AlfalfaGEDB | MS.gene41873

M. sativa cultivar XinJiangDaYe / MS.gene41873

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41873.t1	XP_003624845.1	97.3	74	2	0	13	86	179	252	4.30E-33	150.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41873.t1	Q2HUI2	97.3	74	2	0	13	86	179	252	3.1e-33	150.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene41873	0.815868	7.42E-52	-1.69E-46
MS.gene049222	MS.gene41873	0.830851	2.33E-55	-1.69E-46
MS.gene049356	MS.gene41873	0.867133	1.71E-65	-1.69E-46
MS.gene049369	MS.gene41873	0.858742	6.69E-63	-1.69E-46
MS.gene049396	MS.gene41873	0.879575	1.11E-69	-1.69E-46
MS.gene049427	MS.gene41873	0.805767	1.14E-49	-1.69E-46
MS.gene049488	MS.gene41873	0.827201	1.78E-54	-1.69E-46
MS.gene049609	MS.gene41873	0.88924	2.89E-73	-1.69E-46
MS.gene049633	MS.gene41873	0.832158	1.11E-55	-1.69E-46
MS.gene049805	MS.gene41873	0.862058	6.63E-64	-1.69E-46
MS.gene050400	MS.gene41873	0.830595	2.69E-55	-1.69E-46
MS.gene050499	MS.gene41873	0.81536	9.62E-52	-1.69E-46
MS.gene050520	MS.gene41873	0.808903	2.46E-50	-1.69E-46
MS.gene050553	MS.gene41873	0.800991	1.11E-48	-1.69E-46
MS.gene050593	MS.gene41873	0.89627	4.34E-76	-1.69E-46
MS.gene050625	MS.gene41873	0.803888	2.81E-49	-1.69E-46
MS.gene050670	MS.gene41873	0.893059	8.94E-75	-1.69E-46
MS.gene050686	MS.gene41873	0.801326	9.49E-49	-1.69E-46
MS.gene050747	MS.gene41873	0.864138	1.51E-64	-1.69E-46
MS.gene050772	MS.gene41873	0.865214	6.95E-65	-1.69E-46
MS.gene05080	MS.gene41873	0.847859	8.85E-60	-1.69E-46
MS.gene05081	MS.gene41873	0.828254	9.96E-55	-1.69E-46
MS.gene050871	MS.gene41873	0.80068	1.29E-48	-1.69E-46
MS.gene050950	MS.gene41873	0.858786	6.48E-63	-1.69E-46
MS.gene050971	MS.gene41873	0.820197	7.79E-53	-1.69E-46
MS.gene05105	MS.gene41873	0.89385	4.28E-75	-1.69E-46
MS.gene051360	MS.gene41873	0.860046	2.71E-63	-1.69E-46
MS.gene051387	MS.gene41873	0.881102	3.17E-70	-1.69E-46
MS.gene051521	MS.gene41873	0.818858	1.57E-52	-1.69E-46
MS.gene051525	MS.gene41873	0.873947	9.91E-68	-1.69E-46
MS.gene051605	MS.gene41873	0.804026	2.63E-49	-1.69E-46
MS.gene051666	MS.gene41873	0.829381	5.31E-55	-1.69E-46
MS.gene051692	MS.gene41873	0.817143	3.84E-52	-1.69E-46
MS.gene051734	MS.gene41873	0.814628	1.40E-51	-1.69E-46
MS.gene051838	MS.gene41873	0.868393	6.75E-66	-1.69E-46
MS.gene051858	MS.gene41873	0.815225	1.03E-51	-1.69E-46
MS.gene051874	MS.gene41873	0.819564	1.09E-52	-1.69E-46
MS.gene051941	MS.gene41873	0.814093	1.84E-51	-1.69E-46
MS.gene052011	MS.gene41873	-0.809661	1.69E-50	-1.69E-46
MS.gene052134	MS.gene41873	0.81881	1.61E-52	-1.69E-46
MS.gene052135	MS.gene41873	0.817258	3.62E-52	-1.69E-46
MS.gene052136	MS.gene41873	0.838753	2.38E-57	-1.69E-46
MS.gene052188	MS.gene41873	0.842197	2.99E-58	-1.69E-46
MS.gene052253	MS.gene41873	0.824097	9.71E-54	-1.69E-46
MS.gene052310	MS.gene41873	0.826928	2.07E-54	-1.69E-46
MS.gene052340	MS.gene41873	0.80844	3.09E-50	-1.69E-46
MS.gene052346	MS.gene41873	0.864624	1.06E-64	-1.69E-46
MS.gene052414	MS.gene41873	0.878884	1.96E-69	-1.69E-46
MS.gene052421	MS.gene41873	0.87335	1.57E-67	-1.69E-46
MS.gene052481	MS.gene41873	0.827612	1.42E-54	-1.69E-46
MS.gene052484	MS.gene41873	0.82724	1.74E-54	-1.69E-46
MS.gene052485	MS.gene41873	0.813435	2.56E-51	-1.69E-46
MS.gene052501	MS.gene41873	0.85555	5.85E-62	-1.69E-46
MS.gene052503	MS.gene41873	0.831393	1.71E-55	-1.69E-46
MS.gene052505	MS.gene41873	0.86062	1.82E-63	-1.69E-46
MS.gene052615	MS.gene41873	0.855036	8.26E-62	-1.69E-46
MS.gene052823	MS.gene41873	0.822778	1.97E-53	-1.69E-46
MS.gene052825	MS.gene41873	0.820484	6.70E-53	-1.69E-46
MS.gene052870	MS.gene41873	0.803355	3.63E-49	-1.69E-46
MS.gene052872	MS.gene41873	0.802094	6.60E-49	-1.69E-46
MS.gene052966	MS.gene41873	0.826893	2.11E-54	-1.69E-46
MS.gene052982	MS.gene41873	0.860061	2.69E-63	-1.69E-46
MS.gene052999	MS.gene41873	0.844457	7.47E-59	-1.69E-46
MS.gene053103	MS.gene41873	0.823942	1.06E-53	-1.69E-46
MS.gene053104	MS.gene41873	0.836373	9.72E-57	-1.69E-46
MS.gene053169	MS.gene41873	0.839406	1.61E-57	-1.69E-46
MS.gene053203	MS.gene41873	0.812341	4.45E-51	-1.69E-46
MS.gene053207	MS.gene41873	0.860455	2.04E-63	-1.69E-46
MS.gene053209	MS.gene41873	0.82499	5.98E-54	-1.69E-46
MS.gene053213	MS.gene41873	0.827477	1.53E-54	-1.69E-46
MS.gene053286	MS.gene41873	0.817782	2.76E-52	-1.69E-46
MS.gene053436	MS.gene41873	0.812981	3.22E-51	-1.69E-46
MS.gene053449	MS.gene41873	0.881845	1.71E-70	-1.69E-46
MS.gene053479	MS.gene41873	0.806777	6.98E-50	-1.69E-46
MS.gene053574	MS.gene41873	0.875419	3.13E-68	-1.69E-46
MS.gene053626	MS.gene41873	0.829134	6.10E-55	-1.69E-46
MS.gene053632	MS.gene41873	0.800425	1.45E-48	-1.69E-46
MS.gene053758	MS.gene41873	0.857902	1.19E-62	-1.69E-46
MS.gene053813	MS.gene41873	0.813192	2.90E-51	-1.69E-46
MS.gene053824	MS.gene41873	0.849837	2.50E-60	-1.69E-46
MS.gene053912	MS.gene41873	0.885911	5.40E-72	-1.69E-46
MS.gene053916	MS.gene41873	0.808912	2.45E-50	-1.69E-46
MS.gene054003	MS.gene41873	0.807441	5.05E-50	-1.69E-46
MS.gene054408	MS.gene41873	0.800566	1.36E-48	-1.69E-46
MS.gene054556	MS.gene41873	0.814944	1.19E-51	-1.69E-46
MS.gene054595	MS.gene41873	0.801034	1.09E-48	-1.69E-46
MS.gene054600	MS.gene41873	0.811919	5.50E-51	-1.69E-46
MS.gene054927	MS.gene41873	0.862376	5.29E-64	-1.69E-46
MS.gene05494	MS.gene41873	0.830878	2.29E-55	-1.69E-46
MS.gene05505	MS.gene41873	0.869085	4.03E-66	-1.69E-46
MS.gene055116	MS.gene41873	0.8576	1.46E-62	-1.69E-46
MS.gene055206	MS.gene41873	0.823698	1.20E-53	-1.69E-46
MS.gene055224	MS.gene41873	0.835645	1.49E-56	-1.69E-46
MS.gene055289	MS.gene41873	0.829944	3.88E-55	-1.69E-46
MS.gene055369	MS.gene41873	0.83201	1.21E-55	-1.69E-46
MS.gene055486	MS.gene41873	0.821931	3.11E-53	-1.69E-46
MS.gene055502	MS.gene41873	0.814454	1.53E-51	-1.69E-46
MS.gene055539	MS.gene41873	0.83312	6.40E-56	-1.69E-46
MS.gene05553	MS.gene41873	0.818723	1.69E-52	-1.69E-46
MS.gene055577	MS.gene41873	0.820875	5.44E-53	-1.69E-46
MS.gene055647	MS.gene41873	0.812605	3.90E-51	-1.69E-46
MS.gene055722	MS.gene41873	0.860064	2.68E-63	-1.69E-46
MS.gene055741	MS.gene41873	0.875231	3.63E-68	-1.69E-46
MS.gene055744	MS.gene41873	0.875367	3.26E-68	-1.69E-46
MS.gene055909	MS.gene41873	0.870557	1.33E-66	-1.69E-46
MS.gene055911	MS.gene41873	0.86841	6.67E-66	-1.69E-46
MS.gene05592	MS.gene41873	0.830149	3.45E-55	-1.69E-46
MS.gene055941	MS.gene41873	0.843351	1.48E-58	-1.69E-46
MS.gene05601	MS.gene41873	0.802058	6.72E-49	-1.69E-46
MS.gene056040	MS.gene41873	0.807807	4.22E-50	-1.69E-46
MS.gene056166	MS.gene41873	0.865554	5.43E-65	-1.69E-46
MS.gene056191	MS.gene41873	0.802468	5.53E-49	-1.69E-46
MS.gene056407	MS.gene41873	0.825378	4.84E-54	-1.69E-46
MS.gene056410	MS.gene41873	0.818232	2.18E-52	-1.69E-46
MS.gene056422	MS.gene41873	0.852797	3.65E-61	-1.69E-46
MS.gene056448	MS.gene41873	0.832448	9.40E-56	-1.69E-46
MS.gene056511	MS.gene41873	0.914866	1.16E-84	-1.69E-46
MS.gene056514	MS.gene41873	0.829318	5.50E-55	-1.69E-46
MS.gene05664	MS.gene41873	0.823194	1.58E-53	-1.69E-46
MS.gene05666	MS.gene41873	0.835734	1.41E-56	-1.69E-46
MS.gene056877	MS.gene41873	0.853949	1.70E-61	-1.69E-46
MS.gene056897	MS.gene41873	0.805164	1.52E-49	-1.69E-46
MS.gene057019	MS.gene41873	0.825171	5.42E-54	-1.69E-46
MS.gene057076	MS.gene41873	0.894575	2.17E-75	-1.69E-46
MS.gene057086	MS.gene41873	0.82631	2.91E-54	-1.69E-46
MS.gene057124	MS.gene41873	0.860866	1.53E-63	-1.69E-46
MS.gene057146	MS.gene41873	0.839209	1.82E-57	-1.69E-46
MS.gene057289	MS.gene41873	0.816691	4.85E-52	-1.69E-46
MS.gene057331	MS.gene41873	0.843072	1.75E-58	-1.69E-46
MS.gene057416	MS.gene41873	0.851373	9.26E-61	-1.69E-46
MS.gene057658	MS.gene41873	0.802003	6.89E-49	-1.69E-46
MS.gene057734	MS.gene41873	0.892997	9.47E-75	-1.69E-46
MS.gene057749	MS.gene41873	0.861112	1.29E-63	-1.69E-46
MS.gene057823	MS.gene41873	0.861286	1.14E-63	-1.69E-46
MS.gene057825	MS.gene41873	0.801243	9.87E-49	-1.69E-46
MS.gene057856	MS.gene41873	0.855368	6.61E-62	-1.69E-46
MS.gene057857	MS.gene41873	0.80103	1.09E-48	-1.69E-46
MS.gene057876	MS.gene41873	0.800263	1.56E-48	-1.69E-46
MS.gene058007	MS.gene41873	0.870451	1.44E-66	-1.69E-46
MS.gene058019	MS.gene41873	0.856824	2.48E-62	-1.69E-46
MS.gene058075	MS.gene41873	0.800852	1.19E-48	-1.69E-46
MS.gene058120	MS.gene41873	0.8595	3.96E-63	-1.69E-46
MS.gene058130	MS.gene41873	0.837721	4.40E-57	-1.69E-46
MS.gene058338	MS.gene41873	0.826336	2.87E-54	-1.69E-46
MS.gene058376	MS.gene41873	0.846444	2.16E-59	-1.69E-46
MS.gene05837	MS.gene41873	0.841818	3.77E-58	-1.69E-46
MS.gene058419	MS.gene41873	0.810436	1.15E-50	-1.69E-46
MS.gene058444	MS.gene41873	0.877201	7.60E-69	-1.69E-46
MS.gene058544	MS.gene41873	0.800063	1.72E-48	-1.69E-46
MS.gene058700	MS.gene41873	0.903993	1.95E-79	-1.69E-46
MS.gene058838	MS.gene41873	0.818908	1.53E-52	-1.69E-46
MS.gene05883	MS.gene41873	0.821525	3.86E-53	-1.69E-46
MS.gene05886	MS.gene41873	0.807723	4.40E-50	-1.69E-46
MS.gene058928	MS.gene41873	0.843488	1.36E-58	-1.69E-46
MS.gene058948	MS.gene41873	0.852294	5.07E-61	-1.69E-46
MS.gene058995	MS.gene41873	0.805269	1.45E-49	-1.69E-46
MS.gene059023	MS.gene41873	0.819912	9.05E-53	-1.69E-46
MS.gene05907	MS.gene41873	0.813119	3.01E-51	-1.69E-46
MS.gene05913	MS.gene41873	0.809975	1.45E-50	-1.69E-46
MS.gene059305	MS.gene41873	0.817563	3.09E-52	-1.69E-46
MS.gene05934	MS.gene41873	0.837638	4.62E-57	-1.69E-46
MS.gene059366	MS.gene41873	0.849728	2.68E-60	-1.69E-46
MS.gene059367	MS.gene41873	0.816528	5.28E-52	-1.69E-46
MS.gene059368	MS.gene41873	0.833156	6.27E-56	-1.69E-46
MS.gene059420	MS.gene41873	0.838773	2.36E-57	-1.69E-46
MS.gene059455	MS.gene41873	0.871669	5.73E-67	-1.69E-46
MS.gene059536	MS.gene41873	0.835894	1.29E-56	-1.69E-46
MS.gene059667	MS.gene41873	0.815869	7.41E-52	-1.69E-46
MS.gene059674	MS.gene41873	0.862293	5.61E-64	-1.69E-46
MS.gene059676	MS.gene41873	0.843209	1.61E-58	-1.69E-46
MS.gene059688	MS.gene41873	0.874659	5.68E-68	-1.69E-46
MS.gene059692	MS.gene41873	0.851721	7.38E-61	-1.69E-46
MS.gene059695	MS.gene41873	0.852438	4.62E-61	-1.69E-46
MS.gene059711	MS.gene41873	0.860117	2.58E-63	-1.69E-46
MS.gene059718	MS.gene41873	0.832251	1.05E-55	-1.69E-46
MS.gene059807	MS.gene41873	0.853331	2.56E-61	-1.69E-46
MS.gene059902	MS.gene41873	0.811262	7.65E-51	-1.69E-46
MS.gene059933	MS.gene41873	0.808294	3.32E-50	-1.69E-46
MS.gene060372	MS.gene41873	0.854472	1.20E-61	-1.69E-46
MS.gene060403	MS.gene41873	0.852774	3.70E-61	-1.69E-46
MS.gene060482	MS.gene41873	0.808791	2.60E-50	-1.69E-46
MS.gene060485	MS.gene41873	0.81735	3.45E-52	-1.69E-46
MS.gene060804	MS.gene41873	0.850581	1.55E-60	-1.69E-46
MS.gene060818	MS.gene41873	0.825639	4.20E-54	-1.69E-46
MS.gene060835	MS.gene41873	0.904423	1.25E-79	-1.69E-46
MS.gene060837	MS.gene41873	0.911134	8.58E-83	-1.69E-46
MS.gene06092	MS.gene41873	0.831474	1.64E-55	-1.69E-46
MS.gene06097	MS.gene41873	0.833308	5.75E-56	-1.69E-46
MS.gene061041	MS.gene41873	0.835398	1.72E-56	-1.69E-46
MS.gene061051	MS.gene41873	-0.810983	8.79E-51	-1.69E-46
MS.gene061154	MS.gene41873	0.87691	9.58E-69	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41873.t1	MTR_7g088210	97.297	74	2	0	13	86	179	252	2.55e-48	153

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene41873.t1	AT2G41120	46.835	79	34	2	13	85	181	257	8.28e-16	69.7

Find 23 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAAGATCCTACCAACTTA+TGG	0.295152	7.4:-20158205	MS.gene41873:CDS
ATTTCATCACCTATTCAATC+AGG	0.383372	7.4:-20158753	MS.gene41873:intron
TATTGAAAACCTGATTGAAT+AGG	0.413740	7.4:+20158744	None:intergenic
GAAAGATCCTACCAACTTAT+GGG	0.416370	7.4:-20158204	MS.gene41873:CDS
CTCCAAGGGCAAAGCTTCCC+AGG	0.433451	7.4:-20158080	MS.gene41873:CDS
TACATTGTGTTCTGCCCTCA+AGG	0.434776	7.4:-20158123	MS.gene41873:CDS
CTTTGCCCTTGGAGCTTCAG+TGG	0.439060	7.4:+20158089	None:intergenic
CGCGTATATGATCTAGAACT+TGG	0.442298	7.4:-20158162	MS.gene41873:CDS
AGCCTGGGAAGCTTTGCCCT+TGG	0.483988	7.4:+20158078	None:intergenic
TGGCATCATTAGACCCTTGA+GGG	0.509241	7.4:+20158109	None:intergenic
TTCTGAGGTAGCATTAAGCC+TGG	0.518926	7.4:+20158062	None:intergenic
CAGCATATTCTCCCATAAGT+TGG	0.529568	7.4:+20158193	None:intergenic
GGAATACTGCAATGTGCAGT+TGG	0.536785	7.4:-20158776	None:intergenic
CTTATGGGAGAATATGCTGC+AGG	0.540524	7.4:-20158189	MS.gene41873:CDS
TGATGATGTTTGTGTTGCAA+TGG	0.550109	7.4:-20158235	MS.gene41873:CDS
TGATGCCACTGAAGCTCCAA+GGG	0.576853	7.4:-20158094	MS.gene41873:CDS
ACATTGTGTTCTGCCCTCAA+GGG	0.584678	7.4:-20158122	MS.gene41873:CDS
ATGATGCCACTGAAGCTCCA+AGG	0.592193	7.4:-20158095	MS.gene41873:CDS
ATATTCTCCCATAAGTTGGT+AGG	0.594558	7.4:+20158197	None:intergenic
GTGGCATCATTAGACCCTTG+AGG	0.624422	7.4:+20158108	None:intergenic
ATATGCTACAAGATGTTCTG+AGG	0.636965	7.4:+20158047	None:intergenic
TCTGAGGTAGCATTAAGCCT+GGG	0.648996	7.4:+20158063	None:intergenic
TTATGGGAGAATATGCTGCA+GGG	0.653319	7.4:-20158188	MS.gene41873:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTTTTCATTTTATTTTTAG+TGG	-	chr7.4:20158098-20158117	MS.gene41873:CDS	15.0%
!!	ATATGATACATAACATTTCA+AGG	+	chr7.4:20158357-20158376	None:intergenic	20.0%
!!	ATTCACAAATGTTATATGAT+CGG	-	chr7.4:20158499-20158518	MS.gene41873:intron	20.0%
!!	GAATTAAATCTAATCTTGAA+TGG	+	chr7.4:20158483-20158502	None:intergenic	20.0%
!!!	TCATTTTATTTTTAGTGGTA+TGG	-	chr7.4:20158103-20158122	MS.gene41873:CDS	20.0%
!	TATTGAAAACCTGATTGAAT+AGG	+	chr7.4:20158059-20158078	None:intergenic	25.0%
!	TCTTTCTCAAACTTAAGAAA+CGG	+	chr7.4:20158267-20158286	None:intergenic	25.0%
!	TGCTGAATATAGAATCATAA+AGG	-	chr7.4:20158180-20158199	MS.gene41873:CDS	25.0%
!!!	AAATGTTATATGATCGGTTT+TGG	-	chr7.4:20158505-20158524	MS.gene41873:intron	25.0%
!!!	TACTGAGTTCAATTTTGATT+CGG	+	chr7.4:20158404-20158423	None:intergenic	25.0%
!!!	TTTTTAACTTGAATTTGAGC+AGG	-	chr7.4:20158539-20158558	MS.gene41873:intron	25.0%
	ATCTAATCTTGAATGGTAAC+AGG	+	chr7.4:20158476-20158495	None:intergenic	30.0%
	ATTTCATCACCTATTCAATC+AGG	-	chr7.4:20158047-20158066	MS.gene41873:CDS	30.0%
	GATACATAACATTTCAAGGT+TGG	+	chr7.4:20158353-20158372	None:intergenic	30.0%
	GCTATGTAAATTGAGAAAGA+TGG	-	chr7.4:20158227-20158246	MS.gene41873:CDS	30.0%
!	GAAAGATATTTCAGCAGTTT+TGG	-	chr7.4:20158281-20158300	MS.gene41873:intron	30.0%
!!!	TTTAGTGGTATGGTTTTGTT+TGG	-	chr7.4:20158113-20158132	MS.gene41873:CDS	30.0%
	AACTTAAGAAACGGTCCATT+AGG	+	chr7.4:20158258-20158277	None:intergenic	35.0%
	ACTTAAGAAACGGTCCATTA+GGG	+	chr7.4:20158257-20158276	None:intergenic	35.0%
	AGAAAGATCCTACCAACTTA+TGG	-	chr7.4:20158595-20158614	MS.gene41873:intron	35.0%
	ATATGCTACAAGATGTTCTG+AGG	+	chr7.4:20158756-20158775	None:intergenic	35.0%
	GAAAGATCCTACCAACTTAT+GGG	-	chr7.4:20158596-20158615	MS.gene41873:intron	35.0%
	GAATCATAAAGGAGCTATGA+TGG	-	chr7.4:20158191-20158210	MS.gene41873:CDS	35.0%
!	TGATGATGTTTGTGTTGCAA+TGG	-	chr7.4:20158565-20158584	MS.gene41873:intron	35.0%
!!	ATATTCTCCCATAAGTTGGT+AGG	+	chr7.4:20158606-20158625	None:intergenic	35.0%
	AGAAAGATGGAGTTCCCTAA+TGG	-	chr7.4:20158240-20158259	MS.gene41873:CDS	40.0%
	CAGCATATTCTCCCATAAGT+TGG	+	chr7.4:20158610-20158629	None:intergenic	40.0%
	TTATGGGAGAATATGCTGCA+GGG	-	chr7.4:20158612-20158631	MS.gene41873:intron	40.0%
!	AAAGGAGCTATGATGGAGTT+AGG	-	chr7.4:20158198-20158217	MS.gene41873:CDS	40.0%
!	AAGGAGCTATGATGGAGTTA+GGG	-	chr7.4:20158199-20158218	MS.gene41873:CDS	40.0%
!	CGCGTATATGATCTAGAACT+TGG	-	chr7.4:20158638-20158657	MS.gene41873:intron	40.0%
	ACATTGTGTTCTGCCCTCAA+GGG	-	chr7.4:20158678-20158697	MS.gene41873:intron	45.0%
	CAGCTAACTCTATCTGTGTC+TGG	+	chr7.4:20158317-20158336	None:intergenic	45.0%
	CTTATGGGAGAATATGCTGC+AGG	-	chr7.4:20158611-20158630	MS.gene41873:intron	45.0%
	TACATTGTGTTCTGCCCTCA+AGG	-	chr7.4:20158677-20158696	MS.gene41873:intron	45.0%
	TGGCATCATTAGACCCTTGA+GGG	+	chr7.4:20158694-20158713	None:intergenic	45.0%
!	AGGAGCTATGATGGAGTTAG+GGG	-	chr7.4:20158200-20158219	MS.gene41873:CDS	45.0%
!	TCTGAGGTAGCATTAAGCCT+GGG	+	chr7.4:20158740-20158759	None:intergenic	45.0%
!!	TTCTGAGGTAGCATTAAGCC+TGG	+	chr7.4:20158741-20158760	None:intergenic	45.0%
	ATGATGCCACTGAAGCTCCA+AGG	-	chr7.4:20158705-20158724	MS.gene41873:intron	50.0%
	GTGGCATCATTAGACCCTTG+AGG	+	chr7.4:20158695-20158714	None:intergenic	50.0%
	TGATGCCACTGAAGCTCCAA+GGG	-	chr7.4:20158706-20158725	MS.gene41873:intron	50.0%
!	AGCTATGATGGAGTTAGGGG+AGG	-	chr7.4:20158203-20158222	MS.gene41873:CDS	50.0%
!	CTATGATGGAGTTAGGGGAG+GGG	-	chr7.4:20158205-20158224	MS.gene41873:CDS	50.0%
!	GCTATGATGGAGTTAGGGGA+GGG	-	chr7.4:20158204-20158223	MS.gene41873:CDS	50.0%
	CTTTGCCCTTGGAGCTTCAG+TGG	+	chr7.4:20158714-20158733	None:intergenic	55.0%
	AGCCTGGGAAGCTTTGCCCT+TGG	+	chr7.4:20158725-20158744	None:intergenic	60.0%
	CTCCAAGGGCAAAGCTTCCC+AGG	-	chr7.4:20158720-20158739	MS.gene41873:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	20158035	20158787	20158035	ID=MS.gene41873
chr7.4	mRNA	20158035	20158787	20158035	ID=MS.gene41873.t1;Parent=MS.gene41873
chr7.4	exon	20158754	20158787	20158754	ID=MS.gene41873.t1.exon1;Parent=MS.gene41873.t1
chr7.4	CDS	20158754	20158787	20158754	ID=cds.MS.gene41873.t1;Parent=MS.gene41873.t1
chr7.4	exon	20158035	20158261	20158035	ID=MS.gene41873.t1.exon2;Parent=MS.gene41873.t1
chr7.4	CDS	20158035	20158261	20158035	ID=cds.MS.gene41873.t1;Parent=MS.gene41873.t1

Gene Sequence

>MS.gene41873

ATGTGCAGTTGGATTTCATCACCTATTCAATCAGGTTTTCAATATTACTTGTGTCTTGTTACTAGTTTTCATTTTATTTTTAGTGGTATGGTTTTGTTTGGATTATATATTATTTATTGTTCAAATTAAATAAAATCTGTTCATGTGCTGAATATAGAATCATAAAGGAGCTATGATGGAGTTAGGGGAGGGGCTATGTAAATTGAGAAAGATGGAGTTCCCTAATGGACCGTTTCTTAAGTTTGAGAAAGATATTTCAGCAGTTTTGGAATTTATCTACCAGACACAGATAGAGTTAGCTGCATGTGAGTAATTCCAACCTTGAAATGTTATGTATCATATGATACATGCAAGTTGTATCTTATTCCGAATCAAAATTGAACTCAGTAAATACAAGTCATTATGCATAGATATGTGTCATGAAGTTCATGTATCTTACCTGTTACCATTCAAGATTAGATTTAATTCACAAATGTTATATGATCGGTTTTGGAGAAATTACATTTTTTAACTTGAATTTGAGCAGGTAGTGATGATGTTTGTGTTGCAATGGATCAATCAGAAAGATCCTACCAACTTATGGGAGAATATGCTGCAGGGAAGCGCGTATATGATCTAGAACTTGGTCGTGATGCATCAGTGTACATTGTGTTCTGCCCTCAAGGGTCTAATGATGCCACTGAAGCTCCAAGGGCAAAGCTTCCCAGGCTTAATGCTACCTCAGAACATCTTGTAGCATATGAATACAAGTAA

Protein sequence

>MS.gene41873.t1

MCSWISSPIQSGSDDVCVAMDQSERSYQLMGEYAAGKRVYDLELGRDASVYIVFCPQGSNDATEAPRAKLPRLNATSEHLVAYEYK