Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938210 | XP_024641790.2 | 57.778 | 675 | 238 | 10 | 10 | 657 | 16 | 670 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001780 | Msa0938210 | 0.806977 | 6.328586e-50 | -8.615850e-47 |
| Msa0017510 | Msa0938210 | 0.839279 | 1.742328e-57 | -8.615850e-47 |
| Msa0020930 | Msa0938210 | 0.801585 | 8.399626e-49 | -8.615850e-47 |
| Msa0021510 | Msa0938210 | 0.809234 | 2.092650e-50 | -8.615850e-47 |
| Msa0031340 | Msa0938210 | 0.815374 | 9.551291e-52 | -8.615850e-47 |
| Msa0032090 | Msa0938210 | 0.810289 | 1.241342e-50 | -8.615850e-47 |
| Msa0032430 | Msa0938210 | 0.825758 | 3.935653e-54 | -8.615850e-47 |
| Msa0074240 | Msa0938210 | 0.803033 | 4.228178e-49 | -8.615850e-47 |
| Msa0078900 | Msa0938210 | 0.801312 | 9.553277e-49 | -8.615850e-47 |
| Msa0079380 | Msa0938210 | 0.817473 | 3.237993e-52 | -8.615850e-47 |
| Msa0084380 | Msa0938210 | 0.813674 | 2.271139e-51 | -8.615850e-47 |
| Msa0089630 | Msa0938210 | 0.818899 | 1.540874e-52 | -8.615850e-47 |
| Msa0114060 | Msa0938210 | 0.826332 | 2.875234e-54 | -8.615850e-47 |
| Msa0616160 | Msa0938210 | 0.813731 | 2.206944e-51 | -8.615850e-47 |
| Msa0625720 | Msa0938210 | 0.805058 | 1.603583e-49 | -8.615850e-47 |
| Msa0639430 | Msa0938210 | 0.802920 | 4.462528e-49 | -8.615850e-47 |
| Msa0657970 | Msa0938210 | 0.808573 | 2.897899e-50 | -8.615850e-47 |
| Msa0661650 | Msa0938210 | 0.808459 | 3.064637e-50 | -8.615850e-47 |
| Msa0663390 | Msa0938210 | 0.812505 | 4.098721e-51 | -8.615850e-47 |
| Msa0677410 | Msa0938210 | 0.801000 | 1.107006e-48 | -8.615850e-47 |
| Msa0688480 | Msa0938210 | 0.801522 | 8.653077e-49 | -8.615850e-47 |
| Msa0691380 | Msa0938210 | 0.804708 | 1.897855e-49 | -8.615850e-47 |
| Msa0693010 | Msa0938210 | -0.808466 | 3.054926e-50 | -8.615850e-47 |
| Msa0710800 | Msa0938210 | 0.803150 | 3.998351e-49 | -8.615850e-47 |
| Msa0740510 | Msa0938210 | 0.802834 | 4.648108e-49 | -8.615850e-47 |
| Msa0741840 | Msa0938210 | 0.815559 | 8.686762e-52 | -8.615850e-47 |
| Msa0743720 | Msa0938210 | 0.804472 | 2.125082e-49 | -8.615850e-47 |
| Msa0745790 | Msa0938210 | 0.814540 | 1.462833e-51 | -8.615850e-47 |
| Msa0769920 | Msa0938210 | 0.802097 | 6.592718e-49 | -8.615850e-47 |
| Msa0777790 | Msa0938210 | 0.803168 | 3.965794e-49 | -8.615850e-47 |
| Msa0777850 | Msa0938210 | 0.818531 | 1.867020e-52 | -8.615850e-47 |
| Msa0796530 | Msa0938210 | 0.811074 | 8.398653e-51 | -8.615850e-47 |
| Msa0806790 | Msa0938210 | 0.821542 | 3.820192e-53 | -8.615850e-47 |
| Msa0820770 | Msa0938210 | 0.803582 | 3.254131e-49 | -8.615850e-47 |
| Msa0824960 | Msa0938210 | 0.806234 | 9.081623e-50 | -8.615850e-47 |
| Msa0127650 | Msa0938210 | 0.801681 | 8.028360e-49 | -8.615850e-47 |
| Msa0139060 | Msa0938210 | 0.804716 | 1.890516e-49 | -8.615850e-47 |
| Msa0157290 | Msa0938210 | 0.839327 | 1.693467e-57 | -8.615850e-47 |
| Msa0159930 | Msa0938210 | 0.813058 | 3.102217e-51 | -8.615850e-47 |
| Msa0172070 | Msa0938210 | 0.826986 | 2.007464e-54 | -8.615850e-47 |
| Msa0200260 | Msa0938210 | 0.817938 | 2.543924e-52 | -8.615850e-47 |
| Msa0211150 | Msa0938210 | 0.817732 | 2.830634e-52 | -8.615850e-47 |
| Msa0212990 | Msa0938210 | 0.820961 | 5.199679e-53 | -8.615850e-47 |
| Msa0376350 | Msa0938210 | 0.801167 | 1.023057e-48 | -8.615850e-47 |
| Msa0393080 | Msa0938210 | 0.807127 | 5.882773e-50 | -8.615850e-47 |
| Msa0397750 | Msa0938210 | 0.817226 | 3.680932e-52 | -8.615850e-47 |
| Msa0424790 | Msa0938210 | 0.809487 | 1.846576e-50 | -8.615850e-47 |
| Msa0440750 | Msa0938210 | 0.824932 | 6.175311e-54 | -8.615850e-47 |
| Msa0464380 | Msa0938210 | 0.807208 | 5.656085e-50 | -8.615850e-47 |
| Msa0464680 | Msa0938210 | 0.803584 | 3.251214e-49 | -8.615850e-47 |
| Msa0467490 | Msa0938210 | 0.802453 | 5.570770e-49 | -8.615850e-47 |
| Msa0481530 | Msa0938210 | 0.808631 | 2.816918e-50 | -8.615850e-47 |
| Msa0243100 | Msa0938210 | 0.802973 | 4.350312e-49 | -8.615850e-47 |
| Msa0244860 | Msa0938210 | 0.819870 | 9.256564e-53 | -8.615850e-47 |
| Msa0283450 | Msa0938210 | 0.824903 | 6.271706e-54 | -8.615850e-47 |
| Msa0283520 | Msa0938210 | 0.807003 | 6.250298e-50 | -8.615850e-47 |
| Msa0287650 | Msa0938210 | 0.808651 | 2.789121e-50 | -8.615850e-47 |
| Msa0291540 | Msa0938210 | 0.803480 | 3.417095e-49 | -8.615850e-47 |
| Msa0309770 | Msa0938210 | 0.828120 | 1.072338e-54 | -8.615850e-47 |
| Msa0330340 | Msa0938210 | 0.811720 | 6.077977e-51 | -8.615850e-47 |
| Msa0332000 | Msa0938210 | 0.814653 | 1.380845e-51 | -8.615850e-47 |
| Msa0340470 | Msa0938210 | 0.812044 | 5.166877e-51 | -8.615850e-47 |
| Msa0345970 | Msa0938210 | 0.830173 | 3.407997e-55 | -8.615850e-47 |
| Msa0357340 | Msa0938210 | 0.809172 | 2.158093e-50 | -8.615850e-47 |
| Msa0488560 | Msa0938210 | 0.817171 | 3.786852e-52 | -8.615850e-47 |
| Msa0492930 | Msa0938210 | 0.802967 | 4.363564e-49 | -8.615850e-47 |
| Msa0507680 | Msa0938210 | 0.818333 | 2.070654e-52 | -8.615850e-47 |
| Msa0516170 | Msa0938210 | 0.801715 | 7.900404e-49 | -8.615850e-47 |
| Msa0529890 | Msa0938210 | 0.801386 | 9.226602e-49 | -8.615850e-47 |
| Msa0545210 | Msa0938210 | 0.811134 | 8.151270e-51 | -8.615850e-47 |
| Msa0569200 | Msa0938210 | 0.805798 | 1.121582e-49 | -8.615850e-47 |
| Msa0585300 | Msa0938210 | 0.807563 | 4.754690e-50 | -8.615850e-47 |
| Msa0585560 | Msa0938210 | 0.806389 | 8.424011e-50 | -8.615850e-47 |
| Msa0602390 | Msa0938210 | 0.819518 | 1.113593e-52 | -8.615850e-47 |
| Msa0871260 | Msa0938210 | 0.858656 | 7.092772e-63 | -8.615850e-47 |
| Msa0871270 | Msa0938210 | 0.828784 | 7.415396e-55 | -8.615850e-47 |
| Msa0878500 | Msa0938210 | 0.803970 | 2.703874e-49 | -8.615850e-47 |
| Msa0880140 | Msa0938210 | 0.835105 | 2.035940e-56 | -8.615850e-47 |
| Msa0903250 | Msa0938210 | 0.807204 | 5.666519e-50 | -8.615850e-47 |
| Msa0925290 | Msa0938210 | 0.808786 | 2.610164e-50 | -8.615850e-47 |
| Msa0938210 | Msa0938220 | 0.845253 | 4.557280e-59 | -8.615850e-47 |
| Msa0938210 | Msa0947660 | 0.819241 | 1.287739e-52 | -8.615850e-47 |
| Msa0938210 | Msa0959140 | 0.808348 | 3.236444e-50 | -8.615850e-47 |
| Msa0938210 | Msa0966400 | 0.813169 | 2.933303e-51 | -8.615850e-47 |
| Msa0938210 | Msa0975330 | 0.812474 | 4.163655e-51 | -8.615850e-47 |
| Msa0938210 | Msa0975340 | 0.811331 | 7.384673e-51 | -8.615850e-47 |
| Msa0938210 | Msa0994950 | 0.813380 | 2.635676e-51 | -8.615850e-47 |
| Msa0938210 | Msa1014540 | 0.813946 | 1.978129e-51 | -8.615850e-47 |
| Msa0938210 | Msa1045200 | 0.803349 | 3.637994e-49 | -8.615850e-47 |
| Msa0938210 | Msa1081980 | 0.817942 | 2.537589e-52 | -8.615850e-47 |
| Msa0938210 | Msa1082500 | 0.807990 | 3.857691e-50 | -8.615850e-47 |
| Msa0938210 | Msa1085200 | 0.801899 | 7.242618e-49 | -8.615850e-47 |
| Msa0938210 | Msa1124960 | 0.800287 | 1.547184e-48 | -8.615850e-47 |
| Msa0938210 | Msa1140210 | 0.815727 | 7.972326e-52 | -8.615850e-47 |
| Msa0938210 | Msa1142020 | 0.810145 | 1.333524e-50 | -8.615850e-47 |
| Msa0938210 | Msa1186060 | 0.804941 | 1.695905e-49 | -8.615850e-47 |
| Msa0938210 | Msa1209460 | 0.802669 | 5.026442e-49 | -8.615850e-47 |
| Msa0938210 | Msa1228590 | 0.807497 | 4.911994e-50 | -8.615850e-47 |
| Msa0938210 | Msa1246510 | 0.807270 | 5.485941e-50 | -8.615850e-47 |
| Msa0938210 | Msa1256250 | 0.805594 | 1.237874e-49 | -8.615850e-47 |
| Msa0938210 | Msa1283860 | 0.803048 | 4.197285e-49 | -8.615850e-47 |
| Msa0938210 | Msa1296760 | 0.801775 | 7.677884e-49 | -8.615850e-47 |
| Msa0938210 | Msa1322890 | 0.808584 | 2.882049e-50 | -8.615850e-47 |
| Msa0938210 | Msa1327680 | 0.800365 | 1.491749e-48 | -8.615850e-47 |
| Msa0938210 | Msa1353980 | 0.804600 | 1.998048e-49 | -8.615850e-47 |
| Msa0938210 | Msa1398340 | 0.809091 | 2.246172e-50 | -8.615850e-47 |
| Msa0938210 | Msa1400870 | -0.801797 | 7.600568e-49 | -8.615850e-47 |
| Msa0938210 | Msa1409870 | 0.827092 | 1.893822e-54 | -8.615850e-47 |
| Msa0938210 | Msa1409880 | 0.811903 | 5.545273e-51 | -8.615850e-47 |
| Msa0938210 | Msa1411020 | 0.817265 | 3.607333e-52 | -8.615850e-47 |
| Msa0938210 | Msa1423390 | 0.801976 | 6.984093e-49 | -8.615850e-47 |
| Msa0938210 | Msa1424290 | 0.816653 | 4.950412e-52 | -8.615850e-47 |
| Msa0938210 | Msa1434350 | 0.817155 | 3.817950e-52 | -8.615850e-47 |
| Msa0938210 | Msa1438250 | 0.809442 | 1.888135e-50 | -8.615850e-47 |
| Msa0938210 | Msa1439320 | 0.816305 | 5.922071e-52 | -8.615850e-47 |
| Msa0938210 | Msa1440370 | 0.802880 | 4.547604e-49 | -8.615850e-47 |
| Msa0938210 | Msa1452240 | 0.806489 | 8.023247e-50 | -8.615850e-47 |
| Msa0938210 | Msa1464810 | 0.800827 | 1.200594e-48 | -8.615850e-47 |
| Msa0938210 | Msa1466540 | 0.807605 | 4.658137e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938210 | MtrunA17_Chr6g0454051 | 54.723 | 667 | 257 | 9 | 24 | 659 | 15 | 667 | 0.0 | 681 |
| Msa0938210 | MtrunA17_Chr6g0454041 | 55.099 | 657 | 255 | 10 | 25 | 652 | 62 | 707 | 0.0 | 672 |
| Msa0938210 | MtrunA17_Chr6g0455641 | 59.113 | 609 | 212 | 8 | 76 | 656 | 8 | 607 | 0.0 | 671 |
| Msa0938210 | MtrunA17_Chr6g0454061 | 57.049 | 610 | 232 | 7 | 75 | 656 | 2 | 609 | 0.0 | 654 |
| Msa0938210 | MtrunA17_Chr2g0302451 | 37.292 | 480 | 297 | 3 | 141 | 617 | 300 | 778 | 7.65e-104 | 336 |
| Msa0938210 | MtrunA17_Chr3g0112101 | 33.830 | 470 | 305 | 3 | 136 | 603 | 189 | 654 | 1.14e-76 | 260 |
| Msa0938210 | MtrunA17_Chr3g0126261 | 30.237 | 506 | 328 | 8 | 147 | 634 | 19 | 517 | 1.12e-73 | 248 |
| Msa0938210 | MtrunA17_Chr6g0476101 | 35.252 | 278 | 174 | 3 | 264 | 538 | 17 | 291 | 1.30e-48 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0938210 | AT3G17450.2 | 34.698 | 464 | 297 | 6 | 144 | 603 | 299 | 760 | 4.75e-94 | 310 |
| Msa0938210 | AT3G17450.1 | 34.698 | 464 | 297 | 6 | 144 | 603 | 299 | 760 | 4.75e-94 | 310 |
| Msa0938210 | AT4G15020.2 | 35.281 | 462 | 293 | 3 | 134 | 592 | 178 | 636 | 1.07e-87 | 290 |
| Msa0938210 | AT4G15020.1 | 35.281 | 462 | 293 | 3 | 134 | 592 | 178 | 636 | 1.07e-87 | 290 |
| Msa0938210 | AT3G22220.3 | 32.063 | 446 | 298 | 2 | 150 | 595 | 193 | 633 | 1.44e-77 | 263 |
| Msa0938210 | AT3G22220.4 | 32.063 | 446 | 298 | 2 | 150 | 595 | 193 | 633 | 1.44e-77 | 263 |
| Msa0938210 | AT3G22220.2 | 32.063 | 446 | 298 | 2 | 150 | 595 | 193 | 633 | 1.44e-77 | 263 |
| Msa0938210 | AT3G22220.1 | 32.063 | 446 | 298 | 2 | 150 | 595 | 193 | 633 | 1.44e-77 | 263 |
| Msa0938210 | AT1G79740.1 | 27.461 | 579 | 389 | 10 | 29 | 603 | 6 | 557 | 1.36e-71 | 244 |
| Msa0938210 | AT1G79740.4 | 27.461 | 579 | 389 | 10 | 29 | 603 | 6 | 557 | 1.36e-71 | 244 |
| Msa0938210 | AT1G79740.3 | 30.345 | 435 | 288 | 6 | 173 | 603 | 1 | 424 | 2.73e-65 | 224 |
| Msa0938210 | AT1G79740.2 | 30.345 | 435 | 288 | 6 | 173 | 603 | 1 | 424 | 2.73e-65 | 224 |
| Msa0938210 | AT3G13020.1 | 28.472 | 576 | 371 | 15 | 31 | 590 | 8 | 558 | 2.47e-62 | 218 |
| Msa0938210 | AT3G13030.3 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 1.79e-57 | 203 |
| Msa0938210 | AT3G13030.4 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 1.79e-57 | 203 |
| Msa0938210 | AT3G13030.1 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 1.79e-57 | 203 |
| Msa0938210 | AT3G13030.2 | 28.074 | 488 | 334 | 7 | 105 | 590 | 14 | 486 | 1.79e-57 | 203 |
| Msa0938210 | AT5G33406.1 | 36.431 | 269 | 167 | 3 | 352 | 617 | 2 | 269 | 4.35e-49 | 179 |
| Msa0938210 | AT3G13010.1 | 26.903 | 565 | 359 | 17 | 31 | 589 | 8 | 524 | 7.06e-47 | 175 |
| Msa0938210 | AT3G13030.5 | 25.820 | 488 | 312 | 8 | 105 | 590 | 14 | 453 | 6.24e-46 | 171 |
| Msa0938210 | AT1G43260.1 | 32.489 | 237 | 159 | 1 | 151 | 386 | 39 | 275 | 2.93e-40 | 149 |
| Msa0938210 | AT1G36095.1 | 33.537 | 164 | 109 | 0 | 257 | 420 | 135 | 298 | 8.68e-24 | 102 |
| Msa0938210 | AT5G31412.1 | 38.281 | 128 | 77 | 1 | 199 | 326 | 115 | 240 | 7.97e-21 | 96.3 |
Find 163 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTCAAATATTTACCTTTA+AGG | 0.051897 | 6_3:-9969885 | None:intergenic |
| TTTAGTATGTTCCTCTTCTT+TGG | 0.151097 | 6_3:-9970000 | None:intergenic |
| TCCAGGACTATAGTGATATT+TGG | 0.181611 | 6_3:-9970924 | None:intergenic |
| AGCTTGACATGCAGTTCTTA+TGG | 0.234883 | 6_3:+9971181 | Msa0938210:CDS |
| AGAGCTATATGGAAGATAAA+AGG | 0.235932 | 6_3:+9969946 | Msa0938210:CDS |
| ACCAAATCAGTAACATTCTT+TGG | 0.278283 | 6_3:-9969382 | None:intergenic |
| GCTGCATCTTACCTAACTTT+AGG | 0.286313 | 6_3:+9970420 | Msa0938210:CDS |
| AGGAATAGATTTGGTGAAAC+AGG | 0.295450 | 6_3:+9970383 | Msa0938210:CDS |
| TTGTATTGTCTGTCACAATT+TGG | 0.299212 | 6_3:-9970155 | None:intergenic |
| CACTATAGTCCTGGATTTAG+AGG | 0.304361 | 6_3:+9970932 | Msa0938210:CDS |
| GCACATTGGTGGGACTGTTT+TGG | 0.304418 | 6_3:+9971115 | Msa0938210:CDS |
| ACAATCAGAGCTAACAAAAT+TGG | 0.305053 | 6_3:+9971144 | Msa0938210:CDS |
| GCCAAAGAATGTTACTGATT+TGG | 0.305432 | 6_3:+9969381 | Msa0938210:CDS |
| CTCAATCTTAGCTCTTTCTT+CGG | 0.308027 | 6_3:-9971011 | None:intergenic |
| TGGTTTAGATTCTAAGATAA+TGG | 0.310688 | 6_3:+9969357 | Msa0938210:CDS |
| AGCTTAAATCTTAATGATAA+TGG | 0.313708 | 6_3:+9971424 | Msa0938210:CDS |
| TTGCTCCAATGCCTCATAAA+TGG | 0.327403 | 6_3:-9970658 | None:intergenic |
| CCGTAAGGGCGACTGATAAA+TGG | 0.330488 | 6_3:+9971086 | Msa0938210:CDS |
| ATATGTCGAGGATGTGGTTT+TGG | 0.335955 | 6_3:+9970533 | Msa0938210:CDS |
| GGTTTAGATTCTAAGATAAT+GGG | 0.339023 | 6_3:+9969358 | Msa0938210:CDS |
| GCTTGACATGCAGTTCTTAT+GGG | 0.340385 | 6_3:+9971182 | Msa0938210:CDS |
| CATTCCTCGTCTTCGCCAAC+TGG | 0.340904 | 6_3:-9970506 | None:intergenic |
| TTACGTCACTTGGCTGGAAC+TGG | 0.345492 | 6_3:+9969493 | Msa0938210:CDS |
| ATCATCTTAAAGAGTTTGTT+AGG | 0.355223 | 6_3:-9970093 | None:intergenic |
| CCAGGACTATAGTGATATTT+GGG | 0.359234 | 6_3:-9970923 | None:intergenic |
| GAATGTTACTGATTTGGTTA+TGG | 0.361350 | 6_3:+9969387 | Msa0938210:CDS |
| TCAATCTTAGCTCTTTCTTC+GGG | 0.361654 | 6_3:-9971010 | None:intergenic |
| GGCATTGGAGCAAGCTAAAC+AGG | 0.361924 | 6_3:+9970668 | Msa0938210:CDS |
| TGTAATTGTCTCTTCATGAA+TGG | 0.362539 | 6_3:-9970289 | None:intergenic |
| TAAGTTGACAAGGGAAGCTT+TGG | 0.365983 | 6_3:+9969915 | Msa0938210:CDS |
| TTACCTTTCTGTGACACCTT+TGG | 0.366893 | 6_3:-9970709 | None:intergenic |
| TTGGTTTCAAGACATGGATT+AGG | 0.372024 | 6_3:+9969838 | Msa0938210:CDS |
| GGTCCATCCATCAACCATTA+TGG | 0.374680 | 6_3:-9969974 | None:intergenic |
| AACTTGATGATTTCGATAAA+CGG | 0.377584 | 6_3:+9971038 | Msa0938210:CDS |
| CCTGGTTAAAGTGCTTTGTT+TGG | 0.388256 | 6_3:+9970605 | Msa0938210:CDS |
| CATGAATACAACCTAAAGTT+AGG | 0.389412 | 6_3:-9970431 | None:intergenic |
| ACACACAATTGAGATGATAT+TGG | 0.393937 | 6_3:+9970248 | Msa0938210:CDS |
| CTTCACTAAAGGAATAGATT+TGG | 0.395812 | 6_3:+9970374 | Msa0938210:CDS |
| TTAGTATGTTCCTCTTCTTT+GGG | 0.398516 | 6_3:-9969999 | None:intergenic |
| ATCAGTCGCCCTTACGGCTA+CGG | 0.404316 | 6_3:-9971080 | None:intergenic |
| GTAATTGTCTCTTCATGAAT+GGG | 0.406055 | 6_3:-9970288 | None:intergenic |
| GGACAACTTGGACTTGGGTT+TGG | 0.414715 | 6_3:+9971468 | Msa0938210:CDS |
| ATGAAATTGTTGAAGAGGTT+GGG | 0.421082 | 6_3:+9970118 | Msa0938210:CDS |
| AGAAGCCCTTGAATGAATAA+AGG | 0.422807 | 6_3:-9970331 | None:intergenic |
| AGTCATGAGGAAGGGTGTGT+TGG | 0.428618 | 6_3:+9969601 | Msa0938210:CDS |
| CTGGCTGGACTTCCACTCCT+TGG | 0.428723 | 6_3:-9970487 | None:intergenic |
| AGCCACAGGTTCCATTTATG+AGG | 0.433469 | 6_3:+9970647 | Msa0938210:CDS |
| TCATATAGAGACTTCAGATA+TGG | 0.434208 | 6_3:-9971496 | None:intergenic |
| CAAGGGCTTCTCTCATTCCT+CGG | 0.436209 | 6_3:+9970343 | Msa0938210:CDS |
| GTTCTAGAGATGATTTGAAA+AGG | 0.436323 | 6_3:+9969665 | Msa0938210:CDS |
| CCATTTATCAGTCGCCCTTA+CGG | 0.437117 | 6_3:-9971086 | None:intergenic |
| GATGTGGACAACTTGGACTT+GGG | 0.442076 | 6_3:+9971463 | Msa0938210:CDS |
| TGGAAGAACATAGAGCTATA+TGG | 0.444164 | 6_3:+9969935 | Msa0938210:CDS |
| ACAACATACTACAAAGTTGC+TGG | 0.447151 | 6_3:+9970174 | Msa0938210:CDS |
| CGAAAAGGACTAGGTTGTAT+TGG | 0.449104 | 6_3:+9970211 | Msa0938210:CDS |
| GATAAAAGGGTGCACCATAA+TGG | 0.450002 | 6_3:+9969960 | Msa0938210:CDS |
| TTGTTTGGTCAGTTCAATAG+AGG | 0.450742 | 6_3:+9970620 | Msa0938210:CDS |
| TAAACCATCATTTCCAGAAA+AGG | 0.450880 | 6_3:-9969341 | None:intergenic |
| CCCAAATATCACTATAGTCC+TGG | 0.451084 | 6_3:+9970923 | Msa0938210:CDS |
| ACTTGATGATTTCGATAAAC+GGG | 0.452100 | 6_3:+9971039 | Msa0938210:CDS |
| AAGGGAATGAAGTGGCTGTT+GGG | 0.455501 | 6_3:+9969641 | Msa0938210:CDS |
| AATGATAATGGAGACATTGA+AGG | 0.456097 | 6_3:+9971436 | Msa0938210:CDS |
| CTTAGCTCTTTCTTCGGGAT+CGG | 0.457185 | 6_3:-9971005 | None:intergenic |
| CCTCGTCTTCGCCAACTGGC+TGG | 0.459626 | 6_3:-9970502 | None:intergenic |
| TCAGTCGCCCTTACGGCTAC+GGG | 0.461030 | 6_3:-9971079 | None:intergenic |
| TAACAAACTCTTTAAGATGA+TGG | 0.467474 | 6_3:+9970095 | Msa0938210:CDS |
| CAGTTGGCGAAGACGAGGAA+TGG | 0.470149 | 6_3:+9970507 | Msa0938210:CDS |
| CCTTTAAGGTCATCAAAAGA+AGG | 0.475758 | 6_3:-9969871 | None:intergenic |
| GAGCTATATGGAAGATAAAA+GGG | 0.478658 | 6_3:+9969947 | Msa0938210:CDS |
| TCATAAATGGAACCTGTGGC+TGG | 0.481667 | 6_3:-9970645 | None:intergenic |
| TCAATAGAGGAGCCAGCCAC+AGG | 0.484351 | 6_3:+9970633 | Msa0938210:CDS |
| TGGGTGATCCCGTAGCCGTA+AGG | 0.485493 | 6_3:+9971071 | Msa0938210:CDS |
| TGAGGTGAGAGAGGAAATGC+TGG | 0.485652 | 6_3:+9969555 | Msa0938210:CDS |
| AAAGGGAATGAAGTGGCTGT+TGG | 0.490439 | 6_3:+9969640 | Msa0938210:CDS |
| GGGTGCACCATAATGGTTGA+TGG | 0.497106 | 6_3:+9969967 | Msa0938210:CDS |
| AGGTTCCATTTATGAGGCAT+TGG | 0.499117 | 6_3:+9970653 | Msa0938210:CDS |
| TGGGAAATATGTCGAGGATG+TGG | 0.500347 | 6_3:+9970527 | Msa0938210:CDS |
| TTGCGTGATGAATATGCTAC+TGG | 0.500573 | 6_3:+9971532 | Msa0938210:CDS |
| GATGAAATTGTTGAAGAGGT+TGG | 0.502560 | 6_3:+9970117 | Msa0938210:CDS |
| CCTTAAAGGTAAATATTTGA+CGG | 0.503436 | 6_3:+9969885 | Msa0938210:CDS |
| CTAGAGATGATTTGAAAAGG+AGG | 0.505092 | 6_3:+9969668 | Msa0938210:CDS |
| CGGTTGCAGCACTTCACTAA+AGG | 0.505508 | 6_3:+9970363 | Msa0938210:CDS |
| GATTTGAAAAGGAGGAGAGT+TGG | 0.505908 | 6_3:+9969676 | Msa0938210:CDS |
| TATGTTCCTCTTCTTTGGGT+CGG | 0.509046 | 6_3:-9969995 | None:intergenic |
| TTTAGCCTTTATTCATTCAA+GGG | 0.512486 | 6_3:+9970326 | Msa0938210:CDS |
| AGTTGGCGAAGACGAGGAAT+GGG | 0.512875 | 6_3:+9970508 | Msa0938210:CDS |
| AGATGTGGACAACTTGGACT+TGG | 0.514194 | 6_3:+9971462 | Msa0938210:CDS |
| AGGTTTAGATGTGGACAACT+TGG | 0.514964 | 6_3:+9971456 | Msa0938210:CDS |
| CACAGCCCCTTGCATACTGC+AGG | 0.516801 | 6_3:+9970887 | Msa0938210:CDS |
| CGGAAGAAGTTAAGTTGACA+AGG | 0.518982 | 6_3:+9969905 | Msa0938210:CDS |
| ACTGATTTGGTTATGGAGCA+TGG | 0.519145 | 6_3:+9969394 | Msa0938210:CDS |
| AAACAGTCCCACCAATGTGC+AGG | 0.520573 | 6_3:-9971112 | None:intergenic |
| GTGATGACTACTTGTCTCGC+GGG | 0.522896 | 6_3:+9969458 | Msa0938210:CDS |
| AAAATAGCCTGCAGTATGCA+AGG | 0.524163 | 6_3:-9970894 | None:intergenic |
| TGTTGATGGCGAAAAGGACT+AGG | 0.525094 | 6_3:+9970202 | Msa0938210:CDS |
| CGTTGATGCGTCAAATATGT+TGG | 0.528217 | 6_3:+9970065 | Msa0938210:CDS |
| GTTGAAGTTTGTGAGGGTGT+TGG | 0.532860 | 6_3:+9969529 | Msa0938210:CDS |
| AAGCTTCTCGAGCGGTTGCA+AGG | 0.538858 | 6_3:+9969749 | Msa0938210:CDS |
| TTTCCAAAGGTGTCACAGAA+AGG | 0.539920 | 6_3:+9970706 | Msa0938210:CDS |
| TTAATATCACCTCTAAATCC+AGG | 0.541578 | 6_3:-9970941 | None:intergenic |
| TTGTGAGGGTGTTGGTGATG+AGG | 0.542544 | 6_3:+9969537 | Msa0938210:CDS |
| GGGTGATCCCGTAGCCGTAA+GGG | 0.546817 | 6_3:+9971072 | Msa0938210:CDS |
| AATGGATTCCTGCACATTGG+TGG | 0.546930 | 6_3:+9971104 | Msa0938210:CDS |
| AGAAAATTGTATAACAAGGA+TGG | 0.549016 | 6_3:+9970979 | Msa0938210:CDS |
| CCAAACAAAGCACTTTAACC+AGG | 0.554111 | 6_3:-9970605 | None:intergenic |
| GAGGAAGGGTGTGTTGGAGT+TGG | 0.555127 | 6_3:+9969607 | Msa0938210:CDS |
| GAGAAGAATGTTCACATCCA+AGG | 0.556716 | 6_3:+9970470 | Msa0938210:CDS |
| TGAAATTGTTGAAGAGGTTG+GGG | 0.557345 | 6_3:+9970119 | Msa0938210:CDS |
| AGTTGCTGGTGAGATGTTGA+TGG | 0.565937 | 6_3:+9970188 | Msa0938210:CDS |
| GTGAGATGTTGATGGCGAAA+AGG | 0.569828 | 6_3:+9970196 | Msa0938210:CDS |
| TGTGAGTTGGTTTCAAGACA+TGG | 0.572437 | 6_3:+9969832 | Msa0938210:CDS |
| CTTGACATGCAGTTCTTATG+GGG | 0.573706 | 6_3:+9971183 | Msa0938210:CDS |
| GTTTATTACTATGTGTGAGT+TGG | 0.574917 | 6_3:+9969819 | Msa0938210:CDS |
| TGTTGGTGATGAGGTGAGAG+AGG | 0.579278 | 6_3:+9969546 | Msa0938210:CDS |
| ATGGATTCCTGCACATTGGT+GGG | 0.581348 | 6_3:+9971105 | Msa0938210:CDS |
| GATGGATGAAATTGTTGAAG+AGG | 0.583327 | 6_3:+9970113 | Msa0938210:CDS |
| TTATCATCTTACCATCTCGA+AGG | 0.584228 | 6_3:-9971224 | None:intergenic |
| CAACATATTTGACGCATCAA+CGG | 0.585450 | 6_3:-9970064 | None:intergenic |
| TTAGTGAAGTGCTGCAACCG+AGG | 0.586944 | 6_3:-9970360 | None:intergenic |
| AAATAGCCTGCAGTATGCAA+GGG | 0.590672 | 6_3:-9970893 | None:intergenic |
| TGTGATGACTACTTGTCTCG+CGG | 0.591359 | 6_3:+9969457 | Msa0938210:CDS |
| CAAACAAAGCACTTTAACCA+GGG | 0.596306 | 6_3:-9970604 | None:intergenic |
| ATGGTTAAGAAGACTTTGAG+AGG | 0.598226 | 6_3:+9969724 | Msa0938210:CDS |
| ATATCTTAGTGAATAATCCC+AGG | 0.599732 | 6_3:+9970022 | Msa0938210:CDS |
| TTGCAAGAGAGTCATGAGGA+AGG | 0.602697 | 6_3:+9969592 | Msa0938210:CDS |
| TCAATTGTGTGTGTTGTACA+AGG | 0.603845 | 6_3:-9970237 | None:intergenic |
| GTCTAGAAAATTGTATAACA+AGG | 0.607022 | 6_3:+9970975 | Msa0938210:CDS |
| TGCAAGAGAGTCATGAGGAA+GGG | 0.607581 | 6_3:+9969593 | Msa0938210:CDS |
| AGACATTGAAGGTTTAGATG+TGG | 0.608979 | 6_3:+9971447 | Msa0938210:CDS |
| GCACCATAATGGTTGATGGA+TGG | 0.610235 | 6_3:+9969971 | Msa0938210:CDS |
| GGAATAGATTTGGTGAAACA+GGG | 0.611878 | 6_3:+9970384 | Msa0938210:CDS |
| GAATGTTCACATCCAAGGAG+TGG | 0.612273 | 6_3:+9970475 | Msa0938210:CDS |
| GATGGACCGACCCAAAGAAG+AGG | 0.613918 | 6_3:+9969989 | Msa0938210:CDS |
| TAATCAGAGTGCCTTCGAGA+TGG | 0.615533 | 6_3:+9971213 | Msa0938210:CDS |
| GTTTAGATTCTAAGATAATG+GGG | 0.628119 | 6_3:+9969359 | Msa0938210:CDS |
| GGAGTGGAAGTCCAGCCAGT+TGG | 0.628223 | 6_3:+9970491 | Msa0938210:CDS |
| AGCTATTGCTGTCAATAACA+TGG | 0.628294 | 6_3:+9969705 | Msa0938210:CDS |
| TGGTTAAGAAGACTTTGAGA+GGG | 0.629677 | 6_3:+9969725 | Msa0938210:CDS |
| GGTTGTATTCATGAGAACGA+AGG | 0.633370 | 6_3:+9970441 | Msa0938210:CDS |
| TGCCTCATAAATGGAACCTG+TGG | 0.634402 | 6_3:-9970649 | None:intergenic |
| TGTCAAGCTCAATATACGAA+TGG | 0.634622 | 6_3:-9971167 | None:intergenic |
| CAATGACATTCCGCTCGATG+CGG | 0.636439 | 6_3:+9969783 | Msa0938210:CDS |
| TCACTCTTTACCGCATCGAG+CGG | 0.637796 | 6_3:-9969793 | None:intergenic |
| AGGTGAGAGAGGAAATGCTG+GGG | 0.642079 | 6_3:+9969557 | Msa0938210:CDS |
| TTGACATGCAGTTCTTATGG+GGG | 0.643346 | 6_3:+9971184 | Msa0938210:CDS |
| GAGGTGAGAGAGGAAATGCT+GGG | 0.644686 | 6_3:+9969556 | Msa0938210:CDS |
| AAATGATGTTGAAGTTTGTG+AGG | 0.647447 | 6_3:+9969522 | Msa0938210:CDS |
| GAGAGGGGAAGCTTCTCGAG+CGG | 0.650063 | 6_3:+9969741 | Msa0938210:CDS |
| TGATTTGCAAGAGAGTCATG+AGG | 0.653227 | 6_3:+9969588 | Msa0938210:CDS |
| AATGATGTTGAAGTTTGTGA+GGG | 0.658615 | 6_3:+9969523 | Msa0938210:CDS |
| TCATGAAGAGACAATTACAA+AGG | 0.662380 | 6_3:+9970293 | Msa0938210:CDS |
| GAGGAATGGGAAATATGTCG+AGG | 0.663935 | 6_3:+9970521 | Msa0938210:CDS |
| AATAGCCTGCAGTATGCAAG+GGG | 0.664304 | 6_3:-9970892 | None:intergenic |
| TGATGACTACTTGTCTCGCG+GGG | 0.665196 | 6_3:+9969459 | Msa0938210:CDS |
| ATAAATGGATTCCTGCACAT+TGG | 0.666271 | 6_3:+9971101 | Msa0938210:CDS |
| GGTTAAGAAGACTTTGAGAG+GGG | 0.667282 | 6_3:+9969726 | Msa0938210:CDS |
| AAATTGTATAACAAGGATGG+TGG | 0.669219 | 6_3:+9970982 | Msa0938210:CDS |
| TTAAGGTCATCAAAAGAAGG+TGG | 0.677208 | 6_3:-9969868 | None:intergenic |
| AAACAAAGCACTTTAACCAG+GGG | 0.695208 | 6_3:-9970603 | None:intergenic |
| TCATTAATGATCTCCCATGG+AGG | 0.700841 | 6_3:-9970845 | None:intergenic |
| ATACGAATGAGTCTTTCCAA+AGG | 0.701346 | 6_3:+9970693 | Msa0938210:CDS |
| GGAAGAAGTTAAGTTGACAA+GGG | 0.723485 | 6_3:+9969906 | Msa0938210:CDS |
| GGTGATATTAAAGTTAAACG+TGG | 0.757074 | 6_3:+9970953 | Msa0938210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTAATTGTATTTGTAT+TGG | + | chr6_3:9971287-9971306 | Msa0938210:intron | 10.0% |
| !! | TATATTAATTGTATTTGTAT+TGG | + | chr6_3:9971287-9971306 | Msa0938210:intron | 10.0% |
| !!! | AAAAAGTGAATTACTTTTCA+CGG | - | chr6_3:9970805-9970824 | None:intergenic | 20.0% |
| !! | AATTAATATAAGCAAGTAGT+AGG | - | chr6_3:9971277-9971296 | None:intergenic | 20.0% |
| !!! | AATTGTATTTGTATTGGTAT+AGG | + | chr6_3:9971293-9971312 | Msa0938210:intron | 20.0% |
| !! | AGCTTAAATCTTAATGATAA+TGG | + | chr6_3:9971424-9971443 | Msa0938210:CDS | 20.0% |
| !!! | AAAAAGTGAATTACTTTTCA+CGG | - | chr6_3:9970805-9970824 | None:intergenic | 20.0% |
| !! | AATTAATATAAGCAAGTAGT+AGG | - | chr6_3:9971277-9971296 | None:intergenic | 20.0% |
| !!! | AATTGTATTTGTATTGGTAT+AGG | + | chr6_3:9971293-9971312 | Msa0938210:intron | 20.0% |
| !! | AGCTTAAATCTTAATGATAA+TGG | + | chr6_3:9971424-9971443 | Msa0938210:CDS | 20.0% |
| !!! | TGGTTTAGATTCTAAGATAA+TGG | + | chr6_3:9969357-9969376 | Msa0938210:CDS | 25.0% |
| !!! | GGTTTAGATTCTAAGATAAT+GGG | + | chr6_3:9969358-9969377 | Msa0938210:CDS | 25.0% |
| !!! | GTTTAGATTCTAAGATAATG+GGG | + | chr6_3:9969359-9969378 | Msa0938210:CDS | 25.0% |
| ! | CCTTAAAGGTAAATATTTGA+CGG | + | chr6_3:9969885-9969904 | Msa0938210:CDS | 25.0% |
| !! | ATCATCTTAAAGAGTTTGTT+AGG | - | chr6_3:9970096-9970115 | None:intergenic | 25.0% |
| !!! | TAACAAACTCTTTAAGATGA+TGG | + | chr6_3:9970095-9970114 | Msa0938210:CDS | 25.0% |
| !!! | TTTTAGCCTTTATTCATTCA+AGG | + | chr6_3:9970325-9970344 | Msa0938210:CDS | 25.0% |
| !! | TTTAGCCTTTATTCATTCAA+GGG | + | chr6_3:9970326-9970345 | Msa0938210:CDS | 25.0% |
| ! | GTCTAGAAAATTGTATAACA+AGG | + | chr6_3:9970975-9970994 | Msa0938210:CDS | 25.0% |
| ! | AGAAAATTGTATAACAAGGA+TGG | + | chr6_3:9970979-9970998 | Msa0938210:CDS | 25.0% |
| !! | AACTTGATGATTTCGATAAA+CGG | + | chr6_3:9971038-9971057 | Msa0938210:CDS | 25.0% |
| !!! | TGGTTTAGATTCTAAGATAA+TGG | + | chr6_3:9969357-9969376 | Msa0938210:CDS | 25.0% |
| !!! | GGTTTAGATTCTAAGATAAT+GGG | + | chr6_3:9969358-9969377 | Msa0938210:CDS | 25.0% |
| !!! | GTTTAGATTCTAAGATAATG+GGG | + | chr6_3:9969359-9969378 | Msa0938210:CDS | 25.0% |
| ! | CCTTAAAGGTAAATATTTGA+CGG | + | chr6_3:9969885-9969904 | Msa0938210:CDS | 25.0% |
| !! | ATCATCTTAAAGAGTTTGTT+AGG | - | chr6_3:9970096-9970115 | None:intergenic | 25.0% |
| !!! | TAACAAACTCTTTAAGATGA+TGG | + | chr6_3:9970095-9970114 | Msa0938210:CDS | 25.0% |
| !!! | TTTTAGCCTTTATTCATTCA+AGG | + | chr6_3:9970325-9970344 | Msa0938210:CDS | 25.0% |
| !! | TTTAGCCTTTATTCATTCAA+GGG | + | chr6_3:9970326-9970345 | Msa0938210:CDS | 25.0% |
| ! | GTCTAGAAAATTGTATAACA+AGG | + | chr6_3:9970975-9970994 | Msa0938210:CDS | 25.0% |
| ! | AGAAAATTGTATAACAAGGA+TGG | + | chr6_3:9970979-9970998 | Msa0938210:CDS | 25.0% |
| !! | AACTTGATGATTTCGATAAA+CGG | + | chr6_3:9971038-9971057 | Msa0938210:CDS | 25.0% |
| TAAACCATCATTTCCAGAAA+AGG | - | chr6_3:9969344-9969363 | None:intergenic | 30.0% | |
| ACCAAATCAGTAACATTCTT+TGG | - | chr6_3:9969385-9969404 | None:intergenic | 30.0% | |
| !! | GAATGTTACTGATTTGGTTA+TGG | + | chr6_3:9969387-9969406 | Msa0938210:CDS | 30.0% |
| AAATGATGTTGAAGTTTGTG+AGG | + | chr6_3:9969522-9969541 | Msa0938210:CDS | 30.0% | |
| AATGATGTTGAAGTTTGTGA+GGG | + | chr6_3:9969523-9969542 | Msa0938210:CDS | 30.0% | |
| !! | GAGTTGGTGAAAAAAGAAAA+GGG | + | chr6_3:9969623-9969642 | Msa0938210:CDS | 30.0% |
| AAAAAGAAAAGGGAATGAAG+TGG | + | chr6_3:9969633-9969652 | Msa0938210:CDS | 30.0% | |
| !! | GTTCTAGAGATGATTTGAAA+AGG | + | chr6_3:9969665-9969684 | Msa0938210:CDS | 30.0% |
| GTTTATTACTATGTGTGAGT+TGG | + | chr6_3:9969819-9969838 | Msa0938210:CDS | 30.0% | |
| CCGTCAAATATTTACCTTTA+AGG | - | chr6_3:9969888-9969907 | None:intergenic | 30.0% | |
| AGAGCTATATGGAAGATAAA+AGG | + | chr6_3:9969946-9969965 | Msa0938210:CDS | 30.0% | |
| GAGCTATATGGAAGATAAAA+GGG | + | chr6_3:9969947-9969966 | Msa0938210:CDS | 30.0% | |
| TTAGTATGTTCCTCTTCTTT+GGG | - | chr6_3:9970002-9970021 | None:intergenic | 30.0% | |
| TTTAGTATGTTCCTCTTCTT+TGG | - | chr6_3:9970003-9970022 | None:intergenic | 30.0% | |
| ATATCTTAGTGAATAATCCC+AGG | + | chr6_3:9970022-9970041 | Msa0938210:CDS | 30.0% | |
| TTCAAAAAGAATGTTCTCCT+GGG | - | chr6_3:9970042-9970061 | None:intergenic | 30.0% | |
| ATGAAATTGTTGAAGAGGTT+GGG | + | chr6_3:9970118-9970137 | Msa0938210:CDS | 30.0% | |
| TTGTATTGTCTGTCACAATT+TGG | - | chr6_3:9970158-9970177 | None:intergenic | 30.0% | |
| ACACACAATTGAGATGATAT+TGG | + | chr6_3:9970248-9970267 | Msa0938210:CDS | 30.0% | |
| GTAATTGTCTCTTCATGAAT+GGG | - | chr6_3:9970291-9970310 | None:intergenic | 30.0% | |
| TGTAATTGTCTCTTCATGAA+TGG | - | chr6_3:9970292-9970311 | None:intergenic | 30.0% | |
| TCATGAAGAGACAATTACAA+AGG | + | chr6_3:9970293-9970312 | Msa0938210:CDS | 30.0% | |
| CTTCACTAAAGGAATAGATT+TGG | + | chr6_3:9970374-9970393 | Msa0938210:CDS | 30.0% | |
| CATGAATACAACCTAAAGTT+AGG | - | chr6_3:9970434-9970453 | None:intergenic | 30.0% | |
| ! | TTTTCATTAATGATCTCCCA+TGG | - | chr6_3:9970851-9970870 | None:intergenic | 30.0% |
| TTAATATCACCTCTAAATCC+AGG | - | chr6_3:9970944-9970963 | None:intergenic | 30.0% | |
| GGTGATATTAAAGTTAAACG+TGG | + | chr6_3:9970953-9970972 | Msa0938210:CDS | 30.0% | |
| AAATTGTATAACAAGGATGG+TGG | + | chr6_3:9970982-9971001 | Msa0938210:CDS | 30.0% | |
| ! | ACTTGATGATTTCGATAAAC+GGG | + | chr6_3:9971039-9971058 | Msa0938210:CDS | 30.0% |
| ACAATCAGAGCTAACAAAAT+TGG | + | chr6_3:9971144-9971163 | Msa0938210:CDS | 30.0% | |
| !! | AATGATAATGGAGACATTGA+AGG | + | chr6_3:9971436-9971455 | Msa0938210:CDS | 30.0% |
| TCATATAGAGACTTCAGATA+TGG | - | chr6_3:9971499-9971518 | None:intergenic | 30.0% | |
| TAAACCATCATTTCCAGAAA+AGG | - | chr6_3:9969344-9969363 | None:intergenic | 30.0% | |
| ACCAAATCAGTAACATTCTT+TGG | - | chr6_3:9969385-9969404 | None:intergenic | 30.0% | |
| !! | GAATGTTACTGATTTGGTTA+TGG | + | chr6_3:9969387-9969406 | Msa0938210:CDS | 30.0% |
| AAATGATGTTGAAGTTTGTG+AGG | + | chr6_3:9969522-9969541 | Msa0938210:CDS | 30.0% | |
| AATGATGTTGAAGTTTGTGA+GGG | + | chr6_3:9969523-9969542 | Msa0938210:CDS | 30.0% | |
| !! | GAGTTGGTGAAAAAAGAAAA+GGG | + | chr6_3:9969623-9969642 | Msa0938210:CDS | 30.0% |
| AAAAAGAAAAGGGAATGAAG+TGG | + | chr6_3:9969633-9969652 | Msa0938210:CDS | 30.0% | |
| !! | GTTCTAGAGATGATTTGAAA+AGG | + | chr6_3:9969665-9969684 | Msa0938210:CDS | 30.0% |
| GTTTATTACTATGTGTGAGT+TGG | + | chr6_3:9969819-9969838 | Msa0938210:CDS | 30.0% | |
| CCGTCAAATATTTACCTTTA+AGG | - | chr6_3:9969888-9969907 | None:intergenic | 30.0% | |
| AGAGCTATATGGAAGATAAA+AGG | + | chr6_3:9969946-9969965 | Msa0938210:CDS | 30.0% | |
| GAGCTATATGGAAGATAAAA+GGG | + | chr6_3:9969947-9969966 | Msa0938210:CDS | 30.0% | |
| TTAGTATGTTCCTCTTCTTT+GGG | - | chr6_3:9970002-9970021 | None:intergenic | 30.0% | |
| TTTAGTATGTTCCTCTTCTT+TGG | - | chr6_3:9970003-9970022 | None:intergenic | 30.0% | |
| ATATCTTAGTGAATAATCCC+AGG | + | chr6_3:9970022-9970041 | Msa0938210:CDS | 30.0% | |
| TTCAAAAAGAATGTTCTCCT+GGG | - | chr6_3:9970042-9970061 | None:intergenic | 30.0% | |
| ATGAAATTGTTGAAGAGGTT+GGG | + | chr6_3:9970118-9970137 | Msa0938210:CDS | 30.0% | |
| TTGTATTGTCTGTCACAATT+TGG | - | chr6_3:9970158-9970177 | None:intergenic | 30.0% | |
| ACACACAATTGAGATGATAT+TGG | + | chr6_3:9970248-9970267 | Msa0938210:CDS | 30.0% | |
| GTAATTGTCTCTTCATGAAT+GGG | - | chr6_3:9970291-9970310 | None:intergenic | 30.0% | |
| TGTAATTGTCTCTTCATGAA+TGG | - | chr6_3:9970292-9970311 | None:intergenic | 30.0% | |
| TCATGAAGAGACAATTACAA+AGG | + | chr6_3:9970293-9970312 | Msa0938210:CDS | 30.0% | |
| CTTCACTAAAGGAATAGATT+TGG | + | chr6_3:9970374-9970393 | Msa0938210:CDS | 30.0% | |
| CATGAATACAACCTAAAGTT+AGG | - | chr6_3:9970434-9970453 | None:intergenic | 30.0% | |
| ! | TTTTCATTAATGATCTCCCA+TGG | - | chr6_3:9970851-9970870 | None:intergenic | 30.0% |
| TTAATATCACCTCTAAATCC+AGG | - | chr6_3:9970944-9970963 | None:intergenic | 30.0% | |
| GGTGATATTAAAGTTAAACG+TGG | + | chr6_3:9970953-9970972 | Msa0938210:CDS | 30.0% | |
| AAATTGTATAACAAGGATGG+TGG | + | chr6_3:9970982-9971001 | Msa0938210:CDS | 30.0% | |
| ! | ACTTGATGATTTCGATAAAC+GGG | + | chr6_3:9971039-9971058 | Msa0938210:CDS | 30.0% |
| ACAATCAGAGCTAACAAAAT+TGG | + | chr6_3:9971144-9971163 | Msa0938210:CDS | 30.0% | |
| !! | AATGATAATGGAGACATTGA+AGG | + | chr6_3:9971436-9971455 | Msa0938210:CDS | 30.0% |
| TCATATAGAGACTTCAGATA+TGG | - | chr6_3:9971499-9971518 | None:intergenic | 30.0% | |
| !! | GATTCCTTTTCTGGAAATGA+TGG | + | chr6_3:9969337-9969356 | Msa0938210:CDS | 35.0% |
| ! | GCCAAAGAATGTTACTGATT+TGG | + | chr6_3:9969381-9969400 | Msa0938210:CDS | 35.0% |
| ! | TTATGCGTTTTTACGTCACT+TGG | + | chr6_3:9969483-9969502 | Msa0938210:CDS | 35.0% |
| !! | GGAGTTGGTGAAAAAAGAAA+AGG | + | chr6_3:9969622-9969641 | Msa0938210:CDS | 35.0% |
| CTAGAGATGATTTGAAAAGG+AGG | + | chr6_3:9969668-9969687 | Msa0938210:CDS | 35.0% | |
| AGCTATTGCTGTCAATAACA+TGG | + | chr6_3:9969705-9969724 | Msa0938210:CDS | 35.0% | |
| ATGGTTAAGAAGACTTTGAG+AGG | + | chr6_3:9969724-9969743 | Msa0938210:CDS | 35.0% | |
| ! | TGGTTAAGAAGACTTTGAGA+GGG | + | chr6_3:9969725-9969744 | Msa0938210:CDS | 35.0% |
| TTGGTTTCAAGACATGGATT+AGG | + | chr6_3:9969838-9969857 | Msa0938210:CDS | 35.0% | |
| TTAAGGTCATCAAAAGAAGG+TGG | - | chr6_3:9969871-9969890 | None:intergenic | 35.0% | |
| !! | CCTTTAAGGTCATCAAAAGA+AGG | - | chr6_3:9969874-9969893 | None:intergenic | 35.0% |
| !! | CCTTCTTTTGATGACCTTAA+AGG | + | chr6_3:9969871-9969890 | Msa0938210:CDS | 35.0% |
| !! | GGAAGAAGTTAAGTTGACAA+GGG | + | chr6_3:9969906-9969925 | Msa0938210:CDS | 35.0% |
| TGGAAGAACATAGAGCTATA+TGG | + | chr6_3:9969935-9969954 | Msa0938210:CDS | 35.0% | |
| CTTCAAAAAGAATGTTCTCC+TGG | - | chr6_3:9970043-9970062 | None:intergenic | 35.0% | |
| CAACATATTTGACGCATCAA+CGG | - | chr6_3:9970067-9970086 | None:intergenic | 35.0% | |
| GATGGATGAAATTGTTGAAG+AGG | + | chr6_3:9970113-9970132 | Msa0938210:CDS | 35.0% | |
| GATGAAATTGTTGAAGAGGT+TGG | + | chr6_3:9970117-9970136 | Msa0938210:CDS | 35.0% | |
| TGAAATTGTTGAAGAGGTTG+GGG | + | chr6_3:9970119-9970138 | Msa0938210:CDS | 35.0% | |
| ACAACATACTACAAAGTTGC+TGG | + | chr6_3:9970174-9970193 | Msa0938210:CDS | 35.0% | |
| TCAATTGTGTGTGTTGTACA+AGG | - | chr6_3:9970240-9970259 | None:intergenic | 35.0% | |
| AGAAGCCCTTGAATGAATAA+AGG | - | chr6_3:9970334-9970353 | None:intergenic | 35.0% | |
| !! | AGGAATAGATTTGGTGAAAC+AGG | + | chr6_3:9970383-9970402 | Msa0938210:CDS | 35.0% |
| !! | GGAATAGATTTGGTGAAACA+GGG | + | chr6_3:9970384-9970403 | Msa0938210:CDS | 35.0% |
| ! | AAACAAAGCACTTTAACCAG+GGG | - | chr6_3:9970606-9970625 | None:intergenic | 35.0% |
| ! | CAAACAAAGCACTTTAACCA+GGG | - | chr6_3:9970607-9970626 | None:intergenic | 35.0% |
| TTGTTTGGTCAGTTCAATAG+AGG | + | chr6_3:9970620-9970639 | Msa0938210:CDS | 35.0% | |
| ATACGAATGAGTCTTTCCAA+AGG | + | chr6_3:9970693-9970712 | Msa0938210:CDS | 35.0% | |
| GAAAGGTAAATATGTCTTGC+AGG | + | chr6_3:9970723-9970742 | Msa0938210:intron | 35.0% | |
| !!! | GAGCTTTTGTTTTGTTGTCT+TGG | + | chr6_3:9970774-9970793 | Msa0938210:intron | 35.0% |
| !! | TTTTCAGTTTTATGCCTCCA+TGG | + | chr6_3:9970831-9970850 | Msa0938210:intron | 35.0% |
| !! | TTTCAGTTTTATGCCTCCAT+GGG | + | chr6_3:9970832-9970851 | Msa0938210:intron | 35.0% |
| CCAGGACTATAGTGATATTT+GGG | - | chr6_3:9970926-9970945 | None:intergenic | 35.0% | |
| TCCAGGACTATAGTGATATT+TGG | - | chr6_3:9970927-9970946 | None:intergenic | 35.0% | |
| ! | TCAATCTTAGCTCTTTCTTC+GGG | - | chr6_3:9971013-9971032 | None:intergenic | 35.0% |
| ! | CTCAATCTTAGCTCTTTCTT+CGG | - | chr6_3:9971014-9971033 | None:intergenic | 35.0% |
| ! | ATAAATGGATTCCTGCACAT+TGG | + | chr6_3:9971101-9971120 | Msa0938210:CDS | 35.0% |
| TGTCAAGCTCAATATACGAA+TGG | - | chr6_3:9971170-9971189 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6_3:9971227-9971246 | None:intergenic | 35.0% | |
| CTAAGAGAAGAAACCATTTG+AGG | + | chr6_3:9971322-9971341 | Msa0938210:intron | 35.0% | |
| !!! | CCCTCAATATTGCTTTTTCT+CGG | - | chr6_3:9971397-9971416 | None:intergenic | 35.0% |
| CCGAGAAAAAGCAATATTGA+GGG | + | chr6_3:9971394-9971413 | Msa0938210:CDS | 35.0% | |
| AGACATTGAAGGTTTAGATG+TGG | + | chr6_3:9971447-9971466 | Msa0938210:CDS | 35.0% | |
| !! | GATTCCTTTTCTGGAAATGA+TGG | + | chr6_3:9969337-9969356 | Msa0938210:CDS | 35.0% |
| ! | GCCAAAGAATGTTACTGATT+TGG | + | chr6_3:9969381-9969400 | Msa0938210:CDS | 35.0% |
| ! | TTATGCGTTTTTACGTCACT+TGG | + | chr6_3:9969483-9969502 | Msa0938210:CDS | 35.0% |
| !! | GGAGTTGGTGAAAAAAGAAA+AGG | + | chr6_3:9969622-9969641 | Msa0938210:CDS | 35.0% |
| CTAGAGATGATTTGAAAAGG+AGG | + | chr6_3:9969668-9969687 | Msa0938210:CDS | 35.0% | |
| AGCTATTGCTGTCAATAACA+TGG | + | chr6_3:9969705-9969724 | Msa0938210:CDS | 35.0% | |
| ATGGTTAAGAAGACTTTGAG+AGG | + | chr6_3:9969724-9969743 | Msa0938210:CDS | 35.0% | |
| ! | TGGTTAAGAAGACTTTGAGA+GGG | + | chr6_3:9969725-9969744 | Msa0938210:CDS | 35.0% |
| TTGGTTTCAAGACATGGATT+AGG | + | chr6_3:9969838-9969857 | Msa0938210:CDS | 35.0% | |
| TTAAGGTCATCAAAAGAAGG+TGG | - | chr6_3:9969871-9969890 | None:intergenic | 35.0% | |
| !! | CCTTTAAGGTCATCAAAAGA+AGG | - | chr6_3:9969874-9969893 | None:intergenic | 35.0% |
| !! | CCTTCTTTTGATGACCTTAA+AGG | + | chr6_3:9969871-9969890 | Msa0938210:CDS | 35.0% |
| !! | GGAAGAAGTTAAGTTGACAA+GGG | + | chr6_3:9969906-9969925 | Msa0938210:CDS | 35.0% |
| TGGAAGAACATAGAGCTATA+TGG | + | chr6_3:9969935-9969954 | Msa0938210:CDS | 35.0% | |
| CTTCAAAAAGAATGTTCTCC+TGG | - | chr6_3:9970043-9970062 | None:intergenic | 35.0% | |
| CAACATATTTGACGCATCAA+CGG | - | chr6_3:9970067-9970086 | None:intergenic | 35.0% | |
| GATGGATGAAATTGTTGAAG+AGG | + | chr6_3:9970113-9970132 | Msa0938210:CDS | 35.0% | |
| GATGAAATTGTTGAAGAGGT+TGG | + | chr6_3:9970117-9970136 | Msa0938210:CDS | 35.0% | |
| TGAAATTGTTGAAGAGGTTG+GGG | + | chr6_3:9970119-9970138 | Msa0938210:CDS | 35.0% | |
| ACAACATACTACAAAGTTGC+TGG | + | chr6_3:9970174-9970193 | Msa0938210:CDS | 35.0% | |
| TCAATTGTGTGTGTTGTACA+AGG | - | chr6_3:9970240-9970259 | None:intergenic | 35.0% | |
| AGAAGCCCTTGAATGAATAA+AGG | - | chr6_3:9970334-9970353 | None:intergenic | 35.0% | |
| !! | AGGAATAGATTTGGTGAAAC+AGG | + | chr6_3:9970383-9970402 | Msa0938210:CDS | 35.0% |
| !! | GGAATAGATTTGGTGAAACA+GGG | + | chr6_3:9970384-9970403 | Msa0938210:CDS | 35.0% |
| ! | AAACAAAGCACTTTAACCAG+GGG | - | chr6_3:9970606-9970625 | None:intergenic | 35.0% |
| ! | CAAACAAAGCACTTTAACCA+GGG | - | chr6_3:9970607-9970626 | None:intergenic | 35.0% |
| TTGTTTGGTCAGTTCAATAG+AGG | + | chr6_3:9970620-9970639 | Msa0938210:CDS | 35.0% | |
| ATACGAATGAGTCTTTCCAA+AGG | + | chr6_3:9970693-9970712 | Msa0938210:CDS | 35.0% | |
| GAAAGGTAAATATGTCTTGC+AGG | + | chr6_3:9970723-9970742 | Msa0938210:intron | 35.0% | |
| !!! | GAGCTTTTGTTTTGTTGTCT+TGG | + | chr6_3:9970774-9970793 | Msa0938210:intron | 35.0% |
| !! | TTTTCAGTTTTATGCCTCCA+TGG | + | chr6_3:9970831-9970850 | Msa0938210:intron | 35.0% |
| !! | TTTCAGTTTTATGCCTCCAT+GGG | + | chr6_3:9970832-9970851 | Msa0938210:intron | 35.0% |
| CCAGGACTATAGTGATATTT+GGG | - | chr6_3:9970926-9970945 | None:intergenic | 35.0% | |
| TCCAGGACTATAGTGATATT+TGG | - | chr6_3:9970927-9970946 | None:intergenic | 35.0% | |
| ! | TCAATCTTAGCTCTTTCTTC+GGG | - | chr6_3:9971013-9971032 | None:intergenic | 35.0% |
| ! | CTCAATCTTAGCTCTTTCTT+CGG | - | chr6_3:9971014-9971033 | None:intergenic | 35.0% |
| ! | ATAAATGGATTCCTGCACAT+TGG | + | chr6_3:9971101-9971120 | Msa0938210:CDS | 35.0% |
| TGTCAAGCTCAATATACGAA+TGG | - | chr6_3:9971170-9971189 | None:intergenic | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | - | chr6_3:9971227-9971246 | None:intergenic | 35.0% | |
| CTAAGAGAAGAAACCATTTG+AGG | + | chr6_3:9971322-9971341 | Msa0938210:intron | 35.0% | |
| !!! | CCCTCAATATTGCTTTTTCT+CGG | - | chr6_3:9971397-9971416 | None:intergenic | 35.0% |
| CCGAGAAAAAGCAATATTGA+GGG | + | chr6_3:9971394-9971413 | Msa0938210:CDS | 35.0% | |
| AGACATTGAAGGTTTAGATG+TGG | + | chr6_3:9971447-9971466 | Msa0938210:CDS | 35.0% | |
| !!! | AGCTCTGTTGATTCCTTTTC+TGG | + | chr6_3:9969328-9969347 | Msa0938210:CDS | 40.0% |
| !! | ACTGATTTGGTTATGGAGCA+TGG | + | chr6_3:9969394-9969413 | Msa0938210:CDS | 40.0% |
| !!! | GAGCATGGTGTTTTAGTTGA+TGG | + | chr6_3:9969409-9969428 | Msa0938210:CDS | 40.0% |
| ! | TGATTTGCAAGAGAGTCATG+AGG | + | chr6_3:9969588-9969607 | Msa0938210:CDS | 40.0% |
| GATTTGAAAAGGAGGAGAGT+TGG | + | chr6_3:9969676-9969695 | Msa0938210:CDS | 40.0% | |
| ! | GGTTAAGAAGACTTTGAGAG+GGG | + | chr6_3:9969726-9969745 | Msa0938210:CDS | 40.0% |
| !! | TGTGAGTTGGTTTCAAGACA+TGG | + | chr6_3:9969832-9969851 | Msa0938210:CDS | 40.0% |
| !! | CGGAAGAAGTTAAGTTGACA+AGG | + | chr6_3:9969905-9969924 | Msa0938210:CDS | 40.0% |
| ! | TAAGTTGACAAGGGAAGCTT+TGG | + | chr6_3:9969915-9969934 | Msa0938210:CDS | 40.0% |
| ! | GATAAAAGGGTGCACCATAA+TGG | + | chr6_3:9969960-9969979 | Msa0938210:CDS | 40.0% |
| TATGTTCCTCTTCTTTGGGT+CGG | - | chr6_3:9969998-9970017 | None:intergenic | 40.0% | |
| CGTTGATGCGTCAAATATGT+TGG | + | chr6_3:9970065-9970084 | Msa0938210:CDS | 40.0% | |
| CGAAAAGGACTAGGTTGTAT+TGG | + | chr6_3:9970211-9970230 | Msa0938210:CDS | 40.0% | |
| GCTGCATCTTACCTAACTTT+AGG | + | chr6_3:9970420-9970439 | Msa0938210:CDS | 40.0% | |
| GGTTGTATTCATGAGAACGA+AGG | + | chr6_3:9970441-9970460 | Msa0938210:CDS | 40.0% | |
| GAGAAGAATGTTCACATCCA+AGG | + | chr6_3:9970470-9970489 | Msa0938210:CDS | 40.0% | |
| ! | ATATGTCGAGGATGTGGTTT+TGG | + | chr6_3:9970533-9970552 | Msa0938210:CDS | 40.0% |
| !! | TTTTAAAAGTGCACATCCCC+TGG | + | chr6_3:9970587-9970606 | Msa0938210:CDS | 40.0% |
| ! | CCAAACAAAGCACTTTAACC+AGG | - | chr6_3:9970608-9970627 | None:intergenic | 40.0% |
| ! | CCTGGTTAAAGTGCTTTGTT+TGG | + | chr6_3:9970605-9970624 | Msa0938210:CDS | 40.0% |
| AGGTTCCATTTATGAGGCAT+TGG | + | chr6_3:9970653-9970672 | Msa0938210:CDS | 40.0% | |
| TTGCTCCAATGCCTCATAAA+TGG | - | chr6_3:9970661-9970680 | None:intergenic | 40.0% | |
| !! | TTTCCAAAGGTGTCACAGAA+AGG | + | chr6_3:9970706-9970725 | Msa0938210:CDS | 40.0% |
| TTACCTTTCTGTGACACCTT+TGG | - | chr6_3:9970712-9970731 | None:intergenic | 40.0% | |
| TCATTAATGATCTCCCATGG+AGG | - | chr6_3:9970848-9970867 | None:intergenic | 40.0% | |
| AAATAGCCTGCAGTATGCAA+GGG | - | chr6_3:9970896-9970915 | None:intergenic | 40.0% | |
| AAAATAGCCTGCAGTATGCA+AGG | - | chr6_3:9970897-9970916 | None:intergenic | 40.0% | |
| CCCAAATATCACTATAGTCC+TGG | + | chr6_3:9970923-9970942 | Msa0938210:CDS | 40.0% | |
| CACTATAGTCCTGGATTTAG+AGG | + | chr6_3:9970932-9970951 | Msa0938210:CDS | 40.0% | |
| ! | GATAAACGGGCAGATTTTCT+GGG | + | chr6_3:9971052-9971071 | Msa0938210:CDS | 40.0% |
| AGCTTGACATGCAGTTCTTA+TGG | + | chr6_3:9971181-9971200 | Msa0938210:CDS | 40.0% | |
| GCTTGACATGCAGTTCTTAT+GGG | + | chr6_3:9971182-9971201 | Msa0938210:CDS | 40.0% | |
| CTTGACATGCAGTTCTTATG+GGG | + | chr6_3:9971183-9971202 | Msa0938210:CDS | 40.0% | |
| TTGACATGCAGTTCTTATGG+GGG | + | chr6_3:9971184-9971203 | Msa0938210:CDS | 40.0% | |
| AATGGTTTCTTCTCTTAGCG+TGG | - | chr6_3:9971320-9971339 | None:intergenic | 40.0% | |
| ! | TACGAGTCTTTTGCCTCAAA+TGG | - | chr6_3:9971338-9971357 | None:intergenic | 40.0% |
| GCCGAGAAAAAGCAATATTG+AGG | + | chr6_3:9971393-9971412 | Msa0938210:intron | 40.0% | |
| AGGTTTAGATGTGGACAACT+TGG | + | chr6_3:9971456-9971475 | Msa0938210:CDS | 40.0% | |
| TTGCGTGATGAATATGCTAC+TGG | + | chr6_3:9971532-9971551 | Msa0938210:CDS | 40.0% | |
| !!! | AGCTCTGTTGATTCCTTTTC+TGG | + | chr6_3:9969328-9969347 | Msa0938210:CDS | 40.0% |
| !! | ACTGATTTGGTTATGGAGCA+TGG | + | chr6_3:9969394-9969413 | Msa0938210:CDS | 40.0% |
| !!! | GAGCATGGTGTTTTAGTTGA+TGG | + | chr6_3:9969409-9969428 | Msa0938210:CDS | 40.0% |
| ! | TGATTTGCAAGAGAGTCATG+AGG | + | chr6_3:9969588-9969607 | Msa0938210:CDS | 40.0% |
| GATTTGAAAAGGAGGAGAGT+TGG | + | chr6_3:9969676-9969695 | Msa0938210:CDS | 40.0% | |
| ! | GGTTAAGAAGACTTTGAGAG+GGG | + | chr6_3:9969726-9969745 | Msa0938210:CDS | 40.0% |
| !! | TGTGAGTTGGTTTCAAGACA+TGG | + | chr6_3:9969832-9969851 | Msa0938210:CDS | 40.0% |
| !! | CGGAAGAAGTTAAGTTGACA+AGG | + | chr6_3:9969905-9969924 | Msa0938210:CDS | 40.0% |
| ! | TAAGTTGACAAGGGAAGCTT+TGG | + | chr6_3:9969915-9969934 | Msa0938210:CDS | 40.0% |
| ! | GATAAAAGGGTGCACCATAA+TGG | + | chr6_3:9969960-9969979 | Msa0938210:CDS | 40.0% |
| TATGTTCCTCTTCTTTGGGT+CGG | - | chr6_3:9969998-9970017 | None:intergenic | 40.0% | |
| CGTTGATGCGTCAAATATGT+TGG | + | chr6_3:9970065-9970084 | Msa0938210:CDS | 40.0% | |
| CGAAAAGGACTAGGTTGTAT+TGG | + | chr6_3:9970211-9970230 | Msa0938210:CDS | 40.0% | |
| GCTGCATCTTACCTAACTTT+AGG | + | chr6_3:9970420-9970439 | Msa0938210:CDS | 40.0% | |
| GGTTGTATTCATGAGAACGA+AGG | + | chr6_3:9970441-9970460 | Msa0938210:CDS | 40.0% | |
| GAGAAGAATGTTCACATCCA+AGG | + | chr6_3:9970470-9970489 | Msa0938210:CDS | 40.0% | |
| ! | ATATGTCGAGGATGTGGTTT+TGG | + | chr6_3:9970533-9970552 | Msa0938210:CDS | 40.0% |
| !! | TTTTAAAAGTGCACATCCCC+TGG | + | chr6_3:9970587-9970606 | Msa0938210:CDS | 40.0% |
| ! | CCAAACAAAGCACTTTAACC+AGG | - | chr6_3:9970608-9970627 | None:intergenic | 40.0% |
| ! | CCTGGTTAAAGTGCTTTGTT+TGG | + | chr6_3:9970605-9970624 | Msa0938210:CDS | 40.0% |
| AGGTTCCATTTATGAGGCAT+TGG | + | chr6_3:9970653-9970672 | Msa0938210:CDS | 40.0% | |
| TTGCTCCAATGCCTCATAAA+TGG | - | chr6_3:9970661-9970680 | None:intergenic | 40.0% | |
| !! | TTTCCAAAGGTGTCACAGAA+AGG | + | chr6_3:9970706-9970725 | Msa0938210:CDS | 40.0% |
| TTACCTTTCTGTGACACCTT+TGG | - | chr6_3:9970712-9970731 | None:intergenic | 40.0% | |
| TCATTAATGATCTCCCATGG+AGG | - | chr6_3:9970848-9970867 | None:intergenic | 40.0% | |
| AAATAGCCTGCAGTATGCAA+GGG | - | chr6_3:9970896-9970915 | None:intergenic | 40.0% | |
| AAAATAGCCTGCAGTATGCA+AGG | - | chr6_3:9970897-9970916 | None:intergenic | 40.0% | |
| CCCAAATATCACTATAGTCC+TGG | + | chr6_3:9970923-9970942 | Msa0938210:CDS | 40.0% | |
| CACTATAGTCCTGGATTTAG+AGG | + | chr6_3:9970932-9970951 | Msa0938210:CDS | 40.0% | |
| ! | GATAAACGGGCAGATTTTCT+GGG | + | chr6_3:9971052-9971071 | Msa0938210:CDS | 40.0% |
| AGCTTGACATGCAGTTCTTA+TGG | + | chr6_3:9971181-9971200 | Msa0938210:CDS | 40.0% | |
| GCTTGACATGCAGTTCTTAT+GGG | + | chr6_3:9971182-9971201 | Msa0938210:CDS | 40.0% | |
| CTTGACATGCAGTTCTTATG+GGG | + | chr6_3:9971183-9971202 | Msa0938210:CDS | 40.0% | |
| TTGACATGCAGTTCTTATGG+GGG | + | chr6_3:9971184-9971203 | Msa0938210:CDS | 40.0% | |
| AATGGTTTCTTCTCTTAGCG+TGG | - | chr6_3:9971320-9971339 | None:intergenic | 40.0% | |
| ! | TACGAGTCTTTTGCCTCAAA+TGG | - | chr6_3:9971338-9971357 | None:intergenic | 40.0% |
| GCCGAGAAAAAGCAATATTG+AGG | + | chr6_3:9971393-9971412 | Msa0938210:intron | 40.0% | |
| AGGTTTAGATGTGGACAACT+TGG | + | chr6_3:9971456-9971475 | Msa0938210:CDS | 40.0% | |
| TTGCGTGATGAATATGCTAC+TGG | + | chr6_3:9971532-9971551 | Msa0938210:CDS | 40.0% | |
| TGTGATGACTACTTGTCTCG+CGG | + | chr6_3:9969457-9969476 | Msa0938210:CDS | 45.0% | |
| ! | GTTGAAGTTTGTGAGGGTGT+TGG | + | chr6_3:9969529-9969548 | Msa0938210:CDS | 45.0% |
| TTGCAAGAGAGTCATGAGGA+AGG | + | chr6_3:9969592-9969611 | Msa0938210:CDS | 45.0% | |
| TGCAAGAGAGTCATGAGGAA+GGG | + | chr6_3:9969593-9969612 | Msa0938210:CDS | 45.0% | |
| AAAGGGAATGAAGTGGCTGT+TGG | + | chr6_3:9969640-9969659 | Msa0938210:CDS | 45.0% | |
| AAGGGAATGAAGTGGCTGTT+GGG | + | chr6_3:9969641-9969660 | Msa0938210:CDS | 45.0% | |
| !! | GCACCATAATGGTTGATGGA+TGG | + | chr6_3:9969971-9969990 | Msa0938210:CDS | 45.0% |
| GGTCCATCCATCAACCATTA+TGG | - | chr6_3:9969977-9969996 | None:intergenic | 45.0% | |
| AGTTGCTGGTGAGATGTTGA+TGG | + | chr6_3:9970188-9970207 | Msa0938210:CDS | 45.0% | |
| !! | GTGAGATGTTGATGGCGAAA+AGG | + | chr6_3:9970196-9970215 | Msa0938210:CDS | 45.0% |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6_3:9970202-9970221 | Msa0938210:CDS | 45.0% |
| GAATGTTCACATCCAAGGAG+TGG | + | chr6_3:9970475-9970494 | Msa0938210:CDS | 45.0% | |
| GAGGAATGGGAAATATGTCG+AGG | + | chr6_3:9970521-9970540 | Msa0938210:CDS | 45.0% | |
| TGGGAAATATGTCGAGGATG+TGG | + | chr6_3:9970527-9970546 | Msa0938210:CDS | 45.0% | |
| !!! | AGGATGTGGTTTTGGACACA+CGG | + | chr6_3:9970541-9970560 | Msa0938210:CDS | 45.0% |
| !!! | TGGTTTTGGACACACGGTTT+TGG | + | chr6_3:9970547-9970566 | Msa0938210:CDS | 45.0% |
| !!! | GGTTTTGGACACACGGTTTT+GGG | + | chr6_3:9970548-9970567 | Msa0938210:CDS | 45.0% |
| TCATAAATGGAACCTGTGGC+TGG | - | chr6_3:9970648-9970667 | None:intergenic | 45.0% | |
| AGCCACAGGTTCCATTTATG+AGG | + | chr6_3:9970647-9970666 | Msa0938210:CDS | 45.0% | |
| TGCCTCATAAATGGAACCTG+TGG | - | chr6_3:9970652-9970671 | None:intergenic | 45.0% | |
| AATAGCCTGCAGTATGCAAG+GGG | - | chr6_3:9970895-9970914 | None:intergenic | 45.0% | |
| ! | CTTAGCTCTTTCTTCGGGAT+CGG | - | chr6_3:9971008-9971027 | None:intergenic | 45.0% |
| ! | CGATAAACGGGCAGATTTTC+TGG | + | chr6_3:9971051-9971070 | Msa0938210:CDS | 45.0% |
| CCATTTATCAGTCGCCCTTA+CGG | - | chr6_3:9971089-9971108 | None:intergenic | 45.0% | |
| ! | AATGGATTCCTGCACATTGG+TGG | + | chr6_3:9971104-9971123 | Msa0938210:CDS | 45.0% |
| ATGGATTCCTGCACATTGGT+GGG | + | chr6_3:9971105-9971124 | Msa0938210:CDS | 45.0% | |
| ! | TAATCAGAGTGCCTTCGAGA+TGG | + | chr6_3:9971213-9971232 | Msa0938210:CDS | 45.0% |
| AGATGTGGACAACTTGGACT+TGG | + | chr6_3:9971462-9971481 | Msa0938210:CDS | 45.0% | |
| GATGTGGACAACTTGGACTT+GGG | + | chr6_3:9971463-9971482 | Msa0938210:CDS | 45.0% | |
| TGTGATGACTACTTGTCTCG+CGG | + | chr6_3:9969457-9969476 | Msa0938210:CDS | 45.0% | |
| ! | GTTGAAGTTTGTGAGGGTGT+TGG | + | chr6_3:9969529-9969548 | Msa0938210:CDS | 45.0% |
| TTGCAAGAGAGTCATGAGGA+AGG | + | chr6_3:9969592-9969611 | Msa0938210:CDS | 45.0% | |
| TGCAAGAGAGTCATGAGGAA+GGG | + | chr6_3:9969593-9969612 | Msa0938210:CDS | 45.0% | |
| AAAGGGAATGAAGTGGCTGT+TGG | + | chr6_3:9969640-9969659 | Msa0938210:CDS | 45.0% | |
| AAGGGAATGAAGTGGCTGTT+GGG | + | chr6_3:9969641-9969660 | Msa0938210:CDS | 45.0% | |
| !! | GCACCATAATGGTTGATGGA+TGG | + | chr6_3:9969971-9969990 | Msa0938210:CDS | 45.0% |
| GGTCCATCCATCAACCATTA+TGG | - | chr6_3:9969977-9969996 | None:intergenic | 45.0% | |
| AGTTGCTGGTGAGATGTTGA+TGG | + | chr6_3:9970188-9970207 | Msa0938210:CDS | 45.0% | |
| !! | GTGAGATGTTGATGGCGAAA+AGG | + | chr6_3:9970196-9970215 | Msa0938210:CDS | 45.0% |
| !! | TGTTGATGGCGAAAAGGACT+AGG | + | chr6_3:9970202-9970221 | Msa0938210:CDS | 45.0% |
| GAATGTTCACATCCAAGGAG+TGG | + | chr6_3:9970475-9970494 | Msa0938210:CDS | 45.0% | |
| GAGGAATGGGAAATATGTCG+AGG | + | chr6_3:9970521-9970540 | Msa0938210:CDS | 45.0% | |
| TGGGAAATATGTCGAGGATG+TGG | + | chr6_3:9970527-9970546 | Msa0938210:CDS | 45.0% | |
| !!! | AGGATGTGGTTTTGGACACA+CGG | + | chr6_3:9970541-9970560 | Msa0938210:CDS | 45.0% |
| !!! | TGGTTTTGGACACACGGTTT+TGG | + | chr6_3:9970547-9970566 | Msa0938210:CDS | 45.0% |
| !!! | GGTTTTGGACACACGGTTTT+GGG | + | chr6_3:9970548-9970567 | Msa0938210:CDS | 45.0% |
| TCATAAATGGAACCTGTGGC+TGG | - | chr6_3:9970648-9970667 | None:intergenic | 45.0% | |
| AGCCACAGGTTCCATTTATG+AGG | + | chr6_3:9970647-9970666 | Msa0938210:CDS | 45.0% | |
| TGCCTCATAAATGGAACCTG+TGG | - | chr6_3:9970652-9970671 | None:intergenic | 45.0% | |
| AATAGCCTGCAGTATGCAAG+GGG | - | chr6_3:9970895-9970914 | None:intergenic | 45.0% | |
| ! | CTTAGCTCTTTCTTCGGGAT+CGG | - | chr6_3:9971008-9971027 | None:intergenic | 45.0% |
| ! | CGATAAACGGGCAGATTTTC+TGG | + | chr6_3:9971051-9971070 | Msa0938210:CDS | 45.0% |
| CCATTTATCAGTCGCCCTTA+CGG | - | chr6_3:9971089-9971108 | None:intergenic | 45.0% | |
| ! | AATGGATTCCTGCACATTGG+TGG | + | chr6_3:9971104-9971123 | Msa0938210:CDS | 45.0% |
| ATGGATTCCTGCACATTGGT+GGG | + | chr6_3:9971105-9971124 | Msa0938210:CDS | 45.0% | |
| ! | TAATCAGAGTGCCTTCGAGA+TGG | + | chr6_3:9971213-9971232 | Msa0938210:CDS | 45.0% |
| AGATGTGGACAACTTGGACT+TGG | + | chr6_3:9971462-9971481 | Msa0938210:CDS | 45.0% | |
| GATGTGGACAACTTGGACTT+GGG | + | chr6_3:9971463-9971482 | Msa0938210:CDS | 45.0% | |
| GTGATGACTACTTGTCTCGC+GGG | + | chr6_3:9969458-9969477 | Msa0938210:CDS | 50.0% | |
| TGATGACTACTTGTCTCGCG+GGG | + | chr6_3:9969459-9969478 | Msa0938210:CDS | 50.0% | |
| ! | GCGTTTTTACGTCACTTGGC+TGG | + | chr6_3:9969487-9969506 | Msa0938210:CDS | 50.0% |
| TTACGTCACTTGGCTGGAAC+TGG | + | chr6_3:9969493-9969512 | Msa0938210:CDS | 50.0% | |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6_3:9969537-9969556 | Msa0938210:CDS | 50.0% |
| !! | TGTTGGTGATGAGGTGAGAG+AGG | + | chr6_3:9969546-9969565 | Msa0938210:CDS | 50.0% |
| TGAGGTGAGAGAGGAAATGC+TGG | + | chr6_3:9969555-9969574 | Msa0938210:CDS | 50.0% | |
| GAGGTGAGAGAGGAAATGCT+GGG | + | chr6_3:9969556-9969575 | Msa0938210:CDS | 50.0% | |
| AGGTGAGAGAGGAAATGCTG+GGG | + | chr6_3:9969557-9969576 | Msa0938210:CDS | 50.0% | |
| ! | AGTCATGAGGAAGGGTGTGT+TGG | + | chr6_3:9969601-9969620 | Msa0938210:CDS | 50.0% |
| CAATGACATTCCGCTCGATG+CGG | + | chr6_3:9969783-9969802 | Msa0938210:CDS | 50.0% | |
| TCACTCTTTACCGCATCGAG+CGG | - | chr6_3:9969796-9969815 | None:intergenic | 50.0% | |
| GGGTGCACCATAATGGTTGA+TGG | + | chr6_3:9969967-9969986 | Msa0938210:CDS | 50.0% | |
| CAAGGGCTTCTCTCATTCCT+CGG | + | chr6_3:9970343-9970362 | Msa0938210:CDS | 50.0% | |
| !! | TTAGTGAAGTGCTGCAACCG+AGG | - | chr6_3:9970363-9970382 | None:intergenic | 50.0% |
| CGGTTGCAGCACTTCACTAA+AGG | + | chr6_3:9970363-9970382 | Msa0938210:CDS | 50.0% | |
| AGTTGGCGAAGACGAGGAAT+GGG | + | chr6_3:9970508-9970527 | Msa0938210:CDS | 50.0% | |
| ! | GGCATTGGAGCAAGCTAAAC+AGG | + | chr6_3:9970668-9970687 | Msa0938210:CDS | 50.0% |
| CCGTAAGGGCGACTGATAAA+TGG | + | chr6_3:9971086-9971105 | Msa0938210:CDS | 50.0% | |
| AAACAGTCCCACCAATGTGC+AGG | - | chr6_3:9971115-9971134 | None:intergenic | 50.0% | |
| ! | GCACATTGGTGGGACTGTTT+TGG | + | chr6_3:9971115-9971134 | Msa0938210:CDS | 50.0% |
| GGACAACTTGGACTTGGGTT+TGG | + | chr6_3:9971468-9971487 | Msa0938210:CDS | 50.0% | |
| GTGATGACTACTTGTCTCGC+GGG | + | chr6_3:9969458-9969477 | Msa0938210:CDS | 50.0% | |
| TGATGACTACTTGTCTCGCG+GGG | + | chr6_3:9969459-9969478 | Msa0938210:CDS | 50.0% | |
| ! | GCGTTTTTACGTCACTTGGC+TGG | + | chr6_3:9969487-9969506 | Msa0938210:CDS | 50.0% |
| TTACGTCACTTGGCTGGAAC+TGG | + | chr6_3:9969493-9969512 | Msa0938210:CDS | 50.0% | |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | + | chr6_3:9969537-9969556 | Msa0938210:CDS | 50.0% |
| !! | TGTTGGTGATGAGGTGAGAG+AGG | + | chr6_3:9969546-9969565 | Msa0938210:CDS | 50.0% |
| TGAGGTGAGAGAGGAAATGC+TGG | + | chr6_3:9969555-9969574 | Msa0938210:CDS | 50.0% | |
| GAGGTGAGAGAGGAAATGCT+GGG | + | chr6_3:9969556-9969575 | Msa0938210:CDS | 50.0% | |
| AGGTGAGAGAGGAAATGCTG+GGG | + | chr6_3:9969557-9969576 | Msa0938210:CDS | 50.0% | |
| ! | AGTCATGAGGAAGGGTGTGT+TGG | + | chr6_3:9969601-9969620 | Msa0938210:CDS | 50.0% |
| CAATGACATTCCGCTCGATG+CGG | + | chr6_3:9969783-9969802 | Msa0938210:CDS | 50.0% | |
| TCACTCTTTACCGCATCGAG+CGG | - | chr6_3:9969796-9969815 | None:intergenic | 50.0% | |
| GGGTGCACCATAATGGTTGA+TGG | + | chr6_3:9969967-9969986 | Msa0938210:CDS | 50.0% | |
| CAAGGGCTTCTCTCATTCCT+CGG | + | chr6_3:9970343-9970362 | Msa0938210:CDS | 50.0% | |
| !! | TTAGTGAAGTGCTGCAACCG+AGG | - | chr6_3:9970363-9970382 | None:intergenic | 50.0% |
| CGGTTGCAGCACTTCACTAA+AGG | + | chr6_3:9970363-9970382 | Msa0938210:CDS | 50.0% | |
| AGTTGGCGAAGACGAGGAAT+GGG | + | chr6_3:9970508-9970527 | Msa0938210:CDS | 50.0% | |
| ! | GGCATTGGAGCAAGCTAAAC+AGG | + | chr6_3:9970668-9970687 | Msa0938210:CDS | 50.0% |
| CCGTAAGGGCGACTGATAAA+TGG | + | chr6_3:9971086-9971105 | Msa0938210:CDS | 50.0% | |
| AAACAGTCCCACCAATGTGC+AGG | - | chr6_3:9971115-9971134 | None:intergenic | 50.0% | |
| ! | GCACATTGGTGGGACTGTTT+TGG | + | chr6_3:9971115-9971134 | Msa0938210:CDS | 50.0% |
| GGACAACTTGGACTTGGGTT+TGG | + | chr6_3:9971468-9971487 | Msa0938210:CDS | 50.0% | |
| ! | GAGGAAGGGTGTGTTGGAGT+TGG | + | chr6_3:9969607-9969626 | Msa0938210:CDS | 55.0% |
| AAGCTTCTCGAGCGGTTGCA+AGG | + | chr6_3:9969749-9969768 | Msa0938210:CDS | 55.0% | |
| GATGGACCGACCCAAAGAAG+AGG | + | chr6_3:9969989-9970008 | Msa0938210:CDS | 55.0% | |
| CATTCCTCGTCTTCGCCAAC+TGG | - | chr6_3:9970509-9970528 | None:intergenic | 55.0% | |
| CAGTTGGCGAAGACGAGGAA+TGG | + | chr6_3:9970507-9970526 | Msa0938210:CDS | 55.0% | |
| TCAATAGAGGAGCCAGCCAC+AGG | + | chr6_3:9970633-9970652 | Msa0938210:CDS | 55.0% | |
| ATCAGTCGCCCTTACGGCTA+CGG | - | chr6_3:9971083-9971102 | None:intergenic | 55.0% | |
| ! | GAGGAAGGGTGTGTTGGAGT+TGG | + | chr6_3:9969607-9969626 | Msa0938210:CDS | 55.0% |
| AAGCTTCTCGAGCGGTTGCA+AGG | + | chr6_3:9969749-9969768 | Msa0938210:CDS | 55.0% | |
| GATGGACCGACCCAAAGAAG+AGG | + | chr6_3:9969989-9970008 | Msa0938210:CDS | 55.0% | |
| CATTCCTCGTCTTCGCCAAC+TGG | - | chr6_3:9970509-9970528 | None:intergenic | 55.0% | |
| CAGTTGGCGAAGACGAGGAA+TGG | + | chr6_3:9970507-9970526 | Msa0938210:CDS | 55.0% | |
| TCAATAGAGGAGCCAGCCAC+AGG | + | chr6_3:9970633-9970652 | Msa0938210:CDS | 55.0% | |
| ATCAGTCGCCCTTACGGCTA+CGG | - | chr6_3:9971083-9971102 | None:intergenic | 55.0% | |
| GAGAGGGGAAGCTTCTCGAG+CGG | + | chr6_3:9969741-9969760 | Msa0938210:CDS | 60.0% | |
| CTGGCTGGACTTCCACTCCT+TGG | - | chr6_3:9970490-9970509 | None:intergenic | 60.0% | |
| GGAGTGGAAGTCCAGCCAGT+TGG | + | chr6_3:9970491-9970510 | Msa0938210:CDS | 60.0% | |
| CACAGCCCCTTGCATACTGC+AGG | + | chr6_3:9970887-9970906 | Msa0938210:CDS | 60.0% | |
| TGGGTGATCCCGTAGCCGTA+AGG | + | chr6_3:9971071-9971090 | Msa0938210:CDS | 60.0% | |
| GGGTGATCCCGTAGCCGTAA+GGG | + | chr6_3:9971072-9971091 | Msa0938210:CDS | 60.0% | |
| TCAGTCGCCCTTACGGCTAC+GGG | - | chr6_3:9971082-9971101 | None:intergenic | 60.0% | |
| GAGAGGGGAAGCTTCTCGAG+CGG | + | chr6_3:9969741-9969760 | Msa0938210:CDS | 60.0% | |
| CTGGCTGGACTTCCACTCCT+TGG | - | chr6_3:9970490-9970509 | None:intergenic | 60.0% | |
| GGAGTGGAAGTCCAGCCAGT+TGG | + | chr6_3:9970491-9970510 | Msa0938210:CDS | 60.0% | |
| CACAGCCCCTTGCATACTGC+AGG | + | chr6_3:9970887-9970906 | Msa0938210:CDS | 60.0% | |
| TGGGTGATCCCGTAGCCGTA+AGG | + | chr6_3:9971071-9971090 | Msa0938210:CDS | 60.0% | |
| GGGTGATCCCGTAGCCGTAA+GGG | + | chr6_3:9971072-9971091 | Msa0938210:CDS | 60.0% | |
| TCAGTCGCCCTTACGGCTAC+GGG | - | chr6_3:9971082-9971101 | None:intergenic | 60.0% | |
| CCTCGTCTTCGCCAACTGGC+TGG | - | chr6_3:9970505-9970524 | None:intergenic | 65.0% | |
| CCAGCCAGTTGGCGAAGACG+AGG | + | chr6_3:9970502-9970521 | Msa0938210:CDS | 65.0% | |
| CCTCGTCTTCGCCAACTGGC+TGG | - | chr6_3:9970505-9970524 | None:intergenic | 65.0% | |
| CCAGCCAGTTGGCGAAGACG+AGG | + | chr6_3:9970502-9970521 | Msa0938210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 9969313 | 9971561 | 9969313 | ID=Msa0938210;Name=Msa0938210 |
| chr6_3 | mRNA | 9969313 | 9971561 | 9969313 | ID=Msa0938210-mRNA-1;Parent=Msa0938210;Name=Msa0938210-mRNA-1;_AED=0.88;_eAED=0.97;_QI=0|0|0|0.66|1|1|3|0|659 |
| chr6_3 | exon | 9969313 | 9970727 | 9969313 | ID=Msa0938210-mRNA-1:exon:3132;Parent=Msa0938210-mRNA-1 |
| chr6_3 | exon | 9970838 | 9971234 | 9970838 | ID=Msa0938210-mRNA-1:exon:3133;Parent=Msa0938210-mRNA-1 |
| chr6_3 | exon | 9971394 | 9971561 | 9971394 | ID=Msa0938210-mRNA-1:exon:3134;Parent=Msa0938210-mRNA-1 |
| chr6_3 | CDS | 9969313 | 9970727 | 9969313 | ID=Msa0938210-mRNA-1:cds;Parent=Msa0938210-mRNA-1 |
| chr6_3 | CDS | 9970838 | 9971234 | 9970838 | ID=Msa0938210-mRNA-1:cds;Parent=Msa0938210-mRNA-1 |
| chr6_3 | CDS | 9971394 | 9971561 | 9971394 | ID=Msa0938210-mRNA-1:cds;Parent=Msa0938210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
