Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073580 | XP_003625041.1 | 78.788 | 132 | 12 | 1 | 1 | 116 | 252 | 383 | 9.06e-63 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073580 | sp|Q9SLG8|SSL2_ARATH | 44.030 | 134 | 53 | 4 | 3 | 114 | 238 | 371 | 3.23e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073580 | G7KRP0 | 78.788 | 132 | 12 | 1 | 1 | 116 | 252 | 383 | 4.33e-63 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1073580 | 0.808319 | 3.284238e-50 | -8.615850e-47 |
| Msa0011720 | Msa1073580 | 0.809812 | 1.572909e-50 | -8.615850e-47 |
| Msa0020630 | Msa1073580 | 0.806118 | 9.606572e-50 | -8.615850e-47 |
| Msa0037820 | Msa1073580 | 0.809228 | 2.098529e-50 | -8.615850e-47 |
| Msa0060600 | Msa1073580 | 0.802704 | 4.944730e-49 | -8.615850e-47 |
| Msa0062750 | Msa1073580 | 0.821828 | 3.280254e-53 | -8.615850e-47 |
| Msa0083160 | Msa1073580 | 0.803260 | 3.795296e-49 | -8.615850e-47 |
| Msa0094100 | Msa1073580 | 0.810652 | 1.036147e-50 | -8.615850e-47 |
| Msa0105340 | Msa1073580 | 0.829356 | 5.388866e-55 | -8.615850e-47 |
| Msa0605230 | Msa1073580 | 0.814690 | 1.354616e-51 | -8.615850e-47 |
| Msa0617370 | Msa1073580 | 0.806222 | 9.134206e-50 | -8.615850e-47 |
| Msa0620640 | Msa1073580 | 0.806036 | 9.996687e-50 | -8.615850e-47 |
| Msa0647000 | Msa1073580 | 0.820953 | 5.224160e-53 | -8.615850e-47 |
| Msa0657670 | Msa1073580 | 0.802559 | 5.297741e-49 | -8.615850e-47 |
| Msa0663090 | Msa1073580 | 0.815566 | 8.657855e-52 | -8.615850e-47 |
| Msa0707780 | Msa1073580 | 0.800990 | 1.112080e-48 | -8.615850e-47 |
| Msa0723140 | Msa1073580 | 0.803834 | 2.885035e-49 | -8.615850e-47 |
| Msa0726610 | Msa1073580 | 0.829649 | 4.574935e-55 | -8.615850e-47 |
| Msa0750380 | Msa1073580 | 0.837346 | 5.487608e-57 | -8.615850e-47 |
| Msa0752580 | Msa1073580 | 0.823383 | 1.426833e-53 | -8.615850e-47 |
| Msa0754500 | Msa1073580 | 0.811912 | 5.520830e-51 | -8.615850e-47 |
| Msa0756480 | Msa1073580 | 0.818847 | 1.582801e-52 | -8.615850e-47 |
| Msa0760890 | Msa1073580 | 0.802952 | 4.393716e-49 | -8.615850e-47 |
| Msa0770430 | Msa1073580 | 0.812754 | 3.616544e-51 | -8.615850e-47 |
| Msa0772150 | Msa1073580 | 0.805449 | 1.327879e-49 | -8.615850e-47 |
| Msa0775580 | Msa1073580 | 0.804508 | 2.088419e-49 | -8.615850e-47 |
| Msa0780140 | Msa1073580 | 0.808309 | 3.299002e-50 | -8.615850e-47 |
| Msa0792510 | Msa1073580 | 0.802687 | 4.985346e-49 | -8.615850e-47 |
| Msa0794460 | Msa1073580 | 0.832980 | 6.934974e-56 | -8.615850e-47 |
| Msa0807730 | Msa1073580 | 0.808962 | 2.392809e-50 | -8.615850e-47 |
| Msa0811510 | Msa1073580 | 0.801380 | 9.253986e-49 | -8.615850e-47 |
| Msa0828570 | Msa1073580 | 0.808473 | 3.043625e-50 | -8.615850e-47 |
| Msa0830720 | Msa1073580 | 0.830978 | 2.165547e-55 | -8.615850e-47 |
| Msa0830900 | Msa1073580 | 0.824797 | 6.642903e-54 | -8.615850e-47 |
| Msa0835510 | Msa1073580 | 0.809922 | 1.489121e-50 | -8.615850e-47 |
| Msa0159750 | Msa1073580 | 0.804185 | 2.438970e-49 | -8.615850e-47 |
| Msa0162030 | Msa1073580 | 0.806589 | 7.645267e-50 | -8.615850e-47 |
| Msa0162050 | Msa1073580 | 0.800834 | 1.196811e-48 | -8.615850e-47 |
| Msa0162070 | Msa1073580 | 0.814415 | 1.558632e-51 | -8.615850e-47 |
| Msa0213080 | Msa1073580 | 0.801504 | 8.727094e-49 | -8.615850e-47 |
| Msa0371610 | Msa1073580 | 0.803818 | 2.907655e-49 | -8.615850e-47 |
| Msa0389060 | Msa1073580 | 0.800997 | 1.108477e-48 | -8.615850e-47 |
| Msa0411000 | Msa1073580 | 0.830483 | 2.862484e-55 | -8.615850e-47 |
| Msa0413740 | Msa1073580 | 0.807025 | 6.183060e-50 | -8.615850e-47 |
| Msa0414070 | Msa1073580 | 0.800260 | 1.566911e-48 | -8.615850e-47 |
| Msa0437710 | Msa1073580 | 0.809255 | 2.071278e-50 | -8.615850e-47 |
| Msa0455230 | Msa1073580 | 0.818339 | 2.063832e-52 | -8.615850e-47 |
| Msa0462190 | Msa1073580 | 0.804678 | 1.925391e-49 | -8.615850e-47 |
| Msa0462590 | Msa1073580 | 0.800160 | 1.641926e-48 | -8.615850e-47 |
| Msa0988500 | Msa1073580 | 0.802404 | 5.701693e-49 | -8.615850e-47 |
| Msa1000470 | Msa1073580 | 0.802868 | 4.574384e-49 | -8.615850e-47 |
| Msa1016110 | Msa1073580 | 0.800920 | 1.149073e-48 | -8.615850e-47 |
| Msa1032350 | Msa1073580 | 0.806193 | 9.263844e-50 | -8.615850e-47 |
| Msa1036390 | Msa1073580 | 0.818412 | 1.986664e-52 | -8.615850e-47 |
| Msa1044040 | Msa1073580 | 0.801280 | 9.701956e-49 | -8.615850e-47 |
| Msa1055360 | Msa1073580 | 0.800042 | 1.735050e-48 | -8.615850e-47 |
| Msa1069300 | Msa1073580 | 0.808065 | 3.719423e-50 | -8.615850e-47 |
| Msa1072350 | Msa1073580 | 0.824316 | 8.624375e-54 | -8.615850e-47 |
| Msa1073580 | Msa1076680 | 0.823221 | 1.556764e-53 | -8.615850e-47 |
| Msa1073580 | Msa1081700 | 0.821994 | 3.003097e-53 | -8.615850e-47 |
| Msa1073580 | Msa1093390 | 0.815879 | 7.373445e-52 | -8.615850e-47 |
| Msa1073580 | Msa1097380 | 0.800185 | 1.622555e-48 | -8.615850e-47 |
| Msa1073580 | Msa1102540 | 0.811318 | 7.434753e-51 | -8.615850e-47 |
| Msa1073580 | Msa1118140 | 0.810353 | 1.202620e-50 | -8.615850e-47 |
| Msa1073580 | Msa1130650 | 0.836704 | 8.004200e-57 | -8.615850e-47 |
| Msa1073580 | Msa1140010 | 0.800600 | 1.335532e-48 | -8.615850e-47 |
| Msa1073580 | Msa1225820 | 0.815163 | 1.064272e-51 | -8.615850e-47 |
| Msa1073580 | Msa1254950 | 0.802097 | 6.594894e-49 | -8.615850e-47 |
| Msa1073580 | Msa1262310 | 0.805059 | 1.602355e-49 | -8.615850e-47 |
| Msa1073580 | Msa1264560 | 0.804525 | 2.072241e-49 | -8.615850e-47 |
| Msa1073580 | Msa1272130 | 0.813372 | 2.647084e-51 | -8.615850e-47 |
| Msa1073580 | Msa1279850 | 0.801290 | 9.654277e-49 | -8.615850e-47 |
| Msa1073580 | Msa1279860 | 0.829661 | 4.542354e-55 | -8.615850e-47 |
| Msa1073580 | Msa1279870 | 0.824890 | 6.315568e-54 | -8.615850e-47 |
| Msa1073580 | Msa1280120 | 0.802708 | 4.935855e-49 | -8.615850e-47 |
| Msa1073580 | Msa1287160 | 0.821159 | 4.683619e-53 | -8.615850e-47 |
| Msa1073580 | Msa1287340 | 0.817461 | 3.258125e-52 | -8.615850e-47 |
| Msa1073580 | Msa1287690 | 0.807569 | 4.741982e-50 | -8.615850e-47 |
| Msa1073580 | Msa1308590 | 0.815969 | 7.039699e-52 | -8.615850e-47 |
| Msa1073580 | Msa1308640 | 0.811211 | 7.843701e-51 | -8.615850e-47 |
| Msa1073580 | Msa1317710 | 0.804397 | 2.202580e-49 | -8.615850e-47 |
| Msa1073580 | Msa1329990 | 0.806628 | 7.498983e-50 | -8.615850e-47 |
| Msa1073580 | Msa1335720 | 0.825748 | 3.958133e-54 | -8.615850e-47 |
| Msa1073580 | Msa1385620 | 0.808717 | 2.700256e-50 | -8.615850e-47 |
| Msa1073580 | Msa1386520 | 0.823660 | 1.228763e-53 | -8.615850e-47 |
| Msa1073580 | Msa1397540 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa1073580 | Msa1412520 | 0.803994 | 2.671905e-49 | -8.615850e-47 |
| Msa1073580 | Msa1418200 | 0.813968 | 1.956198e-51 | -8.615850e-47 |
| Msa1073580 | Msa1440180 | 0.801520 | 8.663604e-49 | -8.615850e-47 |
| Msa1073580 | Msa1447440 | 0.800333 | 1.514264e-48 | -8.615850e-47 |
| Msa1073580 | Msa1449740 | 0.803592 | 3.238180e-49 | -8.615850e-47 |
| Msa0252180 | Msa1073580 | 0.805313 | 1.417682e-49 | -8.615850e-47 |
| Msa0265820 | Msa1073580 | 0.816104 | 6.567980e-52 | -8.615850e-47 |
| Msa0296610 | Msa1073580 | 0.811630 | 6.360442e-51 | -8.615850e-47 |
| Msa0323630 | Msa1073580 | 0.835640 | 1.491595e-56 | -8.615850e-47 |
| Msa0334980 | Msa1073580 | 0.807766 | 4.305377e-50 | -8.615850e-47 |
| Msa0347130 | Msa1073580 | 0.808342 | 3.247175e-50 | -8.615850e-47 |
| Msa0363460 | Msa1073580 | 0.813083 | 3.062246e-51 | -8.615850e-47 |
| Msa0505390 | Msa1073580 | 0.806545 | 7.808642e-50 | -8.615850e-47 |
| Msa0509970 | Msa1073580 | 0.813880 | 2.046141e-51 | -8.615850e-47 |
| Msa0530930 | Msa1073580 | 0.824241 | 8.978627e-54 | -8.615850e-47 |
| Msa0542040 | Msa1073580 | 0.803923 | 2.765494e-49 | -8.615850e-47 |
| Msa0549740 | Msa1073580 | 0.804179 | 2.446272e-49 | -8.615850e-47 |
| Msa0563140 | Msa1073580 | 0.841094 | 5.853846e-58 | -8.615850e-47 |
| Msa0574170 | Msa1073580 | 0.800811 | 1.209440e-48 | -8.615850e-47 |
| Msa0577230 | Msa1073580 | 0.823853 | 1.107447e-53 | -8.615850e-47 |
| Msa0587900 | Msa1073580 | 0.805174 | 1.516218e-49 | -8.615850e-47 |
| Msa0598250 | Msa1073580 | 0.839969 | 1.152683e-57 | -8.615850e-47 |
| Msa0843280 | Msa1073580 | 0.821698 | 3.515758e-53 | -8.615850e-47 |
| Msa0847200 | Msa1073580 | 0.810645 | 1.039900e-50 | -8.615850e-47 |
| Msa0848360 | Msa1073580 | 0.801540 | 8.579871e-49 | -8.615850e-47 |
| Msa0848380 | Msa1073580 | 0.802364 | 5.810509e-49 | -8.615850e-47 |
| Msa0863250 | Msa1073580 | 0.812607 | 3.893015e-51 | -8.615850e-47 |
| Msa0870630 | Msa1073580 | 0.812129 | 4.950740e-51 | -8.615850e-47 |
| Msa0883450 | Msa1073580 | 0.816454 | 5.484672e-52 | -8.615850e-47 |
| Msa0887070 | Msa1073580 | 0.817559 | 3.097567e-52 | -8.615850e-47 |
| Msa0899700 | Msa1073580 | 0.813453 | 2.539904e-51 | -8.615850e-47 |
| Msa0903730 | Msa1073580 | 0.834857 | 2.351742e-56 | -8.615850e-47 |
| Msa0909710 | Msa1073580 | 0.804949 | 1.689477e-49 | -8.615850e-47 |
| Msa0950620 | Msa1073580 | 0.813147 | 2.965472e-51 | -8.615850e-47 |
| Msa0951720 | Msa1073580 | 0.821897 | 3.162183e-53 | -8.615850e-47 |
| Msa0964680 | Msa1073580 | 0.855946 | 4.482598e-62 | -8.615850e-47 |
| Msa0970050 | Msa1073580 | 0.822347 | 2.487413e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073580 | MtrunA17_Chr7g0256591 | 78.788 | 132 | 12 | 1 | 1 | 116 | 252 | 383 | 8.34e-67 | 211 |
| Msa1073580 | MtrunA17_Chr7g0256601 | 78.030 | 132 | 13 | 1 | 1 | 116 | 283 | 414 | 3.79e-65 | 208 |
| Msa1073580 | MtrunA17_Chr7g0256571 | 41.803 | 122 | 58 | 1 | 1 | 109 | 238 | 359 | 1.31e-26 | 105 |
| Msa1073580 | MtrunA17_Chr7g0256581 | 41.667 | 120 | 57 | 1 | 3 | 109 | 240 | 359 | 5.55e-24 | 98.6 |
| Msa1073580 | MtrunA17_Chr7g0256561 | 38.596 | 114 | 45 | 1 | 1 | 114 | 242 | 330 | 2.26e-20 | 88.2 |
| Msa1073580 | MtrunA17_Chr2g0322241 | 37.795 | 127 | 64 | 2 | 3 | 114 | 264 | 390 | 3.70e-20 | 88.2 |
| Msa1073580 | MtrunA17_Chr4g0025341 | 38.400 | 125 | 62 | 2 | 5 | 114 | 262 | 386 | 5.90e-20 | 87.4 |
| Msa1073580 | MtrunA17_Chr2g0329531 | 32.231 | 121 | 68 | 2 | 3 | 109 | 276 | 396 | 2.86e-16 | 77.0 |
| Msa1073580 | MtrunA17_Chr5g0443561 | 39.252 | 107 | 37 | 2 | 3 | 109 | 235 | 313 | 8.25e-16 | 75.5 |
| Msa1073580 | MtrunA17_Chr4g0062061 | 34.783 | 115 | 54 | 2 | 3 | 115 | 22 | 117 | 1.14e-12 | 63.2 |
| Msa1073580 | MtrunA17_Chr4g0062031 | 35.398 | 113 | 52 | 2 | 3 | 115 | 231 | 322 | 4.45e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073580 | AT2G41290.1 | 44.030 | 134 | 53 | 4 | 3 | 114 | 238 | 371 | 3.29e-27 | 107 |
| Msa1073580 | AT3G57030.1 | 44.186 | 129 | 57 | 2 | 1 | 114 | 241 | 369 | 1.13e-24 | 100 |
| Msa1073580 | AT2G41300.1 | 40.984 | 122 | 57 | 3 | 3 | 109 | 262 | 383 | 7.50e-23 | 96.3 |
| Msa1073580 | AT5G22020.3 | 40.000 | 125 | 60 | 2 | 5 | 114 | 266 | 390 | 1.83e-21 | 92.4 |
| Msa1073580 | AT5G22020.1 | 40.000 | 125 | 60 | 2 | 5 | 114 | 266 | 390 | 1.83e-21 | 92.4 |
| Msa1073580 | AT5G22020.2 | 40.000 | 125 | 60 | 2 | 5 | 114 | 266 | 390 | 1.83e-21 | 92.4 |
| Msa1073580 | AT1G08470.1 | 40.000 | 125 | 60 | 2 | 5 | 114 | 260 | 384 | 2.83e-21 | 91.7 |
| Msa1073580 | AT3G57020.2 | 38.843 | 121 | 58 | 4 | 5 | 109 | 225 | 345 | 6.00e-21 | 90.5 |
| Msa1073580 | AT3G57020.1 | 38.843 | 121 | 58 | 4 | 5 | 109 | 239 | 359 | 6.79e-21 | 90.5 |
| Msa1073580 | AT3G57010.1 | 40.496 | 121 | 56 | 4 | 5 | 109 | 240 | 360 | 5.47e-20 | 87.8 |
| Msa1073580 | AT3G59530.3 | 31.884 | 138 | 67 | 4 | 3 | 126 | 278 | 402 | 2.56e-14 | 72.0 |
| Msa1073580 | AT3G59530.2 | 31.884 | 138 | 67 | 4 | 3 | 126 | 278 | 402 | 2.56e-14 | 72.0 |
| Msa1073580 | AT3G59530.1 | 31.884 | 138 | 67 | 4 | 3 | 126 | 278 | 402 | 2.56e-14 | 72.0 |
Find 69 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCCAATGTTCCAGCTTT+AGG | 0.237744 | 7_2:-71144223 | None:intergenic |
| GGAGTCCAAGAGGAGGATTT+TGG | 0.244632 | 7_2:+71144284 | Msa1073580:CDS |
| ATCCATCACCTTGGATATTC+CGG | 0.329998 | 7_2:-71145784 | None:intergenic |
| CTACAAAATGTAGAATATTA+AGG | 0.335376 | 7_2:+71144185 | Msa1073580:intron |
| GGAGTACTGGATTGGCAATT+AGG | 0.337863 | 7_2:+71144434 | Msa1073580:CDS |
| AATGTAGAATATTAAGGTAT+TGG | 0.356659 | 7_2:+71144191 | Msa1073580:intron |
| TGCGACGATGGTGGTGGACG+GGG | 0.376235 | 7_2:-71145625 | None:intergenic |
| TTGCGACGATGGTGGTGGAC+GGG | 0.383640 | 7_2:-71145626 | None:intergenic |
| AAATATCCTTGGATAGGAAA+AGG | 0.423941 | 7_2:+71144352 | Msa1073580:CDS |
| GTGAGGTTGAGGAAAGAGAT+GGG | 0.434748 | 7_2:+71144524 | Msa1073580:CDS |
| AGGAAAGAGATGGGGTATTG+TGG | 0.454316 | 7_2:+71144533 | Msa1073580:CDS |
| AGTGAGGTTGAGGAAAGAGA+TGG | 0.459563 | 7_2:+71144523 | Msa1073580:CDS |
| CATATTTGGCTAAGGTGAAA+GGG | 0.464547 | 7_2:+71144413 | Msa1073580:intron |
| AACACCTAAAGCTGGAACAT+TGG | 0.466304 | 7_2:+71144219 | Msa1073580:CDS |
| ATCATAGAAGTGGTAATAGA+AGG | 0.466599 | 7_2:+71144494 | Msa1073580:CDS |
| CTTGCGACGATGGTGGTGGA+CGG | 0.468876 | 7_2:-71145627 | None:intergenic |
| AATGGATGCTAAAATATCCT+TGG | 0.469758 | 7_2:+71144341 | Msa1073580:CDS |
| GGAAAGAGATGGGGTATTGT+GGG | 0.470944 | 7_2:+71144534 | Msa1073580:CDS |
| TCATATTTGGCTAAGGTGAA+AGG | 0.488191 | 7_2:+71144412 | Msa1073580:intron |
| CCAACCCAAAATCCTCCTCT+TGG | 0.492583 | 7_2:-71144289 | None:intergenic |
| AATATCCTTGGATAGGAAAA+GGG | 0.503384 | 7_2:+71144353 | Msa1073580:CDS |
| ATTTCTATAACGAGATTTGA+GGG | 0.504299 | 7_2:-71145564 | None:intergenic |
| GCTAAGGTGAAAGGGAGTAC+TGG | 0.506609 | 7_2:+71144421 | Msa1073580:intron |
| CTCAAATTCGAACGGATCGA+AGG | 0.507813 | 7_2:-71145739 | None:intergenic |
| GATGACAATGGTGGCGGCGA+CGG | 0.509198 | 7_2:-71145540 | None:intergenic |
| CTTGGATATTCCGGTGACAT+TGG | 0.513567 | 7_2:-71145775 | None:intergenic |
| GTGGCGGCGACGGATGGTCG+TGG | 0.517393 | 7_2:-71145530 | None:intergenic |
| GATTTCTATAACGAGATTTG+AGG | 0.521984 | 7_2:-71145565 | None:intergenic |
| AAGGTCTATTAGTGAGGTTG+AGG | 0.522210 | 7_2:+71144513 | Msa1073580:CDS |
| GCGACGATGGTGGTGGACGG+GGG | 0.524933 | 7_2:-71145624 | None:intergenic |
| GAAGTCTTTGCTAATCTACC+AGG | 0.529415 | 7_2:+71144241 | Msa1073580:CDS |
| ACAATGGTGGCGGCGACGGA+TGG | 0.530218 | 7_2:-71145536 | None:intergenic |
| ATGCTAAAATATCCTTGGAT+AGG | 0.532866 | 7_2:+71144346 | Msa1073580:CDS |
| GGCAATTAGGCTAAGTGAGG+AGG | 0.546325 | 7_2:+71144447 | Msa1073580:CDS |
| AGGAAGTAAGAAGATGACAT+AGG | 0.546753 | 7_2:-71145478 | None:intergenic |
| CACCGGAATATCCAAGGTGA+TGG | 0.546932 | 7_2:+71145782 | Msa1073580:CDS |
| GGTGAAAGGGAGTACTGGAT+TGG | 0.549277 | 7_2:+71144426 | Msa1073580:intron |
| AAGTGAGGAGGGTGATGTGT+TGG | 0.550992 | 7_2:+71144459 | Msa1073580:CDS |
| AGAGATGGGGTATTGTGGGT+TGG | 0.554389 | 7_2:+71144538 | Msa1073580:CDS |
| TGGTTAGAAACACCTAAAGC+TGG | 0.557207 | 7_2:+71144211 | Msa1073580:CDS |
| ATTTGTGTGGCTTGCGACGA+TGG | 0.560953 | 7_2:-71145637 | None:intergenic |
| GAGAATTCAGAGAGGAGAGA+GGG | 0.561708 | 7_2:+71145689 | Msa1073580:CDS |
| TTTATGTTGTCAGGAAAACC+TGG | 0.565676 | 7_2:-71144259 | None:intergenic |
| GTCGTTGTCACCAATGTCAC+CGG | 0.566451 | 7_2:+71145765 | Msa1073580:CDS |
| TCCTTGGATAGGAAAAGGGT+TGG | 0.581523 | 7_2:+71144357 | Msa1073580:CDS |
| TGAGGTTGAGGAAAGAGATG+GGG | 0.585531 | 7_2:+71144525 | Msa1073580:CDS |
| AGAACGAGAGGGAATTGTAG+TGG | 0.586714 | 7_2:-71145447 | None:intergenic |
| GTGGCTTGCGACGATGGTGG+TGG | 0.588680 | 7_2:-71145631 | None:intergenic |
| CGACGATGGTGGTGGACGGG+GGG | 0.596200 | 7_2:-71145623 | None:intergenic |
| ATATGAAAACTGCTGACACA+TGG | 0.606509 | 7_2:+71145658 | Msa1073580:CDS |
| GAGGGCGATGACAATGGTGG+CGG | 0.610834 | 7_2:-71145546 | None:intergenic |
| CAATGTCACCGGAATATCCA+AGG | 0.612392 | 7_2:+71145776 | Msa1073580:CDS |
| GCAATTAGGCTAAGTGAGGA+GGG | 0.616806 | 7_2:+71144448 | Msa1073580:CDS |
| AGATTTGAGGGCGATGACAA+TGG | 0.618198 | 7_2:-71145552 | None:intergenic |
| AACATAAAACGGAGTCCAAG+AGG | 0.625086 | 7_2:+71144274 | Msa1073580:CDS |
| TCAACTTCGATCCATCACCT+TGG | 0.626450 | 7_2:-71145793 | None:intergenic |
| AGAGAATTCAGAGAGGAGAG+AGG | 0.626471 | 7_2:+71145688 | Msa1073580:CDS |
| TAATAGAAGGTCTATTAGTG+AGG | 0.628030 | 7_2:+71144507 | Msa1073580:CDS |
| TAGGTTAGAGACAGAACGAG+AGG | 0.640274 | 7_2:-71145459 | None:intergenic |
| TGAGAACTGAGATCTAAGAG+AGG | 0.646049 | 7_2:-71145498 | None:intergenic |
| TTTGAGGGCGATGACAATGG+TGG | 0.664148 | 7_2:-71145549 | None:intergenic |
| AGGTTAGAGACAGAACGAGA+GGG | 0.666091 | 7_2:-71145458 | None:intergenic |
| GGATCGAAGGTCAAAGACGA+TGG | 0.668255 | 7_2:-71145726 | None:intergenic |
| ACGACGTACTCAAATTCGAA+CGG | 0.677048 | 7_2:-71145747 | None:intergenic |
| TGTGTGGCTTGCGACGATGG+TGG | 0.682128 | 7_2:-71145634 | None:intergenic |
| ATGATAGAGAGAATTCAGAG+AGG | 0.682615 | 7_2:+71145681 | Msa1073580:CDS |
| ATTGGCAATTAGGCTAAGTG+AGG | 0.684553 | 7_2:+71144444 | Msa1073580:CDS |
| ATAAAACGGAGTCCAAGAGG+AGG | 0.723711 | 7_2:+71144277 | Msa1073580:CDS |
| CGTTTGGTGAGTCTGATGTG+AGG | 0.723916 | 7_2:-71145600 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATTTAGTTTAATTTTAT+AGG | - | chr7_2:71144860-71144879 | None:intergenic | 10.0% |
| !! | TAAATGTTGAATATAATAAA+CGG | + | chr7_2:71144973-71144992 | Msa1073580:intron | 10.0% |
| !!! | TTCAATTAAAATACATTTTT+GGG | - | chr7_2:71145182-71145201 | None:intergenic | 10.0% |
| !!! | TTTCAATTAAAATACATTTT+TGG | - | chr7_2:71145183-71145202 | None:intergenic | 10.0% |
| !!! | AAAAATGTATTTTAATTGAA+AGG | + | chr7_2:71145182-71145201 | Msa1073580:intron | 10.0% |
| !!! | AACATTTAGTTTAATTTTAT+AGG | - | chr7_2:71144860-71144879 | None:intergenic | 10.0% |
| !! | TAAATGTTGAATATAATAAA+CGG | + | chr7_2:71144973-71144992 | Msa1073580:intron | 10.0% |
| !!! | TTCAATTAAAATACATTTTT+GGG | - | chr7_2:71145182-71145201 | None:intergenic | 10.0% |
| !!! | TTTCAATTAAAATACATTTT+TGG | - | chr7_2:71145183-71145202 | None:intergenic | 10.0% |
| !!! | AAAAATGTATTTTAATTGAA+AGG | + | chr7_2:71145182-71145201 | Msa1073580:intron | 10.0% |
| !! | AACAAAAACTTATTCATATT+TGG | + | chr7_2:71144399-71144418 | Msa1073580:intron | 15.0% |
| !! | GTTTATTATGAAAAAATGTA+GGG | + | chr7_2:71144785-71144804 | Msa1073580:intron | 15.0% |
| !! | TCAAAATTCGTTATATTTAT+GGG | - | chr7_2:71144829-71144848 | None:intergenic | 15.0% |
| !! | ATCAAAATTCGTTATATTTA+TGG | - | chr7_2:71144830-71144849 | None:intergenic | 15.0% |
| !! | ACAAAATAAAAAAATTTGTG+AGG | - | chr7_2:71145079-71145098 | None:intergenic | 15.0% |
| !!! | CCATTTTATATTCATATAAA+TGG | - | chr7_2:71145043-71145062 | None:intergenic | 15.0% |
| !! | CCATTTATATGAATATAAAA+TGG | + | chr7_2:71145040-71145059 | Msa1073580:intron | 15.0% |
| !! | ACAAAATAAAAAAATTTGTG+AGG | + | chr7_2:71145079-71145098 | Msa1073580:intron | 15.0% |
| !!! | AACATTCAGTTTAAATTTTT+AGG | + | chr7_2:71145107-71145126 | Msa1073580:intron | 15.0% |
| !!! | ACATTCAGTTTAAATTTTTA+GGG | + | chr7_2:71145108-71145127 | Msa1073580:intron | 15.0% |
| !! | AAAAATGTACATACTATAAT+TGG | + | chr7_2:71145273-71145292 | Msa1073580:intron | 15.0% |
| !! | AACAAAAACTTATTCATATT+TGG | + | chr7_2:71144399-71144418 | Msa1073580:intron | 15.0% |
| !! | GTTTATTATGAAAAAATGTA+GGG | + | chr7_2:71144785-71144804 | Msa1073580:intron | 15.0% |
| !! | TCAAAATTCGTTATATTTAT+GGG | - | chr7_2:71144829-71144848 | None:intergenic | 15.0% |
| !! | ATCAAAATTCGTTATATTTA+TGG | - | chr7_2:71144830-71144849 | None:intergenic | 15.0% |
| !! | ACAAAATAAAAAAATTTGTG+AGG | - | chr7_2:71145079-71145098 | None:intergenic | 15.0% |
| !!! | CCATTTTATATTCATATAAA+TGG | - | chr7_2:71145043-71145062 | None:intergenic | 15.0% |
| !! | CCATTTATATGAATATAAAA+TGG | + | chr7_2:71145040-71145059 | Msa1073580:intron | 15.0% |
| !! | ACAAAATAAAAAAATTTGTG+AGG | + | chr7_2:71145079-71145098 | Msa1073580:intron | 15.0% |
| !!! | AACATTCAGTTTAAATTTTT+AGG | + | chr7_2:71145107-71145126 | Msa1073580:intron | 15.0% |
| !!! | ACATTCAGTTTAAATTTTTA+GGG | + | chr7_2:71145108-71145127 | Msa1073580:intron | 15.0% |
| !! | AAAAATGTACATACTATAAT+TGG | + | chr7_2:71145273-71145292 | Msa1073580:intron | 15.0% |
| !! | CTACAAAATGTAGAATATTA+AGG | + | chr7_2:71144185-71144204 | Msa1073580:intron | 20.0% |
| !! | AATGTAGAATATTAAGGTAT+TGG | + | chr7_2:71144191-71144210 | Msa1073580:intron | 20.0% |
| !!! | TAAGTTTTTGTTATGTCTAA+AGG | - | chr7_2:71144391-71144410 | None:intergenic | 20.0% |
| !! | ATTAAGTATAACAATTCTTG+TGG | + | chr7_2:71144583-71144602 | Msa1073580:intron | 20.0% |
| !!! | AATCTCAAGTATTGATTATA+AGG | + | chr7_2:71144632-71144651 | Msa1073580:intron | 20.0% |
| !! | TTGGAACAAATTCTTATAAA+AGG | - | chr7_2:71144758-71144777 | None:intergenic | 20.0% |
| !! | GGTTTATTATGAAAAAATGT+AGG | + | chr7_2:71144784-71144803 | Msa1073580:intron | 20.0% |
| !! | CAAAATTCGTTATATTTATG+GGG | - | chr7_2:71144828-71144847 | None:intergenic | 20.0% |
| !! | TGAATATAAAATGGTCATTA+AGG | + | chr7_2:71145049-71145068 | Msa1073580:intron | 20.0% |
| !! | CAAAATTCGCTATATTTATA+AGG | + | chr7_2:71145139-71145158 | Msa1073580:intron | 20.0% |
| !!! | TGAAAGGTTTTTTTCTTAAA+AGG | + | chr7_2:71145198-71145217 | Msa1073580:intron | 20.0% |
| !! | TATATACTGTCAACTAAATT+TGG | - | chr7_2:71145422-71145441 | None:intergenic | 20.0% |
| !! | CTACAAAATGTAGAATATTA+AGG | + | chr7_2:71144185-71144204 | Msa1073580:intron | 20.0% |
| !! | AATGTAGAATATTAAGGTAT+TGG | + | chr7_2:71144191-71144210 | Msa1073580:intron | 20.0% |
| !!! | TAAGTTTTTGTTATGTCTAA+AGG | - | chr7_2:71144391-71144410 | None:intergenic | 20.0% |
| !! | ATTAAGTATAACAATTCTTG+TGG | + | chr7_2:71144583-71144602 | Msa1073580:intron | 20.0% |
| !!! | AATCTCAAGTATTGATTATA+AGG | + | chr7_2:71144632-71144651 | Msa1073580:intron | 20.0% |
| !! | TTGGAACAAATTCTTATAAA+AGG | - | chr7_2:71144758-71144777 | None:intergenic | 20.0% |
| !! | GGTTTATTATGAAAAAATGT+AGG | + | chr7_2:71144784-71144803 | Msa1073580:intron | 20.0% |
| !! | CAAAATTCGTTATATTTATG+GGG | - | chr7_2:71144828-71144847 | None:intergenic | 20.0% |
| !! | TGAATATAAAATGGTCATTA+AGG | + | chr7_2:71145049-71145068 | Msa1073580:intron | 20.0% |
| !! | CAAAATTCGCTATATTTATA+AGG | + | chr7_2:71145139-71145158 | Msa1073580:intron | 20.0% |
| !!! | TGAAAGGTTTTTTTCTTAAA+AGG | + | chr7_2:71145198-71145217 | Msa1073580:intron | 20.0% |
| !! | TATATACTGTCAACTAAATT+TGG | - | chr7_2:71145422-71145441 | None:intergenic | 20.0% |
| ! | GAACAGAAAAATTTATCGAA+TGG | + | chr7_2:71144323-71144342 | Msa1073580:CDS | 25.0% |
| ! | AACTTATTCATATTTGGCTA+AGG | + | chr7_2:71144405-71144424 | Msa1073580:intron | 25.0% |
| !!! | ATTTTTGAAGATCATAGAAG+TGG | + | chr7_2:71144484-71144503 | Msa1073580:CDS | 25.0% |
| ! | TTCATAATAAACCTTTCACT+TGG | - | chr7_2:71144777-71144796 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCGTCCTTAA+TGG | + | chr7_2:71144901-71144920 | Msa1073580:intron | 25.0% |
| ! | CGTCAAAATTATATCCATTA+AGG | - | chr7_2:71144918-71144937 | None:intergenic | 25.0% |
| ! | TATAATAAACGGACATAACA+TGG | + | chr7_2:71144984-71145003 | Msa1073580:intron | 25.0% |
| ! | TTTATGTTCATCTATTGTTG+TGG | - | chr7_2:71145358-71145377 | None:intergenic | 25.0% |
| ! | TATAGCATAAACTTGAGTTT+AGG | - | chr7_2:71145386-71145405 | None:intergenic | 25.0% |
| ! | ATTTCTATAACGAGATTTGA+GGG | - | chr7_2:71145567-71145586 | None:intergenic | 25.0% |
| ! | GAACAGAAAAATTTATCGAA+TGG | + | chr7_2:71144323-71144342 | Msa1073580:CDS | 25.0% |
| ! | AACTTATTCATATTTGGCTA+AGG | + | chr7_2:71144405-71144424 | Msa1073580:intron | 25.0% |
| !!! | ATTTTTGAAGATCATAGAAG+TGG | + | chr7_2:71144484-71144503 | Msa1073580:CDS | 25.0% |
| ! | TTCATAATAAACCTTTCACT+TGG | - | chr7_2:71144777-71144796 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCGTCCTTAA+TGG | + | chr7_2:71144901-71144920 | Msa1073580:intron | 25.0% |
| ! | CGTCAAAATTATATCCATTA+AGG | - | chr7_2:71144918-71144937 | None:intergenic | 25.0% |
| ! | TATAATAAACGGACATAACA+TGG | + | chr7_2:71144984-71145003 | Msa1073580:intron | 25.0% |
| ! | TTTATGTTCATCTATTGTTG+TGG | - | chr7_2:71145358-71145377 | None:intergenic | 25.0% |
| ! | TATAGCATAAACTTGAGTTT+AGG | - | chr7_2:71145386-71145405 | None:intergenic | 25.0% |
| ! | ATTTCTATAACGAGATTTGA+GGG | - | chr7_2:71145567-71145586 | None:intergenic | 25.0% |
| ! | GTTTTCCTGACAACATAAAA+CGG | + | chr7_2:71144263-71144282 | Msa1073580:CDS | 30.0% |
| AATGGATGCTAAAATATCCT+TGG | + | chr7_2:71144341-71144360 | Msa1073580:CDS | 30.0% | |
| ATGCTAAAATATCCTTGGAT+AGG | + | chr7_2:71144346-71144365 | Msa1073580:CDS | 30.0% | |
| AAATATCCTTGGATAGGAAA+AGG | + | chr7_2:71144352-71144371 | Msa1073580:CDS | 30.0% | |
| AATATCCTTGGATAGGAAAA+GGG | + | chr7_2:71144353-71144372 | Msa1073580:CDS | 30.0% | |
| ATCATAGAAGTGGTAATAGA+AGG | + | chr7_2:71144494-71144513 | Msa1073580:CDS | 30.0% | |
| TAATAGAAGGTCTATTAGTG+AGG | + | chr7_2:71144507-71144526 | Msa1073580:CDS | 30.0% | |
| ! | AAGAATTTGTTCCAAGTGAA+AGG | + | chr7_2:71144763-71144782 | Msa1073580:intron | 30.0% |
| GATTTCTATAACGAGATTTG+AGG | - | chr7_2:71145568-71145587 | None:intergenic | 30.0% | |
| ! | GTTTTCCTGACAACATAAAA+CGG | + | chr7_2:71144263-71144282 | Msa1073580:CDS | 30.0% |
| AATGGATGCTAAAATATCCT+TGG | + | chr7_2:71144341-71144360 | Msa1073580:CDS | 30.0% | |
| ATGCTAAAATATCCTTGGAT+AGG | + | chr7_2:71144346-71144365 | Msa1073580:CDS | 30.0% | |
| AAATATCCTTGGATAGGAAA+AGG | + | chr7_2:71144352-71144371 | Msa1073580:CDS | 30.0% | |
| AATATCCTTGGATAGGAAAA+GGG | + | chr7_2:71144353-71144372 | Msa1073580:CDS | 30.0% | |
| ATCATAGAAGTGGTAATAGA+AGG | + | chr7_2:71144494-71144513 | Msa1073580:CDS | 30.0% | |
| TAATAGAAGGTCTATTAGTG+AGG | + | chr7_2:71144507-71144526 | Msa1073580:CDS | 30.0% | |
| ! | AAGAATTTGTTCCAAGTGAA+AGG | + | chr7_2:71144763-71144782 | Msa1073580:intron | 30.0% |
| GATTTCTATAACGAGATTTG+AGG | - | chr7_2:71145568-71145587 | None:intergenic | 30.0% | |
| TTTATGTTGTCAGGAAAACC+TGG | - | chr7_2:71144262-71144281 | None:intergenic | 35.0% | |
| TCATATTTGGCTAAGGTGAA+AGG | + | chr7_2:71144412-71144431 | Msa1073580:intron | 35.0% | |
| CATATTTGGCTAAGGTGAAA+GGG | + | chr7_2:71144413-71144432 | Msa1073580:intron | 35.0% | |
| TTGTTATCAGTTTGTAGTGG+TGG | - | chr7_2:71145318-71145337 | None:intergenic | 35.0% | |
| ! | GCTTTGTTATCAGTTTGTAG+TGG | - | chr7_2:71145321-71145340 | None:intergenic | 35.0% |
| CTATTGTTGTGGAGTTTCTT+AGG | - | chr7_2:71145347-71145366 | None:intergenic | 35.0% | |
| AGGAAGTAAGAAGATGACAT+AGG | - | chr7_2:71145481-71145500 | None:intergenic | 35.0% | |
| ! | CAGCAGTTTTCATATTTGTG+TGG | - | chr7_2:71145653-71145672 | None:intergenic | 35.0% |
| ATATGAAAACTGCTGACACA+TGG | + | chr7_2:71145658-71145677 | Msa1073580:CDS | 35.0% | |
| ATGATAGAGAGAATTCAGAG+AGG | + | chr7_2:71145681-71145700 | Msa1073580:CDS | 35.0% | |
| TTTATGTTGTCAGGAAAACC+TGG | - | chr7_2:71144262-71144281 | None:intergenic | 35.0% | |
| TCATATTTGGCTAAGGTGAA+AGG | + | chr7_2:71144412-71144431 | Msa1073580:intron | 35.0% | |
| CATATTTGGCTAAGGTGAAA+GGG | + | chr7_2:71144413-71144432 | Msa1073580:intron | 35.0% | |
| TTGTTATCAGTTTGTAGTGG+TGG | - | chr7_2:71145318-71145337 | None:intergenic | 35.0% | |
| ! | GCTTTGTTATCAGTTTGTAG+TGG | - | chr7_2:71145321-71145340 | None:intergenic | 35.0% |
| CTATTGTTGTGGAGTTTCTT+AGG | - | chr7_2:71145347-71145366 | None:intergenic | 35.0% | |
| AGGAAGTAAGAAGATGACAT+AGG | - | chr7_2:71145481-71145500 | None:intergenic | 35.0% | |
| ! | CAGCAGTTTTCATATTTGTG+TGG | - | chr7_2:71145653-71145672 | None:intergenic | 35.0% |
| ATATGAAAACTGCTGACACA+TGG | + | chr7_2:71145658-71145677 | Msa1073580:CDS | 35.0% | |
| ATGATAGAGAGAATTCAGAG+AGG | + | chr7_2:71145681-71145700 | Msa1073580:CDS | 35.0% | |
| GGAGTAGCACTTAGCAAAAA+TGG | + | chr7_2:71144139-71144158 | Msa1073580:intron | 40.0% | |
| TGGTTAGAAACACCTAAAGC+TGG | + | chr7_2:71144211-71144230 | Msa1073580:CDS | 40.0% | |
| AACACCTAAAGCTGGAACAT+TGG | + | chr7_2:71144219-71144238 | Msa1073580:CDS | 40.0% | |
| ACTTCCAATGTTCCAGCTTT+AGG | - | chr7_2:71144226-71144245 | None:intergenic | 40.0% | |
| GAAGTCTTTGCTAATCTACC+AGG | + | chr7_2:71144241-71144260 | Msa1073580:CDS | 40.0% | |
| AACATAAAACGGAGTCCAAG+AGG | + | chr7_2:71144274-71144293 | Msa1073580:CDS | 40.0% | |
| ATTGGCAATTAGGCTAAGTG+AGG | + | chr7_2:71144444-71144463 | Msa1073580:CDS | 40.0% | |
| AAGGTCTATTAGTGAGGTTG+AGG | + | chr7_2:71144513-71144532 | Msa1073580:CDS | 40.0% | |
| TGAGAACTGAGATCTAAGAG+AGG | - | chr7_2:71145501-71145520 | None:intergenic | 40.0% | |
| ACGACGTACTCAAATTCGAA+CGG | - | chr7_2:71145750-71145769 | None:intergenic | 40.0% | |
| ATCCATCACCTTGGATATTC+CGG | - | chr7_2:71145787-71145806 | None:intergenic | 40.0% | |
| GGAGTAGCACTTAGCAAAAA+TGG | + | chr7_2:71144139-71144158 | Msa1073580:intron | 40.0% | |
| TGGTTAGAAACACCTAAAGC+TGG | + | chr7_2:71144211-71144230 | Msa1073580:CDS | 40.0% | |
| AACACCTAAAGCTGGAACAT+TGG | + | chr7_2:71144219-71144238 | Msa1073580:CDS | 40.0% | |
| ACTTCCAATGTTCCAGCTTT+AGG | - | chr7_2:71144226-71144245 | None:intergenic | 40.0% | |
| GAAGTCTTTGCTAATCTACC+AGG | + | chr7_2:71144241-71144260 | Msa1073580:CDS | 40.0% | |
| AACATAAAACGGAGTCCAAG+AGG | + | chr7_2:71144274-71144293 | Msa1073580:CDS | 40.0% | |
| ATTGGCAATTAGGCTAAGTG+AGG | + | chr7_2:71144444-71144463 | Msa1073580:CDS | 40.0% | |
| AAGGTCTATTAGTGAGGTTG+AGG | + | chr7_2:71144513-71144532 | Msa1073580:CDS | 40.0% | |
| TGAGAACTGAGATCTAAGAG+AGG | - | chr7_2:71145501-71145520 | None:intergenic | 40.0% | |
| ACGACGTACTCAAATTCGAA+CGG | - | chr7_2:71145750-71145769 | None:intergenic | 40.0% | |
| ATCCATCACCTTGGATATTC+CGG | - | chr7_2:71145787-71145806 | None:intergenic | 40.0% | |
| ! | GGACTCCGTTTTATGTTGTC+AGG | - | chr7_2:71144271-71144290 | None:intergenic | 45.0% |
| ATAAAACGGAGTCCAAGAGG+AGG | + | chr7_2:71144277-71144296 | Msa1073580:CDS | 45.0% | |
| ! | GAGTCCAAGAGGAGGATTTT+GGG | + | chr7_2:71144285-71144304 | Msa1073580:CDS | 45.0% |
| TCCTTGGATAGGAAAAGGGT+TGG | + | chr7_2:71144357-71144376 | Msa1073580:CDS | 45.0% | |
| ! | ACCAACCCTTTTCCTATCCA+AGG | - | chr7_2:71144361-71144380 | None:intergenic | 45.0% |
| !! | GGAGTACTGGATTGGCAATT+AGG | + | chr7_2:71144434-71144453 | Msa1073580:CDS | 45.0% |
| GCAATTAGGCTAAGTGAGGA+GGG | + | chr7_2:71144448-71144467 | Msa1073580:CDS | 45.0% | |
| AGTGAGGTTGAGGAAAGAGA+TGG | + | chr7_2:71144523-71144542 | Msa1073580:CDS | 45.0% | |
| GTGAGGTTGAGGAAAGAGAT+GGG | + | chr7_2:71144524-71144543 | Msa1073580:CDS | 45.0% | |
| TGAGGTTGAGGAAAGAGATG+GGG | + | chr7_2:71144525-71144544 | Msa1073580:CDS | 45.0% | |
| !! | AGGAAAGAGATGGGGTATTG+TGG | + | chr7_2:71144533-71144552 | Msa1073580:CDS | 45.0% |
| !! | GGAAAGAGATGGGGTATTGT+GGG | + | chr7_2:71144534-71144553 | Msa1073580:CDS | 45.0% |
| ACTCGTGCACTACTTGTGAT+AGG | - | chr7_2:71145251-71145270 | None:intergenic | 45.0% | |
| TATCACAAGTAGTGCACGAG+TGG | + | chr7_2:71145250-71145269 | Msa1073580:intron | 45.0% | |
| AGAACGAGAGGGAATTGTAG+TGG | - | chr7_2:71145450-71145469 | None:intergenic | 45.0% | |
| AGGTTAGAGACAGAACGAGA+GGG | - | chr7_2:71145461-71145480 | None:intergenic | 45.0% | |
| TAGGTTAGAGACAGAACGAG+AGG | - | chr7_2:71145462-71145481 | None:intergenic | 45.0% | |
| AGATTTGAGGGCGATGACAA+TGG | - | chr7_2:71145555-71145574 | None:intergenic | 45.0% | |
| AGAGAATTCAGAGAGGAGAG+AGG | + | chr7_2:71145688-71145707 | Msa1073580:CDS | 45.0% | |
| GAGAATTCAGAGAGGAGAGA+GGG | + | chr7_2:71145689-71145708 | Msa1073580:CDS | 45.0% | |
| CTCAAATTCGAACGGATCGA+AGG | - | chr7_2:71145742-71145761 | None:intergenic | 45.0% | |
| CTTGGATATTCCGGTGACAT+TGG | - | chr7_2:71145778-71145797 | None:intergenic | 45.0% | |
| CAATGTCACCGGAATATCCA+AGG | + | chr7_2:71145776-71145795 | Msa1073580:CDS | 45.0% | |
| TCAACTTCGATCCATCACCT+TGG | - | chr7_2:71145796-71145815 | None:intergenic | 45.0% | |
| ! | GGACTCCGTTTTATGTTGTC+AGG | - | chr7_2:71144271-71144290 | None:intergenic | 45.0% |
| ATAAAACGGAGTCCAAGAGG+AGG | + | chr7_2:71144277-71144296 | Msa1073580:CDS | 45.0% | |
| ! | GAGTCCAAGAGGAGGATTTT+GGG | + | chr7_2:71144285-71144304 | Msa1073580:CDS | 45.0% |
| TCCTTGGATAGGAAAAGGGT+TGG | + | chr7_2:71144357-71144376 | Msa1073580:CDS | 45.0% | |
| ! | ACCAACCCTTTTCCTATCCA+AGG | - | chr7_2:71144361-71144380 | None:intergenic | 45.0% |
| !! | GGAGTACTGGATTGGCAATT+AGG | + | chr7_2:71144434-71144453 | Msa1073580:CDS | 45.0% |
| GCAATTAGGCTAAGTGAGGA+GGG | + | chr7_2:71144448-71144467 | Msa1073580:CDS | 45.0% | |
| AGTGAGGTTGAGGAAAGAGA+TGG | + | chr7_2:71144523-71144542 | Msa1073580:CDS | 45.0% | |
| GTGAGGTTGAGGAAAGAGAT+GGG | + | chr7_2:71144524-71144543 | Msa1073580:CDS | 45.0% | |
| TGAGGTTGAGGAAAGAGATG+GGG | + | chr7_2:71144525-71144544 | Msa1073580:CDS | 45.0% | |
| !! | AGGAAAGAGATGGGGTATTG+TGG | + | chr7_2:71144533-71144552 | Msa1073580:CDS | 45.0% |
| !! | GGAAAGAGATGGGGTATTGT+GGG | + | chr7_2:71144534-71144553 | Msa1073580:CDS | 45.0% |
| ACTCGTGCACTACTTGTGAT+AGG | - | chr7_2:71145251-71145270 | None:intergenic | 45.0% | |
| TATCACAAGTAGTGCACGAG+TGG | + | chr7_2:71145250-71145269 | Msa1073580:intron | 45.0% | |
| AGAACGAGAGGGAATTGTAG+TGG | - | chr7_2:71145450-71145469 | None:intergenic | 45.0% | |
| AGGTTAGAGACAGAACGAGA+GGG | - | chr7_2:71145461-71145480 | None:intergenic | 45.0% | |
| TAGGTTAGAGACAGAACGAG+AGG | - | chr7_2:71145462-71145481 | None:intergenic | 45.0% | |
| AGATTTGAGGGCGATGACAA+TGG | - | chr7_2:71145555-71145574 | None:intergenic | 45.0% | |
| AGAGAATTCAGAGAGGAGAG+AGG | + | chr7_2:71145688-71145707 | Msa1073580:CDS | 45.0% | |
| GAGAATTCAGAGAGGAGAGA+GGG | + | chr7_2:71145689-71145708 | Msa1073580:CDS | 45.0% | |
| CTCAAATTCGAACGGATCGA+AGG | - | chr7_2:71145742-71145761 | None:intergenic | 45.0% | |
| CTTGGATATTCCGGTGACAT+TGG | - | chr7_2:71145778-71145797 | None:intergenic | 45.0% | |
| CAATGTCACCGGAATATCCA+AGG | + | chr7_2:71145776-71145795 | Msa1073580:CDS | 45.0% | |
| TCAACTTCGATCCATCACCT+TGG | - | chr7_2:71145796-71145815 | None:intergenic | 45.0% | |
| ! | GGAGTCCAAGAGGAGGATTT+TGG | + | chr7_2:71144284-71144303 | Msa1073580:CDS | 50.0% |
| CCAACCCAAAATCCTCCTCT+TGG | - | chr7_2:71144292-71144311 | None:intergenic | 50.0% | |
| !! | CCAAGAGGAGGATTTTGGGT+TGG | + | chr7_2:71144289-71144308 | Msa1073580:CDS | 50.0% |
| ! | GCTAAGGTGAAAGGGAGTAC+TGG | + | chr7_2:71144421-71144440 | Msa1073580:intron | 50.0% |
| !! | GGTGAAAGGGAGTACTGGAT+TGG | + | chr7_2:71144426-71144445 | Msa1073580:intron | 50.0% |
| GGCAATTAGGCTAAGTGAGG+AGG | + | chr7_2:71144447-71144466 | Msa1073580:CDS | 50.0% | |
| AAGTGAGGAGGGTGATGTGT+TGG | + | chr7_2:71144459-71144478 | Msa1073580:CDS | 50.0% | |
| !! | AGAGATGGGGTATTGTGGGT+TGG | + | chr7_2:71144538-71144557 | Msa1073580:CDS | 50.0% |
| TTTGAGGGCGATGACAATGG+TGG | - | chr7_2:71145552-71145571 | None:intergenic | 50.0% | |
| ! | CGTTTGGTGAGTCTGATGTG+AGG | - | chr7_2:71145603-71145622 | None:intergenic | 50.0% |
| ! | ATTTGTGTGGCTTGCGACGA+TGG | - | chr7_2:71145640-71145659 | None:intergenic | 50.0% |
| GGATCGAAGGTCAAAGACGA+TGG | - | chr7_2:71145729-71145748 | None:intergenic | 50.0% | |
| GTCGTTGTCACCAATGTCAC+CGG | + | chr7_2:71145765-71145784 | Msa1073580:CDS | 50.0% | |
| CACCGGAATATCCAAGGTGA+TGG | + | chr7_2:71145782-71145801 | Msa1073580:CDS | 50.0% | |
| ! | GGAGTCCAAGAGGAGGATTT+TGG | + | chr7_2:71144284-71144303 | Msa1073580:CDS | 50.0% |
| CCAACCCAAAATCCTCCTCT+TGG | - | chr7_2:71144292-71144311 | None:intergenic | 50.0% | |
| !! | CCAAGAGGAGGATTTTGGGT+TGG | + | chr7_2:71144289-71144308 | Msa1073580:CDS | 50.0% |
| ! | GCTAAGGTGAAAGGGAGTAC+TGG | + | chr7_2:71144421-71144440 | Msa1073580:intron | 50.0% |
| !! | GGTGAAAGGGAGTACTGGAT+TGG | + | chr7_2:71144426-71144445 | Msa1073580:intron | 50.0% |
| GGCAATTAGGCTAAGTGAGG+AGG | + | chr7_2:71144447-71144466 | Msa1073580:CDS | 50.0% | |
| AAGTGAGGAGGGTGATGTGT+TGG | + | chr7_2:71144459-71144478 | Msa1073580:CDS | 50.0% | |
| !! | AGAGATGGGGTATTGTGGGT+TGG | + | chr7_2:71144538-71144557 | Msa1073580:CDS | 50.0% |
| TTTGAGGGCGATGACAATGG+TGG | - | chr7_2:71145552-71145571 | None:intergenic | 50.0% | |
| ! | CGTTTGGTGAGTCTGATGTG+AGG | - | chr7_2:71145603-71145622 | None:intergenic | 50.0% |
| ! | ATTTGTGTGGCTTGCGACGA+TGG | - | chr7_2:71145640-71145659 | None:intergenic | 50.0% |
| GGATCGAAGGTCAAAGACGA+TGG | - | chr7_2:71145729-71145748 | None:intergenic | 50.0% | |
| GTCGTTGTCACCAATGTCAC+CGG | + | chr7_2:71145765-71145784 | Msa1073580:CDS | 50.0% | |
| CACCGGAATATCCAAGGTGA+TGG | + | chr7_2:71145782-71145801 | Msa1073580:CDS | 50.0% | |
| !! | GATGACAATGGTGGCGGCGA+CGG | - | chr7_2:71145543-71145562 | None:intergenic | 60.0% |
| GAGGGCGATGACAATGGTGG+CGG | - | chr7_2:71145549-71145568 | None:intergenic | 60.0% | |
| !! | TTGCGACGATGGTGGTGGAC+GGG | - | chr7_2:71145629-71145648 | None:intergenic | 60.0% |
| !! | CTTGCGACGATGGTGGTGGA+CGG | - | chr7_2:71145630-71145649 | None:intergenic | 60.0% |
| ! | TGTGTGGCTTGCGACGATGG+TGG | - | chr7_2:71145637-71145656 | None:intergenic | 60.0% |
| !! | GATGACAATGGTGGCGGCGA+CGG | - | chr7_2:71145543-71145562 | None:intergenic | 60.0% |
| GAGGGCGATGACAATGGTGG+CGG | - | chr7_2:71145549-71145568 | None:intergenic | 60.0% | |
| !! | TTGCGACGATGGTGGTGGAC+GGG | - | chr7_2:71145629-71145648 | None:intergenic | 60.0% |
| !! | CTTGCGACGATGGTGGTGGA+CGG | - | chr7_2:71145630-71145649 | None:intergenic | 60.0% |
| ! | TGTGTGGCTTGCGACGATGG+TGG | - | chr7_2:71145637-71145656 | None:intergenic | 60.0% |
| !! | ACAATGGTGGCGGCGACGGA+TGG | - | chr7_2:71145539-71145558 | None:intergenic | 65.0% |
| !! | TGCGACGATGGTGGTGGACG+GGG | - | chr7_2:71145628-71145647 | None:intergenic | 65.0% |
| ! | GTGGCTTGCGACGATGGTGG+TGG | - | chr7_2:71145634-71145653 | None:intergenic | 65.0% |
| !! | ACAATGGTGGCGGCGACGGA+TGG | - | chr7_2:71145539-71145558 | None:intergenic | 65.0% |
| !! | TGCGACGATGGTGGTGGACG+GGG | - | chr7_2:71145628-71145647 | None:intergenic | 65.0% |
| ! | GTGGCTTGCGACGATGGTGG+TGG | - | chr7_2:71145634-71145653 | None:intergenic | 65.0% |
| !! | CGACGATGGTGGTGGACGGG+GGG | - | chr7_2:71145626-71145645 | None:intergenic | 70.0% |
| !! | GCGACGATGGTGGTGGACGG+GGG | - | chr7_2:71145627-71145646 | None:intergenic | 70.0% |
| !! | CGACGATGGTGGTGGACGGG+GGG | - | chr7_2:71145626-71145645 | None:intergenic | 70.0% |
| !! | GCGACGATGGTGGTGGACGG+GGG | - | chr7_2:71145627-71145646 | None:intergenic | 70.0% |
| GTGGCGGCGACGGATGGTCG+TGG | - | chr7_2:71145533-71145552 | None:intergenic | 75.0% | |
| !! | GGTGGTGGACGGGGGGCGTT+TGG | - | chr7_2:71145619-71145638 | None:intergenic | 75.0% |
| GTGGCGGCGACGGATGGTCG+TGG | - | chr7_2:71145533-71145552 | None:intergenic | 75.0% | |
| !! | GGTGGTGGACGGGGGGCGTT+TGG | - | chr7_2:71145619-71145638 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 71144137 | 71145815 | 71144137 | ID=Msa1073580;Name=Msa1073580 |
| chr7_2 | mRNA | 71144137 | 71145815 | 71144137 | ID=Msa1073580-mRNA-1;Parent=Msa1073580;Name=Msa1073580-mRNA-1;_AED=0.73;_eAED=0.74;_QI=0|0|0|0.75|1|1|4|0|239 |
| chr7_2 | exon | 71144137 | 71144141 | 71144137 | ID=Msa1073580-mRNA-1:exon:16115;Parent=Msa1073580-mRNA-1 |
| chr7_2 | exon | 71144198 | 71144378 | 71144198 | ID=Msa1073580-mRNA-1:exon:16116;Parent=Msa1073580-mRNA-1 |
| chr7_2 | exon | 71144427 | 71144587 | 71144427 | ID=Msa1073580-mRNA-1:exon:16117;Parent=Msa1073580-mRNA-1 |
| chr7_2 | exon | 71145443 | 71145815 | 71145443 | ID=Msa1073580-mRNA-1:exon:16118;Parent=Msa1073580-mRNA-1 |
| chr7_2 | CDS | 71144137 | 71144141 | 71144137 | ID=Msa1073580-mRNA-1:cds;Parent=Msa1073580-mRNA-1 |
| chr7_2 | CDS | 71144198 | 71144378 | 71144198 | ID=Msa1073580-mRNA-1:cds;Parent=Msa1073580-mRNA-1 |
| chr7_2 | CDS | 71144427 | 71144587 | 71144427 | ID=Msa1073580-mRNA-1:cds;Parent=Msa1073580-mRNA-1 |
| chr7_2 | CDS | 71145443 | 71145815 | 71145443 | ID=Msa1073580-mRNA-1:cds;Parent=Msa1073580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
