Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58817.t1 | AES65208.1 | 98.5 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 1.70E-104 | 388.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58817.t1 | Q84RQ7 | 70.6 | 204 | 57 | 2 | 1 | 203 | 35 | 236 | 6.2e-71 | 268.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58817.t1 | G7IN05 | 98.5 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 1.2e-104 | 388.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene58817 | 0.8846 | 1.67E-71 | -1.69E-46 |
| MS.gene049171 | MS.gene58817 | 0.832882 | 7.33E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene58817 | 0.801922 | 7.17E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene58817 | 0.831569 | 1.55E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene58817 | 0.844036 | 9.69E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene58817 | 0.815129 | 1.08E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene58817 | 0.80258 | 5.24E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene58817 | 0.805181 | 1.51E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene58817 | 0.83644 | 9.35E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene58817 | 0.833496 | 5.16E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene58817 | 0.815548 | 8.74E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene58817 | 0.863951 | 1.72E-64 | -1.69E-46 |
| MS.gene049488 | MS.gene58817 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene58817 | 0.89184 | 2.75E-74 | -1.69E-46 |
| MS.gene049615 | MS.gene58817 | 0.810598 | 1.06E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene58817 | 0.830179 | 3.40E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene58817 | 0.820262 | 7.53E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene58817 | 0.888416 | 6.02E-73 | -1.69E-46 |
| MS.gene050301 | MS.gene58817 | 0.805952 | 1.04E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene58817 | 0.830881 | 2.29E-55 | -1.69E-46 |
| MS.gene050400 | MS.gene58817 | 0.824658 | 7.16E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene58817 | 0.837433 | 5.21E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene58817 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene58817 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene58817 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene58817 | 0.900614 | 6.14E-78 | -1.69E-46 |
| MS.gene050625 | MS.gene58817 | 0.832256 | 1.05E-55 | -1.69E-46 |
| MS.gene050647 | MS.gene58817 | -0.800791 | 1.22E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene58817 | 0.886435 | 3.43E-72 | -1.69E-46 |
| MS.gene050686 | MS.gene58817 | 0.812775 | 3.58E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene58817 | 0.862579 | 4.59E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene58817 | 0.880131 | 7.06E-70 | -1.69E-46 |
| MS.gene050812 | MS.gene58817 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene58817 | 0.820758 | 5.79E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene58817 | 0.850085 | 2.13E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene58817 | 0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene58817 | 0.894977 | 1.48E-75 | -1.69E-46 |
| MS.gene051360 | MS.gene58817 | 0.816195 | 6.27E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene58817 | 0.88608 | 4.67E-72 | -1.69E-46 |
| MS.gene051525 | MS.gene58817 | 0.847167 | 1.37E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene58817 | 0.824614 | 7.34E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene58817 | 0.896556 | 3.30E-76 | -1.69E-46 |
| MS.gene051692 | MS.gene58817 | 0.897592 | 1.21E-76 | -1.69E-46 |
| MS.gene051694 | MS.gene58817 | 0.841203 | 5.48E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene58817 | 0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene58817 | 0.841384 | 4.91E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene58817 | 0.852759 | 3.74E-61 | -1.69E-46 |
| MS.gene051877 | MS.gene58817 | 0.821446 | 4.02E-53 | -1.69E-46 |
| MS.gene052136 | MS.gene58817 | 0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene58817 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene58817 | 0.829279 | 5.63E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene58817 | 0.84219 | 3.01E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene58817 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene58817 | 0.859167 | 4.99E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene58817 | 0.88166 | 2.00E-70 | -1.69E-46 |
| MS.gene052340 | MS.gene58817 | 0.824417 | 8.16E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene58817 | 0.835857 | 1.31E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene58817 | 0.816918 | 4.32E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene58817 | 0.858062 | 1.07E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene58817 | 0.87739 | 6.53E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene58817 | 0.89834 | 5.84E-77 | -1.69E-46 |
| MS.gene052484 | MS.gene58817 | 0.870678 | 1.22E-66 | -1.69E-46 |
| MS.gene052485 | MS.gene58817 | 0.867461 | 1.35E-65 | -1.69E-46 |
| MS.gene052501 | MS.gene58817 | 0.877652 | 5.29E-69 | -1.69E-46 |
| MS.gene052503 | MS.gene58817 | 0.843099 | 1.73E-58 | -1.69E-46 |
| MS.gene052505 | MS.gene58817 | 0.869353 | 3.30E-66 | -1.69E-46 |
| MS.gene052506 | MS.gene58817 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene052508 | MS.gene58817 | 0.801456 | 8.93E-49 | -1.69E-46 |
| MS.gene052510 | MS.gene58817 | 0.800465 | 1.42E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene58817 | 0.838643 | 2.55E-57 | -1.69E-46 |
| MS.gene052820 | MS.gene58817 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene58817 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene58817 | 0.834452 | 2.97E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene58817 | 0.833237 | 5.99E-56 | -1.69E-46 |
| MS.gene052982 | MS.gene58817 | 0.855773 | 5.04E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene58817 | 0.866191 | 3.42E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene58817 | 0.861308 | 1.12E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene58817 | 0.824907 | 6.26E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene58817 | 0.818984 | 1.47E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene58817 | 0.863688 | 2.08E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene58817 | 0.839279 | 1.74E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene58817 | 0.857779 | 1.29E-62 | -1.69E-46 |
| MS.gene053286 | MS.gene58817 | 0.845183 | 4.76E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene58817 | 0.838816 | 2.30E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene58817 | 0.828689 | 7.82E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene58817 | 0.884664 | 1.58E-71 | -1.69E-46 |
| MS.gene053574 | MS.gene58817 | 0.86586 | 4.35E-65 | -1.69E-46 |
| MS.gene053632 | MS.gene58817 | 0.839374 | 1.65E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene58817 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene58817 | 0.830512 | 2.82E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene58817 | 0.833494 | 5.16E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene58817 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene58817 | 0.819074 | 1.41E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene58817 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene58817 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene054408 | MS.gene58817 | 0.812059 | 5.13E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene58817 | 0.819218 | 1.30E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene58817 | 0.84213 | 3.12E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene58817 | 0.831307 | 1.80E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene58817 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene58817 | 0.857457 | 1.61E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene58817 | 0.830744 | 2.47E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene58817 | 0.872813 | 2.38E-67 | -1.69E-46 |
| MS.gene055116 | MS.gene58817 | 0.873523 | 1.38E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene58817 | 0.867406 | 1.40E-65 | -1.69E-46 |
| MS.gene055212 | MS.gene58817 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene58817 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene58817 | 0.811422 | 7.06E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene58817 | 0.867605 | 1.21E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene58817 | 0.818635 | 1.77E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene58817 | 0.806339 | 8.63E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene58817 | 0.816245 | 6.11E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene58817 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene05553 | MS.gene58817 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene58817 | 0.831339 | 1.77E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene58817 | 0.843805 | 1.12E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene58817 | 0.878391 | 2.92E-69 | -1.69E-46 |
| MS.gene055744 | MS.gene58817 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene055909 | MS.gene58817 | 0.834711 | 2.56E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene58817 | 0.836196 | 1.08E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene58817 | 0.862975 | 3.46E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene58817 | 0.852723 | 3.83E-61 | -1.69E-46 |
| MS.gene056083 | MS.gene58817 | 0.816786 | 4.62E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene58817 | 0.83903 | 2.02E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene58817 | 0.829625 | 4.64E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene58817 | 0.843761 | 1.15E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene58817 | 0.861636 | 8.92E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene58817 | 0.854177 | 1.46E-61 | -1.69E-46 |
| MS.gene056422 | MS.gene58817 | 0.831276 | 1.83E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene58817 | 0.823993 | 1.03E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene58817 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene58817 | 0.901341 | 2.96E-78 | -1.69E-46 |
| MS.gene056514 | MS.gene58817 | 0.808644 | 2.80E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene58817 | 0.801422 | 9.07E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene58817 | 0.86071 | 1.71E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene58817 | 0.809874 | 1.52E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene58817 | 0.850802 | 1.34E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene58817 | 0.830125 | 3.50E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene58817 | 0.823315 | 1.48E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene58817 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene58817 | 0.834618 | 2.70E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene58817 | 0.828876 | 7.05E-55 | -1.69E-46 |
| MS.gene057048 | MS.gene58817 | 0.804585 | 2.01E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene58817 | 0.831075 | 2.05E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene58817 | 0.82713 | 1.85E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene58817 | 0.843021 | 1.81E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene58817 | 0.846663 | 1.89E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene58817 | 0.837743 | 4.34E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene58817 | 0.872699 | 2.60E-67 | -1.69E-46 |
| MS.gene057196 | MS.gene58817 | 0.812116 | 4.98E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene58817 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene057310 | MS.gene58817 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene057330 | MS.gene58817 | 0.817373 | 3.41E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene58817 | 0.873255 | 1.69E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene58817 | 0.807923 | 3.99E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene58817 | 0.904693 | 9.40E-80 | -1.69E-46 |
| MS.gene057658 | MS.gene58817 | 0.830457 | 2.90E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene58817 | 0.870567 | 1.32E-66 | -1.69E-46 |
| MS.gene057749 | MS.gene58817 | 0.85166 | 7.68E-61 | -1.69E-46 |
| MS.gene057823 | MS.gene58817 | 0.856983 | 2.22E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene58817 | 0.868006 | 8.99E-66 | -1.69E-46 |
| MS.gene057857 | MS.gene58817 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene057926 | MS.gene58817 | 0.839198 | 1.83E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene58817 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene58817 | 0.857383 | 1.69E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene58817 | 0.84311 | 1.71E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene58817 | 0.884111 | 2.53E-71 | -1.69E-46 |
| MS.gene05811 | MS.gene58817 | 0.805223 | 1.48E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene58817 | 0.810352 | 1.20E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene58817 | 0.829293 | 5.58E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene58817 | 0.822381 | 2.44E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene58817 | 0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene58817 | 0.866491 | 2.74E-65 | -1.69E-46 |
| MS.gene05837 | MS.gene58817 | 0.80142 | 9.08E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene58817 | 0.841534 | 4.48E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene58817 | 0.848545 | 5.72E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene58817 | 0.832632 | 8.46E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene58817 | 0.855517 | 5.98E-62 | -1.69E-46 |
| MS.gene058700 | MS.gene58817 | 0.85693 | 2.31E-62 | -1.69E-46 |
| MS.gene058790 | MS.gene58817 | 0.809092 | 2.24E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene58817 | 0.846072 | 2.73E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene58817 | 0.823302 | 1.49E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene58817 | 0.832858 | 7.44E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene58817 | 0.808855 | 2.52E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene58817 | 0.839579 | 1.46E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene58817 | 0.829882 | 4.01E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene58817 | 0.84197 | 3.44E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene58817 | 0.803908 | 2.78E-49 | -1.69E-46 |
| MS.gene059141 | MS.gene58817 | 0.845075 | 5.09E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene58817 | 0.873972 | 9.71E-68 | -1.69E-46 |
| MS.gene059366 | MS.gene58817 | 0.803379 | 3.59E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene58817 | 0.803308 | 3.71E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene58817 | 0.824629 | 7.28E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene58817 | 0.868322 | 7.12E-66 | -1.69E-46 |
| MS.gene059536 | MS.gene58817 | 0.880461 | 5.39E-70 | -1.69E-46 |
| MS.gene059597 | MS.gene58817 | 0.825799 | 3.85E-54 | -1.69E-46 |
| MS.gene059674 | MS.gene58817 | 0.817764 | 2.78E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene58817 | 0.854984 | 8.55E-62 | -1.69E-46 |
| MS.gene059677 | MS.gene58817 | 0.800666 | 1.29E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene58817 | 0.889765 | 1.81E-73 | -1.69E-46 |
| MS.gene059692 | MS.gene58817 | 0.86969 | 2.56E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene58817 | 0.874075 | 8.96E-68 | -1.69E-46 |
| MS.gene059711 | MS.gene58817 | 0.828603 | 8.20E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene58817 | 0.837817 | 4.15E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene58817 | 0.821794 | 3.34E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene58817 | 0.832364 | 9.86E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene58817 | 0.849299 | 3.53E-60 | -1.69E-46 |
| MS.gene059933 | MS.gene58817 | 0.806848 | 6.74E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene58817 | 0.838824 | 2.29E-57 | -1.69E-46 |
| MS.gene060193 | MS.gene58817 | 0.846872 | 1.65E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene58817 | 0.95947 | 1.77E-117 | -1.69E-46 |
| MS.gene060469 | MS.gene58817 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene58817 | 0.840067 | 1.09E-57 | -1.69E-46 |
| MS.gene060485 | MS.gene58817 | 0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene58817 | 0.808301 | 3.31E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene58817 | 0.889976 | 1.49E-73 | -1.69E-46 |
| MS.gene060818 | MS.gene58817 | 0.850734 | 1.40E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene58817 | 0.867161 | 1.68E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene58817 | 0.894155 | 3.22E-75 | -1.69E-46 |
| MS.gene06092 | MS.gene58817 | 0.871848 | 5.00E-67 | -1.69E-46 |
| MS.gene06097 | MS.gene58817 | 0.811452 | 6.95E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene58817 | 0.813538 | 2.43E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene58817 | 0.846872 | 1.65E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene58817 | 0.806429 | 8.26E-50 | -1.69E-46 |
| MS.gene061051 | MS.gene58817 | -0.820902 | 5.37E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene58817 | 0.827282 | 1.71E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene58817 | 0.843956 | 1.02E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene58817 | 0.856094 | 4.06E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58817.t1 | MTR_2g036690 | 98.522 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 4.60e-144 | 401 |
| MS.gene58817.t1 | MTR_2g036690 | 97.872 | 141 | 3 | 0 | 1 | 141 | 40 | 180 | 1.74e-97 | 281 |
| MS.gene58817.t1 | MTR_2g005900 | 71.951 | 164 | 46 | 0 | 39 | 202 | 60 | 223 | 2.74e-78 | 234 |
| MS.gene58817.t1 | MTR_2g005900 | 40.217 | 92 | 50 | 2 | 113 | 200 | 53 | 143 | 3.25e-11 | 60.8 |
| MS.gene58817.t1 | MTR_7g109850 | 38.650 | 163 | 94 | 4 | 32 | 191 | 49 | 208 | 2.46e-25 | 98.2 |
| MS.gene58817.t1 | MTR_8g038785 | 44.318 | 88 | 49 | 0 | 31 | 118 | 48 | 135 | 3.14e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58817.t1 | AT4G25910 | 70.588 | 204 | 57 | 2 | 1 | 203 | 35 | 236 | 3.08e-95 | 277 |
| MS.gene58817.t1 | AT5G49940 | 70.787 | 178 | 48 | 1 | 25 | 202 | 62 | 235 | 2.26e-81 | 242 |
| MS.gene58817.t1 | AT5G49940 | 65.812 | 117 | 36 | 1 | 25 | 141 | 62 | 174 | 2.69e-44 | 146 |
| MS.gene58817.t1 | AT5G49940 | 47.297 | 74 | 34 | 2 | 133 | 202 | 85 | 157 | 6.35e-12 | 62.0 |
| MS.gene58817.t1 | AT4G01940 | 36.649 | 191 | 115 | 5 | 2 | 191 | 38 | 223 | 4.80e-26 | 100 |
Find 37 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAACCTGCTTTGTTTCT+TGG | 0.155090 | 2.2:-50405601 | None:intergenic |
| TGTTCAACCTCCAAGATTTC+TGG | 0.161640 | 2.2:-50406292 | None:intergenic |
| GAAATTAGACCATATCTTAT+TGG | 0.195631 | 2.2:+50406724 | MS.gene58817:CDS |
| AGAGAATGTAGAGAAAGTTT+TGG | 0.294107 | 2.2:+50406108 | MS.gene58817:CDS |
| AGACCATATCTTATTGGAAC+TGG | 0.334639 | 2.2:+50406730 | MS.gene58817:CDS |
| CGATAAGATTCCAGAAATCT+TGG | 0.378676 | 2.2:+50406282 | MS.gene58817:CDS |
| ATGATTACATTGTTAAAGTT+CGG | 0.389938 | 2.2:+50406782 | MS.gene58817:CDS |
| CACACGCTCCTTGTAGTTTG+AGG | 0.390945 | 2.2:-50406204 | None:intergenic |
| CGGCTAAGTGGACCGGCAGC+AGG | 0.440486 | 2.2:+50406802 | MS.gene58817:CDS |
| AGCTGCACAGCAGCAATAGA+AGG | 0.442231 | 2.2:-50406874 | None:intergenic |
| TGAAGTAAGGCCTGGTTTGA+TGG | 0.459751 | 2.2:+50406132 | MS.gene58817:CDS |
| CTCAACCATGACATTGAAGA+TGG | 0.471530 | 2.2:+50406240 | MS.gene58817:CDS |
| ATTGTTAAAGTTCGGCTAAG+TGG | 0.495444 | 2.2:+50406790 | MS.gene58817:CDS |
| TCCTTGAAGAATCTTATAGC+AGG | 0.507331 | 2.2:+50405487 | None:intergenic |
| GACCATATCTTATTGGAACT+GGG | 0.523059 | 2.2:+50406731 | MS.gene58817:CDS |
| CATTCTCTTCTGTCAGTGGC+AGG | 0.536464 | 2.2:-50406093 | None:intergenic |
| TCTACATTCTCTTCTGTCAG+TGG | 0.539215 | 2.2:-50406097 | None:intergenic |
| GATCCCCATCTTCAATGTCA+TGG | 0.540108 | 2.2:-50406245 | None:intergenic |
| TAAAGTTCGGCTAAGTGGAC+CGG | 0.546274 | 2.2:+50406795 | MS.gene58817:CDS |
| CCTCCATCAGCCATCAAACC+AGG | 0.556402 | 2.2:-50406142 | None:intergenic |
| GTTGTTATCCTCAAACTACA+AGG | 0.559144 | 2.2:+50406196 | MS.gene58817:CDS |
| GTGGCATTGCATGAGATAGA+TGG | 0.565280 | 2.2:+50406169 | MS.gene58817:CDS |
| TTCAATGTCATGGTTGAGCT+AGG | 0.567639 | 2.2:-50406235 | None:intergenic |
| TCAACCATGACATTGAAGAT+GGG | 0.574515 | 2.2:+50406241 | MS.gene58817:CDS |
| CAGATACTAGATACTGAGAC+TGG | 0.580123 | 2.2:+50406313 | MS.gene58817:CDS |
| TAAGATTCCAGAAATCTTGG+AGG | 0.581548 | 2.2:+50406285 | MS.gene58817:CDS |
| CTGGTTTGATGGCTGATGGA+GGG | 0.590897 | 2.2:+50406143 | MS.gene58817:CDS |
| CCTGGTTTGATGGCTGATGG+AGG | 0.592266 | 2.2:+50406142 | MS.gene58817:CDS |
| GTCAGTGGCAGGACACATCT+CGG | 0.597217 | 2.2:-50406082 | None:intergenic |
| ACCATATCTTATTGGAACTG+GGG | 0.604069 | 2.2:+50406732 | MS.gene58817:CDS |
| CCATATCTTATTGGAACTGG+GGG | 0.604476 | 2.2:+50406733 | MS.gene58817:CDS |
| GATGGCTGATGGAGGGAATG+TGG | 0.613469 | 2.2:+50406150 | MS.gene58817:CDS |
| AGGCCTGGTTTGATGGCTGA+TGG | 0.614038 | 2.2:+50406139 | MS.gene58817:CDS |
| CGTGCTCCAAGAAACAAAGC+AGG | 0.615747 | 2.2:+50405595 | MS.gene58817:CDS |
| CAACCATGACATTGAAGATG+GGG | 0.616574 | 2.2:+50406242 | MS.gene58817:CDS |
| ACTGTCATAACTCCTGCTGC+CGG | 0.622897 | 2.2:-50406814 | None:intergenic |
| CTCAAACTACAAGGAGCGTG+TGG | 0.626569 | 2.2:+50406205 | MS.gene58817:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCATGAATTCATATTA+AGG | - | chr2.2:50405782-50405801 | None:intergenic | 15.0% |
| !!! | ATAAAATTATTCATTTTTCC+AGG | + | chr2.2:50406693-50406712 | MS.gene58817:intron | 15.0% |
| !!! | ATTAATATTAAGCAAGTTTT+CGG | + | chr2.2:50405559-50405578 | MS.gene58817:CDS | 15.0% |
| !!! | GTTAAATTTTAATCAATTCT+TGG | + | chr2.2:50405664-50405683 | MS.gene58817:intron | 15.0% |
| !! | ATGATTACATTGTTAAAGTT+CGG | + | chr2.2:50406782-50406801 | MS.gene58817:CDS | 20.0% |
| !! | GTGATATACAAATGAAATTA+TGG | - | chr2.2:50406408-50406427 | None:intergenic | 20.0% |
| !!! | AATCAATTCTTGGATTTTAT+TGG | + | chr2.2:50405674-50405693 | MS.gene58817:intron | 20.0% |
| !!! | TTAATATTAAGCAAGTTTTC+GGG | + | chr2.2:50405560-50405579 | MS.gene58817:CDS | 20.0% |
| ! | AATTTCTCTACAAACATGTA+AGG | - | chr2.2:50406577-50406596 | None:intergenic | 25.0% |
| ! | GAAATTAGACCATATCTTAT+TGG | + | chr2.2:50406724-50406743 | MS.gene58817:CDS | 25.0% |
| AATGCAAGAAATGATGCATA+AGG | - | chr2.2:50406384-50406403 | None:intergenic | 30.0% | |
| ACTAAGTTGTTTATCCAAAC+AGG | + | chr2.2:50406517-50406536 | MS.gene58817:intron | 30.0% | |
| ! | ACGCTATTCTTGAGATTTTA+TGG | - | chr2.2:50406462-50406481 | None:intergenic | 30.0% |
| ! | AGAGAATGTAGAGAAAGTTT+TGG | + | chr2.2:50406108-50406127 | MS.gene58817:CDS | 30.0% |
| ! | ATGTCGAAAGTGTATGTAAT+TGG | + | chr2.2:50406356-50406375 | MS.gene58817:intron | 30.0% |
| ! | CGCTATTCTTGAGATTTTAT+GGG | - | chr2.2:50406461-50406480 | None:intergenic | 30.0% |
| ! | TACACTTTCGACATTTTCTT+CGG | - | chr2.2:50406350-50406369 | None:intergenic | 30.0% |
| !!! | AGAAAGTTTTGGATGAAGTA+AGG | + | chr2.2:50406119-50406138 | MS.gene58817:CDS | 30.0% |
| !!! | CATTGCAATGTTTTTTTTGC+AGG | + | chr2.2:50406046-50406065 | MS.gene58817:intron | 30.0% |
| ACCATATCTTATTGGAACTG+GGG | + | chr2.2:50406732-50406751 | MS.gene58817:CDS | 35.0% | |
| AGACCATATCTTATTGGAAC+TGG | + | chr2.2:50406730-50406749 | MS.gene58817:CDS | 35.0% | |
| AGTTAAGCACTTACCTTATC+AGG | - | chr2.2:50406500-50406519 | None:intergenic | 35.0% | |
| ATTGTTAAAGTTCGGCTAAG+TGG | + | chr2.2:50406790-50406809 | MS.gene58817:CDS | 35.0% | |
| CGATAAGATTCCAGAAATCT+TGG | + | chr2.2:50406282-50406301 | MS.gene58817:CDS | 35.0% | |
| GAAAACAGTTTGACCTGATA+AGG | + | chr2.2:50406484-50406503 | MS.gene58817:intron | 35.0% | |
| GACCATATCTTATTGGAACT+GGG | + | chr2.2:50406731-50406750 | MS.gene58817:CDS | 35.0% | |
| GTTGTTATCCTCAAACTACA+AGG | + | chr2.2:50406196-50406215 | MS.gene58817:CDS | 35.0% | |
| TAAGATTCCAGAAATCTTGG+AGG | + | chr2.2:50406285-50406304 | MS.gene58817:CDS | 35.0% | |
| TCAACCATGACATTGAAGAT+GGG | + | chr2.2:50406241-50406260 | MS.gene58817:CDS | 35.0% | |
| TTGTGAACTTAGATCCTGTT+TGG | - | chr2.2:50406534-50406553 | None:intergenic | 35.0% | |
| ! | AATGAGTGTTGTGTCTCTAT+TGG | - | chr2.2:50405828-50405847 | None:intergenic | 35.0% |
| ! | ATCTAATCAAGTAGCTTGCA+AGG | + | chr2.2:50405992-50406011 | MS.gene58817:intron | 35.0% |
| ! | GTCTAATTTCTGAAAGAACC+TGG | - | chr2.2:50406714-50406733 | None:intergenic | 35.0% |
| ! | TCTAATCAAGTAGCTTGCAA+GGG | + | chr2.2:50405993-50406012 | MS.gene58817:intron | 35.0% |
| !! | AATGAGAGTTGTTTTCTCAG+AGG | + | chr2.2:50405529-50405548 | MS.gene58817:CDS | 35.0% |
| AACATGTGTCAGTGTCATGT+TGG | + | chr2.2:50405895-50405914 | MS.gene58817:intron | 40.0% | |
| CAACCATGACATTGAAGATG+GGG | + | chr2.2:50406242-50406261 | MS.gene58817:CDS | 40.0% | |
| CACAACACTCATTGACATGT+AGG | + | chr2.2:50405835-50405854 | MS.gene58817:intron | 40.0% | |
| CAGATACTAGATACTGAGAC+TGG | + | chr2.2:50406313-50406332 | MS.gene58817:CDS | 40.0% | |
| CCATATCTTATTGGAACTGG+GGG | + | chr2.2:50406733-50406752 | MS.gene58817:CDS | 40.0% | |
| CTCAACCATGACATTGAAGA+TGG | + | chr2.2:50406240-50406259 | MS.gene58817:CDS | 40.0% | |
| TCTACATTCTCTTCTGTCAG+TGG | - | chr2.2:50406100-50406119 | None:intergenic | 40.0% | |
| TGTTCAACCTCCAAGATTTC+TGG | - | chr2.2:50406295-50406314 | None:intergenic | 40.0% | |
| TTCAATGTCATGGTTGAGCT+AGG | - | chr2.2:50406238-50406257 | None:intergenic | 40.0% | |
| !! | GAAGAACCTGCTTTGTTTCT+TGG | - | chr2.2:50405604-50405623 | None:intergenic | 40.0% |
| CCAAACACGTCGTCAATCTA+AGG | + | chr2.2:50405944-50405963 | MS.gene58817:intron | 45.0% | |
| CCCCCAGTTCCAATAAGATA+TGG | - | chr2.2:50406736-50406755 | None:intergenic | 45.0% | |
| CCTTAGATTGACGACGTGTT+TGG | - | chr2.2:50405947-50405966 | None:intergenic | 45.0% | |
| GATCCCCATCTTCAATGTCA+TGG | - | chr2.2:50406248-50406267 | None:intergenic | 45.0% | |
| GTGGCATTGCATGAGATAGA+TGG | + | chr2.2:50406169-50406188 | MS.gene58817:CDS | 45.0% | |
| TAAAGTTCGGCTAAGTGGAC+CGG | + | chr2.2:50406795-50406814 | MS.gene58817:CDS | 45.0% | |
| TATCTTATTGGAACTGGGGG+AGG | + | chr2.2:50406736-50406755 | MS.gene58817:CDS | 45.0% | |
| ! | TGAAGTAAGGCCTGGTTTGA+TGG | + | chr2.2:50406132-50406151 | MS.gene58817:CDS | 45.0% |
| ! | TTGGTGTCTGACATGTGTCA+GGG | - | chr2.2:50405928-50405947 | None:intergenic | 45.0% |
| !! | GTTTTGGATGAAGTAAGGCC+TGG | + | chr2.2:50406124-50406143 | MS.gene58817:CDS | 45.0% |
| !! | TTTGGTGTCTGACATGTGTC+AGG | - | chr2.2:50405929-50405948 | None:intergenic | 45.0% |
| ACTGTCATAACTCCTGCTGC+CGG | - | chr2.2:50406817-50406836 | None:intergenic | 50.0% | |
| AGCTGCACAGCAGCAATAGA+AGG | - | chr2.2:50406877-50406896 | None:intergenic | 50.0% | |
| CACACGCTCCTTGTAGTTTG+AGG | - | chr2.2:50406207-50406226 | None:intergenic | 50.0% | |
| CATTCTCTTCTGTCAGTGGC+AGG | - | chr2.2:50406096-50406115 | None:intergenic | 50.0% | |
| CGTGCTCCAAGAAACAAAGC+AGG | + | chr2.2:50405595-50405614 | MS.gene58817:CDS | 50.0% | |
| ! | CTCAAACTACAAGGAGCGTG+TGG | + | chr2.2:50406205-50406224 | MS.gene58817:CDS | 50.0% |
| ! | CTGGTTTGATGGCTGATGGA+GGG | + | chr2.2:50406143-50406162 | MS.gene58817:CDS | 50.0% |
| CCTCCATCAGCCATCAAACC+AGG | - | chr2.2:50406145-50406164 | None:intergenic | 55.0% | |
| GATGGCTGATGGAGGGAATG+TGG | + | chr2.2:50406150-50406169 | MS.gene58817:CDS | 55.0% | |
| GTCAGTGGCAGGACACATCT+CGG | - | chr2.2:50406085-50406104 | None:intergenic | 55.0% | |
| ! | AGGCCTGGTTTGATGGCTGA+TGG | + | chr2.2:50406139-50406158 | MS.gene58817:CDS | 55.0% |
| ! | CCTGGTTTGATGGCTGATGG+AGG | + | chr2.2:50406142-50406161 | MS.gene58817:CDS | 55.0% |
| CGGCTAAGTGGACCGGCAGC+AGG | + | chr2.2:50406802-50406821 | MS.gene58817:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 50405496 | 50406906 | 50405496 | ID=MS.gene58817 |
| chr2.2 | mRNA | 50405496 | 50406906 | 50405496 | ID=MS.gene58817.t1;Parent=MS.gene58817 |
| chr2.2 | exon | 50405496 | 50405616 | 50405496 | ID=MS.gene58817.t1.exon1;Parent=MS.gene58817.t1 |
| chr2.2 | CDS | 50405496 | 50405616 | 50405496 | ID=cds.MS.gene58817.t1;Parent=MS.gene58817.t1 |
| chr2.2 | exon | 50406068 | 50406366 | 50406068 | ID=MS.gene58817.t1.exon2;Parent=MS.gene58817.t1 |
| chr2.2 | CDS | 50406068 | 50406366 | 50406068 | ID=cds.MS.gene58817.t1;Parent=MS.gene58817.t1 |
| chr2.2 | exon | 50406715 | 50406906 | 50406715 | ID=MS.gene58817.t1.exon3;Parent=MS.gene58817.t1 |
| chr2.2 | CDS | 50406715 | 50406906 | 50406715 | ID=cds.MS.gene58817.t1;Parent=MS.gene58817.t1 |
| Gene Sequence |
| Protein sequence |
