_3:4920542-4920561 | Msa0934840:intron | 35.0% | |
| TGAGAATTCTCATTCTTGTG+AGG | - | chr6_3:4920980-4920999 | Msa0934840:intron | 35.0% | |
| TGTCTTTCCTTCAAGATCAT+AGG | + | chr6_3:4921073-4921092 | None:intergenic | 35.0% | |
| ! | TTGGGAAACTTTTACTCCAA+AGG | - | chr6_3:4921118-4921137 | Msa0934840:intron | 35.0% |
| CCAATTTCTTTCTCCAATTC+AGG | + | chr6_3:4921195-4921214 | None:intergenic | 35.0% | |
| CCTGAATTGGAGAAAGAAAT+TGG | - | chr6_3:4921192-4921211 | Msa0934840:intron | 35.0% | |
| ! | GAAACACATTTTATGTCAGC+TGG | + | chr6_3:4921627-4921646 | None:intergenic | 35.0% |
| AACACCTGAGTTTCATCTAT+AGG | - | chr6_3:4921681-4921700 | Msa0934840:intron | 35.0% | |
| GTAACCTATAGATGAAACTC+AGG | + | chr6_3:4921688-4921707 | None:intergenic | 35.0% | |
| GTTTCATCTATAGGTTACAG+TGG | - | chr6_3:4921690-4921709 | Msa0934840:intron | 35.0% | |
| ATAAACTACCTGTGCATCAA+TGG | + | chr6_3:4921805-4921824 | None:intergenic | 35.0% | |
| ACAAACAAGGACACAAACAA+TGG | + | chr6_3:4922057-4922076 | None:intergenic | 35.0% | |
| GTATCTATGAAGCACAAACA+AGG | + | chr6_3:4922070-4922089 | None:intergenic | 35.0% | |
| GGAAATGAGTAACGTTAAAC+TGG | - | chr6_3:4922217-4922236 | Msa0934840:intron | 35.0% | |
| ! | TTCACAATGTAGTTCTGTTC+AGG | + | chr6_3:4922454-4922473 | None:intergenic | 35.0% |
| TGAACAGAACTACATTGTGA+AGG | - | chr6_3:4922453-4922472 | Msa0934840:intron | 35.0% | |
| !! | TTCTGAGTCTTGTGGTTTTA+AGG | - | chr6_3:4922531-4922550 | Msa0934840:intron | 35.0% |
| AGTACATTATTACAATGCCG+CGG | + | chr6_3:4922582-4922601 | None:intergenic | 35.0% | |
| ! | TTCTGAAAGATGACATCTTG+TGG | + | chr6_3:4922765-4922784 | None:intergenic | 35.0% |
| TGAGTTCTCTAGCCTAAAAA+AGG | + | chr6_3:4922825-4922844 | None:intergenic | 35.0% | |
| ! | TAAGGTCTTAAGTTTGAGGT+TGG | - | chr6_3:4922891-4922910 | Msa0934840:intron | 35.0% |
| CTTCAAATTGCTGAAAGACA+GGG | + | chr6_3:4923185-4923204 | None:intergenic | 35.0% | |
| ! | TCTTTCAGCAATTTGAAGCT+TGG | - | chr6_3:4923187-4923206 | Msa0934840:intron | 35.0% |
| ! | TCTGTTTTCGCTCATGAAAT+TGG | - | chr6_3:4923699-4923718 | Msa0934840:intron | 35.0% |
| GTCAATAATCTCACATCATC+AGG | + | chr6_3:4923825-4923844 | None:intergenic | 35.0% | |
| !! | ACTTTTTCCTCCCAAATGTT+TGG | - | chr6_3:4923924-4923943 | Msa0934840:CDS | 35.0% |
| ! | TGCTTTTGGACCAAACATTT+GGG | + | chr6_3:4923937-4923956 | None:intergenic | 35.0% |
| ! | ATGCTTTTGGACCAAACATT+TGG | + | chr6_3:4923938-4923957 | None:intergenic | 35.0% |
| AAATGTTTGGTCCAAAAGCA+TGG | - | chr6_3:4923937-4923956 | Msa0934840:CDS | 35.0% | |
| ATGTAGTTCAAGCACAAGAA+AGG | + | chr6_3:4924031-4924050 | None:intergenic | 35.0% | |
| GAAAATGACGTACAGATGAA+AGG | - | chr6_3:4924345-4924364 | Msa0934840:intron | 35.0% | |
| ! | ATTGGTAATATCCATGCATG+AGG | - | chr6_3:4924437-4924456 | Msa0934840:intron | 35.0% |
| TATCAAAATGGCCGTTTACT+CGG | - | chr6_3:4924842-4924861 | Msa0934840:intron | 35.0% | |
| GGAGGAAAGAAGAAAATTGT+AGG | - | chr6_3:4924943-4924962 | Msa0934840:intron | 35.0% | |
| ATTGTAGGTGTGTTCTACAA+AGG | - | chr6_3:4920425-4920444 | Msa0934840:intron | 35.0% | |
| CAACACATCCAACAAAATTG+GGG | + | chr6_3:4920472-4920491 | None:intergenic | 35.0% | |
| ATTGTCACAGATGACAAAGA+AGG | - | chr6_3:4925075-4925094 | Msa0934840:intron | 35.0% | |
| CGCTTTCTTAATTCTTTCCT+CGG | + | chr6_3:4925265-4925284 | None:intergenic | 35.0% | |
| !!! | TTACAGTTGCTTTTAACTGC+TGG | - | chr6_3:4925291-4925310 | Msa0934840:intron | 35.0% |
| CTATGATCTTGAAGGAAAGA+CGG | - | chr6_3:4921071-4921090 | Msa0934840:intron | 35.0% | |
| CCAATTTCTTTCTCCAATTC+AGG | + | chr6_3:4921195-4921214 | None:intergenic | 35.0% | |
| CCTGAATTGGAGAAAGAAAT+TGG | - | chr6_3:4921192-4921211 | Msa0934840:intron | 35.0% | |
| ! | ACTTTGGTAGCATTGTATCA+AGG | + | chr6_3:4925674-4925693 | None:intergenic | 35.0% |
| ATAACAACTATGTCGCACTT+TGG | + | chr6_3:4925690-4925709 | None:intergenic | 35.0% | |
| ! | AGAATCGCTAAGTTGAAGAA+AGG | - | chr6_3:4925880-4925899 | Msa0934840:intron | 35.0% |
| TTGATTGTTAACAATGCTCG+TGG | - | chr6_3:4925907-4925926 | Msa0934840:intron | 35.0% | |
| TGATTGTTAACAATGCTCGT+GGG | - | chr6_3:4925908-4925927 | Msa0934840:intron | 35.0% | |
| ACAGCTGAGTTTCATCTTAT+AGG | - | chr6_3:4926124-4926143 | Msa0934840:intron | 35.0% | |
| ATGGTAGTTCCAGAAATATG+AGG | + | chr6_3:4926229-4926248 | None:intergenic | 35.0% | |
| ATAAACAACCTGTGCATCAA+TGG | + | chr6_3:4926248-4926267 | None:intergenic | 35.0% | |
| TTCTTCTCGTAAATGTTGCA+AGG | + | chr6_3:4926396-4926415 | None:intergenic | 35.0% | |
| TTTAGGGATTCTTATTCGTG+CGG | + | chr6_3:4926675-4926694 | None:intergenic | 35.0% | |
| TTCACAATGTAATGCTGTTC+AGG | + | chr6_3:4926918-4926937 | None:intergenic | 35.0% | |
| TAACTTAACCTGAGTGAGGA+AGG | + | chr6_3:4918369-4918388 | None:intergenic | 40.0% | |
| TGCTTAACTTAACCTGAGTG+AGG | + | chr6_3:4918373-4918392 | None:intergenic | 40.0% | |
| AAACGTGAAGAGTAAAGAGG+GGG | + | chr6_3:4918448-4918467 | None:intergenic | 40.0% | |
| GAAACGTGAAGAGTAAAGAG+GGG | + | chr6_3:4918449-4918468 | None:intergenic | 40.0% | |
| GTGAAACGTGAAGAGTAAAG+AGG | + | chr6_3:4918451-4918470 | None:intergenic | 40.0% | |
| ! | CTTTGAAGAAGCAGTGATCA+AGG | + | chr6_3:4918571-4918590 | None:intergenic | 40.0% |
| ! | AAAGAAGCTTTGGTGTGATC+TGG | - | chr6_3:4918790-4918809 | Msa0934840:intron | 40.0% |
| TGACTACTGATGGAGACAAA+GGG | + | chr6_3:4918891-4918910 | None:intergenic | 40.0% | |
| TTGACTACTGATGGAGACAA+AGG | + | chr6_3:4918892-4918911 | None:intergenic | 40.0% | |
| !! | TGACAAGTGTTGACTACTGA+TGG | + | chr6_3:4918901-4918920 | None:intergenic | 40.0% |
| TAGAAAGGGGATGAATTGCA+GGG | + | chr6_3:4919634-4919653 | None:intergenic | 40.0% | |
| TTAGAAAGGGGATGAATTGC+AGG | + | chr6_3:4919635-4919654 | None:intergenic | 40.0% | |
| CTCAGGGATGAAAAATCGAA+TGG | - | chr6_3:4919704-4919723 | Msa0934840:CDS | 40.0% | |
| ATCGAATGGCCTATAATTGC+AGG | - | chr6_3:4919718-4919737 | Msa0934840:CDS | 40.0% | |
| TCGAATGGCCTATAATTGCA+GGG | - | chr6_3:4919719-4919738 | Msa0934840:CDS | 40.0% | |
| GATCCACTATAAAGCTTGGT+GGG | + | chr6_3:4920014-4920033 | None:intergenic | 40.0% | |
| AGATCCACTATAAAGCTTGG+TGG | + | chr6_3:4920015-4920034 | None:intergenic | 40.0% | |
| AATCTTCTTCTTTCCACCAG+AGG | + | chr6_3:4920408-4920427 | None:intergenic | 40.0% | |
| GGTGGAAAGAAGAAGATTGT+AGG | - | chr6_3:4920410-4920429 | Msa0934840:intron | 40.0% | |
| GACAAAGAAGGACTCAATTC+TGG | - | chr6_3:4920554-4920573 | Msa0934840:intron | 40.0% | |
| ACGGCATAGACGTAATAAGA+GGG | + | chr6_3:4920604-4920623 | None:intergenic | 40.0% | |
| TACGGCATAGACGTAATAAG+AGG | + | chr6_3:4920605-4920624 | None:intergenic | 40.0% | |
| GATATCAGGACATTGAGATC+AGG | + | chr6_3:4920778-4920797 | None:intergenic | 40.0% | |
| AATTCTTTCCGCAGTGACAT+AGG | + | chr6_3:4920818-4920837 | None:intergenic | 40.0% | |
| AATGTGATCAGAACCAATGC+CGG | + | chr6_3:4920875-4920894 | None:intergenic | 40.0% | |
| TCACATTGATCTCAATGCTG+CGG | - | chr6_3:4920888-4920907 | Msa0934840:intron | 40.0% | |
| CATAGAGCCTATGATCTTGA+AGG | - | chr6_3:4921063-4921082 | Msa0934840:intron | 40.0% | |
| GATCTTGAAGGAAAGACAGT+TGG | - | chr6_3:4921075-4921094 | Msa0934840:intron | 40.0% | |
| TGAAGGAAAGACAGTTGGAA+CGG | - | chr6_3:4921080-4921099 | Msa0934840:intron | 40.0% | |
| AGTTAAAGGGTTTCAGCCTT+TGG | + | chr6_3:4921137-4921156 | None:intergenic | 40.0% | |
| AGAAATTGGAGCTCAGTTTG+AGG | - | chr6_3:4921206-4921225 | Msa0934840:intron | 40.0% | |
| TACCTTGTCTTATCAGTGAG+AGG | + | chr6_3:4921282-4921301 | None:intergenic | 40.0% | |
| TTGATTGTCAACAATGCTCG+TGG | - | chr6_3:4921533-4921552 | Msa0934840:intron | 40.0% | |
| ATTGCTGATGCTTGTTCTAG+TGG | - | chr6_3:4921578-4921597 | Msa0934840:intron | 40.0% | |
| ! | TAGGTTACAGTGGTGATGTT+TGG | - | chr6_3:4921700-4921719 | Msa0934840:intron | 40.0% |
| TGAGGAGTCATAGCATGATT+AGG | + | chr6_3:4921768-4921787 | None:intergenic | 40.0% | |
| GCTATGACTCCTCATATTTC+TGG | - | chr6_3:4921774-4921793 | Msa0934840:intron | 40.0% | |
| ATGGTGGTTCCAGAAATATG+AGG | + | chr6_3:4921786-4921805 | None:intergenic | 40.0% | |
| ATGGTAACACTGACACATGT+TGG | + | chr6_3:4922038-4922057 | None:intergenic | 40.0% | |
| AACCAAAGAACAAGGGACAA+GGG | + | chr6_3:4922303-4922322 | None:intergenic | 40.0% | |
| TAACCAAAGAACAAGGGACA+AGG | + | chr6_3:4922304-4922323 | None:intergenic | 40.0% | |
| GAGTCAAAGATATGCTTGAG+AGG | - | chr6_3:4922407-4922426 | Msa0934840:intron | 40.0% | |
| !! | TATGCTTGAGAGGCACTTTA+AGG | - | chr6_3:4922417-4922436 | Msa0934840:intron | 40.0% |
| !! | ATGCTTGAGAGGCACTTTAA+GGG | - | chr6_3:4922418-4922437 | Msa0934840:intron | 40.0% |
| ACAGAACTACATTGTGAAGG+AGG | - | chr6_3:4922456-4922475 | Msa0934840:intron | 40.0% | |
| CAGAACTACATTGTGAAGGA+GGG | - | chr6_3:4922457-4922476 | Msa0934840:intron | 40.0% | |
| GATACTACATTCACCGGTAT+TGG | + | chr6_3:4922495-4922514 | None:intergenic | 40.0% | |
| CTCTTCGATACTACATTCAC+CGG | + | chr6_3:4922501-4922520 | None:intergenic | 40.0% | |
| ! | GTGAATGTAGTATCGAAGAG+TGG | - | chr6_3:4922501-4922520 | Msa0934840:intron | 40.0% |
| GCTTCAAATTGCTGAAAGAC+AGG | + | chr6_3:4923186-4923205 | None:intergenic | 40.0% | |
| ! | TTTTGGACCAAACATTTGGG+AGG | + | chr6_3:4923934-4923953 | None:intergenic | 40.0% |
| ! | GTAAGACAGAAGCATGTATG+TGG | + | chr6_3:4924260-4924279 | None:intergenic | 40.0% |
| AAATTGAGGGAAAATGTGGG+AGG | - | chr6_3:4924485-4924504 | Msa0934840:intron | 40.0% | |
| TGCACAATTGAGGAACTTGA+AGG | - | chr6_3:4924519-4924538 | Msa0934840:intron | 40.0% | |
| TATTGAGAATAGGCATCTGG+AGG | - | chr6_3:4924925-4924944 | Msa0934840:intron | 40.0% | |
| ACATCCAACAAAATTGGGGT+TGG | + | chr6_3:4925001-4925020 | None:intergenic | 40.0% | |
| AGATATCAGGACATGCAGAT+CGG | + | chr6_3:4925217-4925236 | None:intergenic | 40.0% | |
| GGTGAAATGGTGTAGATATC+AGG | + | chr6_3:4925230-4925249 | None:intergenic | 40.0% | |
| AATTCTTTCCTCGGTGACAT+AGG | + | chr6_3:4925256-4925275 | None:intergenic | 40.0% | |
| !! | TTGCTTTTAACTGCTGGCAT+TGG | - | chr6_3:4925297-4925316 | Msa0934840:intron | 40.0% |
| ! | AGCGTTGAGATCAATGTGAT+CGG | + | chr6_3:4925325-4925344 | None:intergenic | 40.0% |
| TGAGAATTCTCATTCTCGTG+AGG | - | chr6_3:4925418-4925437 | Msa0934840:intron | 40.0% | |
| CATAGAGCCTATGATCTTGA+AGG | - | chr6_3:4921063-4921082 | Msa0934840:intron | 40.0% | |
| CGTCTTTCCTTCAAGATCAT+AGG | + | chr6_3:4925511-4925530 | None:intergenic | 40.0% | |
| AGTTAAAGGGTTTCAGCCTT+TGG | + | chr6_3:4921137-4921156 | None:intergenic | 40.0% | |
| ACTTAAGATGGAGCCTGAAT+TGG | - | chr6_3:4925617-4925636 | Msa0934840:intron | 40.0% | |
| AGAAATTGGAGCTCAGTTTG+AGG | - | chr6_3:4921206-4921225 | Msa0934840:intron | 40.0% | |
| GATTGTTAACAATGCTCGTG+GGG | - | chr6_3:4925909-4925928 | Msa0934840:intron | 40.0% | |
| ! | TAGGTTACAGTGGTGATGTT+TGG | - | chr6_3:4921700-4921719 | Msa0934840:intron | 40.0% |
| AAATATGAGGAGTCATCGCA+TGG | + | chr6_3:4926216-4926235 | None:intergenic | 40.0% | |
| TTTGGTCATTGGATCCAGAT+CGG | - | chr6_3:4926466-4926485 | Msa0934840:intron | 40.0% | |
| CAGTGACATTGGATTGAGAT+CGG | + | chr6_3:4926563-4926582 | None:intergenic | 40.0% | |
| AGACACTCCAAATCCATCAT+AGG | - | chr6_3:4926620-4926639 | Msa0934840:intron | 40.0% | |
| !! | GATTGTGCCTATGATGGATT+TGG | + | chr6_3:4926630-4926649 | None:intergenic | 40.0% |
| GAACAAGATTGTGCCTATGA+TGG | + | chr6_3:4926636-4926655 | None:intergenic | 40.0% | |
| GAGAAAATGTAGTCGGTAGT+AGG | + | chr6_3:4926788-4926807 | None:intergenic | 40.0% | |
| GAGTCAAAGATATGCTTGAG+AGG | - | chr6_3:4922407-4922426 | Msa0934840:intron | 40.0% | |
| !! | TATGCTTGAGAGGCACTTTA+AGG | - | chr6_3:4922417-4922436 | Msa0934840:intron | 40.0% |
| !! | ATGCTTGAGAGGCACTTTAA+GGG | - | chr6_3:4922418-4922437 | Msa0934840:intron | 40.0% |
| ACAGCATTACATTGTGAAGC+AGG | - | chr6_3:4926920-4926939 | Msa0934840:five_prime_UTR | 40.0% | |
| CAGCATTACATTGTGAAGCA+GGG | - | chr6_3:4926921-4926940 | Msa0934840:five_prime_UTR | 40.0% | |
| GTTGAATCGGCTATGTGATG+AGG | + | chr6_3:4918219-4918238 | None:intergenic | 45.0% | |
| AACGTGAAGAGTAAAGAGGG+GGG | + | chr6_3:4918447-4918466 | None:intergenic | 45.0% | |
| ACCTTCTTCCATCATCACCA+GGG | - | chr6_3:4918608-4918627 | Msa0934840:intron | 45.0% | |
| ! | ATGGGAGGATTAGTAAGCTC+AGG | - | chr6_3:4919687-4919706 | Msa0934840:CDS | 45.0% |
| ! | TGGGAGGATTAGTAAGCTCA+GGG | - | chr6_3:4919688-4919707 | Msa0934840:CDS | 45.0% |
| ! | TTGCCCACCAAGCTTTATAG+TGG | - | chr6_3:4920008-4920027 | Msa0934840:intron | 45.0% |
| GGCAGATCCACTATAAAGCT+TGG | + | chr6_3:4920018-4920037 | None:intergenic | 45.0% | |
| TGTTGTTGAGAATAGGCCTC+TGG | - | chr6_3:4920389-4920408 | Msa0934840:intron | 45.0% | |
| GTAGGTGTGTTCTACAAAGG+CGG | - | chr6_3:4920428-4920447 | Msa0934840:intron | 45.0% | |
| !! | GGATGTGTTGAAGGAGCATT+AGG | - | chr6_3:4920482-4920501 | Msa0934840:intron | 45.0% |
| ATTAGGTATACGCGAGTGGT+TGG | - | chr6_3:4920499-4920518 | Msa0934840:intron | 45.0% | |
| GCATAGACGTAATAAGAGGG+TGG | + | chr6_3:4920601-4920620 | None:intergenic | 45.0% | |
| GGTGAAATGGTGTGGATATC+AGG | + | chr6_3:4920792-4920811 | None:intergenic | 45.0% | |
| CTTGTGAGGAATTTCTTGCC+TGG | - | chr6_3:4920994-4921013 | Msa0934840:intron | 45.0% | |
| TTTCTTGCCTGGTTACCATC+AGG | - | chr6_3:4921005-4921024 | Msa0934840:intron | 45.0% | |
| GTAATAGCCTGATGGTAACC+AGG | + | chr6_3:4921015-4921034 | None:intergenic | 45.0% | |
| GGTTACCATCAGGCTATTAC+CGG | - | chr6_3:4921015-4921034 | Msa0934840:intron | 45.0% | |
| ATTCTCCGGTAATAGCCTGA+TGG | + | chr6_3:4921023-4921042 | None:intergenic | 45.0% | |
| ATCAGGCTATTACCGGAGAA+TGG | - | chr6_3:4921022-4921041 | Msa0934840:intron | 45.0% | |
| ACTTAAGATGGCGCCTGAAT+TGG | - | chr6_3:4921179-4921198 | Msa0934840:intron | 45.0% | |
| AATTGGAGCTCAGTTTGAGG+AGG | - | chr6_3:4921209-4921228 | Msa0934840:intron | 45.0% | |
| TGCCTCTCACTGATAAGACA+AGG | - | chr6_3:4921277-4921296 | Msa0934840:intron | 45.0% | |
| !!! | GATCTTTTGGAGCTGGTTGT+GGG | + | chr6_3:4921728-4921747 | None:intergenic | 45.0% |
| !!! | TGATCTTTTGGAGCTGGTTG+TGG | + | chr6_3:4921729-4921748 | None:intergenic | 45.0% |
| !!! | CATGGATGATCTTTTGGAGC+TGG | + | chr6_3:4921735-4921754 | None:intergenic | 45.0% |
| CAGCTCCAAAAGATCATCCA+TGG | - | chr6_3:4921733-4921752 | Msa0934840:intron | 45.0% | |
| ! | TAGCGCCATGGATGATCTTT+TGG | + | chr6_3:4921741-4921760 | None:intergenic | 45.0% |
| AACTACCTGTGCATCAATGG+TGG | + | chr6_3:4921802-4921821 | None:intergenic | 45.0% | |
| AGAGCATACATGCAAGTGTG+AGG | + | chr6_3:4921907-4921926 | None:intergenic | 45.0% | |
| ! | ACGCCTACAATCTGAAGTGT+CGG | + | chr6_3:4921996-4922015 | None:intergenic | 45.0% |
| TGTTGGACATTCACACGTGT+CGG | + | chr6_3:4922021-4922040 | None:intergenic | 45.0% | |
| TACCCTTGTCCCTTGTTCTT+TGG | - | chr6_3:4922298-4922317 | Msa0934840:intron | 45.0% | |
| GTTCAGTTACGTTATGCTGC+TGG | - | chr6_3:4922385-4922404 | Msa0934840:intron | 45.0% | |
| CATTGTGAAGGAGGGTCAAT+TGG | - | chr6_3:4922465-4922484 | Msa0934840:intron | 45.0% | |
| GTCAATTGGCAAGCCAATAC+CGG | - | chr6_3:4922479-4922498 | Msa0934840:intron | 45.0% | |
| GTTCTGACTTCTGAGTCTTG+TGG | - | chr6_3:4922523-4922542 | Msa0934840:intron | 45.0% | |
| ! | GTCCAAAAGCATGGTGTCTT+TGG | - | chr6_3:4923946-4923965 | Msa0934840:CDS | 45.0% |
| ! | TGCCAAAGACACCATGCTTT+TGG | + | chr6_3:4923951-4923970 | None:intergenic | 45.0% |
| TGGTGTCTTTGGCATCACAA+AGG | - | chr6_3:4923957-4923976 | Msa0934840:CDS | 45.0% | |
| CTGTATTTACGGATCACGCT+TGG | + | chr6_3:4923986-4924005 | None:intergenic | 45.0% | |
| CATGTATGTGGACTTGACTG+TGG | + | chr6_3:4924248-4924267 | None:intergenic | 45.0% | |
| TCTCTAAGTGTCCTCATGCA+TGG | + | chr6_3:4924451-4924470 | None:intergenic | 45.0% | |
| ! | GCATCCAACCCCAATTTTGT+TGG | - | chr6_3:4924994-4925013 | Msa0934840:intron | 45.0% |
| !! | GGATGTGTTGAAGGAGCATT+AGG | - | chr6_3:4920482-4920501 | Msa0934840:intron | 45.0% |
| GACAAAGAAGGACCTGATTC+TGG | - | chr6_3:4925087-4925106 | Msa0934840:intron | 45.0% | |
| GATATCAGGACATGCAGATC+GGG | + | chr6_3:4925216-4925235 | None:intergenic | 45.0% | |
| TCACATTGATCTCAACGCTG+CGG | - | chr6_3:4925326-4925345 | Msa0934840:intron | 45.0% | |
| CACAGGAAGCAACGTAGTAT+CGG | - | chr6_3:4925377-4925396 | Msa0934840:intron | 45.0% | |
| TTTCTTGCCTGGTTACAAGC+AGG | - | chr6_3:4925443-4925462 | Msa0934840:intron | 45.0% | |
| ACCAGCAACATTCCATTCTC+CGG | + | chr6_3:4925475-4925494 | None:intergenic | 45.0% | |
| GATCTTGAAGGAAAGACGGT+TGG | - | chr6_3:4925513-4925532 | Msa0934840:intron | 45.0% | |
| ! | TCGGGAAGCTTTTACTCCAA+AGG | - | chr6_3:4925556-4925575 | Msa0934840:intron | 45.0% |
| ACCTTGTCTTATCGGTGAGA+GGG | + | chr6_3:4925719-4925738 | None:intergenic | 45.0% | |
| TACCTTGTCTTATCGGTGAG+AGG | + | chr6_3:4925720-4925739 | None:intergenic | 45.0% | |
| GTTGCTGATGCTTGTACTAG+TGG | - | chr6_3:4925952-4925971 | Msa0934840:intron | 45.0% | |
| ! | TGTACTAGTGGACACATTGC+AGG | - | chr6_3:4925964-4925983 | Msa0934840:intron | 45.0% |
| !!! | GATCTTTTGGAGCTGGTTGT+GGG | + | chr6_3:4921728-4921747 | None:intergenic | 45.0% |
| !!! | TGATCTTTTGGAGCTGGTTG+TGG | + | chr6_3:4921729-4921748 | None:intergenic | 45.0% |
| !!! | CATGGATGATCTTTTGGAGC+TGG | + | chr6_3:4921735-4921754 | None:intergenic | 45.0% |
| CAGCTCCAAAAGATCATCCA+TGG | - | chr6_3:4921733-4921752 | Msa0934840:intron | 45.0% | |
| ! | TAGCGCCATGGATGATCTTT+TGG | + | chr6_3:4921741-4921760 | None:intergenic | 45.0% |
| GCGATGACTCCTCATATTTC+TGG | - | chr6_3:4926217-4926236 | Msa0934840:intron | 45.0% | |
| TGGAACTACCATTGATGCAC+AGG | - | chr6_3:4926237-4926256 | Msa0934840:intron | 45.0% | |
| AAGCATGTCACATGCAGATG+TGG | - | chr6_3:4926420-4926439 | Msa0934840:intron | 45.0% | |
| AGTCAGCTCATCAGTGACAT+TGG | + | chr6_3:4926574-4926593 | None:intergenic | 45.0% | |
| GTTCAGTTACGTTATGCTGC+TGG | - | chr6_3:4922385-4922404 | Msa0934840:intron | 45.0% | |
| !! | ATCGGTATTGGCTTGCCAAT+TGG | + | chr6_3:4926947-4926966 | None:intergenic | 45.0% |
| !!! | TATCTTTTTTTTATTATTTT+TGG | + | chr6_3:4918757-4918776 | None:intergenic | 5.0% |
| !! | CATTATAAATTTATAATATA+CGG | + | chr6_3:4919321-4919340 | None:intergenic | 5.0% |
| !!! | TTAATTTTAAATTTTAAAAG+TGG | + | chr6_3:4919346-4919365 | None:intergenic | 5.0% |
| !! | AATAATTTACTATAATAAAT+GGG | + | chr6_3:4920039-4920058 | None:intergenic | 5.0% |
| !!! | TATATATATTAGTTTAATTA+CGG | + | chr6_3:4920623-4920642 | None:intergenic | 5.0% |
| !!! | TGTTTTTTAATTTTTAAAAT+TGG | - | chr6_3:4924419-4924438 | Msa0934840:intron | 5.0% |
| AGCAAGAAAGGGAGAGGAGT+TGG | - | chr6_3:4918328-4918347 | Msa0934840:intron | 50.0% | |
| AGAAAGGGAGAGGAGTTGGA+AGG | - | chr6_3:4918332-4918351 | Msa0934840:intron | 50.0% | |
| GGAGAGGAGTTGGAAGGAAA+GGG | - | chr6_3:4918338-4918357 | Msa0934840:intron | 50.0% | |
| CACCTTCTTCCATCATCACC+AGG | - | chr6_3:4918607-4918626 | Msa0934840:intron | 50.0% | |
| !! | TCCCTGGTGATGATGGAAGA+AGG | + | chr6_3:4918612-4918631 | None:intergenic | 50.0% |
| ! | ATGAAGGTCCCTGGTGATGA+TGG | + | chr6_3:4918619-4918638 | None:intergenic | 50.0% |
| TGAGCTTACATGAAGGTCCC+TGG | + | chr6_3:4918628-4918647 | None:intergenic | 50.0% | |
| CTGACATCGCGTGAATGTCA+CGG | + | chr6_3:4918861-4918880 | None:intergenic | 50.0% | |
| CTACTGATGGAGACAAAGGG+TGG | + | chr6_3:4918888-4918907 | None:intergenic | 50.0% | |
| TGTTGAGAATAGGCCTCTGG+TGG | - | chr6_3:4920392-4920411 | Msa0934840:intron | 50.0% | |
| GAGCATTAGGTATACGCGAG+TGG | - | chr6_3:4920495-4920514 | Msa0934840:intron | 50.0% | |
| GGAATGTGCTTCTCGAGTTC+TGG | + | chr6_3:4920757-4920776 | None:intergenic | 50.0% | |
| ATAGGCAGGGTGAAATGGTG+TGG | + | chr6_3:4920800-4920819 | None:intergenic | 50.0% | |
| GTGACATAGGCAGGGTGAAA+TGG | + | chr6_3:4920805-4920824 | None:intergenic | 50.0% | |
| TTTCCGCAGTGACATAGGCA+GGG | + | chr6_3:4920813-4920832 | None:intergenic | 50.0% | |
| TTAGAGCTGCTTCTAACCGC+CGG | - | chr6_3:4920853-4920872 | Msa0934840:intron | 50.0% | |
| !! | TGCTGGTTTAACTGTCGCAG+AGG | - | chr6_3:4920915-4920934 | Msa0934840:intron | 50.0% |
| TTAACTGTCGCAGAGGTCAC+AGG | - | chr6_3:4920922-4920941 | Msa0934840:intron | 50.0% | |
| CACAGGAAGCAACACTGTGT+CGG | - | chr6_3:4920939-4920958 | Msa0934840:intron | 50.0% | |
| ACCGGAGAATGGAATGTTGC+TGG | - | chr6_3:4921033-4921052 | Msa0934840:intron | 50.0% | |
| GCCAGCAACATTCCATTCTC+CGG | + | chr6_3:4921037-4921056 | None:intergenic | 50.0% | |
| GGAAAGACAGTTGGAACGGT+CGG | - | chr6_3:4921084-4921103 | Msa0934840:intron | 50.0% | |
| ACGCATGAATACACAACGCG+TGG | + | chr6_3:4921433-4921452 | None:intergenic | 50.0% | |
| ! | CAATGCTCGTGGAGCACTTA+TGG | - | chr6_3:4921544-4921563 | Msa0934840:intron | 50.0% |
| ! | TGTTCTAGTGGACACGTTGC+AGG | - | chr6_3:4921590-4921609 | Msa0934840:intron | 50.0% |
| TGATTAGGCATGTAGCGCCA+TGG | + | chr6_3:4921753-4921772 | None:intergenic | 50.0% | |
| TGGAACCACCATTGATGCAC+AGG | - | chr6_3:4921794-4921813 | Msa0934840:intron | 50.0% | |
| ! | GCACCGACACTTCAGATTGT+AGG | - | chr6_3:4921990-4922009 | Msa0934840:intron | 50.0% |
| ! | GCTGCTGCGAGCTATTCTTT+TGG | + | chr6_3:4923163-4923182 | None:intergenic | 50.0% |
| GAGCATTAGGTATACGCGAG+TGG | - | chr6_3:4920495-4920514 | Msa0934840:intron | 50.0% | |
| GGAATGTGCTTCTCGAGTTC+TGG | + | chr6_3:4920757-4920776 | None:intergenic | 50.0% | |
| GTGACATAGGCAGGGTGAAA+TGG | + | chr6_3:4920805-4920824 | None:intergenic | 50.0% | |
| TTTCCTCGGTGACATAGGCA+GGG | + | chr6_3:4925251-4925270 | None:intergenic | 50.0% | |
| !! | CAACGTAGTATCGGTTGCTG+AGG | - | chr6_3:4925386-4925405 | Msa0934840:intron | 50.0% |
| CTCGTGAGGAATTTCTTGCC+TGG | - | chr6_3:4925432-4925451 | Msa0934840:intron | 50.0% | |
| GGAAAGACGGTTGGAACAGT+TGG | - | chr6_3:4925522-4925541 | Msa0934840:intron | 50.0% | |
| !! | ACAGTTGGTGCTGGACGAAT+CGG | - | chr6_3:4925537-4925556 | Msa0934840:intron | 50.0% |
| CCTTGTCTTATCGGTGAGAG+GGG | + | chr6_3:4925718-4925737 | None:intergenic | 50.0% | |
| TGAGGAGTCATCGCATGGTT+TGG | + | chr6_3:4926211-4926230 | None:intergenic | 50.0% | |
| TGCATTCACGCGCTCATCTT+TGG | - | chr6_3:4926448-4926467 | Msa0934840:intron | 50.0% | |
| ACGCGCTCATCTTTGGTCAT+TGG | - | chr6_3:4926455-4926474 | Msa0934840:intron | 50.0% | |
| !! | AAAGTATTGGGCGTGAGCTC+TGG | - | chr6_3:4926532-4926551 | Msa0934840:CDS | 50.0% |
| !! | TGAGAGGCACTTTAAGGGTG+AGG | - | chr6_3:4922423-4922442 | Msa0934840:intron | 50.0% |
| CATTGTGAAGCAGGGCCAAT+TGG | - | chr6_3:4926929-4926948 | Msa0934840:five_prime_UTR | 50.0% | |
| GGGAGAGGAGTTGGAAGGAA+AGG | - | chr6_3:4918337-4918356 | Msa0934840:intron | 55.0% | |
| GGGTAAAGCCTTCCTCACTC+AGG | - | chr6_3:4918358-4918377 | Msa0934840:intron | 55.0% | |
| GGGGTTTGGAAGAGCTTACG+TGG | + | chr6_3:4919494-4919513 | None:intergenic | 55.0% | |
| CGCGAGTGGTTGGAATCACA+AGG | - | chr6_3:4920509-4920528 | Msa0934840:intron | 55.0% | |
| TCACCCTGCCTATGTCACTG+CGG | - | chr6_3:4920807-4920826 | Msa0934840:intron | 55.0% | |
| CTTTCCGCAGTGACATAGGC+AGG | + | chr6_3:4920814-4920833 | None:intergenic | 55.0% | |
| GTGATCAGAACCAATGCCGG+CGG | + | chr6_3:4920872-4920891 | None:intergenic | 55.0% | |
| !! | CAACACTGTGTCGGTTGCTG+AGG | - | chr6_3:4920948-4920967 | Msa0934840:intron | 55.0% |
| CGCGAGTGGCTTGAATCACA+AGG | - | chr6_3:4925042-4925061 | Msa0934840:intron | 55.0% | |
| CTTTCCTCGGTGACATAGGC+AGG | + | chr6_3:4925252-4925271 | None:intergenic | 55.0% | |
| !! | TGCTGGTTTAACCGTCGCAG+AGG | - | chr6_3:4925353-4925372 | Msa0934840:intron | 55.0% |
| TTAACCGTCGCAGAGGTCAC+AGG | - | chr6_3:4925360-4925379 | Msa0934840:intron | 55.0% | |
| GCAACAGCCTGCTTGTAACC+AGG | + | chr6_3:4925453-4925472 | None:intergenic | 55.0% | |
| GGTTACAAGCAGGCTGTTGC+CGG | - | chr6_3:4925453-4925472 | Msa0934840:intron | 55.0% | |
| GCCGGAGAATGGAATGTTGC+TGG | - | chr6_3:4925471-4925490 | Msa0934840:intron | 55.0% | |
| ! | ACGGTTGGAACAGTTGGTGC+TGG | - | chr6_3:4925528-4925547 | Msa0934840:intron | 55.0% |
| !! | CAGTTGGTGCTGGACGAATC+GGG | - | chr6_3:4925538-4925557 | Msa0934840:intron | 55.0% |
| CCCCTCTCACCGATAAGACA+AGG | - | chr6_3:4925715-4925734 | Msa0934840:intron | 55.0% | |
| CAATGCTCGTGGGGCGATTA+TGG | - | chr6_3:4925918-4925937 | Msa0934840:intron | 55.0% | |
| ! | TGGTTTGGCATGTAGCGCCA+TGG | + | chr6_3:4926196-4926215 | None:intergenic | 55.0% |
| CTGCTTCTAACCGCCGGCAT+TGG | - | chr6_3:4920859-4920878 | Msa0934840:intron | 60.0% | |
| ACAGTTGGAACGGTCGGTGC+TGG | - | chr6_3:4921090-4921109 | Msa0934840:intron | 60.0% | |
| !! | ACGGTCGGTGCTGGACGAAT+TGG | - | chr6_3:4921099-4921118 | Msa0934840:intron | 60.0% |
| !! | CGGTCGGTGCTGGACGAATT+GGG | - | chr6_3:4921100-4921119 | Msa0934840:intron | 60.0% |
| TCACCCTGCCTATGTCACCG+AGG | - | chr6_3:4925245-4925264 | Msa0934840:intron | 60.0% | |
| GCTTCCTGTGACCTCTGCGA+CGG | + | chr6_3:4920929-4920948 | None:intergenic | 60.0% | |
| AGCAGGCTGTTGCCGGAGAA+TGG | - | chr6_3:4925460-4925479 | Msa0934840:intron | 60.0% | |
| CTCAATGCTGCGGCTGCTGC+TGG | - | chr6_3:4920898-4920917 | Msa0934840:intron | 65.0% | |
| CTCAACGCTGCGGCTGCTGC+TGG | - | chr6_3:4925336-4925355 | Msa0934840:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 4918153 | 4926968 | 4918153 | ID=Msa0934840;Name=Msa0934840 |
| chr6_3 | mRNA | 4918153 | 4926968 | 4918153 | ID=Msa0934840-mRNA-1;Parent=Msa0934840;Name=Msa0934840-mRNA-1;_AED=0.15;_eAED=0.16;_QI=263|0.35|0.33|1|0.5|0.46|15|0|685 |
| chr6_3 | exon | 4918153 | 4918266 | 4918153 | ID=Msa0934840-mRNA-1:exon:1577;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4918863 | 4918975 | 4918863 | ID=Msa0934840-mRNA-1:exon:1576;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4919136 | 4919260 | 4919136 | ID=Msa0934840-mRNA-1:exon:1575;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4919430 | 4919656 | 4919430 | ID=Msa0934840-mRNA-1:exon:1574;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4919687 | 4919925 | 4919687 | ID=Msa0934840-mRNA-1:exon:1573;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4920013 | 4920184 | 4920013 | ID=Msa0934840-mRNA-1:exon:1572;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4922421 | 4922428 | 4922421 | ID=Msa0934840-mRNA-1:exon:1571;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4922643 | 4922730 | 4922643 | ID=Msa0934840-mRNA-1:exon:1570;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4923306 | 4923418 | 4923306 | ID=Msa0934840-mRNA-1:exon:1569;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4923510 | 4923634 | 4923510 | ID=Msa0934840-mRNA-1:exon:1568;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4923868 | 4924094 | 4923868 | ID=Msa0934840-mRNA-1:exon:1567;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4924125 | 4924363 | 4924125 | ID=Msa0934840-mRNA-1:exon:1566;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4924546 | 4924717 | 4924546 | ID=Msa0934840-mRNA-1:exon:1565;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4926483 | 4926614 | 4926483 | ID=Msa0934840-mRNA-1:exon:1564;Parent=Msa0934840-mRNA-1 |
| chr6_3 | exon | 4926742 | 4926968 | 4926742 | ID=Msa0934840-mRNA-1:exon:1563;Parent=Msa0934840-mRNA-1 |
| chr6_3 | five_prime_UTR | 4926742 | 4926968 | 4926742 | ID=Msa0934840-mRNA-1:five_prime_utr;Parent=Msa0934840-mRNA-1 |
| chr6_3 | five_prime_UTR | 4926579 | 4926614 | 4926579 | ID=Msa0934840-mRNA-1:five_prime_utr;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4926483 | 4926578 | 4926483 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4924546 | 4924717 | 4924546 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4924125 | 4924363 | 4924125 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4923868 | 4924094 | 4923868 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4923510 | 4923634 | 4923510 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4923306 | 4923418 | 4923306 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4922643 | 4922730 | 4922643 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4922421 | 4922428 | 4922421 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4920013 | 4920184 | 4920013 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4919687 | 4919925 | 4919687 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4919430 | 4919656 | 4919430 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4919136 | 4919260 | 4919136 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4918863 | 4918975 | 4918863 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| chr6_3 | CDS | 4918153 | 4918266 | 4918153 | ID=Msa0934840-mRNA-1:cds;Parent=Msa0934840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
