AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807730 MtrunA17_Chr0c01g0489461 93.187 411 7 1 12 422 9 398 0.0 783
Msa0807730 MtrunA17_Chr3g0132471 42.169 249 100 7 179 416 97 312 1.75e-49 170
Msa0807730 MtrunA17_Chr1g0191571 43.043 230 99 5 191 416 129 330 2.09e-48 168
Msa0807730 MtrunA17_Chr7g0273081 41.296 247 109 7 180 422 98 312 9.21e-47 163
Msa0807730 MtrunA17_Chr8g0345871 48.707 232 79 5 187 417 170 362 1.68e-46 164
Msa0807730 MtrunA17_Chr8g0366551 37.874 301 115 9 153 422 60 319 2.19e-46 162
Msa0807730 MtrunA17_Chr2g0287761 41.014 217 97 3 198 414 1 186 8.11e-43 149
Msa0807730 MtrunA17_Chr1g0158941 35.223 247 128 2 176 411 65 290 5.45e-42 150
Msa0807730 MtrunA17_Chr5g0426851 40.084 237 112 7 179 412 79 288 1.14e-41 149
Msa0807730 MtrunA17_Chr3g0126381 35.052 194 93 4 251 411 4 197 4.11e-27 107
Msa0807730 MtrunA17_Chr8g0366751 25.600 250 134 10 173 418 439 640 2.95e-13 71.6
Msa0807730 MtrunA17_Chr3g0126361 45.556 90 37 3 155 232 46 135 7.91e-13 65.9
Msa0807730 MtrunA17_Chr5g0411341 24.370 238 130 7 173 404 470 663 4.16e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807730 AT3G24140.2 56.706 425 104 13 45 422 11 402 3.21e-133 389
Msa0807730 AT3G24140.1 56.471 425 105 13 45 422 11 402 1.95e-132 387
Msa0807730 AT3G06120.1 39.910 223 100 4 198 416 1 193 5.00e-43 150
Msa0807730 AT1G72210.1 39.241 237 110 4 188 422 115 319 1.01e-42 153
Msa0807730 AT1G22490.1 39.744 234 106 5 188 420 105 304 1.45e-42 152
Msa0807730 AT1G22490.2 41.346 208 88 4 187 394 104 277 2.00e-39 144
Msa0807730 AT1G72210.2 39.336 211 89 4 188 394 115 290 4.03e-38 140
Msa0807730 AT2G46810.2 37.333 225 98 4 191 413 114 297 1.01e-35 134
Msa0807730 AT2G46810.3 37.333 225 98 4 191 413 174 357 6.43e-35 133
Msa0807730 AT2G46810.1 37.333 225 98 4 191 413 186 369 6.66e-35 133
Msa0807730 AT4G01460.1 35.776 232 117 4 188 418 105 305 9.86e-35 131
Msa0807730 AT4G01460.2 35.776 232 117 4 188 418 105 305 9.86e-35 131
Msa0807730 AT2G46810.4 39.512 205 82 3 191 394 114 277 1.02e-33 129
Msa0807730 AT5G46690.1 38.367 245 114 5 187 416 77 299 1.11e-33 129
Msa0807730 AT3G61950.2 36.842 228 100 5 188 413 117 302 5.78e-33 126
Msa0807730 AT3G61950.6 38.318 214 89 4 188 400 117 288 8.68e-33 125
Msa0807730 AT3G61950.1 36.842 228 100 5 188 413 168 353 1.83e-32 126
Msa0807730 AT3G61950.3 38.318 214 89 4 188 400 168 339 4.95e-32 125
Msa0807730 AT5G46690.2 39.367 221 98 4 188 394 78 276 1.60e-30 119
Msa0807730 AT5G65320.1 33.617 235 118 5 188 417 92 293 2.31e-26 108
Msa0807730 AT5G65320.2 35.238 210 100 4 188 394 92 268 3.08e-23 99.0
Msa0807730 AT5G53210.2 50.549 91 24 1 196 286 100 169 1.10e-20 93.2
Msa0807730 AT5G53210.2 50.000 74 37 0 324 397 274 347 5.27e-15 76.3
Msa0807730 AT5G53210.1 50.549 91 24 1 196 286 100 169 1.62e-20 92.8
Msa0807730 AT5G53210.1 46.591 88 47 0 324 411 274 361 3.20e-18 86.3
Msa0807730 AT3G61950.4 62.500 48 18 0 188 235 168 215 3.30e-13 68.9
Msa0807730 AT3G61950.5 62.500 48 18 0 188 235 168 215 3.30e-13 68.9
Msa0807730 AT4G17880.1 25.200 250 118 7 156 396 380 569 2.98e-12 68.9
Msa0807730 AT1G32640.1 24.060 266 127 8 140 395 405 605 7.06e-12 67.8

Find 88 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGATTCTTCGCGGTTTA+AGG 0.091676 5_3:+30962681 None:intergenic
GTGATGCAGTTTGCAGATTT+TGG 0.187925 5_3:-30962715 Msa0807730:CDS
GGTGATCAAGCTTCTATAAT+TGG 0.199677 5_3:-30961814 Msa0807730:CDS
TCACTTGTCTTAACAGTTCT+TGG 0.201116 5_3:+30962415 None:intergenic
GAAGCACAATCAAAACAAAT+TGG 0.265257 5_3:-30961712 Msa0807730:CDS
CACCACTCAACATCAAATTT+TGG 0.284583 5_3:+30962602 None:intergenic
TCCTCAAACACAAGTTGTTT+GGG 0.291339 5_3:-30962089 Msa0807730:CDS
CCTCCTGAAGTTTGTGTTTG+AGG 0.310661 5_3:+30962781 None:intergenic
TCGCGGTTTAAGGCTAATTT+AGG 0.318430 5_3:+30962691 None:intergenic
CCTATAGTACTCTTGTCATT+TGG 0.326217 5_3:-30961047 Msa0807730:three_prime_UTR
GTCCTCAAACACAAGTTGTT+TGG 0.330696 5_3:-30962090 Msa0807730:CDS
GTAGAAAGAGGCTTCTAGTA+TGG 0.336451 5_3:+30961020 None:intergenic
GTGATCAAGCTTCTATAATT+GGG 0.350819 5_3:-30961813 Msa0807730:CDS
ACTAGCTTCATCTGGTCATT+TGG 0.371823 5_3:+30961634 None:intergenic
CCAAATGACAAGAGTACTAT+AGG 0.373583 5_3:+30961047 None:intergenic
CACAATTCATTTGTAGAAAG+AGG 0.374807 5_3:+30961008 None:intergenic
AAGCACAATCAAAACAAATT+GGG 0.380451 5_3:-30961711 Msa0807730:CDS
AAGCTAGTTGAGATGGAAAC+TGG 0.382861 5_3:-30961619 Msa0807730:CDS
TATAGAATTTGTGAGGGAAT+TGG 0.383630 5_3:-30961785 Msa0807730:CDS
AACCAGGCATGAGGGATCTA+AGG 0.393915 5_3:+30962314 None:intergenic
GATGTAGAAGTGAAACTTCT+AGG 0.406812 5_3:-30961556 Msa0807730:CDS
GCCTTAAACCGCGAAGAATC+AGG 0.418841 5_3:-30962682 Msa0807730:CDS
CCATCTCAACTAGCTTCATC+TGG 0.419409 5_3:+30961626 None:intergenic
GGAAACTTGAGAAAATAAAT+CGG 0.433203 5_3:+30962649 None:intergenic
TGCTGAAAGTAAGTCATGTT+TGG 0.455013 5_3:-30961581 Msa0807730:CDS
TCTATCTTATTGGTTAAGAC+AGG 0.457469 5_3:+30962628 None:intergenic
TTGAGTGGTGGTGATGGGTT+AGG 0.458608 5_3:-30962589 Msa0807730:CDS
TATCGAGTTGGCGAAACATC+GGG 0.463450 5_3:-30962838 Msa0807730:CDS
GTTCGTATTGTTGTTGCTGT+TGG 0.465123 5_3:+30962872 None:intergenic
ATCCTCTCAAGGAGAAGGCC+TGG 0.465771 5_3:-30961514 Msa0807730:CDS
GTCCTTAGATCCCTCATGCC+TGG 0.466194 5_3:-30962316 Msa0807730:CDS
CAAAAGAGAAGGAGACTACT+AGG 0.474641 5_3:-30961736 Msa0807730:CDS
CCCCAAACAACTTGTGTTTG+AGG 0.477550 5_3:+30962088 None:intergenic
TGGTCATTTGGTAAAGGAGC+TGG 0.494479 5_3:+30961646 None:intergenic
AAGAACTGTCTGTTCAATAG+TGG 0.499927 5_3:+30961426 None:intergenic
TTGATGTTGAGTGGTGGTGA+TGG 0.503048 5_3:-30962595 Msa0807730:CDS
TGTGTTGAAGCTACAAGGTA+TGG 0.505565 5_3:+30962924 None:intergenic
CCAGATGAAGCTAGTTGAGA+TGG 0.511789 5_3:-30961626 Msa0807730:CDS
GCCTGGTTCATACGTGCAAA+GGG 0.513019 5_3:-30962299 Msa0807730:intron
TTCATCTGGTCATTTGGTAA+AGG 0.516461 5_3:+30961640 None:intergenic
GAATGAGATTTATTTAAGAG+AGG 0.518849 5_3:+30960966 None:intergenic
CATGTCTTCAAGAGCAGCAA+TGG 0.521985 5_3:+30961477 None:intergenic
TCTTTATTCTTTCAATGTCA+AGG 0.523113 5_3:-30961407 Msa0807730:intron
GTATCGAGTTGGCGAAACAT+CGG 0.525109 5_3:-30962839 Msa0807730:CDS
TGATGTTGAGTGGTGGTGAT+GGG 0.525956 5_3:-30962594 Msa0807730:CDS
GAAACTTGAGAAAATAAATC+GGG 0.527811 5_3:+30962650 None:intergenic
TGCAAGAGAACAACAAGAAG+AGG 0.529798 5_3:-30962444 Msa0807730:CDS
ATGGTCTTGATCAACTGTCC+AGG 0.530534 5_3:+30961496 None:intergenic
TGCCTGGTTCATACGTGCAA+AGG 0.533937 5_3:-30962300 Msa0807730:CDS
AGCTAGTGATACAAGGTTCA+CGG 0.534009 5_3:-30961188 Msa0807730:CDS
GTCCAGGCCTTCTCCTTGAG+AGG 0.550662 5_3:+30961512 None:intergenic
ACCCTTTGCACGTATGAACC+AGG 0.550812 5_3:+30962298 None:intergenic
TCAAGTGTGTTGAAGCTACA+AGG 0.560312 5_3:+30962919 None:intergenic
CTTCGATACCTGATTCTTCG+CGG 0.569325 5_3:+30962674 None:intergenic
TGAATTGTGTAATCTATCAA+AGG 0.569575 5_3:-30960994 Msa0807730:three_prime_UTR
TTAAAATCCTCTCAAGGAGA+AGG 0.575154 5_3:-30961519 Msa0807730:CDS
GTCTAGAATCACAAAAGAGA+AGG 0.576264 5_3:-30961747 Msa0807730:CDS
AGTTTCTGACGAGAACAACT+CGG 0.576812 5_3:-30962491 Msa0807730:CDS
ATGCCTCAAACACAAACTTC+AGG 0.576898 5_3:-30962784 Msa0807730:CDS
GGGGAGCTATAGAATTTGTG+AGG 0.588962 5_3:-30961792 Msa0807730:CDS
TGACTCACATAGCTGTTGAA+AGG 0.591781 5_3:-30962372 Msa0807730:CDS
AGCACAATCAAAACAAATTG+GGG 0.592351 5_3:-30961710 Msa0807730:CDS
TGATCAAGCTTCTATAATTG+GGG 0.592592 5_3:-30961812 Msa0807730:CDS
GTTGGTGATGATGATGATCA+AGG 0.593143 5_3:+30962890 None:intergenic
TGAAAACAACAACGGAATGG+TGG 0.599929 5_3:-30962815 Msa0807730:CDS
TCCAGGTAGCTAGTGATACA+AGG 0.601551 5_3:-30961195 Msa0807730:intron
GCACGTATGAACCAGGCATG+AGG 0.603673 5_3:+30962305 None:intergenic
CCTCAAACACAAGTTGTTTG+GGG 0.605927 5_3:-30962088 Msa0807730:CDS
CAATGATTAAAATCCTCTCA+AGG 0.606240 5_3:-30961525 Msa0807730:CDS
CACGTATGAACCAGGCATGA+GGG 0.608646 5_3:+30962306 None:intergenic
GACCAAAATTTGATGTTGAG+TGG 0.615025 5_3:-30962604 Msa0807730:CDS
GAGGTTCAAATTGACAAGCG+TGG 0.615809 5_3:-30962554 Msa0807730:CDS
TAGCTGTTGAAAGGAATCGA+AGG 0.623409 5_3:-30962363 Msa0807730:CDS
GGGTGAAAACAACAACGGAA+TGG 0.626152 5_3:-30962818 Msa0807730:CDS
AAAACTTAGTATCTGCTGAA+CGG 0.628856 5_3:+30961147 None:intergenic
CCTCAAACACAAACTTCAGG+AGG 0.642336 5_3:-30962781 Msa0807730:CDS
TAGTGGTGATGTTTGTGTGA+AGG 0.650341 5_3:+30961443 None:intergenic
GGGAGCTATAGAATTTGTGA+GGG 0.652926 5_3:-30961791 Msa0807730:CDS
TTGGTGATGATGATGATCAA+GGG 0.654699 5_3:+30962891 None:intergenic
GTGTTGAAGCTACAAGGTAT+GGG 0.656678 5_3:+30962925 None:intergenic
AAAATTTGAGCAGAACAACA+TGG 0.657106 5_3:+30962966 None:intergenic
CAAAATTTGATGTTGAGTGG+TGG 0.660663 5_3:-30962601 Msa0807730:CDS
CTCAAACACAAGTTGTTTGG+GGG 0.661361 5_3:-30962087 Msa0807730:CDS
GATCAAGCTTCTATAATTGG+GGG 0.684770 5_3:-30961811 Msa0807730:CDS
GTTCAAATTGACAAGCGTGG+AGG 0.694433 5_3:-30962551 Msa0807730:CDS
TTGAAGCTACAAGGTATGGG+TGG 0.705250 5_3:+30962928 None:intergenic
GGTTAGGAGAAAATGACGAG+AGG 0.716694 5_3:-30962573 Msa0807730:CDS
ACATCGGGTGAAAACAACAA+CGG 0.729217 5_3:-30962823 Msa0807730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAAGAAAATC+TGG - chr5_3:30962630-30962649 Msa0807730:CDS 10.0%
!! TAAAAAATAAAAGAAAATCT+GGG - chr5_3:30962631-30962650 Msa0807730:CDS 10.0%
!! ATAAAAAATAAAAGAAAATC+TGG - chr5_3:30962630-30962649 Msa0807730:CDS 10.0%
!! TAAAAAATAAAAGAAAATCT+GGG - chr5_3:30962631-30962650 Msa0807730:CDS 10.0%
!!! GTAACAATAATTTAAAACTT+TGG + chr5_3:30961926-30961945 None:intergenic 15.0%
!!! TAAATTTTAGAGAACAATTA+CGG + chr5_3:30961948-30961967 None:intergenic 15.0%
!!! TGTTTTTGATTTTACAATAT+AGG - chr5_3:30962064-30962083 Msa0807730:CDS 15.0%
!!! GTTTTTGATTTTACAATATA+GGG - chr5_3:30962065-30962084 Msa0807730:CDS 15.0%
!! AAAAAATAAAAGAAAATCTG+GGG - chr5_3:30962632-30962651 Msa0807730:CDS 15.0%
!!! TATTTTATATATATGTTGTG+TGG - chr5_3:30962824-30962843 Msa0807730:CDS 15.0%
!!! GTAACAATAATTTAAAACTT+TGG + chr5_3:30961926-30961945 None:intergenic 15.0%
!!! TAAATTTTAGAGAACAATTA+CGG + chr5_3:30961948-30961967 None:intergenic 15.0%
!!! TGTTTTTGATTTTACAATAT+AGG - chr5_3:30962064-30962083 Msa0807730:CDS 15.0%
!!! GTTTTTGATTTTACAATATA+GGG - chr5_3:30962065-30962084 Msa0807730:CDS 15.0%
!! AAAAAATAAAAGAAAATCTG+GGG - chr5_3:30962632-30962651 Msa0807730:CDS 15.0%
!!! TATTTTATATATATGTTGTG+TGG - chr5_3:30962824-30962843 Msa0807730:CDS 15.0%
!! GAAAAAATGTATGTTATAGT+TGG - chr5_3:30961650-30961669 Msa0807730:CDS 20.0%
!!! AATCTCATTCAATGAATTTT+CGG - chr5_3:30962947-30962966 Msa0807730:CDS 20.0%
!! GAAAAAATGTATGTTATAGT+TGG - chr5_3:30961650-30961669 Msa0807730:CDS 20.0%
!!! AATCTCATTCAATGAATTTT+CGG - chr5_3:30962947-30962966 Msa0807730:CDS 20.0%
! GAAACTTGAGAAAATAAATC+GGG + chr5_3:30961253-30961272 None:intergenic 25.0%
! GGAAACTTGAGAAAATAAAT+CGG + chr5_3:30961254-30961273 None:intergenic 25.0%
!!! ATTTTGGTCTTCTATCTTAT+TGG + chr5_3:30961285-30961304 None:intergenic 25.0%
!!! ATGTTATAGTTGGTGAAATT+TGG - chr5_3:30961660-30961679 Msa0807730:CDS 25.0%
!!! TGTTATAGTTGGTGAAATTT+GGG - chr5_3:30961661-30961680 Msa0807730:CDS 25.0%
! ATTGCACCAAAATTAAACAA+TGG - chr5_3:30961986-30962005 Msa0807730:intron 25.0%
!!! CTCTAACCATTGTTTAATTT+TGG + chr5_3:30961995-30962014 None:intergenic 25.0%
! AAGCACAATCAAAACAAATT+GGG - chr5_3:30962189-30962208 Msa0807730:intron 25.0%
! TCTTTATTCTTTCAATGTCA+AGG - chr5_3:30962493-30962512 Msa0807730:CDS 25.0%
! TGAATTGTGTAATCTATCAA+AGG - chr5_3:30962906-30962925 Msa0807730:CDS 25.0%
! GAATGAGATTTATTTAAGAG+AGG + chr5_3:30962937-30962956 None:intergenic 25.0%
! GAAACTTGAGAAAATAAATC+GGG + chr5_3:30961253-30961272 None:intergenic 25.0%
! GGAAACTTGAGAAAATAAAT+CGG + chr5_3:30961254-30961273 None:intergenic 25.0%
!!! ATTTTGGTCTTCTATCTTAT+TGG + chr5_3:30961285-30961304 None:intergenic 25.0%
!!! ATGTTATAGTTGGTGAAATT+TGG - chr5_3:30961660-30961679 Msa0807730:CDS 25.0%
!!! TGTTATAGTTGGTGAAATTT+GGG - chr5_3:30961661-30961680 Msa0807730:CDS 25.0%
! ATTGCACCAAAATTAAACAA+TGG - chr5_3:30961986-30962005 Msa0807730:intron 25.0%
!!! CTCTAACCATTGTTTAATTT+TGG + chr5_3:30961995-30962014 None:intergenic 25.0%
! AAGCACAATCAAAACAAATT+GGG - chr5_3:30962189-30962208 Msa0807730:intron 25.0%
! TCTTTATTCTTTCAATGTCA+AGG - chr5_3:30962493-30962512 Msa0807730:CDS 25.0%
! TGAATTGTGTAATCTATCAA+AGG - chr5_3:30962906-30962925 Msa0807730:CDS 25.0%
! GAATGAGATTTATTTAAGAG+AGG + chr5_3:30962937-30962956 None:intergenic 25.0%
! CTCAAATTTTGAATCTTTGC+AGG - chr5_3:30960947-30960966 Msa0807730:three_prime_UTR 30.0%
! TCTATCTTATTGGTTAAGAC+AGG + chr5_3:30961275-30961294 None:intergenic 30.0%
!! GTTATAGTTGGTGAAATTTG+GGG - chr5_3:30961662-30961681 Msa0807730:CDS 30.0%
TGATACCATGTTGAAATTTG+GGG + chr5_3:30961728-30961747 None:intergenic 30.0%
CTGATACCATGTTGAAATTT+GGG + chr5_3:30961729-30961748 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG + chr5_3:30961730-30961749 None:intergenic 30.0%
AAATGTGTCCTTGATTTCTA+AGG + chr5_3:30961884-30961903 None:intergenic 30.0%
GTGATCAAGCTTCTATAATT+GGG - chr5_3:30962087-30962106 Msa0807730:CDS 30.0%
TGATCAAGCTTCTATAATTG+GGG - chr5_3:30962088-30962107 Msa0807730:CDS 30.0%
TATAGAATTTGTGAGGGAAT+TGG - chr5_3:30962115-30962134 Msa0807730:intron 30.0%
GAAGCACAATCAAAACAAAT+TGG - chr5_3:30962188-30962207 Msa0807730:intron 30.0%
AGCACAATCAAAACAAATTG+GGG - chr5_3:30962190-30962209 Msa0807730:intron 30.0%
CAATGATTAAAATCCTCTCA+AGG - chr5_3:30962375-30962394 Msa0807730:CDS 30.0%
TTCAATGTCAAGGTATATTC+AGG - chr5_3:30962503-30962522 Msa0807730:CDS 30.0%
TCAATGTCAAGGTATATTCA+GGG - chr5_3:30962504-30962523 Msa0807730:CDS 30.0%
AAAACTTAGTATCTGCTGAA+CGG + chr5_3:30962756-30962775 None:intergenic 30.0%
CACAATTCATTTGTAGAAAG+AGG + chr5_3:30962895-30962914 None:intergenic 30.0%
! CTCAAATTTTGAATCTTTGC+AGG - chr5_3:30960947-30960966 Msa0807730:three_prime_UTR 30.0%
! TCTATCTTATTGGTTAAGAC+AGG + chr5_3:30961275-30961294 None:intergenic 30.0%
!! GTTATAGTTGGTGAAATTTG+GGG - chr5_3:30961662-30961681 Msa0807730:CDS 30.0%
TGATACCATGTTGAAATTTG+GGG + chr5_3:30961728-30961747 None:intergenic 30.0%
CTGATACCATGTTGAAATTT+GGG + chr5_3:30961729-30961748 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG + chr5_3:30961730-30961749 None:intergenic 30.0%
AAATGTGTCCTTGATTTCTA+AGG + chr5_3:30961884-30961903 None:intergenic 30.0%
GTGATCAAGCTTCTATAATT+GGG - chr5_3:30962087-30962106 Msa0807730:CDS 30.0%
TGATCAAGCTTCTATAATTG+GGG - chr5_3:30962088-30962107 Msa0807730:CDS 30.0%
TATAGAATTTGTGAGGGAAT+TGG - chr5_3:30962115-30962134 Msa0807730:intron 30.0%
GAAGCACAATCAAAACAAAT+TGG - chr5_3:30962188-30962207 Msa0807730:intron 30.0%
AGCACAATCAAAACAAATTG+GGG - chr5_3:30962190-30962209 Msa0807730:intron 30.0%
CAATGATTAAAATCCTCTCA+AGG - chr5_3:30962375-30962394 Msa0807730:CDS 30.0%
TTCAATGTCAAGGTATATTC+AGG - chr5_3:30962503-30962522 Msa0807730:CDS 30.0%
TCAATGTCAAGGTATATTCA+GGG - chr5_3:30962504-30962523 Msa0807730:CDS 30.0%
AAAACTTAGTATCTGCTGAA+CGG + chr5_3:30962756-30962775 None:intergenic 30.0%
CACAATTCATTTGTAGAAAG+AGG + chr5_3:30962895-30962914 None:intergenic 30.0%
!! TTGGTGATGATGATGATCAA+GGG + chr5_3:30961012-30961031 None:intergenic 35.0%
GACCAAAATTTGATGTTGAG+TGG - chr5_3:30961296-30961315 Msa0807730:intron 35.0%
! CACCACTCAACATCAAATTT+TGG + chr5_3:30961301-30961320 None:intergenic 35.0%
CAAAATTTGATGTTGAGTGG+TGG - chr5_3:30961299-30961318 Msa0807730:intron 35.0%
TCACTTGTCTTAACAGTTCT+TGG + chr5_3:30961488-30961507 None:intergenic 35.0%
TCCTCAAACACAAGTTGTTT+GGG - chr5_3:30961811-30961830 Msa0807730:CDS 35.0%
GGTGATCAAGCTTCTATAAT+TGG - chr5_3:30962086-30962105 Msa0807730:CDS 35.0%
GATCAAGCTTCTATAATTGG+GGG - chr5_3:30962089-30962108 Msa0807730:CDS 35.0%
! GTCTAGAATCACAAAAGAGA+AGG - chr5_3:30962153-30962172 Msa0807730:intron 35.0%
TTCATCTGGTCATTTGGTAA+AGG + chr5_3:30962263-30962282 None:intergenic 35.0%
TGCTGAAAGTAAGTCATGTT+TGG - chr5_3:30962319-30962338 Msa0807730:CDS 35.0%
GATGTAGAAGTGAAACTTCT+AGG - chr5_3:30962344-30962363 Msa0807730:CDS 35.0%
TTAAAATCCTCTCAAGGAGA+AGG - chr5_3:30962381-30962400 Msa0807730:CDS 35.0%
AAGAACTGTCTGTTCAATAG+TGG + chr5_3:30962477-30962496 None:intergenic 35.0%
!!! GTATTTTTTGTGATGTGTCC+AGG - chr5_3:30962688-30962707 Msa0807730:CDS 35.0%
!! CCAAATGACAAGAGTACTAT+AGG + chr5_3:30962856-30962875 None:intergenic 35.0%
CCTATAGTACTCTTGTCATT+TGG - chr5_3:30962853-30962872 Msa0807730:CDS 35.0%
!! TTGGTGATGATGATGATCAA+GGG + chr5_3:30961012-30961031 None:intergenic 35.0%
GACCAAAATTTGATGTTGAG+TGG - chr5_3:30961296-30961315 Msa0807730:intron 35.0%
! CACCACTCAACATCAAATTT+TGG + chr5_3:30961301-30961320 None:intergenic 35.0%
CAAAATTTGATGTTGAGTGG+TGG - chr5_3:30961299-30961318 Msa0807730:intron 35.0%
TCACTTGTCTTAACAGTTCT+TGG + chr5_3:30961488-30961507 None:intergenic 35.0%
TCCTCAAACACAAGTTGTTT+GGG - chr5_3:30961811-30961830 Msa0807730:CDS 35.0%
GGTGATCAAGCTTCTATAAT+TGG - chr5_3:30962086-30962105 Msa0807730:CDS 35.0%
GATCAAGCTTCTATAATTGG+GGG - chr5_3:30962089-30962108 Msa0807730:CDS 35.0%
! GTCTAGAATCACAAAAGAGA+AGG - chr5_3:30962153-30962172 Msa0807730:intron 35.0%
TTCATCTGGTCATTTGGTAA+AGG + chr5_3:30962263-30962282 None:intergenic 35.0%
TGCTGAAAGTAAGTCATGTT+TGG - chr5_3:30962319-30962338 Msa0807730:CDS 35.0%
GATGTAGAAGTGAAACTTCT+AGG - chr5_3:30962344-30962363 Msa0807730:CDS 35.0%
TTAAAATCCTCTCAAGGAGA+AGG - chr5_3:30962381-30962400 Msa0807730:CDS 35.0%
AAGAACTGTCTGTTCAATAG+TGG + chr5_3:30962477-30962496 None:intergenic 35.0%
!!! GTATTTTTTGTGATGTGTCC+AGG - chr5_3:30962688-30962707 Msa0807730:CDS 35.0%
!! CCAAATGACAAGAGTACTAT+AGG + chr5_3:30962856-30962875 None:intergenic 35.0%
CCTATAGTACTCTTGTCATT+TGG - chr5_3:30962853-30962872 Msa0807730:CDS 35.0%
GTGTTGAAGCTACAAGGTAT+GGG + chr5_3:30960978-30960997 None:intergenic 40.0%
TGTGTTGAAGCTACAAGGTA+TGG + chr5_3:30960979-30960998 None:intergenic 40.0%
TCAAGTGTGTTGAAGCTACA+AGG + chr5_3:30960984-30961003 None:intergenic 40.0%
!! GTTGGTGATGATGATGATCA+AGG + chr5_3:30961013-30961032 None:intergenic 40.0%
! GTTCGTATTGTTGTTGCTGT+TGG + chr5_3:30961031-30961050 None:intergenic 40.0%
!!! CAGCTTTTGAAGTATCGAGT+TGG - chr5_3:30961050-30961069 Msa0807730:three_prime_UTR 40.0%
ACATCGGGTGAAAACAACAA+CGG - chr5_3:30961077-30961096 Msa0807730:three_prime_UTR 40.0%
TGAAAACAACAACGGAATGG+TGG - chr5_3:30961085-30961104 Msa0807730:three_prime_UTR 40.0%
ATGCCTCAAACACAAACTTC+AGG - chr5_3:30961116-30961135 Msa0807730:exon 40.0%
! CAAACTTCAGGAGGCTTTTA+TGG - chr5_3:30961128-30961147 Msa0807730:CDS 40.0%
! GTGATGCAGTTTGCAGATTT+TGG - chr5_3:30961185-30961204 Msa0807730:CDS 40.0%
! TCGCGGTTTAAGGCTAATTT+AGG + chr5_3:30961212-30961231 None:intergenic 40.0%
AGTTTCTGACGAGAACAACT+CGG - chr5_3:30961409-30961428 Msa0807730:CDS 40.0%
TGCAAGAGAACAACAAGAAG+AGG - chr5_3:30961456-30961475 Msa0807730:CDS 40.0%
TGACTCACATAGCTGTTGAA+AGG - chr5_3:30961528-30961547 Msa0807730:CDS 40.0%
TAGCTGTTGAAAGGAATCGA+AGG - chr5_3:30961537-30961556 Msa0807730:CDS 40.0%
CTAACTCATCCTCACAAAAC+CGG - chr5_3:30961686-30961705 Msa0807730:CDS 40.0%
! AAACCGGCTTTGTATGAGTT+AGG - chr5_3:30961702-30961721 Msa0807730:CDS 40.0%
TTAGGCCCCAAATTTCAACA+TGG - chr5_3:30961720-30961739 Msa0807730:CDS 40.0%
GTCCTCAAACACAAGTTGTT+TGG - chr5_3:30961810-30961829 Msa0807730:CDS 40.0%
CCTCAAACACAAGTTGTTTG+GGG - chr5_3:30961812-30961831 Msa0807730:CDS 40.0%
CTCAAACACAAGTTGTTTGG+GGG - chr5_3:30961813-30961832 Msa0807730:CDS 40.0%
TCCTGTCTCCTTAGAAATCA+AGG - chr5_3:30961873-30961892 Msa0807730:intron 40.0%
! TCCTTGATTTCTAAGGAGAC+AGG + chr5_3:30961877-30961896 None:intergenic 40.0%
GGGAGCTATAGAATTTGTGA+GGG - chr5_3:30962109-30962128 Msa0807730:intron 40.0%
CAAAAGAGAAGGAGACTACT+AGG - chr5_3:30962164-30962183 Msa0807730:intron 40.0%
AAAGGAGCTGGAAAAAATGG+AGG + chr5_3:30962245-30962264 None:intergenic 40.0%
GGTAAAGGAGCTGGAAAAAA+TGG + chr5_3:30962248-30962267 None:intergenic 40.0%
! ACTAGCTTCATCTGGTCATT+TGG + chr5_3:30962269-30962288 None:intergenic 40.0%
AAGCTAGTTGAGATGGAAAC+TGG - chr5_3:30962281-30962300 Msa0807730:intron 40.0%
! TAGTGGTGATGTTTGTGTGA+AGG + chr5_3:30962460-30962479 None:intergenic 40.0%
AGGTATATTCAGGGTGTGTT+TGG - chr5_3:30962513-30962532 Msa0807730:CDS 40.0%
TTGGATTGAGGGTTTAAGAG+AGG - chr5_3:30962532-30962551 Msa0807730:CDS 40.0%
ATTGAGGGTTTAAGAGAGGA+AGG - chr5_3:30962536-30962555 Msa0807730:CDS 40.0%
AGCTAGTGATACAAGGTTCA+CGG - chr5_3:30962712-30962731 Msa0807730:CDS 40.0%
GTAGAAAGAGGCTTCTAGTA+TGG + chr5_3:30962883-30962902 None:intergenic 40.0%
GTGTTGAAGCTACAAGGTAT+GGG + chr5_3:30960978-30960997 None:intergenic 40.0%
TGTGTTGAAGCTACAAGGTA+TGG + chr5_3:30960979-30960998 None:intergenic 40.0%
TCAAGTGTGTTGAAGCTACA+AGG + chr5_3:30960984-30961003 None:intergenic 40.0%
!! GTTGGTGATGATGATGATCA+AGG + chr5_3:30961013-30961032 None:intergenic 40.0%
! GTTCGTATTGTTGTTGCTGT+TGG + chr5_3:30961031-30961050 None:intergenic 40.0%
!!! CAGCTTTTGAAGTATCGAGT+TGG - chr5_3:30961050-30961069 Msa0807730:three_prime_UTR 40.0%
ACATCGGGTGAAAACAACAA+CGG - chr5_3:30961077-30961096 Msa0807730:three_prime_UTR 40.0%
TGAAAACAACAACGGAATGG+TGG - chr5_3:30961085-30961104 Msa0807730:three_prime_UTR 40.0%
ATGCCTCAAACACAAACTTC+AGG - chr5_3:30961116-30961135 Msa0807730:exon 40.0%
! CAAACTTCAGGAGGCTTTTA+TGG - chr5_3:30961128-30961147 Msa0807730:CDS 40.0%
! GTGATGCAGTTTGCAGATTT+TGG - chr5_3:30961185-30961204 Msa0807730:CDS 40.0%
! TCGCGGTTTAAGGCTAATTT+AGG + chr5_3:30961212-30961231 None:intergenic 40.0%
AGTTTCTGACGAGAACAACT+CGG - chr5_3:30961409-30961428 Msa0807730:CDS 40.0%
TGCAAGAGAACAACAAGAAG+AGG - chr5_3:30961456-30961475 Msa0807730:CDS 40.0%
TGACTCACATAGCTGTTGAA+AGG - chr5_3:30961528-30961547 Msa0807730:CDS 40.0%
TAGCTGTTGAAAGGAATCGA+AGG - chr5_3:30961537-30961556 Msa0807730:CDS 40.0%
CTAACTCATCCTCACAAAAC+CGG - chr5_3:30961686-30961705 Msa0807730:CDS 40.0%
! AAACCGGCTTTGTATGAGTT+AGG - chr5_3:30961702-30961721 Msa0807730:CDS 40.0%
TTAGGCCCCAAATTTCAACA+TGG - chr5_3:30961720-30961739 Msa0807730:CDS 40.0%
GTCCTCAAACACAAGTTGTT+TGG - chr5_3:30961810-30961829 Msa0807730:CDS 40.0%
CCTCAAACACAAGTTGTTTG+GGG - chr5_3:30961812-30961831 Msa0807730:CDS 40.0%
CTCAAACACAAGTTGTTTGG+GGG - chr5_3:30961813-30961832 Msa0807730:CDS 40.0%
TCCTGTCTCCTTAGAAATCA+AGG - chr5_3:30961873-30961892 Msa0807730:intron 40.0%
! TCCTTGATTTCTAAGGAGAC+AGG + chr5_3:30961877-30961896 None:intergenic 40.0%
GGGAGCTATAGAATTTGTGA+GGG - chr5_3:30962109-30962128 Msa0807730:intron 40.0%
CAAAAGAGAAGGAGACTACT+AGG - chr5_3:30962164-30962183 Msa0807730:intron 40.0%
AAAGGAGCTGGAAAAAATGG+AGG + chr5_3:30962245-30962264 None:intergenic 40.0%
GGTAAAGGAGCTGGAAAAAA+TGG + chr5_3:30962248-30962267 None:intergenic 40.0%
! ACTAGCTTCATCTGGTCATT+TGG + chr5_3:30962269-30962288 None:intergenic 40.0%
AAGCTAGTTGAGATGGAAAC+TGG - chr5_3:30962281-30962300 Msa0807730:intron 40.0%
! TAGTGGTGATGTTTGTGTGA+AGG + chr5_3:30962460-30962479 None:intergenic 40.0%
AGGTATATTCAGGGTGTGTT+TGG - chr5_3:30962513-30962532 Msa0807730:CDS 40.0%
TTGGATTGAGGGTTTAAGAG+AGG - chr5_3:30962532-30962551 Msa0807730:CDS 40.0%
ATTGAGGGTTTAAGAGAGGA+AGG - chr5_3:30962536-30962555 Msa0807730:CDS 40.0%
AGCTAGTGATACAAGGTTCA+CGG - chr5_3:30962712-30962731 Msa0807730:CDS 40.0%
GTAGAAAGAGGCTTCTAGTA+TGG + chr5_3:30962883-30962902 None:intergenic 40.0%
TTGAAGCTACAAGGTATGGG+TGG + chr5_3:30960975-30960994 None:intergenic 45.0%
!! GTATCGAGTTGGCGAAACAT+CGG - chr5_3:30961061-30961080 Msa0807730:three_prime_UTR 45.0%
!! TATCGAGTTGGCGAAACATC+GGG - chr5_3:30961062-30961081 Msa0807730:three_prime_UTR 45.0%
GGGTGAAAACAACAACGGAA+TGG - chr5_3:30961082-30961101 Msa0807730:three_prime_UTR 45.0%
CCTCCTGAAGTTTGTGTTTG+AGG + chr5_3:30961122-30961141 None:intergenic 45.0%
CCTCAAACACAAACTTCAGG+AGG - chr5_3:30961119-30961138 Msa0807730:exon 45.0%
ACCTGATTCTTCGCGGTTTA+AGG + chr5_3:30961222-30961241 None:intergenic 45.0%
CTTCGATACCTGATTCTTCG+CGG + chr5_3:30961229-30961248 None:intergenic 45.0%
! TTGATGTTGAGTGGTGGTGA+TGG - chr5_3:30961305-30961324 Msa0807730:intron 45.0%
! TGATGTTGAGTGGTGGTGAT+GGG - chr5_3:30961306-30961325 Msa0807730:intron 45.0%
GGTTAGGAGAAAATGACGAG+AGG - chr5_3:30961327-30961346 Msa0807730:intron 45.0%
GAGGTTCAAATTGACAAGCG+TGG - chr5_3:30961346-30961365 Msa0807730:intron 45.0%
GTTCAAATTGACAAGCGTGG+AGG - chr5_3:30961349-30961368 Msa0807730:intron 45.0%
!! CATACAAAGCCGGTTTTGTG+AGG + chr5_3:30961698-30961717 None:intergenic 45.0%
TTCAACATGGTATCAGAGCG+TGG - chr5_3:30961733-30961752 Msa0807730:CDS 45.0%
TGGTATCAGAGCGTGGTTAA+CGG - chr5_3:30961740-30961759 Msa0807730:CDS 45.0%
CCCCAAACAACTTGTGTTTG+AGG + chr5_3:30961815-30961834 None:intergenic 45.0%
AAACACAAGTTGTTTGGGGG+TGG - chr5_3:30961816-30961835 Msa0807730:CDS 45.0%
GGGGAGCTATAGAATTTGTG+AGG - chr5_3:30962108-30962127 Msa0807730:intron 45.0%
TGGTCATTTGGTAAAGGAGC+TGG + chr5_3:30962257-30962276 None:intergenic 45.0%
! CCATCTCAACTAGCTTCATC+TGG + chr5_3:30962277-30962296 None:intergenic 45.0%
CCAGATGAAGCTAGTTGAGA+TGG - chr5_3:30962274-30962293 Msa0807730:intron 45.0%
! ATGGTCTTGATCAACTGTCC+AGG + chr5_3:30962407-30962426 None:intergenic 45.0%
CATGTCTTCAAGAGCAGCAA+TGG + chr5_3:30962426-30962445 None:intergenic 45.0%
TTCAGGGTGTGTTTGGATTG+AGG - chr5_3:30962520-30962539 Msa0807730:CDS 45.0%
TCAGGGTGTGTTTGGATTGA+GGG - chr5_3:30962521-30962540 Msa0807730:CDS 45.0%
AGGGTTTAAGAGAGGAAGGA+AGG - chr5_3:30962540-30962559 Msa0807730:CDS 45.0%
GGGTTTAAGAGAGGAAGGAA+GGG - chr5_3:30962541-30962560 Msa0807730:CDS 45.0%
GGTTTAAGAGAGGAAGGAAG+GGG - chr5_3:30962542-30962561 Msa0807730:CDS 45.0%
TCCAGGTAGCTAGTGATACA+AGG - chr5_3:30962705-30962724 Msa0807730:CDS 45.0%
ACCTTGTATCACTAGCTACC+TGG + chr5_3:30962709-30962728 None:intergenic 45.0%
TTGAAGCTACAAGGTATGGG+TGG + chr5_3:30960975-30960994 None:intergenic 45.0%
!! GTATCGAGTTGGCGAAACAT+CGG - chr5_3:30961061-30961080 Msa0807730:three_prime_UTR 45.0%
!! TATCGAGTTGGCGAAACATC+GGG - chr5_3:30961062-30961081 Msa0807730:three_prime_UTR 45.0%
GGGTGAAAACAACAACGGAA+TGG - chr5_3:30961082-30961101 Msa0807730:three_prime_UTR 45.0%
CCTCCTGAAGTTTGTGTTTG+AGG + chr5_3:30961122-30961141 None:intergenic 45.0%
CCTCAAACACAAACTTCAGG+AGG - chr5_3:30961119-30961138 Msa0807730:exon 45.0%
ACCTGATTCTTCGCGGTTTA+AGG + chr5_3:30961222-30961241 None:intergenic 45.0%
CTTCGATACCTGATTCTTCG+CGG + chr5_3:30961229-30961248 None:intergenic 45.0%
! TTGATGTTGAGTGGTGGTGA+TGG - chr5_3:30961305-30961324 Msa0807730:intron 45.0%
! TGATGTTGAGTGGTGGTGAT+GGG - chr5_3:30961306-30961325 Msa0807730:intron 45.0%
GGTTAGGAGAAAATGACGAG+AGG - chr5_3:30961327-30961346 Msa0807730:intron 45.0%
GAGGTTCAAATTGACAAGCG+TGG - chr5_3:30961346-30961365 Msa0807730:intron 45.0%
GTTCAAATTGACAAGCGTGG+AGG - chr5_3:30961349-30961368 Msa0807730:intron 45.0%
!! CATACAAAGCCGGTTTTGTG+AGG + chr5_3:30961698-30961717 None:intergenic 45.0%
TTCAACATGGTATCAGAGCG+TGG - chr5_3:30961733-30961752 Msa0807730:CDS 45.0%
TGGTATCAGAGCGTGGTTAA+CGG - chr5_3:30961740-30961759 Msa0807730:CDS 45.0%
CCCCAAACAACTTGTGTTTG+AGG + chr5_3:30961815-30961834 None:intergenic 45.0%
AAACACAAGTTGTTTGGGGG+TGG - chr5_3:30961816-30961835 Msa0807730:CDS 45.0%
GGGGAGCTATAGAATTTGTG+AGG - chr5_3:30962108-30962127 Msa0807730:intron 45.0%
TGGTCATTTGGTAAAGGAGC+TGG + chr5_3:30962257-30962276 None:intergenic 45.0%
! CCATCTCAACTAGCTTCATC+TGG + chr5_3:30962277-30962296 None:intergenic 45.0%
CCAGATGAAGCTAGTTGAGA+TGG - chr5_3:30962274-30962293 Msa0807730:intron 45.0%
! ATGGTCTTGATCAACTGTCC+AGG + chr5_3:30962407-30962426 None:intergenic 45.0%
CATGTCTTCAAGAGCAGCAA+TGG + chr5_3:30962426-30962445 None:intergenic 45.0%
TTCAGGGTGTGTTTGGATTG+AGG - chr5_3:30962520-30962539 Msa0807730:CDS 45.0%
TCAGGGTGTGTTTGGATTGA+GGG - chr5_3:30962521-30962540 Msa0807730:CDS 45.0%
AGGGTTTAAGAGAGGAAGGA+AGG - chr5_3:30962540-30962559 Msa0807730:CDS 45.0%
GGGTTTAAGAGAGGAAGGAA+GGG - chr5_3:30962541-30962560 Msa0807730:CDS 45.0%
GGTTTAAGAGAGGAAGGAAG+GGG - chr5_3:30962542-30962561 Msa0807730:CDS 45.0%
TCCAGGTAGCTAGTGATACA+AGG - chr5_3:30962705-30962724 Msa0807730:CDS 45.0%
ACCTTGTATCACTAGCTACC+TGG + chr5_3:30962709-30962728 None:intergenic 45.0%
GCCTTAAACCGCGAAGAATC+AGG - chr5_3:30961218-30961237 Msa0807730:intron 50.0%
!! TTGAGTGGTGGTGATGGGTT+AGG - chr5_3:30961311-30961330 Msa0807730:intron 50.0%
AACCAGGCATGAGGGATCTA+AGG + chr5_3:30961589-30961608 None:intergenic 50.0%
CACGTATGAACCAGGCATGA+GGG + chr5_3:30961597-30961616 None:intergenic 50.0%
TGCCTGGTTCATACGTGCAA+AGG - chr5_3:30961600-30961619 Msa0807730:CDS 50.0%
GCCTGGTTCATACGTGCAAA+GGG - chr5_3:30961601-30961620 Msa0807730:CDS 50.0%
ACCCTTTGCACGTATGAACC+AGG + chr5_3:30961605-30961624 None:intergenic 50.0%
GGGCCTAACTCATACAAAGC+CGG + chr5_3:30961708-30961727 None:intergenic 50.0%
AGGAGACAGGAACATACGTC+TGG + chr5_3:30961864-30961883 None:intergenic 50.0%
TTAAGAGAGGAAGGAAGGGG+AGG - chr5_3:30962545-30962564 Msa0807730:CDS 50.0%
TAAGAGAGGAAGGAAGGGGA+GGG - chr5_3:30962546-30962565 Msa0807730:CDS 50.0%
GCCTTAAACCGCGAAGAATC+AGG - chr5_3:30961218-30961237 Msa0807730:intron 50.0%
!! TTGAGTGGTGGTGATGGGTT+AGG - chr5_3:30961311-30961330 Msa0807730:intron 50.0%
AACCAGGCATGAGGGATCTA+AGG + chr5_3:30961589-30961608 None:intergenic 50.0%
CACGTATGAACCAGGCATGA+GGG + chr5_3:30961597-30961616 None:intergenic 50.0%
TGCCTGGTTCATACGTGCAA+AGG - chr5_3:30961600-30961619 Msa0807730:CDS 50.0%
GCCTGGTTCATACGTGCAAA+GGG - chr5_3:30961601-30961620 Msa0807730:CDS 50.0%
ACCCTTTGCACGTATGAACC+AGG + chr5_3:30961605-30961624 None:intergenic 50.0%
GGGCCTAACTCATACAAAGC+CGG + chr5_3:30961708-30961727 None:intergenic 50.0%
AGGAGACAGGAACATACGTC+TGG + chr5_3:30961864-30961883 None:intergenic 50.0%
TTAAGAGAGGAAGGAAGGGG+AGG - chr5_3:30962545-30962564 Msa0807730:CDS 50.0%
TAAGAGAGGAAGGAAGGGGA+GGG - chr5_3:30962546-30962565 Msa0807730:CDS 50.0%
GTCCTTAGATCCCTCATGCC+TGG - chr5_3:30961584-30961603 Msa0807730:CDS 55.0%
GCACGTATGAACCAGGCATG+AGG + chr5_3:30961598-30961617 None:intergenic 55.0%
ATCCTCTCAAGGAGAAGGCC+TGG - chr5_3:30962386-30962405 Msa0807730:CDS 55.0%
GTCCTTAGATCCCTCATGCC+TGG - chr5_3:30961584-30961603 Msa0807730:CDS 55.0%
GCACGTATGAACCAGGCATG+AGG + chr5_3:30961598-30961617 None:intergenic 55.0%
ATCCTCTCAAGGAGAAGGCC+TGG - chr5_3:30962386-30962405 Msa0807730:CDS 55.0%
GTTGTTTGGGGGTGGTCGCA+CGG - chr5_3:30961824-30961843 Msa0807730:intron 60.0%
GTCCAGGCCTTCTCCTTGAG+AGG + chr5_3:30962391-30962410 None:intergenic 60.0%
GTTGTTTGGGGGTGGTCGCA+CGG - chr5_3:30961824-30961843 Msa0807730:intron 60.0%
GTCCAGGCCTTCTCCTTGAG+AGG + chr5_3:30962391-30962410 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 30960936 30962986 30960936 ID=Msa0807730;Name=Msa0807730
chr5_3 mRNA 30960936 30962986 30960936 ID=Msa0807730-mRNA-1;Parent=Msa0807730;Name=Msa0807730-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.33|0.5|0.75|1|1|4|187|422
chr5_3 exon 30960936 30961212 30960936 ID=Msa0807730-mRNA-1:exon:10292;Parent=Msa0807730-mRNA-1
chr5_3 exon 30961408 30961836 30961408 ID=Msa0807730-mRNA-1:exon:10291;Parent=Msa0807730-mRNA-1
chr5_3 exon 30962056 30962118 30962056 ID=Msa0807730-mRNA-1:exon:10290;Parent=Msa0807730-mRNA-1
chr5_3 exon 30962300 30962986 30962300 ID=Msa0807730-mRNA-1:exon:10289;Parent=Msa0807730-mRNA-1
chr5_3 CDS 30962300 30962986 30962300 ID=Msa0807730-mRNA-1:cds;Parent=Msa0807730-mRNA-1
chr5_3 CDS 30962056 30962118 30962056 ID=Msa0807730-mRNA-1:cds;Parent=Msa0807730-mRNA-1
chr5_3 CDS 30961408 30961836 30961408 ID=Msa0807730-mRNA-1:cds;Parent=Msa0807730-mRNA-1
chr5_3 CDS 30961123 30961212 30961123 ID=Msa0807730-mRNA-1:cds;Parent=Msa0807730-mRNA-1
chr5_3 three_prime_UTR 30960936 30961122 30960936 ID=Msa0807730-mRNA-1:three_prime_utr;Parent=Msa0807730-mRNA-1
Gene Sequence

>Msa0807730

ATGTTGTTCTGCTCAAATTTTGAATCTTTGCAGGCACCACCCATACCTTGTAGCTTCAACACACTTGACTACTCCCTTGATCATCATCATCACCAACAGCAACAACAATACGAACAGCTTTTGAAGTATCGAGTTGGCGAAACATCGGGTGAAAACAACAACGGAATGGTGGATAATTACATGCCTCAAACACAAACTTCAGGAGGCTTTTATGGTGCAAACTCTTTTGATAAAATGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCTAAATTAGCCTTAAACCGCGAAGAATCAGGTATCGAAGACCCGATTTATTTTCTCAAGTTTCCTGTCTTAACCAATAAGATAGAAGACCAAAATTTGATGTTGAGTGGTGGTGATGGGTTAGGAGAAAATGACGAGAGGTTCAAATTGACAAGCGTGGAGGATAAATCAAGAGATCAACAAGATCACGAAGAAGCTCGAGTTTCTGACGAGAACAACTCGGTGCAAGAGAAGAATTGTGCAGTAGTGCAAGAGAACAACAAGAAGAGGAAGAGACCAAGAACTGTTAAGACAAGTGAAGAAGTAGAGAGTCAACGTATGACTCACATAGCTGTTGAAAGGAATCGAAGGAAACAAATGAATGAGCATCTTCGTGTCCTTAGATCCCTCATGCCTGGTTCATACGTGCAAAGGATGATCGTCCTCAAACACAAGTTGTTTGGGGGTGGTCGCACGGTCTTCGTTCATCATCCAGACGGTGATCAAGCTTCTATAATTGGGGGAGCTATAGAATTTGTGAGGGAATTGGAACAACTTCTTCAATGTCTAGAATCACAAAAGAGAAGGAGACTACTAGGAGAAGCACAATCAAAACAAATTGGGGATTCATCTCTTGCATCAACACAACAACAGCCTCCATTTTTTCCAGCTCCTTTACCAAATGACCAGATGAAGCTAGTTGAGATGGAAACTGGACTTCAAGAAGAAACTGCTGAAAGTAAGTCATGTTTGGCTGATGTAGAAGTGAAACTTCTAGGATTTGATGCAATGATTAAAATCCTCTCAAGGAGAAGGCCTGGACAGTTGATCAAGACCATTGCTGCTCTTGAAGACATGCAGCTCATTATCCTTCACACAAACATCACCACTATTGAACAGACAGTTCTTTATTCTTTCAATGTCAAGGTAGCTAGTGATACAAGGTTCACGGCTGAAGATATAGCAAGCTCCGTTCAGCAGATACTAAGTTTTATTCATGCAAACACTAGCATGTGA

Protein sequence

>Msa0807730

MLFCSNFESLQAPPIPCSFNTLDYSLDHHHHQQQQQYEQLLKYRVGETSGENNNGMVDNYMPQTQTSGGFYGANSFDKMSFADVMQFADFGPKLALNREESGIEDPIYFLKFPVLTNKIEDQNLMLSGGDGLGENDERFKLTSVEDKSRDQQDHEEARVSDENNSVQEKNCAVVQENNKKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRMIVLKHKLFGGGRTVFVHHPDGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQSKQIGDSSLASTQQQPPFFPAPLPNDQMKLVEMETGLQEETAESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDMQLIILHTNITTIEQTVLYSFNVKVASDTRFTAEDIASSVQQILSFIHANTSM*