Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959140 | sp|O95562|SFT2B_HUMAN | 36.145 | 166 | 89 | 2 | 12 | 173 | 6 | 158 | 2.20e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959140 | I3T2F0 | 99.438 | 178 | 1 | 0 | 1 | 178 | 1 | 178 | 8.09e-127 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0959140 | 0.812526 | 4.055150e-51 | -8.615850e-47 |
| Msa0021510 | Msa0959140 | 0.808050 | 3.746180e-50 | -8.615850e-47 |
| Msa0032090 | Msa0959140 | 0.831339 | 1.765562e-55 | -8.615850e-47 |
| Msa0032430 | Msa0959140 | 0.829096 | 6.232196e-55 | -8.615850e-47 |
| Msa0033260 | Msa0959140 | 0.802598 | 5.199776e-49 | -8.615850e-47 |
| Msa0047030 | Msa0959140 | 0.807076 | 6.030986e-50 | -8.615850e-47 |
| Msa0063890 | Msa0959140 | 0.815681 | 8.163316e-52 | -8.615850e-47 |
| Msa0068680 | Msa0959140 | 0.800112 | 1.678724e-48 | -8.615850e-47 |
| Msa0079380 | Msa0959140 | 0.821371 | 4.184242e-53 | -8.615850e-47 |
| Msa0084380 | Msa0959140 | 0.801821 | 7.514814e-49 | -8.615850e-47 |
| Msa0089630 | Msa0959140 | 0.826201 | 3.089728e-54 | -8.615850e-47 |
| Msa0101440 | Msa0959140 | 0.819406 | 1.181011e-52 | -8.615850e-47 |
| Msa0114060 | Msa0959140 | 0.823043 | 1.713015e-53 | -8.615850e-47 |
| Msa0116850 | Msa0959140 | 0.804525 | 2.071738e-49 | -8.615850e-47 |
| Msa0606720 | Msa0959140 | 0.807866 | 4.100672e-50 | -8.615850e-47 |
| Msa0607050 | Msa0959140 | 0.823147 | 1.619699e-53 | -8.615850e-47 |
| Msa0615710 | Msa0959140 | 0.816803 | 4.581164e-52 | -8.615850e-47 |
| Msa0625720 | Msa0959140 | 0.817292 | 3.556649e-52 | -8.615850e-47 |
| Msa0661650 | Msa0959140 | 0.817160 | 3.808188e-52 | -8.615850e-47 |
| Msa0663390 | Msa0959140 | 0.826384 | 2.794152e-54 | -8.615850e-47 |
| Msa0690150 | Msa0959140 | 0.801768 | 7.704646e-49 | -8.615850e-47 |
| Msa0693010 | Msa0959140 | -0.842503 | 2.484759e-58 | -8.615850e-47 |
| Msa0698770 | Msa0959140 | 0.807256 | 5.524371e-50 | -8.615850e-47 |
| Msa0707250 | Msa0959140 | 0.821671 | 3.565936e-53 | -8.615850e-47 |
| Msa0709400 | Msa0959140 | 0.842180 | 3.027319e-58 | -8.615850e-47 |
| Msa0725050 | Msa0959140 | 0.819919 | 9.017164e-53 | -8.615850e-47 |
| Msa0730430 | Msa0959140 | 0.816085 | 6.631543e-52 | -8.615850e-47 |
| Msa0831110 | Msa0959140 | 0.819530 | 1.106895e-52 | -8.615850e-47 |
| Msa0124060 | Msa0959140 | 0.810061 | 1.390269e-50 | -8.615850e-47 |
| Msa0136070 | Msa0959140 | 0.804840 | 1.780304e-49 | -8.615850e-47 |
| Msa0145440 | Msa0959140 | 0.803613 | 3.206105e-49 | -8.615850e-47 |
| Msa0159930 | Msa0959140 | 0.808464 | 3.058426e-50 | -8.615850e-47 |
| Msa0168500 | Msa0959140 | 0.805815 | 1.112588e-49 | -8.615850e-47 |
| Msa0172070 | Msa0959140 | 0.824511 | 7.756561e-54 | -8.615850e-47 |
| Msa0175780 | Msa0959140 | 0.824339 | 8.516310e-54 | -8.615850e-47 |
| Msa0189320 | Msa0959140 | 0.845320 | 4.370948e-59 | -8.615850e-47 |
| Msa0211150 | Msa0959140 | 0.846980 | 1.544586e-59 | -8.615850e-47 |
| Msa0221470 | Msa0959140 | 0.808210 | 3.464711e-50 | -8.615850e-47 |
| Msa0378720 | Msa0959140 | 0.805658 | 1.200563e-49 | -8.615850e-47 |
| Msa0386090 | Msa0959140 | 0.815961 | 7.070151e-52 | -8.615850e-47 |
| Msa0386850 | Msa0959140 | 0.816955 | 4.234373e-52 | -8.615850e-47 |
| Msa0402650 | Msa0959140 | 0.810318 | 1.223570e-50 | -8.615850e-47 |
| Msa0403950 | Msa0959140 | 0.800459 | 1.426774e-48 | -8.615850e-47 |
| Msa0403970 | Msa0959140 | 0.810358 | 1.199455e-50 | -8.615850e-47 |
| Msa0425170 | Msa0959140 | 0.804090 | 2.552826e-49 | -8.615850e-47 |
| Msa0428080 | Msa0959140 | 0.808863 | 2.512583e-50 | -8.615850e-47 |
| Msa0464680 | Msa0959140 | 0.826040 | 3.373357e-54 | -8.615850e-47 |
| Msa0467490 | Msa0959140 | 0.819248 | 1.283375e-52 | -8.615850e-47 |
| Msa0479170 | Msa0959140 | 0.827883 | 1.223253e-54 | -8.615850e-47 |
| Msa0481530 | Msa0959140 | 0.813814 | 2.115449e-51 | -8.615850e-47 |
| Msa0260680 | Msa0959140 | 0.828910 | 6.914751e-55 | -8.615850e-47 |
| Msa0266350 | Msa0959140 | 0.807386 | 5.185015e-50 | -8.615850e-47 |
| Msa0271510 | Msa0959140 | 0.838815 | 2.298144e-57 | -8.615850e-47 |
| Msa0279220 | Msa0959140 | 0.800277 | 1.553872e-48 | -8.615850e-47 |
| Msa0280090 | Msa0959140 | 0.827112 | 1.872249e-54 | -8.615850e-47 |
| Msa0287740 | Msa0959140 | 0.806837 | 6.776974e-50 | -8.615850e-47 |
| Msa0309770 | Msa0959140 | 0.846505 | 2.082167e-59 | -8.615850e-47 |
| Msa0318980 | Msa0959140 | 0.806914 | 6.524902e-50 | -8.615850e-47 |
| Msa0334550 | Msa0959140 | 0.827457 | 1.547963e-54 | -8.615850e-47 |
| Msa0345970 | Msa0959140 | 0.804523 | 2.073701e-49 | -8.615850e-47 |
| Msa0501460 | Msa0959140 | 0.804560 | 2.037645e-49 | -8.615850e-47 |
| Msa0511370 | Msa0959140 | 0.810144 | 1.333621e-50 | -8.615850e-47 |
| Msa0529890 | Msa0959140 | 0.815424 | 9.312552e-52 | -8.615850e-47 |
| Msa0572840 | Msa0959140 | 0.809718 | 1.647368e-50 | -8.615850e-47 |
| Msa0585560 | Msa0959140 | 0.817714 | 2.857460e-52 | -8.615850e-47 |
| Msa0871270 | Msa0959140 | 0.823352 | 1.450710e-53 | -8.615850e-47 |
| Msa0880950 | Msa0959140 | 0.803840 | 2.876218e-49 | -8.615850e-47 |
| Msa0920640 | Msa0959140 | 0.873278 | 1.663748e-67 | -8.615850e-47 |
| Msa0924450 | Msa0959140 | 0.804671 | 1.931871e-49 | -8.615850e-47 |
| Msa0938210 | Msa0959140 | 0.808348 | 3.236444e-50 | -8.615850e-47 |
| Msa0938220 | Msa0959140 | 0.818794 | 1.627443e-52 | -8.615850e-47 |
| Msa0959140 | Msa0979730 | 0.855046 | 8.205513e-62 | -8.615850e-47 |
| Msa0959140 | Msa0990680 | 0.802407 | 5.692000e-49 | -8.615850e-47 |
| Msa0959140 | Msa0994950 | 0.974041 | 1.835313e-137 | -8.615850e-47 |
| Msa0959140 | Msa1004840 | 0.812575 | 3.956182e-51 | -8.615850e-47 |
| Msa0959140 | Msa1018980 | 0.809796 | 1.585387e-50 | -8.615850e-47 |
| Msa0959140 | Msa1020670 | 0.800156 | 1.644572e-48 | -8.615850e-47 |
| Msa0959140 | Msa1033400 | 0.808698 | 2.725098e-50 | -8.615850e-47 |
| Msa0959140 | Msa1051880 | 0.814632 | 1.395539e-51 | -8.615850e-47 |
| Msa0959140 | Msa1081980 | 0.830773 | 2.431791e-55 | -8.615850e-47 |
| Msa0959140 | Msa1084960 | 0.805919 | 1.058156e-49 | -8.615850e-47 |
| Msa0959140 | Msa1101090 | 0.816478 | 5.417527e-52 | -8.615850e-47 |
| Msa0959140 | Msa1124960 | 0.836459 | 9.245792e-57 | -8.615850e-47 |
| Msa0959140 | Msa1142020 | 0.807791 | 4.253162e-50 | -8.615850e-47 |
| Msa0959140 | Msa1162270 | 0.807213 | 5.640858e-50 | -8.615850e-47 |
| Msa0959140 | Msa1183120 | 0.806170 | 9.369248e-50 | -8.615850e-47 |
| Msa0959140 | Msa1204530 | 0.811880 | 5.612059e-51 | -8.615850e-47 |
| Msa0959140 | Msa1205280 | 0.810121 | 1.349072e-50 | -8.615850e-47 |
| Msa0959140 | Msa1209460 | 0.825314 | 5.015450e-54 | -8.615850e-47 |
| Msa0959140 | Msa1229500 | 0.826982 | 2.011688e-54 | -8.615850e-47 |
| Msa0959140 | Msa1239920 | 0.817026 | 4.082929e-52 | -8.615850e-47 |
| Msa0959140 | Msa1246510 | 0.800105 | 1.684402e-48 | -8.615850e-47 |
| Msa0959140 | Msa1271990 | 0.843033 | 1.797309e-58 | -8.615850e-47 |
| Msa0959140 | Msa1296760 | 0.804395 | 2.204932e-49 | -8.615850e-47 |
| Msa0959140 | Msa1297230 | 0.824276 | 8.813234e-54 | -8.615850e-47 |
| Msa0959140 | Msa1309790 | 0.812958 | 3.262376e-51 | -8.615850e-47 |
| Msa0959140 | Msa1314650 | 0.812905 | 3.350107e-51 | -8.615850e-47 |
| Msa0959140 | Msa1320410 | 0.805834 | 1.102235e-49 | -8.615850e-47 |
| Msa0959140 | Msa1331000 | 0.812745 | 3.631427e-51 | -8.615850e-47 |
| Msa0959140 | Msa1335540 | 0.808246 | 3.403171e-50 | -8.615850e-47 |
| Msa0959140 | Msa1343430 | 0.802322 | 5.927317e-49 | -8.615850e-47 |
| Msa0959140 | Msa1351890 | 0.813154 | 2.955593e-51 | -8.615850e-47 |
| Msa0959140 | Msa1353980 | 0.806801 | 6.893761e-50 | -8.615850e-47 |
| Msa0959140 | Msa1382620 | 0.804330 | 2.275308e-49 | -8.615850e-47 |
| Msa0959140 | Msa1387870 | 0.804772 | 1.840074e-49 | -8.615850e-47 |
| Msa0959140 | Msa1392240 | 0.807223 | 5.614348e-50 | -8.615850e-47 |
| Msa0959140 | Msa1393570 | 0.831908 | 1.278293e-55 | -8.615850e-47 |
| Msa0959140 | Msa1400870 | -0.837734 | 4.364977e-57 | -8.615850e-47 |
| Msa0959140 | Msa1409700 | 0.800653 | 1.303007e-48 | -8.615850e-47 |
| Msa0959140 | Msa1419370 | 0.815353 | 9.655075e-52 | -8.615850e-47 |
| Msa0959140 | Msa1425880 | 0.800335 | 1.512692e-48 | -8.615850e-47 |
| Msa0959140 | Msa1432420 | 0.816008 | 6.898820e-52 | -8.615850e-47 |
| Msa0959140 | Msa1440560 | 0.816495 | 5.370458e-52 | -8.615850e-47 |
| Msa0959140 | Msa1464810 | 0.854396 | 1.265491e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959140 | MtrunA17_Chr6g0477091 | 99.438 | 178 | 1 | 0 | 1 | 178 | 1 | 178 | 1.56e-130 | 363 |
| Msa0959140 | MtrunA17_Chr1g0157771 | 55.696 | 158 | 63 | 1 | 21 | 178 | 12 | 162 | 4.67e-58 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0959140 | AT5G23550.1 | 74.719 | 178 | 42 | 2 | 1 | 178 | 1 | 175 | 1.18e-98 | 282 |
| Msa0959140 | AT5G24170.1 | 58.042 | 143 | 59 | 1 | 36 | 177 | 20 | 162 | 1.47e-54 | 170 |
| Msa0959140 | AT5G24170.2 | 55.000 | 100 | 44 | 1 | 36 | 134 | 20 | 119 | 3.58e-32 | 112 |
| Msa0959140 | AT4G26550.1 | 34.211 | 114 | 70 | 1 | 56 | 164 | 93 | 206 | 6.21e-11 | 59.3 |
| Msa0959140 | AT4G26550.2 | 34.211 | 114 | 70 | 1 | 56 | 164 | 32 | 145 | 7.09e-11 | 58.2 |
Find 47 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAAGCTCTTTCGCTTTCA+TGG | 0.160215 | 6_3:+75513036 | Msa0959140:CDS |
| CATCATCGATACTTGCCTTT+TGG | 0.243479 | 6_3:-75518096 | None:intergenic |
| TTCCTCAAACCAATCAAGTT+TGG | 0.259395 | 6_3:+75515120 | Msa0959140:CDS |
| ATTTGTCACCAGAGATTATA+TGG | 0.290063 | 6_3:+75514840 | Msa0959140:intron |
| CTTGCGATTATCTTGGAGTT+TGG | 0.300730 | 6_3:+75518313 | Msa0959140:CDS |
| ACTATGGATCTGTGATTTAT+AGG | 0.307110 | 6_3:-75512874 | None:intergenic |
| TCCTCAAACCAATCAAGTTT+GGG | 0.333791 | 6_3:+75515121 | Msa0959140:CDS |
| TATCATACTTGCGATGTATA+TGG | 0.341256 | 6_3:-75518147 | None:intergenic |
| CTTTCGACTATGTCTGAAAT+AGG | 0.343722 | 6_3:+75519533 | Msa0959140:three_prime_UTR |
| AAGAAAGAGAGAAGAAACTA+TGG | 0.344571 | 6_3:-75512890 | None:intergenic |
| GACATTTCTTGCGATTATCT+TGG | 0.352149 | 6_3:+75518306 | Msa0959140:CDS |
| AATGTTATCCCAAACTTGAT+TGG | 0.371483 | 6_3:-75515129 | None:intergenic |
| TTTGCCATTTGCTTTGCTGC+TGG | 0.373336 | 6_3:+75514864 | Msa0959140:CDS |
| TCTTGGAAATTTGCTTTCAC+TGG | 0.383477 | 6_3:+75515155 | Msa0959140:CDS |
| TGGAGTTTGGAGCACTAGTT+TGG | 0.397702 | 6_3:+75518326 | Msa0959140:CDS |
| GTCCATGGTTTCAAGGATCA+TGG | 0.431757 | 6_3:+75519178 | Msa0959140:CDS |
| TTTGGGATAACATTCACTCT+TGG | 0.432757 | 6_3:+75515138 | Msa0959140:CDS |
| TTGCGAGGTCCATGGTTTCA+AGG | 0.447760 | 6_3:+75519171 | Msa0959140:CDS |
| TCCCAAACTTGATTGGTTTG+AGG | 0.451750 | 6_3:-75515122 | None:intergenic |
| GAAACCATGGACCTCGCAAA+AGG | 0.453828 | 6_3:-75519167 | None:intergenic |
| CTTCGAGAAAGTGAAAATAA+TGG | 0.460885 | 6_3:+75512964 | Msa0959140:CDS |
| GACATAGTCGAAAGCACCAC+TGG | 0.480195 | 6_3:-75519524 | None:intergenic |
| GAACTGCATTGATGATACTC+TGG | 0.481859 | 6_3:+75519261 | Msa0959140:three_prime_UTR |
| CTTGGAAATTTGCTTTCACT+GGG | 0.482081 | 6_3:+75515156 | Msa0959140:CDS |
| GCTGTTGCATAAATACGAAC+AGG | 0.487558 | 6_3:-75518125 | None:intergenic |
| AGAGGCACAAGCTGCTGCAT+TGG | 0.489920 | 6_3:+75513009 | Msa0959140:CDS |
| AGTGAAAATAATGGTGGGAA+TGG | 0.497361 | 6_3:+75512973 | Msa0959140:CDS |
| TACTCCAGCAGCAAAGCAAA+TGG | 0.511667 | 6_3:-75514868 | None:intergenic |
| AATAATGGTGGGAATGGAAG+TGG | 0.528796 | 6_3:+75512979 | Msa0959140:CDS |
| CAAACTTACCAACAGTGTAC+AGG | 0.533605 | 6_3:-75514892 | None:intergenic |
| GAAATTTGCTTTCACTGGGA+AGG | 0.539615 | 6_3:+75515160 | Msa0959140:CDS |
| CATTCCTCATAGGTCCCAAA+AGG | 0.540053 | 6_3:+75518081 | Msa0959140:CDS |
| AAACCATGGACCTCGCAAAA+GGG | 0.541259 | 6_3:-75519166 | None:intergenic |
| CGAGAAAGTGAAAATAATGG+TGG | 0.551729 | 6_3:+75512967 | Msa0959140:CDS |
| GGCAGCACAGCATTCCTCAT+AGG | 0.551773 | 6_3:+75518071 | Msa0959140:intron |
| AAGTGCAACGAAAGGACGAC+AGG | 0.565120 | 6_3:-75519468 | None:intergenic |
| CTGTACTCTGTCTAGAACAC+AGG | 0.578666 | 6_3:+75513075 | Msa0959140:CDS |
| AACCATGATCCTTGAAACCA+TGG | 0.581792 | 6_3:-75519180 | None:intergenic |
| AACTGCATTGATGATACTCT+GGG | 0.591778 | 6_3:+75519262 | Msa0959140:three_prime_UTR |
| TGGTTTGAGGAAAACAAGCA+TGG | 0.594589 | 6_3:-75515109 | None:intergenic |
| TTCTAGACAGAGTACAGTTG+CGG | 0.601865 | 6_3:-75513069 | None:intergenic |
| GAGAAAGTGAAAATAATGGT+GGG | 0.615024 | 6_3:+75512968 | Msa0959140:CDS |
| AATGGAAGTGGAAGACGAAG+AGG | 0.638493 | 6_3:+75512991 | Msa0959140:CDS |
| ACATAGTCGAAAGCACCACT+GGG | 0.645779 | 6_3:-75519523 | None:intergenic |
| GAGAAAGTGAGGGAAAACGA+TGG | 0.677040 | 6_3:+75512925 | Msa0959140:exon |
| TGGAGTAACCTGTACACTGT+TGG | 0.688579 | 6_3:+75514884 | Msa0959140:CDS |
| TTCAAATGATGAAATCCCAG+TGG | 0.763712 | 6_3:+75519508 | Msa0959140:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGAATTTTAATTAAGATA+TGG | + | chr6_3:75514052-75514071 | Msa0959140:intron | 10.0% |
| !! | AATAATAATATATACATACA+AGG | + | chr6_3:75514569-75514588 | Msa0959140:intron | 10.0% |
| !! | TTCTTAAGTAAAATTTATAT+CGG | + | chr6_3:75515038-75515057 | Msa0959140:intron | 10.0% |
| !! | AAATAATTATTGTAATTAGT+AGG | - | chr6_3:75515583-75515602 | None:intergenic | 10.0% |
| !! | AAAAATATATATTTCGTGTA+TGG | - | chr6_3:75513258-75513277 | None:intergenic | 15.0% |
| !! | AATAGAAAAAATGGATATTT+AGG | + | chr6_3:75513303-75513322 | Msa0959140:intron | 15.0% |
| !! | TTTAATTAAGATATGGTAAT+TGG | + | chr6_3:75514059-75514078 | Msa0959140:intron | 15.0% |
| !! | TTTGTAAAAAGATGAAATTA+AGG | + | chr6_3:75514272-75514291 | Msa0959140:intron | 15.0% |
| !! | GAAATTAAGGAAAAAAAATT+CGG | + | chr6_3:75514285-75514304 | Msa0959140:intron | 15.0% |
| !!! | AAATACTTTTTATATAGGTA+AGG | - | chr6_3:75515445-75515464 | None:intergenic | 15.0% |
| !!! | TTCAGAAATACTTTTTATAT+AGG | - | chr6_3:75515450-75515469 | None:intergenic | 15.0% |
| !!! | TTAAGTTTTTATAGTAAACA+TGG | - | chr6_3:75516735-75516754 | None:intergenic | 15.0% |
| !!! | ATAAAAAGCATGAATTTTTT+TGG | + | chr6_3:75517212-75517231 | Msa0959140:intron | 15.0% |
| !!! | TATCATAATAACATTTTCAA+TGG | + | chr6_3:75517621-75517640 | Msa0959140:intron | 15.0% |
| !!! | AAGAAATTGCTTAGATTTTA+AGG | - | chr6_3:75512823-75512842 | None:intergenic | 20.0% |
| !! | AACTGAGAAATTGAATATTT+AGG | + | chr6_3:75513147-75513166 | Msa0959140:intron | 20.0% |
| !! | TATTAGGATAGAAAATAACT+GGG | + | chr6_3:75513888-75513907 | Msa0959140:intron | 20.0% |
| !! | TTATTTATCTGAACATTATG+TGG | + | chr6_3:75513918-75513937 | Msa0959140:intron | 20.0% |
| !!! | TTTATTATTTTTCCTCAACT+TGG | - | chr6_3:75514000-75514019 | None:intergenic | 20.0% |
| !! | ATAGAGATTATCATTTATTG+TGG | + | chr6_3:75514140-75514159 | Msa0959140:intron | 20.0% |
| !!! | TTTAGAGTTTTGTATATTGT+TGG | + | chr6_3:75514174-75514193 | Msa0959140:intron | 20.0% |
| !! | TGATAATAATGATTTACTAG+TGG | + | chr6_3:75514231-75514250 | Msa0959140:intron | 20.0% |
| !! | GATGAATAATCACTAATTAA+TGG | + | chr6_3:75515065-75515084 | Msa0959140:intron | 20.0% |
| !!! | AAATATTTGAAATTCGTGAA+TGG | - | chr6_3:75515263-75515282 | None:intergenic | 20.0% |
| !! | CTAAAATATCTTCATATGAT+TGG | - | chr6_3:75515397-75515416 | None:intergenic | 20.0% |
| !! | TTATTGTAATTAGTAGGAAT+TGG | - | chr6_3:75515577-75515596 | None:intergenic | 20.0% |
| !!! | AGTTGACTAAATTGTTATTT+TGG | + | chr6_3:75515655-75515674 | Msa0959140:intron | 20.0% |
| !! | TCGAAAAATTATTTAGTGAA+AGG | + | chr6_3:75516284-75516303 | Msa0959140:intron | 20.0% |
| !! | CTTTCTCAAGTTAATAAATA+CGG | + | chr6_3:75516806-75516825 | Msa0959140:intron | 20.0% |
| !!! | AATATTTTACCACCAAAAAA+CGG | + | chr6_3:75517080-75517099 | Msa0959140:intron | 20.0% |
| !! | ATAAGATTATAGAAATCAGT+CGG | - | chr6_3:75517301-75517320 | None:intergenic | 20.0% |
| !!! | ATTCACTGTTTTTAATTTTC+TGG | + | chr6_3:75517753-75517772 | Msa0959140:intron | 20.0% |
| !!! | AAAACAAATATTTTTCCCTT+TGG | + | chr6_3:75517865-75517884 | Msa0959140:intron | 20.0% |
| !! | ACTATAAAAAAAAGGTTACA+TGG | - | chr6_3:75518378-75518397 | None:intergenic | 20.0% |
| !! | ACATTATACTAATTTCAGTT+CGG | - | chr6_3:75518539-75518558 | None:intergenic | 20.0% |
| !!! | TTTTAAGCTGAAACAAAATT+TGG | - | chr6_3:75518784-75518803 | None:intergenic | 20.0% |
| !!! | TATCTTTTGTTCTTTTACAA+AGG | - | chr6_3:75518858-75518877 | None:intergenic | 20.0% |
| !! | ATAATGACAATAACAAATTC+AGG | + | chr6_3:75518936-75518955 | Msa0959140:intron | 20.0% |
| !! | AAATAAAAATCTGTAATGCA+TGG | + | chr6_3:75518968-75518987 | Msa0959140:intron | 20.0% |
| !! | ATAATCATTAATGTCACATT+TGG | - | chr6_3:75519068-75519087 | None:intergenic | 20.0% |
| !! | TAAAAAATCAGAAATGCAAA+GGG | - | chr6_3:75519120-75519139 | None:intergenic | 20.0% |
| !! | TTAAAAAATCAGAAATGCAA+AGG | - | chr6_3:75519121-75519140 | None:intergenic | 20.0% |
| !!! | TTTCTGATTTTTTAATTGAC+AGG | + | chr6_3:75519126-75519145 | Msa0959140:intron | 20.0% |
| !!! | TGCTTAGATTTTAAGGAATT+GGG | - | chr6_3:75512816-75512835 | None:intergenic | 25.0% |
| !!! | TTGCTTAGATTTTAAGGAAT+TGG | - | chr6_3:75512817-75512836 | None:intergenic | 25.0% |
| ! | TACCTCATAAATATAACATG+CGG | - | chr6_3:75513478-75513497 | None:intergenic | 25.0% |
| ! | TTCAAATTACTTGAGAATTG+AGG | + | chr6_3:75513646-75513665 | Msa0959140:intron | 25.0% |
| ! | GTATTAGGATAGAAAATAAC+TGG | + | chr6_3:75513887-75513906 | Msa0959140:intron | 25.0% |
| !!! | AGATTGGTTTTATGAATTAC+AGG | + | chr6_3:75514445-75514464 | Msa0959140:intron | 25.0% |
| ! | CAAAGGAAACATAAGAATTT+AGG | + | chr6_3:75514474-75514493 | Msa0959140:intron | 25.0% |
| !!! | TTTCTAGTTTACAAGACTAA+GGG | + | chr6_3:75514935-75514954 | Msa0959140:intron | 25.0% |
| ! | ACATGATTTATTCCTTAACA+TGG | + | chr6_3:75515006-75515025 | Msa0959140:intron | 25.0% |
| ! | GAAACTAATATACCATGTTA+AGG | - | chr6_3:75515021-75515040 | None:intergenic | 25.0% |
| !!! | AACTATACTTTGTTGTTGTT+TGG | + | chr6_3:75515206-75515225 | Msa0959140:intron | 25.0% |
| ! | TACAGTCTGTAATGTAAAAT+GGG | + | chr6_3:75515306-75515325 | Msa0959140:intron | 25.0% |
| !! | AATGTAAAATGGGTGTTTTT+CGG | + | chr6_3:75515316-75515335 | Msa0959140:intron | 25.0% |
| ! | ATTAAGGACGTAATAAGTAA+TGG | - | chr6_3:75515367-75515386 | None:intergenic | 25.0% |
| ! | ATAAGCAAGTACTAACTAAA+TGG | + | chr6_3:75515515-75515534 | Msa0959140:intron | 25.0% |
| ! | TAAGCAAGTACTAACTAAAT+GGG | + | chr6_3:75515516-75515535 | Msa0959140:intron | 25.0% |
| !!! | AGATTTTTGTTGATAAGCAT+TGG | + | chr6_3:75515751-75515770 | Msa0959140:intron | 25.0% |
| ! | AAGATTATGAGTAATACTGA+TGG | + | chr6_3:75515809-75515828 | Msa0959140:intron | 25.0% |
| ! | TTGTCACAAAACAACTTTAT+AGG | + | chr6_3:75515840-75515859 | Msa0959140:intron | 25.0% |
| ! | TGTCACAAAACAACTTTATA+GGG | + | chr6_3:75515841-75515860 | Msa0959140:intron | 25.0% |
| !!! | CTTTGAGATATTGTAATACA+TGG | + | chr6_3:75516058-75516077 | Msa0959140:intron | 25.0% |
| ! | TGATATGTTGTTGAAATTGA+AGG | + | chr6_3:75516162-75516181 | Msa0959140:intron | 25.0% |
| ! | ATTTAGTGAAAGGAATAACA+TGG | + | chr6_3:75516294-75516313 | Msa0959140:intron | 25.0% |
| ! | TTTAGTGAAAGGAATAACAT+GGG | + | chr6_3:75516295-75516314 | Msa0959140:intron | 25.0% |
| ! | GTATGAATGTTTGGATAAAA+TGG | - | chr6_3:75516584-75516603 | None:intergenic | 25.0% |
| !!! | ATTGATAATGAAGCTACAAA+TGG | - | chr6_3:75516610-75516629 | None:intergenic | 25.0% |
| !! | CGTATTTATTAACTTGAGAA+AGG | - | chr6_3:75516808-75516827 | None:intergenic | 25.0% |
| ! | AGTTATATGTAGAGAATTCT+AGG | + | chr6_3:75516873-75516892 | Msa0959140:intron | 25.0% |
| ! | TAAGATTATAGAAATCAGTC+GGG | - | chr6_3:75517300-75517319 | None:intergenic | 25.0% |
| !! | TAGTCTACAAAACTTTTAGA+CGG | + | chr6_3:75517493-75517512 | Msa0959140:intron | 25.0% |
| !!! | TTTTTAGTATACACTTTTCC+AGG | + | chr6_3:75517667-75517686 | Msa0959140:intron | 25.0% |
| ! | ACCAGATTAAAAAAACGTTA+AGG | - | chr6_3:75517695-75517714 | None:intergenic | 25.0% |
| !!! | TTTTTAATTTTCTGGATGAG+TGG | + | chr6_3:75517761-75517780 | Msa0959140:intron | 25.0% |
| !! | ATTTAAAATGTCACAAGTGT+AGG | - | chr6_3:75517946-75517965 | None:intergenic | 25.0% |
| ! | AGATAAATAATCCACAAAGT+TGG | - | chr6_3:75517991-75518010 | None:intergenic | 25.0% |
| !!! | CTGAAGGTACTATAAAAAAA+AGG | - | chr6_3:75518386-75518405 | None:intergenic | 25.0% |
| ! | TAATTCTCATGAATCTAACA+AGG | + | chr6_3:75518424-75518443 | Msa0959140:intron | 25.0% |
| ! | ATGAATCTAACAAGGAAATA+AGG | + | chr6_3:75518432-75518451 | Msa0959140:intron | 25.0% |
| !!! | AGTTTTATTGCGTAATCTTA+AGG | + | chr6_3:75518678-75518697 | Msa0959140:intron | 25.0% |
| !!! | TTTTAGGTTACTCATTCAAA+AGG | + | chr6_3:75519221-75519240 | Msa0959140:exon | 25.0% |
| !! | AATAAAAAAAGTGCAACGAA+AGG | - | chr6_3:75519479-75519498 | None:intergenic | 25.0% |
| !! | GATTTTAAGGAATTGGGTTT+GGG | - | chr6_3:75512810-75512829 | None:intergenic | 30.0% |
| !! | AGATTTTAAGGAATTGGGTT+TGG | - | chr6_3:75512811-75512830 | None:intergenic | 30.0% |
| ACTATGGATCTGTGATTTAT+AGG | - | chr6_3:75512877-75512896 | None:intergenic | 30.0% | |
| AAGAAAGAGAGAAGAAACTA+TGG | - | chr6_3:75512893-75512912 | None:intergenic | 30.0% | |
| ! | CATTATTTTCACTTTCTCGA+AGG | - | chr6_3:75512966-75512985 | None:intergenic | 30.0% |
| CTTCGAGAAAGTGAAAATAA+TGG | + | chr6_3:75512964-75512983 | Msa0959140:CDS | 30.0% | |
| GAGAAAGTGAAAATAATGGT+GGG | + | chr6_3:75512968-75512987 | Msa0959140:CDS | 30.0% | |
| CGCACTCATAATAGAAAAAA+TGG | + | chr6_3:75513294-75513313 | Msa0959140:intron | 30.0% | |
| !!! | TTTAGGTTTTGATTTGAGCA+TGG | + | chr6_3:75513320-75513339 | Msa0959140:intron | 30.0% |
| CTAACTCAAATTATTCTCCT+CGG | - | chr6_3:75513441-75513460 | None:intergenic | 30.0% | |
| TGTAATGAACAAAACTGTGA+CGG | - | chr6_3:75513528-75513547 | None:intergenic | 30.0% | |
| CAAGAGATGTAAGTTGTATT+AGG | + | chr6_3:75513872-75513891 | Msa0959140:intron | 30.0% | |
| ACTTGGTATTGTATATCTGA+AGG | - | chr6_3:75513983-75514002 | None:intergenic | 30.0% | |
| AGATATACAATACCAAGTTG+AGG | + | chr6_3:75513985-75514004 | Msa0959140:intron | 30.0% | |
| !! | AGATAACTTATGCTGACTTT+AGG | + | chr6_3:75514201-75514220 | Msa0959140:intron | 30.0% |
| TGAATTACAGGATGAAACAA+AGG | + | chr6_3:75514457-75514476 | Msa0959140:intron | 30.0% | |
| !! | AGCATAATTTTTGTCACTTG+AGG | + | chr6_3:75514498-75514517 | Msa0959140:intron | 30.0% |
| ATTTGTCACCAGAGATTATA+TGG | + | chr6_3:75514840-75514859 | Msa0959140:intron | 30.0% | |
| !! | CTTAGTCTTGTAAACTAGAA+AGG | - | chr6_3:75514936-75514955 | None:intergenic | 30.0% |
| !! | CTTTCTAGTTTACAAGACTA+AGG | + | chr6_3:75514934-75514953 | Msa0959140:intron | 30.0% |
| AATGTTATCCCAAACTTGAT+TGG | - | chr6_3:75515132-75515151 | None:intergenic | 30.0% | |
| TGAAATTCGTGAATGGAAAT+TGG | - | chr6_3:75515256-75515275 | None:intergenic | 30.0% | |
| CTACAGTCTGTAATGTAAAA+TGG | + | chr6_3:75515305-75515324 | Msa0959140:intron | 30.0% | |
| !! | TATGATTGGTGTTGTGATTA+AGG | - | chr6_3:75515383-75515402 | None:intergenic | 30.0% |
| TATAGGTAAGGCAGTATTAT+AGG | - | chr6_3:75515433-75515452 | None:intergenic | 30.0% | |
| ! | ATAATCTTTTACCAGCTTGA+GGG | - | chr6_3:75515616-75515635 | None:intergenic | 30.0% |
| ATCAACAAAAATCTAGACAC+AGG | - | chr6_3:75515745-75515764 | None:intergenic | 30.0% | |
| TGTAATACATGGTATACAAC+AGG | + | chr6_3:75516069-75516088 | Msa0959140:intron | 30.0% | |
| ACCAAAAAATATGTCACGTT+TGG | + | chr6_3:75516134-75516153 | Msa0959140:intron | 30.0% | |
| !!! | ACCAAACGTGACATATTTTT+TGG | - | chr6_3:75516138-75516157 | None:intergenic | 30.0% |
| TATGTTGTTGAAATTGAAGG+CGG | + | chr6_3:75516165-75516184 | Msa0959140:intron | 30.0% | |
| AGTTTGACATGTATCTCATT+TGG | - | chr6_3:75516385-75516404 | None:intergenic | 30.0% | |
| TGAATGTTTGGATAAAATGG+TGG | - | chr6_3:75516581-75516600 | None:intergenic | 30.0% | |
| AAATGGCATGTATGAATGTT+TGG | - | chr6_3:75516593-75516612 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTAAGTCATGCTCC+TGG | - | chr6_3:75516640-75516659 | None:intergenic | 30.0% |
| ! | TTTGACAATCCATTTTGTTG+CGG | + | chr6_3:75516674-75516693 | Msa0959140:intron | 30.0% |
| TAAAAGATTACACTCTGACA+TGG | - | chr6_3:75516782-75516801 | None:intergenic | 30.0% | |
| ! | GCTGAAACTGTTGAATTTTA+TGG | + | chr6_3:75516895-75516914 | Msa0959140:intron | 30.0% |
| ! | AATTTTATGGTCTGACATAG+TGG | + | chr6_3:75516908-75516927 | Msa0959140:intron | 30.0% |
| ! | TATTTAATGCTGTTTGTAGC+CGG | - | chr6_3:75516975-75516994 | None:intergenic | 30.0% |
| AACAGCCATATAGTAAACAA+CGG | + | chr6_3:75517026-75517045 | Msa0959140:intron | 30.0% | |
| ! | TTTTGCCGTTGTTTACTATA+TGG | - | chr6_3:75517034-75517053 | None:intergenic | 30.0% |
| TTACTTCTATCTTCTTTCCT+TGG | + | chr6_3:75517334-75517353 | Msa0959140:intron | 30.0% | |
| TACTTCTATCTTCTTTCCTT+GGG | + | chr6_3:75517335-75517354 | Msa0959140:intron | 30.0% | |
| CAATAAGTTCGAGATCTAAT+AGG | + | chr6_3:75517537-75517556 | Msa0959140:intron | 30.0% | |
| GATCAAACAGGATTTGTATA+TGG | + | chr6_3:75517565-75517584 | Msa0959140:intron | 30.0% | |
| AGGATTTGTATATGGACATA+TGG | + | chr6_3:75517573-75517592 | Msa0959140:intron | 30.0% | |
| GGATTTGTATATGGACATAT+GGG | + | chr6_3:75517574-75517593 | Msa0959140:intron | 30.0% | |
| TTTCAATGGAGAATTAGAGA+TGG | + | chr6_3:75517635-75517654 | Msa0959140:intron | 30.0% | |
| !!! | GCCTTAACGTTTTTTTAATC+TGG | + | chr6_3:75517691-75517710 | Msa0959140:intron | 30.0% |
| AAACAGTGAATGAAGTTTAC+AGG | - | chr6_3:75517744-75517763 | None:intergenic | 30.0% | |
| TTCAAGCATATTGCAACAAA+GGG | - | chr6_3:75517847-75517866 | None:intergenic | 30.0% | |
| TTTCAAGCATATTGCAACAA+AGG | - | chr6_3:75517848-75517867 | None:intergenic | 30.0% | |
| AAGTGTAGGATGAAATGATA+GGG | - | chr6_3:75517932-75517951 | None:intergenic | 30.0% | |
| AAAATGCAAATCCAACTTTG+TGG | + | chr6_3:75517977-75517996 | Msa0959140:intron | 30.0% | |
| !!! | CTAAGTGTGAGTGTTTTTTA+TGG | + | chr6_3:75518050-75518069 | Msa0959140:intron | 30.0% |
| TATCATACTTGCGATGTATA+TGG | - | chr6_3:75518150-75518169 | None:intergenic | 30.0% | |
| GTGCTAATTCAATTTACACT+AGG | - | chr6_3:75518475-75518494 | None:intergenic | 30.0% | |
| ! | GCCATATAGCATTTTTCTTA+GGG | - | chr6_3:75518503-75518522 | None:intergenic | 30.0% |
| TTTATTGCGTAATCTTAAGG+AGG | + | chr6_3:75518681-75518700 | Msa0959140:intron | 30.0% | |
| TTATTGCGTAATCTTAAGGA+GGG | + | chr6_3:75518682-75518701 | Msa0959140:intron | 30.0% | |
| GATAGTTCAAATCTTCTTGA+CGG | + | chr6_3:75518704-75518723 | Msa0959140:intron | 30.0% | |
| ! | TATCATATTTTATGCTGGAG+TGG | - | chr6_3:75519019-75519038 | None:intergenic | 30.0% |
| ! | AGACGTATCATATTTTATGC+TGG | - | chr6_3:75519024-75519043 | None:intergenic | 30.0% |
| ! | ATGCTTTGACACAGAATTTT+AGG | + | chr6_3:75519205-75519224 | Msa0959140:CDS | 30.0% |
| GACTGTCACAAAAATACAAA+TGG | + | chr6_3:75519307-75519326 | Msa0959140:three_prime_UTR | 30.0% | |
| GTCACAAAAATACAAATGGA+TGG | + | chr6_3:75519311-75519330 | Msa0959140:three_prime_UTR | 30.0% | |
| ACAGATTCCAAAAAAGAAAG+GGG | - | chr6_3:75519358-75519377 | None:intergenic | 30.0% | |
| GACAGATTCCAAAAAAGAAA+GGG | - | chr6_3:75519359-75519378 | None:intergenic | 30.0% | |
| AGACAGATTCCAAAAAAGAA+AGG | - | chr6_3:75519360-75519379 | None:intergenic | 30.0% | |
| !!! | TTCTTTTTTGGAATCTGTCT+AGG | + | chr6_3:75519360-75519379 | Msa0959140:three_prime_UTR | 30.0% |
| ! | TCATTTTCTCGAGAAAGTGA+GGG | + | chr6_3:75512915-75512934 | Msa0959140:five_prime_UTR | 35.0% |
| CGAGAAAGTGAAAATAATGG+TGG | + | chr6_3:75512967-75512986 | Msa0959140:CDS | 35.0% | |
| ! | AGTGAAAATAATGGTGGGAA+TGG | + | chr6_3:75512973-75512992 | Msa0959140:CDS | 35.0% |
| GACCGCATGTTATATTTATG+AGG | + | chr6_3:75513473-75513492 | Msa0959140:intron | 35.0% | |
| ! | TTTTGCACAAAACCCTAAAG+CGG | - | chr6_3:75513505-75513524 | None:intergenic | 35.0% |
| ATTACACAAGACATCGTCTT+TGG | + | chr6_3:75513542-75513561 | Msa0959140:intron | 35.0% | |
| AAGGTTTCGTCCTTTGTAAA+AGG | - | chr6_3:75513687-75513706 | None:intergenic | 35.0% | |
| TTACAAAGGACGAAACCTTA+AGG | + | chr6_3:75513688-75513707 | Msa0959140:intron | 35.0% | |
| TACAAAGGACGAAACCTTAA+GGG | + | chr6_3:75513689-75513708 | Msa0959140:intron | 35.0% | |
| TGAACATTATGTGGAATCTG+AGG | + | chr6_3:75513927-75513946 | Msa0959140:intron | 35.0% | |
| TAGAAAACCAACACTCATGA+GGG | - | chr6_3:75514030-75514049 | None:intergenic | 35.0% | |
| TTAGAAAACCAACACTCATG+AGG | - | chr6_3:75514031-75514050 | None:intergenic | 35.0% | |
| !! | ATTGGTAACGTTTGTCTTCT+CGG | + | chr6_3:75514077-75514096 | Msa0959140:intron | 35.0% |
| ATTCGGAATACGAAATGAAC+TGG | + | chr6_3:75514302-75514321 | Msa0959140:intron | 35.0% | |
| GACTAGGAATCTTTATGAAC+TGG | + | chr6_3:75514347-75514366 | Msa0959140:intron | 35.0% | |
| AACTGGATTAATCGAGAATG+TGG | + | chr6_3:75514364-75514383 | Msa0959140:intron | 35.0% | |
| CAAAATACGATCCTCCAAAT+AGG | - | chr6_3:75514390-75514409 | None:intergenic | 35.0% | |
| ! | ATTTGGAGGATCGTATTTTG+AGG | + | chr6_3:75514390-75514409 | Msa0959140:intron | 35.0% |
| GTAAGGAATAAAACTTGAGG+AGG | - | chr6_3:75514723-75514742 | None:intergenic | 35.0% | |
| TGGCAAAACCATATAATCTC+TGG | - | chr6_3:75514851-75514870 | None:intergenic | 35.0% | |
| CTAGCACATTTACATGACAA+AGG | - | chr6_3:75514984-75515003 | None:intergenic | 35.0% | |
| CTTTGTCATGTAAATGTGCT+AGG | + | chr6_3:75514982-75515001 | Msa0959140:intron | 35.0% | |
| TTCCTCAAACCAATCAAGTT+TGG | + | chr6_3:75515120-75515139 | Msa0959140:CDS | 35.0% | |
| TCCTCAAACCAATCAAGTTT+GGG | + | chr6_3:75515121-75515140 | Msa0959140:CDS | 35.0% | |
| ! | TTTGGGATAACATTCACTCT+TGG | + | chr6_3:75515138-75515157 | Msa0959140:CDS | 35.0% |
| ! | TCTTGGAAATTTGCTTTCAC+TGG | + | chr6_3:75515155-75515174 | Msa0959140:CDS | 35.0% |
| ! | CTTGGAAATTTGCTTTCACT+GGG | + | chr6_3:75515156-75515175 | Msa0959140:CDS | 35.0% |
| !! | TAAAATGGGTGTTTTTCGGT+AGG | + | chr6_3:75515320-75515339 | Msa0959140:intron | 35.0% |
| !! | AAAATGGGTGTTTTTCGGTA+GGG | + | chr6_3:75515321-75515340 | Msa0959140:intron | 35.0% |
| ! | TAATCTTTTACCAGCTTGAG+GGG | - | chr6_3:75515615-75515634 | None:intergenic | 35.0% |
| ! | GATAATCTTTTACCAGCTTG+AGG | - | chr6_3:75515617-75515636 | None:intergenic | 35.0% |
| !! | GTTGTTTTGTGACAACAGAT+TGG | - | chr6_3:75515835-75515854 | None:intergenic | 35.0% |
| ! | AGTTTAGAGCTATAACACGA+GGG | - | chr6_3:75515919-75515938 | None:intergenic | 35.0% |
| ! | AAGTTTAGAGCTATAACACG+AGG | - | chr6_3:75515920-75515939 | None:intergenic | 35.0% |
| !! | TTATAGCTCTAAACTTTGCC+TGG | + | chr6_3:75515924-75515943 | Msa0959140:intron | 35.0% |
| AATATCTCAAAGTTGCTCCA+GGG | - | chr6_3:75516050-75516069 | None:intergenic | 35.0% | |
| AAAATATGTCACGTTTGGTC+TGG | + | chr6_3:75516139-75516158 | Msa0959140:intron | 35.0% | |
| ATGTTGTTGAAATTGAAGGC+GGG | + | chr6_3:75516166-75516185 | Msa0959140:intron | 35.0% | |
| TTCAACTAACCTCCATACAA+AGG | + | chr6_3:75516191-75516210 | Msa0959140:intron | 35.0% | |
| ! | GTGGCATTGAAGTTTAATCA+TGG | + | chr6_3:75516216-75516235 | Msa0959140:intron | 35.0% |
| TGAAAGGAATAACATGGGTT+TGG | + | chr6_3:75516300-75516319 | Msa0959140:intron | 35.0% | |
| !!! | TCTGTTTGCTCCTTTTTCAA+AGG | + | chr6_3:75516339-75516358 | Msa0959140:intron | 35.0% |
| ! | AAATGGAGTGCCTTTGAAAA+AGG | - | chr6_3:75516352-75516371 | None:intergenic | 35.0% |
| CATGTATCTCATTTGGTTGT+GGG | - | chr6_3:75516378-75516397 | None:intergenic | 35.0% | |
| ACATGTATCTCATTTGGTTG+TGG | - | chr6_3:75516379-75516398 | None:intergenic | 35.0% | |
| AAACTAAAACTCCAACAGAG+TGG | - | chr6_3:75516465-75516484 | None:intergenic | 35.0% | |
| !!! | TTCAAAGGGGTTCGATTTTT+TGG | - | chr6_3:75516514-75516533 | None:intergenic | 35.0% |
| TCCAGCTTAAGGATTTCAAA+GGG | - | chr6_3:75516528-75516547 | None:intergenic | 35.0% | |
| TTCCAGCTTAAGGATTTCAA+AGG | - | chr6_3:75516529-75516548 | None:intergenic | 35.0% | |
| ! | CAAGATTGATTTCCAGCTTA+AGG | - | chr6_3:75516539-75516558 | None:intergenic | 35.0% |
| GTGGAAGATATGGAATAAAG+AGG | - | chr6_3:75516562-75516581 | None:intergenic | 35.0% | |
| ! | GGATAAAATGGTGGAAGATA+TGG | - | chr6_3:75516572-75516591 | None:intergenic | 35.0% |
| TCATTATCAATAGCGAATCC+AGG | + | chr6_3:75516619-75516638 | Msa0959140:intron | 35.0% | |
| ! | TTGACAATCCATTTTGTTGC+GGG | + | chr6_3:75516675-75516694 | Msa0959140:intron | 35.0% |
| GTTAATAAATACGGTGAGCA+CGG | + | chr6_3:75516815-75516834 | Msa0959140:intron | 35.0% | |
| TATTGAGCAAGATGTTGTTG+CGG | - | chr6_3:75516941-75516960 | None:intergenic | 35.0% | |
| GCTCAATAAACTGCAAAAAC+CGG | + | chr6_3:75516953-75516972 | Msa0959140:intron | 35.0% | |
| ATTATTGTGTTGCAGGAATG+AGG | - | chr6_3:75517000-75517019 | None:intergenic | 35.0% | |
| ! | TTGTGCTATTATTGTGTTGC+AGG | - | chr6_3:75517007-75517026 | None:intergenic | 35.0% |
| GGCAAAAACACTCACAAAAA+AGG | + | chr6_3:75517047-75517066 | Msa0959140:intron | 35.0% | |
| ! | ATTTTACCACCAAAAAACGG+TGG | + | chr6_3:75517083-75517102 | Msa0959140:intron | 35.0% |
| CCTTTACGAATACAAGACAT+CGG | - | chr6_3:75517388-75517407 | None:intergenic | 35.0% | |
| GGTTATCATTGAGATATGCA+CGG | + | chr6_3:75517406-75517425 | Msa0959140:intron | 35.0% | |
| !! | TAATAGGTGTTGGATCAAAC+AGG | + | chr6_3:75517553-75517572 | Msa0959140:intron | 35.0% |
| AATTCATTCAGAACCATGTG+TGG | - | chr6_3:75517602-75517621 | None:intergenic | 35.0% | |
| TAAAAAAACGTTAAGGCTCC+TGG | - | chr6_3:75517688-75517707 | None:intergenic | 35.0% | |
| AAGTTTACAGGTAGAGATGA+AGG | - | chr6_3:75517732-75517751 | None:intergenic | 35.0% | |
| AGATTGTCTGCTGTAAAAAC+TGG | + | chr6_3:75517894-75517913 | Msa0959140:intron | 35.0% | |
| CAAGTGTAGGATGAAATGAT+AGG | - | chr6_3:75517933-75517952 | None:intergenic | 35.0% | |
| ! | ATCATCGATACTTGCCTTTT+GGG | - | chr6_3:75518098-75518117 | None:intergenic | 35.0% |
| GACATTTCTTGCGATTATCT+TGG | + | chr6_3:75518306-75518325 | Msa0959140:CDS | 35.0% | |
| AAGGTTACATGGAATGCATT+TGG | - | chr6_3:75518367-75518386 | None:intergenic | 35.0% | |
| GTATGCTTACATTACACTGA+AGG | - | chr6_3:75518402-75518421 | None:intergenic | 35.0% | |
| ! | AAATAAGGAGTATGCTACGT+GGG | + | chr6_3:75518447-75518466 | Msa0959140:intron | 35.0% |
| GCCCTAAGAAAAATGCTATA+TGG | + | chr6_3:75518499-75518518 | Msa0959140:intron | 35.0% | |
| ! | GGCCATATAGCATTTTTCTT+AGG | - | chr6_3:75518504-75518523 | None:intergenic | 35.0% |
| TTGTTAAGTACTCACAGTCA+AGG | + | chr6_3:75518575-75518594 | Msa0959140:intron | 35.0% | |
| ! | TTCTTGACGGACGATTTAAA+AGG | + | chr6_3:75518717-75518736 | Msa0959140:intron | 35.0% |
| GCTGAAACAAAATTTGGAGA+AGG | - | chr6_3:75518778-75518797 | None:intergenic | 35.0% | |
| ! | CAAAGGCTTTATACAAGTGA+AGG | - | chr6_3:75518841-75518860 | None:intergenic | 35.0% |
| TTAGAACATTGTACAAGGAG+TGG | - | chr6_3:75519093-75519112 | None:intergenic | 35.0% | |
| GAGAGTTAGAACATTGTACA+AGG | - | chr6_3:75519098-75519117 | None:intergenic | 35.0% | |
| ! | AACTGCATTGATGATACTCT+GGG | + | chr6_3:75519262-75519281 | Msa0959140:three_prime_UTR | 35.0% |
| ! | TTTTGTGACAGTCTTTCTTC+AGG | - | chr6_3:75519300-75519319 | None:intergenic | 35.0% |
| ! | CTGTCTAGGTTCTTTTTGTT+TGG | + | chr6_3:75519374-75519393 | Msa0959140:three_prime_UTR | 35.0% |
| TTCAAATGATGAAATCCCAG+TGG | + | chr6_3:75519508-75519527 | Msa0959140:three_prime_UTR | 35.0% | |
| ! | CTTTCGACTATGTCTGAAAT+AGG | + | chr6_3:75519533-75519552 | Msa0959140:three_prime_UTR | 35.0% |
| ! | CTCATTTTCTCGAGAAAGTG+AGG | + | chr6_3:75512914-75512933 | Msa0959140:five_prime_UTR | 40.0% |
| ! | AATAATGGTGGGAATGGAAG+TGG | + | chr6_3:75512979-75512998 | Msa0959140:CDS | 40.0% |
| TTCTAGACAGAGTACAGTTG+CGG | - | chr6_3:75513072-75513091 | None:intergenic | 40.0% | |
| TCTTTGACACTGTGATATGC+TGG | + | chr6_3:75513344-75513363 | Msa0959140:intron | 40.0% | |
| !! | TATGAGGTATTGTCCGCTTT+AGG | + | chr6_3:75513489-75513508 | Msa0959140:intron | 40.0% |
| !! | ATGAGGTATTGTCCGCTTTA+GGG | + | chr6_3:75513490-75513509 | Msa0959140:intron | 40.0% |
| TTGAGAATTGAGGCTACTCA+TGG | + | chr6_3:75513656-75513675 | Msa0959140:intron | 40.0% | |
| TGGACACTATCTTGGAAATG+TGG | + | chr6_3:75513732-75513751 | Msa0959140:intron | 40.0% | |
| TATCTTGGAAATGTGGCTAG+AGG | + | chr6_3:75513739-75513758 | Msa0959140:intron | 40.0% | |
| TTCAGATTGACGATGTCTAC+GGG | - | chr6_3:75513820-75513839 | None:intergenic | 40.0% | |
| CTTCAGATTGACGATGTCTA+CGG | - | chr6_3:75513821-75513840 | None:intergenic | 40.0% | |
| ! | ACATCGTCAATCTGAAGTGT+CGG | + | chr6_3:75513824-75513843 | Msa0959140:intron | 40.0% |
| AGAAAACCAACACTCATGAG+GGG | - | chr6_3:75514029-75514048 | None:intergenic | 40.0% | |
| !! | TTGGTAACGTTTGTCTTCTC+GGG | + | chr6_3:75514078-75514097 | Msa0959140:intron | 40.0% |
| TCTTCTCGGGTGATATCATA+TGG | + | chr6_3:75514091-75514110 | Msa0959140:intron | 40.0% | |
| CTTCTCGGGTGATATCATAT+GGG | + | chr6_3:75514092-75514111 | Msa0959140:intron | 40.0% | |
| TACGAAATGAACTGGATGAG+TGG | + | chr6_3:75514310-75514329 | Msa0959140:intron | 40.0% | |
| GGAGTACATTTCATACGACT+AGG | + | chr6_3:75514331-75514350 | Msa0959140:intron | 40.0% | |
| AATCGAGAATGTGGCCTATT+TGG | + | chr6_3:75514373-75514392 | Msa0959140:intron | 40.0% | |
| TAACACCAGCATGTTTGCTT+TGG | - | chr6_3:75514426-75514445 | None:intergenic | 40.0% | |
| ! | CAAACATGCTGGTGTTAGAT+TGG | + | chr6_3:75514429-75514448 | Msa0959140:intron | 40.0% |
| ACCCTAATCAACTGCTTTAG+CGG | - | chr6_3:75514624-75514643 | None:intergenic | 40.0% | |
| CGCGTAAGGAATAAAACTTG+AGG | - | chr6_3:75514726-75514745 | None:intergenic | 40.0% | |
| CAAACTTACCAACAGTGTAC+AGG | - | chr6_3:75514895-75514914 | None:intergenic | 40.0% | |
| ! | AACAAGCATGGACTGTAAGA+TGG | - | chr6_3:75515100-75515119 | None:intergenic | 40.0% |
| TGGTTTGAGGAAAACAAGCA+TGG | - | chr6_3:75515112-75515131 | None:intergenic | 40.0% | |
| !! | TCCCAAACTTGATTGGTTTG+AGG | - | chr6_3:75515125-75515144 | None:intergenic | 40.0% |
| ! | GAAATTTGCTTTCACTGGGA+AGG | + | chr6_3:75515160-75515179 | Msa0959140:CDS | 40.0% |
| !! | AAATGGGTGTTTTTCGGTAG+GGG | + | chr6_3:75515322-75515341 | Msa0959140:intron | 40.0% |
| TAATGGAACAATATCCCACC+TGG | - | chr6_3:75515350-75515369 | None:intergenic | 40.0% | |
| ! | AATCTTTTACCAGCTTGAGG+GGG | - | chr6_3:75515614-75515633 | None:intergenic | 40.0% |
| GAGGGATATGTGAGTTATTG+TGG | - | chr6_3:75515901-75515920 | None:intergenic | 40.0% | |
| TAGTCTCTCAAACTATGACC+AGG | - | chr6_3:75515945-75515964 | None:intergenic | 40.0% | |
| ACAACCTGCATAATAGGCTT+CGG | + | chr6_3:75515975-75515994 | Msa0959140:intron | 40.0% | |
| CAATATCTCAAAGTTGCTCC+AGG | - | chr6_3:75516051-75516070 | None:intergenic | 40.0% | |
| AACTAACCTCCATACAAAGG+TGG | + | chr6_3:75516194-75516213 | Msa0959140:intron | 40.0% | |
| AATAGAACATGGCGGCATAA+CGG | + | chr6_3:75516254-75516273 | Msa0959140:intron | 40.0% | |
| TGGACATCAAGAATTGCTGT+GGG | - | chr6_3:75516425-75516444 | None:intergenic | 40.0% | |
| ATGGACATCAAGAATTGCTG+TGG | - | chr6_3:75516426-75516445 | None:intergenic | 40.0% | |
| !! | ACAGAGTGGTGGATTACTTA+CGG | - | chr6_3:75516451-75516470 | None:intergenic | 40.0% |
| TAAGTAATCCACCACTCTGT+TGG | + | chr6_3:75516451-75516470 | Msa0959140:intron | 40.0% | |
| CCAGCTTAAGGATTTCAAAG+GGG | - | chr6_3:75516527-75516546 | None:intergenic | 40.0% | |
| ! | TGACAATCCATTTTGTTGCG+GGG | + | chr6_3:75516676-75516695 | Msa0959140:intron | 40.0% |
| ATTCAACCCATTACCAGCAT+GGG | - | chr6_3:75517159-75517178 | None:intergenic | 40.0% | |
| TATTCAACCCATTACCAGCA+TGG | - | chr6_3:75517160-75517179 | None:intergenic | 40.0% | |
| TTCTATCTTCTTTCCTTGGG+TGG | + | chr6_3:75517338-75517357 | Msa0959140:intron | 40.0% | |
| TCTATCTTCTTTCCTTGGGT+GGG | + | chr6_3:75517339-75517358 | Msa0959140:intron | 40.0% | |
| CCGATGTCTTGTATTCGTAA+AGG | + | chr6_3:75517385-75517404 | Msa0959140:intron | 40.0% | |
| GTTCGAGATCTAATAGGTGT+TGG | + | chr6_3:75517543-75517562 | Msa0959140:intron | 40.0% | |
| CAATAGCCAGATCAATCAGT+GGG | + | chr6_3:75517792-75517811 | Msa0959140:intron | 40.0% | |
| AATAGCCAGATCAATCAGTG+GGG | + | chr6_3:75517793-75517812 | Msa0959140:intron | 40.0% | |
| AGACAATCTGTCTCACCAAA+GGG | - | chr6_3:75517883-75517902 | None:intergenic | 40.0% | |
| ! | CATCATCGATACTTGCCTTT+TGG | - | chr6_3:75518099-75518118 | None:intergenic | 40.0% |
| GCTGTTGCATAAATACGAAC+AGG | - | chr6_3:75518128-75518147 | None:intergenic | 40.0% | |
| CTTGCGATTATCTTGGAGTT+TGG | + | chr6_3:75518313-75518332 | Msa0959140:CDS | 40.0% | |
| ! | GAAATAAGGAGTATGCTACG+TGG | + | chr6_3:75518446-75518465 | Msa0959140:intron | 40.0% |
| AAAATGCTATATGGCCAGCA+TGG | + | chr6_3:75518508-75518527 | Msa0959140:intron | 40.0% | |
| ACTTAAACATGTCTGCTCAG+TGG | + | chr6_3:75518651-75518670 | Msa0959140:intron | 40.0% | |
| AACCATGATCCTTGAAACCA+TGG | - | chr6_3:75519183-75519202 | None:intergenic | 40.0% | |
| ! | GAACTGCATTGATGATACTC+TGG | + | chr6_3:75519261-75519280 | Msa0959140:three_prime_UTR | 40.0% |
| ATTCCAAAAAAGAAAGGGGC+TGG | - | chr6_3:75519354-75519373 | None:intergenic | 40.0% | |
| GAGAAAGTGAGGGAAAACGA+TGG | + | chr6_3:75512925-75512944 | Msa0959140:exon | 45.0% | |
| AATGGAAGTGGAAGACGAAG+AGG | + | chr6_3:75512991-75513010 | Msa0959140:CDS | 45.0% | |
| CGAAAGCTCTTTCGCTTTCA+TGG | + | chr6_3:75513036-75513055 | Msa0959140:CDS | 45.0% | |
| ! | CTGTACTCTGTCTAGAACAC+AGG | + | chr6_3:75513075-75513094 | Msa0959140:CDS | 45.0% |
| ! | AGACATCGTCTTTGGAAACG+AGG | + | chr6_3:75513550-75513569 | Msa0959140:intron | 45.0% |
| ! | GACATCGTCTTTGGAAACGA+GGG | + | chr6_3:75513551-75513570 | Msa0959140:intron | 45.0% |
| AAGCTACGCAATAGACCCTT+TGG | + | chr6_3:75513577-75513596 | Msa0959140:intron | 45.0% | |
| AGAATTGAGGCTACTCATGG+AGG | + | chr6_3:75513659-75513678 | Msa0959140:intron | 45.0% | |
| !!! | CATGGAGGTGCCTTTTACAA+AGG | + | chr6_3:75513674-75513693 | Msa0959140:intron | 45.0% |
| CTTTGCGCAAAACCACAAAG+TGG | + | chr6_3:75513712-75513731 | Msa0959140:intron | 45.0% | |
| CCAAGATAGTGTCCACTTTG+TGG | - | chr6_3:75513727-75513746 | None:intergenic | 45.0% | |
| CCACAAAGTGGACACTATCT+TGG | + | chr6_3:75513724-75513743 | Msa0959140:intron | 45.0% | |
| TTGGAAATGTGGCTAGAGGT+CGG | + | chr6_3:75513743-75513762 | Msa0959140:intron | 45.0% | |
| TCAGATTGACGATGTCTACG+GGG | - | chr6_3:75513819-75513838 | None:intergenic | 45.0% | |
| GAGAACCAAAGCAAACATGC+TGG | + | chr6_3:75514418-75514437 | Msa0959140:intron | 45.0% | |
| TCCCGCTAAAGCAGTTGATT+AGG | + | chr6_3:75514619-75514638 | Msa0959140:intron | 45.0% | |
| CCCTAATCAACTGCTTTAGC+GGG | - | chr6_3:75514623-75514642 | None:intergenic | 45.0% | |
| CCCGCTAAAGCAGTTGATTA+GGG | + | chr6_3:75514620-75514639 | Msa0959140:intron | 45.0% | |
| AGATGACTGAAGTTCGCGTA+AGG | - | chr6_3:75514740-75514759 | None:intergenic | 45.0% | |
| ! | TTTGCCATTTGCTTTGCTGC+TGG | + | chr6_3:75514864-75514883 | Msa0959140:CDS | 45.0% |
| TACTCCAGCAGCAAAGCAAA+TGG | - | chr6_3:75514871-75514890 | None:intergenic | 45.0% | |
| TGGAGTAACCTGTACACTGT+TGG | + | chr6_3:75514884-75514903 | Msa0959140:CDS | 45.0% | |
| ! | AGCATGGACTGTAAGATGGT+AGG | - | chr6_3:75515096-75515115 | None:intergenic | 45.0% |
| TAAATGGGCCAGTGTCAACT+GGG | + | chr6_3:75515531-75515550 | Msa0959140:intron | 45.0% | |
| TCCTGCACAACCTGCATAAT+AGG | + | chr6_3:75515969-75515988 | Msa0959140:intron | 45.0% | |
| TATGCCGAAGCCTATTATGC+AGG | - | chr6_3:75515982-75516001 | None:intergenic | 45.0% | |
| TAACCTCCATACAAAGGTGG+TGG | + | chr6_3:75516197-75516216 | Msa0959140:intron | 45.0% | |
| TCAATGCCACCACCTTTGTA+TGG | - | chr6_3:75516206-75516225 | None:intergenic | 45.0% | |
| CACGAAGGAATAGAACATGG+CGG | + | chr6_3:75516246-75516265 | Msa0959140:intron | 45.0% | |
| GTATCTCATTTGGTTGTGGG+CGG | - | chr6_3:75516375-75516394 | None:intergenic | 45.0% | |
| !! | TGGTGGATTACTTACGGAGA+TGG | - | chr6_3:75516445-75516464 | None:intergenic | 45.0% |
| CTAAAACTCCAACAGAGTGG+TGG | - | chr6_3:75516462-75516481 | None:intergenic | 45.0% | |
| !! | CCCCTTTGAAATCCTTAAGC+TGG | + | chr6_3:75516524-75516543 | Msa0959140:intron | 45.0% |
| !!! | TCTTCTCCACCGTTTTTTGG+TGG | - | chr6_3:75517092-75517111 | None:intergenic | 45.0% |
| ACCAAAAAACGGTGGAGAAG+AGG | + | chr6_3:75517091-75517110 | Msa0959140:intron | 45.0% | |
| AACAGTTCCTCAAACAGGAC+TGG | - | chr6_3:75517262-75517281 | None:intergenic | 45.0% | |
| AGTCCTGTTTGAGGAACTGT+TGG | + | chr6_3:75517261-75517280 | Msa0959140:intron | 45.0% | |
| GTCCTGTTTGAGGAACTGTT+GGG | + | chr6_3:75517262-75517281 | Msa0959140:intron | 45.0% | |
| CTATCTTCTTTCCTTGGGTG+GGG | + | chr6_3:75517340-75517359 | Msa0959140:intron | 45.0% | |
| ! | TTTTAATCTGGTCCTCTCCC+TGG | + | chr6_3:75517703-75517722 | Msa0959140:intron | 45.0% |
| TTGATCTGGCTATTGCATGC+TGG | - | chr6_3:75517787-75517806 | None:intergenic | 45.0% | |
| GCAATAGCCAGATCAATCAG+TGG | + | chr6_3:75517791-75517810 | Msa0959140:intron | 45.0% | |
| CAGACAATCTGTCTCACCAA+AGG | - | chr6_3:75517884-75517903 | None:intergenic | 45.0% | |
| CATTCCTCATAGGTCCCAAA+AGG | + | chr6_3:75518081-75518100 | Msa0959140:CDS | 45.0% | |
| ! | TGGAGTTTGGAGCACTAGTT+TGG | + | chr6_3:75518326-75518345 | Msa0959140:CDS | 45.0% |
| AAACCATGGACCTCGCAAAA+GGG | - | chr6_3:75519169-75519188 | None:intergenic | 45.0% | |
| GTCCATGGTTTCAAGGATCA+TGG | + | chr6_3:75519178-75519197 | Msa0959140:CDS | 45.0% | |
| ! | AAAAAAGAAAGGGGCTGGCA+AGG | - | chr6_3:75519349-75519368 | None:intergenic | 45.0% |
| !!! | TTGCCAGCCCCTTTCTTTTT+TGG | + | chr6_3:75519348-75519367 | Msa0959140:three_prime_UTR | 45.0% |
| !! | ACATAGTCGAAAGCACCACT+GGG | - | chr6_3:75519526-75519545 | None:intergenic | 45.0% |
| !! | AAAATTATTATAAATAAAAG+TGG | - | chr6_3:75518753-75518772 | None:intergenic | 5.0% |
| CACGTACACGCATAATACCG+AGG | + | chr6_3:75513421-75513440 | Msa0959140:intron | 50.0% | |
| GTTGAGACTAAGCGGCCAAA+GGG | - | chr6_3:75513595-75513614 | None:intergenic | 50.0% | |
| AGTTGAGACTAAGCGGCCAA+AGG | - | chr6_3:75513596-75513615 | None:intergenic | 50.0% | |
| TTTGGCCGCTTAGTCTCAAC+TGG | + | chr6_3:75513595-75513614 | Msa0959140:intron | 50.0% | |
| TTGGCCGCTTAGTCTCAACT+GGG | + | chr6_3:75513596-75513615 | Msa0959140:intron | 50.0% | |
| ! | GGTTTTGCGCAAAGCCCTTA+AGG | - | chr6_3:75513706-75513725 | None:intergenic | 50.0% |
| TGGAAATGTGGCTAGAGGTC+GGG | + | chr6_3:75513744-75513763 | Msa0959140:intron | 50.0% | |
| CAGATTGACGATGTCTACGG+GGG | - | chr6_3:75513818-75513837 | None:intergenic | 50.0% | |
| CGGCGCTACATAGTGATTGT+TGG | + | chr6_3:75513844-75513863 | Msa0959140:intron | 50.0% | |
| TTTGTGCCCCTCATGAGTGT+TGG | + | chr6_3:75514020-75514039 | Msa0959140:intron | 50.0% | |
| CGAGAATGTGGCCTATTTGG+AGG | + | chr6_3:75514376-75514395 | Msa0959140:intron | 50.0% | |
| !! | TGTTTTTCGGTAGGGGTTCC+AGG | + | chr6_3:75515329-75515348 | Msa0959140:intron | 50.0% |
| CTAAATGGGCCAGTGTCAAC+TGG | + | chr6_3:75515530-75515549 | Msa0959140:intron | 50.0% | |
| GCCTATTATGCAGGTTGTGC+AGG | - | chr6_3:75515973-75515992 | None:intergenic | 50.0% | |
| AAGTGGATGCCTGACGATGA+AGG | - | chr6_3:75516007-75516026 | None:intergenic | 50.0% | |
| GGCATCCACTTCTCTTGAAC+AGG | + | chr6_3:75516016-75516035 | Msa0959140:intron | 50.0% | |
| GGACTCCTGTTCAAGAGAAG+TGG | - | chr6_3:75516024-75516043 | None:intergenic | 50.0% | |
| !! | ACAGGTCAGTGTCTAGCTCT+TGG | + | chr6_3:75516087-75516106 | Msa0959140:intron | 50.0% |
| ATGCCACCACCTTTGTATGG+AGG | - | chr6_3:75516203-75516222 | None:intergenic | 50.0% | |
| CGCCACGAAGGAATAGAACA+TGG | + | chr6_3:75516243-75516262 | Msa0959140:intron | 50.0% | |
| CGCCATGTTCTATTCCTTCG+TGG | - | chr6_3:75516248-75516267 | None:intergenic | 50.0% | |
| CATGGCGGCATAACGGTTAA+TGG | + | chr6_3:75516261-75516280 | Msa0959140:intron | 50.0% | |
| CATTTGGTTGTGGGCGGAAA+TGG | - | chr6_3:75516369-75516388 | None:intergenic | 50.0% | |
| GTTGACACCCCGCAACAAAA+TGG | - | chr6_3:75516686-75516705 | None:intergenic | 50.0% | |
| !!! | GCCTCTTCTCCACCGTTTTT+TGG | - | chr6_3:75517095-75517114 | None:intergenic | 50.0% |
| AGAAGAGGCTGACAAGCAAC+TGG | + | chr6_3:75517106-75517125 | Msa0959140:intron | 50.0% | |
| CATTACCAGCATGGGAAGCT+CGG | - | chr6_3:75517151-75517170 | None:intergenic | 50.0% | |
| GAGCTTCCCATGCTGGTAAT+GGG | + | chr6_3:75517150-75517169 | Msa0959140:intron | 50.0% | |
| GTTCCTCAAACAGGACTGGA+GGG | - | chr6_3:75517258-75517277 | None:intergenic | 50.0% | |
| AGTTCCTCAAACAGGACTGG+AGG | - | chr6_3:75517259-75517278 | None:intergenic | 50.0% | |
| CTCCCAACAGTTCCTCAAAC+AGG | - | chr6_3:75517267-75517286 | None:intergenic | 50.0% | |
| ACTGAATGTAACCCCACCCA+AGG | - | chr6_3:75517354-75517373 | None:intergenic | 50.0% | |
| AGATATGCACGGCATACTGC+AGG | + | chr6_3:75517417-75517436 | Msa0959140:intron | 50.0% | |
| GATATGCACGGCATACTGCA+GGG | + | chr6_3:75517418-75517437 | Msa0959140:intron | 50.0% | |
| !! | GGTAGAGATGAAGGCATCCA+GGG | - | chr6_3:75517723-75517742 | None:intergenic | 50.0% |
| !! | AGGTAGAGATGAAGGCATCC+AGG | - | chr6_3:75517724-75517743 | None:intergenic | 50.0% |
| !!! | CTTGCCTTTTGGGACCTATG+AGG | - | chr6_3:75518088-75518107 | None:intergenic | 50.0% |
| ! | TGCATTGATGTGCGTTGAGC+AGG | + | chr6_3:75518267-75518286 | Msa0959140:intron | 50.0% |
| ! | TGAGCTACATCCCTTTTGCG+AGG | + | chr6_3:75519156-75519175 | Msa0959140:CDS | 50.0% |
| GAAACCATGGACCTCGCAAA+AGG | - | chr6_3:75519170-75519189 | None:intergenic | 50.0% | |
| TTGCGAGGTCCATGGTTTCA+AGG | + | chr6_3:75519171-75519190 | Msa0959140:CDS | 50.0% | |
| AAGTGCAACGAAAGGACGAC+AGG | - | chr6_3:75519471-75519490 | None:intergenic | 50.0% | |
| !! | GACATAGTCGAAAGCACCAC+TGG | - | chr6_3:75519527-75519546 | None:intergenic | 50.0% |
| ! | AGAGGCACAAGCTGCTGCAT+TGG | + | chr6_3:75513009-75513028 | Msa0959140:CDS | 55.0% |
| TGGCCGCTTAGTCTCAACTG+GGG | + | chr6_3:75513597-75513616 | Msa0959140:intron | 55.0% | |
| AGCCCCCAGTTGAGACTAAG+CGG | - | chr6_3:75513603-75513622 | None:intergenic | 55.0% | |
| AAATGTGGCTAGAGGTCGGG+AGG | + | chr6_3:75513747-75513766 | Msa0959140:intron | 55.0% | |
| AATGTGGCTAGAGGTCGGGA+GGG | + | chr6_3:75513748-75513767 | Msa0959140:intron | 55.0% | |
| ! | TTTTCGGTAGGGGTTCCAGG+TGG | + | chr6_3:75515332-75515351 | Msa0959140:intron | 55.0% |
| TTTCGGTAGGGGTTCCAGGT+GGG | + | chr6_3:75515333-75515352 | Msa0959140:intron | 55.0% | |
| GTCACAGACCCAGTTGACAC+TGG | - | chr6_3:75515542-75515561 | None:intergenic | 55.0% | |
| TACAACACTCCCCCTCAAGC+TGG | + | chr6_3:75515602-75515621 | Msa0959140:intron | 55.0% | |
| CGGCATAAGCCTTCATCGTC+AGG | + | chr6_3:75515995-75516014 | Msa0959140:intron | 55.0% | |
| TTGAACAGGAGTCCTCTCCC+TGG | + | chr6_3:75516030-75516049 | Msa0959140:intron | 55.0% | |
| CTCAAAGTTGCTCCAGGGAG+AGG | - | chr6_3:75516045-75516064 | None:intergenic | 55.0% | |
| AATCATGGCAGTCGCCACGA+AGG | + | chr6_3:75516231-75516250 | Msa0959140:intron | 55.0% | |
| !! | AGCATGGGAAGCTCGGTGTT+TGG | - | chr6_3:75517144-75517163 | None:intergenic | 55.0% |
| AAACACCGAGCTTCCCATGC+TGG | + | chr6_3:75517143-75517162 | Msa0959140:intron | 55.0% | |
| CGAGCTTCCCATGCTGGTAA+TGG | + | chr6_3:75517149-75517168 | Msa0959140:intron | 55.0% | |
| ACAGGACTGGAGGGAACATG+TGG | - | chr6_3:75517249-75517268 | None:intergenic | 55.0% | |
| GTTCCCTCCAGTCCTGTTTG+AGG | + | chr6_3:75517252-75517271 | Msa0959140:intron | 55.0% | |
| GGACATATGGGCTCCACACA+TGG | + | chr6_3:75517586-75517605 | Msa0959140:intron | 55.0% | |
| !! | AGATGAAGGCATCCAGGGAG+AGG | - | chr6_3:75517718-75517737 | None:intergenic | 55.0% |
| AGCCAGATCAATCAGTGGGG+AGG | + | chr6_3:75517796-75517815 | Msa0959140:intron | 55.0% | |
| ! | TGCCTCCCCACTGATTGATC+TGG | - | chr6_3:75517801-75517820 | None:intergenic | 55.0% |
| GGCAGCACAGCATTCCTCAT+AGG | + | chr6_3:75518071-75518090 | Msa0959140:intron | 55.0% | |
| TCAGTTCGGTACTGCCATGC+TGG | - | chr6_3:75518525-75518544 | None:intergenic | 55.0% | |
| ! | CATCCCTTTTGCGAGGTCCA+TGG | + | chr6_3:75519163-75519182 | Msa0959140:CDS | 55.0% |
| GGCCGCTTAGTCTCAACTGG+GGG | + | chr6_3:75513598-75513617 | Msa0959140:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 75512729 | 75519597 | 75512729 | ID=Msa0959140;Name=Msa0959140 |
| chr6_3 | mRNA | 75512729 | 75519597 | 75512729 | ID=Msa0959140-mRNA-1;Parent=Msa0959140;Name=Msa0959140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=215|1|1|1|1|1|6|371|178 |
| chr6_3 | exon | 75512729 | 75513096 | 75512729 | ID=Msa0959140-mRNA-1:exon:13517;Parent=Msa0959140-mRNA-1 |
| chr6_3 | exon | 75514852 | 75514905 | 75514852 | ID=Msa0959140-mRNA-1:exon:13518;Parent=Msa0959140-mRNA-1 |
| chr6_3 | exon | 75515108 | 75515181 | 75515108 | ID=Msa0959140-mRNA-1:exon:13519;Parent=Msa0959140-mRNA-1 |
| chr6_3 | exon | 75518076 | 75518193 | 75518076 | ID=Msa0959140-mRNA-1:exon:13520;Parent=Msa0959140-mRNA-1 |
| chr6_3 | exon | 75518289 | 75518347 | 75518289 | ID=Msa0959140-mRNA-1:exon:13521;Parent=Msa0959140-mRNA-1 |
| chr6_3 | exon | 75519148 | 75519597 | 75519148 | ID=Msa0959140-mRNA-1:exon:13522;Parent=Msa0959140-mRNA-1 |
| chr6_3 | five_prime_UTR | 75512729 | 75512943 | 75512729 | ID=Msa0959140-mRNA-1:five_prime_utr;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75512944 | 75513096 | 75512944 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75514852 | 75514905 | 75514852 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75515108 | 75515181 | 75515108 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75518076 | 75518193 | 75518076 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75518289 | 75518347 | 75518289 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | CDS | 75519148 | 75519226 | 75519148 | ID=Msa0959140-mRNA-1:cds;Parent=Msa0959140-mRNA-1 |
| chr6_3 | three_prime_UTR | 75519227 | 75519597 | 75519227 | ID=Msa0959140-mRNA-1:three_prime_utr;Parent=Msa0959140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
