Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56599.t1 | XP_013464447.1 | 99.4 | 343 | 2 | 0 | 10 | 352 | 79 | 421 | 1.10E-183 | 652.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56599.t1 | Q76FS5 | 76.4 | 343 | 81 | 0 | 9 | 351 | 74 | 416 | 8.6e-145 | 514.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56599.t1 | A0A072V9K7 | 99.4 | 343 | 2 | 0 | 10 | 352 | 79 | 421 | 8.0e-184 | 652.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene56599 | 0.82996 | 3.84E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene56599 | 0.840865 | 6.72E-58 | -1.69E-46 |
| MS.gene049173 | MS.gene56599 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene56599 | 0.845133 | 4.91E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene56599 | 0.872895 | 2.24E-67 | -1.69E-46 |
| MS.gene049232 | MS.gene56599 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene56599 | 0.829994 | 3.77E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene56599 | 0.826469 | 2.67E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene56599 | 0.842508 | 2.48E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene56599 | 0.833345 | 5.63E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene56599 | 0.827439 | 1.56E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene56599 | 0.815753 | 7.87E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene56599 | 0.836705 | 8.00E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene56599 | 0.861008 | 1.39E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene56599 | 0.851026 | 1.16E-60 | -1.69E-46 |
| MS.gene050083 | MS.gene56599 | -0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene56599 | 0.813047 | 3.12E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene56599 | 0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene56599 | 0.833357 | 5.59E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene56599 | 0.813265 | 2.79E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene56599 | 0.837037 | 6.58E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene56599 | 0.820954 | 5.22E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene56599 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene56599 | 0.855565 | 5.79E-62 | -1.69E-46 |
| MS.gene050577 | MS.gene56599 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene56599 | 0.817955 | 2.52E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene56599 | 0.825013 | 5.91E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene56599 | 0.809891 | 1.51E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene56599 | 0.862975 | 3.46E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene56599 | 0.849586 | 2.94E-60 | -1.69E-46 |
| MS.gene050809 | MS.gene56599 | -0.848858 | 4.69E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene56599 | 0.899756 | 1.45E-77 | -1.69E-46 |
| MS.gene050812 | MS.gene56599 | 0.810158 | 1.32E-50 | -1.69E-46 |
| MS.gene05081 | MS.gene56599 | 0.84265 | 2.27E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene56599 | 0.850587 | 1.54E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene56599 | 0.849726 | 2.69E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene56599 | 0.850066 | 2.16E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene56599 | 0.830794 | 2.40E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene56599 | 0.844492 | 7.31E-59 | -1.69E-46 |
| MS.gene051617 | MS.gene56599 | 0.84051 | 8.33E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene56599 | 0.889604 | 2.09E-73 | -1.69E-46 |
| MS.gene051734 | MS.gene56599 | 0.867641 | 1.18E-65 | -1.69E-46 |
| MS.gene051810 | MS.gene56599 | 0.807376 | 5.21E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene56599 | 0.877272 | 7.18E-69 | -1.69E-46 |
| MS.gene051858 | MS.gene56599 | 0.830149 | 3.46E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene56599 | 0.843776 | 1.14E-58 | -1.69E-46 |
| MS.gene052136 | MS.gene56599 | 0.815778 | 7.77E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene56599 | 0.866515 | 2.69E-65 | -1.69E-46 |
| MS.gene052188 | MS.gene56599 | 0.813419 | 2.58E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene56599 | 0.828668 | 7.91E-55 | -1.69E-46 |
| MS.gene05240 | MS.gene56599 | -0.802006 | 6.88E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene56599 | 0.837048 | 6.54E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene56599 | 0.845605 | 3.66E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene56599 | 0.805993 | 1.02E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene56599 | 0.815903 | 7.28E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene56599 | 0.830274 | 3.22E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene56599 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene56599 | 0.821479 | 3.95E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene56599 | 0.819158 | 1.35E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene56599 | 0.823362 | 1.44E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene56599 | 0.818024 | 2.43E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene56599 | 0.820587 | 6.34E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene56599 | 0.840187 | 1.01E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene56599 | 0.855157 | 7.61E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene56599 | 0.829493 | 4.99E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene56599 | 0.84031 | 9.39E-58 | -1.69E-46 |
| MS.gene053104 | MS.gene56599 | 0.871902 | 4.80E-67 | -1.69E-46 |
| MS.gene053203 | MS.gene56599 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene56599 | 0.832258 | 1.05E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene56599 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene56599 | 0.801708 | 7.93E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene56599 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene053449 | MS.gene56599 | 0.828251 | 9.97E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene56599 | 0.846848 | 1.68E-59 | -1.69E-46 |
| MS.gene053626 | MS.gene56599 | 0.816922 | 4.31E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene56599 | 0.868102 | 8.38E-66 | -1.69E-46 |
| MS.gene053824 | MS.gene56599 | 0.864325 | 1.32E-64 | -1.69E-46 |
| MS.gene053912 | MS.gene56599 | 0.835347 | 1.77E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene56599 | 0.900656 | 5.89E-78 | -1.69E-46 |
| MS.gene054003 | MS.gene56599 | 0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene56599 | 0.82477 | 6.74E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene56599 | 0.817244 | 3.65E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene56599 | 0.840644 | 7.68E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene56599 | 0.843707 | 1.19E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene56599 | -0.810558 | 1.09E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene56599 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene56599 | 0.817033 | 4.07E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene56599 | 0.856227 | 3.71E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene56599 | 0.847849 | 8.91E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene56599 | 0.849712 | 2.71E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene56599 | 0.801681 | 8.03E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene56599 | 0.843653 | 1.23E-58 | -1.69E-46 |
| MS.gene055289 | MS.gene56599 | 0.850582 | 1.55E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene56599 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene56599 | 0.848384 | 6.34E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene56599 | 0.869997 | 2.03E-66 | -1.69E-46 |
| MS.gene055722 | MS.gene56599 | 0.841675 | 4.11E-58 | -1.69E-46 |
| MS.gene055741 | MS.gene56599 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene56599 | 0.854899 | 9.05E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene56599 | 0.851643 | 7.76E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene56599 | 0.847084 | 1.45E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene56599 | 0.837376 | 5.39E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene56599 | 0.828998 | 6.58E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene56599 | 0.862642 | 4.39E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene56599 | 0.837511 | 4.98E-57 | -1.69E-46 |
| MS.gene056283 | MS.gene56599 | 0.840073 | 1.08E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene56599 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene56599 | 0.832856 | 7.44E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene56599 | 0.802314 | 5.95E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene56599 | 0.805337 | 1.40E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene56599 | 0.841445 | 4.73E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene56599 | 0.826783 | 2.24E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene56599 | 0.814999 | 1.16E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene56599 | 0.841403 | 4.85E-58 | -1.69E-46 |
| MS.gene056549 | MS.gene56599 | 0.806846 | 6.75E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene56599 | 0.806094 | 9.72E-50 | -1.69E-46 |
| MS.gene05664 | MS.gene56599 | 0.826441 | 2.71E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene56599 | 0.835958 | 1.24E-56 | -1.69E-46 |
| MS.gene05666 | MS.gene56599 | 0.815003 | 1.15E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene56599 | 0.805621 | 1.22E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene56599 | 0.832505 | 9.10E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene56599 | 0.802267 | 6.08E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene56599 | 0.858888 | 6.04E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene56599 | 0.828149 | 1.06E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene56599 | 0.821972 | 3.04E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene56599 | 0.825773 | 3.91E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene56599 | 0.810668 | 1.03E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene56599 | 0.82639 | 2.79E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene56599 | 0.811329 | 7.39E-51 | -1.69E-46 |
| MS.gene057537 | MS.gene56599 | 0.805448 | 1.33E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene56599 | 0.823379 | 1.43E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene56599 | 0.866398 | 2.94E-65 | -1.69E-46 |
| MS.gene057831 | MS.gene56599 | 0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene56599 | 0.822119 | 2.81E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene56599 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene56599 | 0.850965 | 1.21E-60 | -1.69E-46 |
| MS.gene057927 | MS.gene56599 | 0.817971 | 2.50E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene56599 | 0.802356 | 5.83E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene56599 | 0.827335 | 1.66E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene56599 | 0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene56599 | 0.837822 | 4.14E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene56599 | 0.825214 | 5.29E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene56599 | 0.849759 | 2.63E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene56599 | 0.811413 | 7.09E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene56599 | 0.834898 | 2.30E-56 | -1.69E-46 |
| MS.gene058748 | MS.gene56599 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene56599 | 0.821275 | 4.40E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene56599 | 0.851745 | 7.26E-61 | -1.69E-46 |
| MS.gene058928 | MS.gene56599 | 0.801775 | 7.68E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene56599 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene56599 | 0.843804 | 1.12E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene56599 | 0.861527 | 9.63E-64 | -1.69E-46 |
| MS.gene059305 | MS.gene56599 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene56599 | 0.867136 | 1.71E-65 | -1.69E-46 |
| MS.gene059366 | MS.gene56599 | 0.82671 | 2.34E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene56599 | 0.85254 | 4.32E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene56599 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene56599 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene059526 | MS.gene56599 | -0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene56599 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene56599 | 0.849576 | 2.96E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene56599 | 0.815548 | 8.74E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene56599 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene56599 | 0.845671 | 3.51E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene56599 | 0.806299 | 8.80E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene56599 | 0.831546 | 1.57E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene56599 | 0.825978 | 3.49E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene56599 | 0.804623 | 1.98E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene56599 | 0.80283 | 4.66E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene56599 | 0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene56599 | 0.863458 | 2.45E-64 | -1.69E-46 |
| MS.gene060804 | MS.gene56599 | 0.85329 | 2.64E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene56599 | 0.860115 | 2.59E-63 | -1.69E-46 |
| MS.gene060835 | MS.gene56599 | 0.857245 | 1.86E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene56599 | 0.845567 | 3.75E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene56599 | 0.85162 | 7.88E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene56599 | 0.832758 | 7.87E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene56599 | 0.822496 | 2.30E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene56599 | 0.83802 | 3.69E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene56599 | 0.873865 | 1.06E-67 | -1.69E-46 |
| MS.gene061150 | MS.gene56599 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene56599 | 0.805414 | 1.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44511 | MS.gene56599 | PPI |
| MS.gene95988 | MS.gene56599 | PPI |
| MS.gene56598 | MS.gene56599 | PPI |
| MS.gene90447 | MS.gene56599 | PPI |
| MS.gene039281 | MS.gene56599 | PPI |
| MS.gene039280 | MS.gene56599 | PPI |
| MS.gene060982 | MS.gene56599 | PPI |
| MS.gene041919 | MS.gene56599 | PPI |
| MS.gene060981 | MS.gene56599 | PPI |
| MS.gene011755 | MS.gene56599 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56599.t1 | MTR_2g072470 | 96.629 | 356 | 8 | 1 | 1 | 352 | 66 | 421 | 0.0 | 694 |
| MS.gene56599.t1 | MTR_4g095055 | 40.895 | 313 | 171 | 3 | 34 | 332 | 79 | 391 | 3.62e-77 | 243 |
| MS.gene56599.t1 | MTR_4g095055 | 41.176 | 221 | 116 | 3 | 34 | 240 | 79 | 299 | 1.94e-46 | 165 |
| MS.gene56599.t1 | MTR_4g095055 | 39.583 | 96 | 58 | 0 | 237 | 332 | 369 | 464 | 5.70e-17 | 82.4 |
| MS.gene56599.t1 | MTR_5g019460 | 37.402 | 254 | 141 | 6 | 44 | 285 | 91 | 338 | 7.34e-36 | 134 |
| MS.gene56599.t1 | MTR_8g078070 | 37.349 | 249 | 136 | 7 | 44 | 279 | 92 | 333 | 9.78e-36 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56599.t1 | AT1G17050 | 77.844 | 334 | 74 | 0 | 18 | 351 | 83 | 416 | 0.0 | 543 |
| MS.gene56599.t1 | AT1G78510 | 78.443 | 334 | 72 | 0 | 18 | 351 | 72 | 405 | 0.0 | 539 |
| MS.gene56599.t1 | AT1G78510 | 78.443 | 334 | 72 | 0 | 18 | 351 | 33 | 366 | 0.0 | 539 |
| MS.gene56599.t1 | AT2G34630 | 39.809 | 314 | 176 | 3 | 34 | 334 | 85 | 398 | 3.27e-73 | 233 |
| MS.gene56599.t1 | AT2G34630 | 40.067 | 297 | 165 | 3 | 51 | 334 | 1 | 297 | 3.80e-70 | 222 |
| MS.gene56599.t1 | AT4G36810 | 41.176 | 255 | 126 | 9 | 42 | 279 | 85 | 332 | 6.61e-39 | 142 |
| MS.gene56599.t1 | AT2G18620 | 39.850 | 266 | 139 | 9 | 42 | 293 | 64 | 322 | 5.58e-37 | 136 |
| MS.gene56599.t1 | AT2G18640 | 38.000 | 250 | 137 | 7 | 42 | 279 | 90 | 333 | 2.34e-35 | 132 |
| MS.gene56599.t1 | AT3G14510 | 39.331 | 239 | 125 | 6 | 69 | 293 | 27 | 259 | 3.78e-34 | 127 |
| MS.gene56599.t1 | AT3G20160 | 35.827 | 254 | 140 | 8 | 42 | 279 | 59 | 305 | 2.30e-32 | 124 |
| MS.gene56599.t1 | AT3G32040 | 35.955 | 267 | 150 | 7 | 42 | 293 | 75 | 335 | 1.45e-29 | 117 |
| MS.gene56599.t1 | AT2G23800 | 35.857 | 251 | 141 | 9 | 42 | 279 | 94 | 337 | 3.08e-29 | 116 |
| MS.gene56599.t1 | AT3G29430 | 38.075 | 239 | 128 | 6 | 69 | 293 | 100 | 332 | 3.27e-28 | 113 |
| MS.gene56599.t1 | AT3G14550 | 35.955 | 267 | 150 | 8 | 42 | 293 | 75 | 335 | 7.60e-28 | 112 |
| MS.gene56599.t1 | AT3G14550 | 35.955 | 267 | 150 | 8 | 42 | 293 | 75 | 335 | 7.60e-28 | 112 |
| MS.gene56599.t1 | AT3G14550 | 35.955 | 267 | 150 | 8 | 42 | 293 | 75 | 335 | 7.60e-28 | 112 |
| MS.gene56599.t1 | AT3G14530 | 38.075 | 239 | 128 | 7 | 69 | 293 | 103 | 335 | 1.86e-27 | 111 |
| MS.gene56599.t1 | AT3G20160 | 33.603 | 247 | 127 | 8 | 42 | 279 | 59 | 277 | 2.44e-27 | 110 |
| MS.gene56599.t1 | AT1G49530 | 32.444 | 225 | 130 | 6 | 70 | 278 | 78 | 296 | 3.29e-23 | 99.0 |
Find 65 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACCTATTTGGTGAAAT+AGG | 0.152420 | 2.1:-26218375 | None:intergenic |
| CTCAATGATATCCCTCAATT+TGG | 0.156996 | 2.1:-26220487 | None:intergenic |
| GAGACCAGCTCTTGTGTTCT+TGG | 0.226567 | 2.1:+26218982 | MS.gene56599:CDS |
| ACTACTTCAAACAACCTATT+TGG | 0.233446 | 2.1:-26218384 | None:intergenic |
| ACAACCTATTTGGTGAAATA+GGG | 0.248193 | 2.1:-26218374 | None:intergenic |
| TTCTCCAACGCGAAAATTAC+AGG | 0.258160 | 2.1:-26220459 | None:intergenic |
| TTGATTGCTGCCAGTGTAAA+AGG | 0.265491 | 2.1:+26220264 | MS.gene56599:CDS |
| GGCTAAACGTCGATGCTTTA+CGG | 0.286782 | 2.1:-26219183 | None:intergenic |
| TCACTAGCTTACCTCTTCTT+AGG | 0.317476 | 2.1:-26219268 | None:intergenic |
| GAAACTGTTCATCAAATGTT+TGG | 0.338601 | 2.1:+26219732 | MS.gene56599:CDS |
| CCAAGTGGTCGACGACATAT+TGG | 0.366609 | 2.1:+26220365 | MS.gene56599:CDS |
| CAACCCCTATTTCACCAAAT+AGG | 0.381053 | 2.1:+26218370 | MS.gene56599:CDS |
| TTTGGTGAAATAGGGGTTGC+TGG | 0.395241 | 2.1:-26218366 | None:intergenic |
| TCAATGATATCCCTCAATTT+GGG | 0.416555 | 2.1:-26220486 | None:intergenic |
| GAGTCTGAATTTAGCGAGAT+TGG | 0.432083 | 2.1:+26220507 | MS.gene56599:CDS |
| TTGGTGAGGTCCGTGCCTGC+AGG | 0.439447 | 2.1:-26220420 | None:intergenic |
| GCAATTAAAGACCTTGCAAA+AGG | 0.452757 | 2.1:+26218324 | MS.gene56599:CDS |
| TCAGCTGCAGATATTAAAAC+TGG | 0.453325 | 2.1:-26218929 | None:intergenic |
| AGGAGCGGTGAGGTTACCTT+TGG | 0.458442 | 2.1:-26220439 | None:intergenic |
| ATCAAGTTGGTTAAGAGTTG+TGG | 0.459670 | 2.1:+26220546 | MS.gene56599:CDS |
| ACCGAGAAAATGTTCGAATA+CGG | 0.464949 | 2.1:+26220321 | MS.gene56599:CDS |
| TCAAGTTGGTTAAGAGTTGT+GGG | 0.479565 | 2.1:+26220547 | MS.gene56599:CDS |
| CCAATATGTCGTCGACCACT+TGG | 0.480677 | 2.1:-26220365 | None:intergenic |
| ACAAGAGTGGCAGTGCTGGC+TGG | 0.494391 | 2.1:+26219756 | MS.gene56599:CDS |
| ACGCAATCGGCAGAGCAACT+TGG | 0.497280 | 2.1:+26220393 | MS.gene56599:CDS |
| TTCGAATACGGGAAGAATCT+CGG | 0.498347 | 2.1:+26220333 | MS.gene56599:CDS |
| ATGAATCATTTCAACTATCT+CGG | 0.499817 | 2.1:-26219204 | None:intergenic |
| TGGAACAAGAGTGGCAGTGC+TGG | 0.503897 | 2.1:+26219752 | MS.gene56599:CDS |
| ATTGAGTGTTTGAAGATCAT+CGG | 0.505570 | 2.1:-26218409 | None:intergenic |
| ACTTGGAAAGCCTGCAGGCA+CGG | 0.508298 | 2.1:+26220410 | MS.gene56599:CDS |
| CATATTGGATTTCACGCAAT+CGG | 0.510526 | 2.1:+26220380 | MS.gene56599:CDS |
| TCTTTAGTGCTGGTGGGAAG+AGG | 0.511599 | 2.1:+26218957 | MS.gene56599:CDS |
| TGGAGAAAGAACCCAAATTG+AGG | 0.518973 | 2.1:+26220475 | MS.gene56599:CDS |
| GAGCAACTTGGAAAGCCTGC+AGG | 0.520485 | 2.1:+26220405 | MS.gene56599:CDS |
| TCATGTTTGCACAATCATCA+TGG | 0.521316 | 2.1:+26219784 | MS.gene56599:CDS |
| GCTAAACGATACACACTTGG+AGG | 0.522408 | 2.1:-26220639 | None:intergenic |
| GGATGCTCTTGATAGATTGT+AGG | 0.526067 | 2.1:+26218896 | MS.gene56599:intron |
| GGAGAAAGAACCCAAATTGA+GGG | 0.527032 | 2.1:+26220476 | MS.gene56599:CDS |
| CCGAGAAAATGTTCGAATAC+GGG | 0.527115 | 2.1:+26220322 | MS.gene56599:CDS |
| AGTCATTAAACTTATCAGCC+AGG | 0.539916 | 2.1:+26219833 | MS.gene56599:CDS |
| CAACCTATTTGGTGAAATAG+GGG | 0.541722 | 2.1:-26218373 | None:intergenic |
| GACACCAAGAACACAAGAGC+TGG | 0.548114 | 2.1:-26218986 | None:intergenic |
| GCTGAGCAGATCTTTAGTGC+TGG | 0.564731 | 2.1:+26218947 | MS.gene56599:CDS |
| GAGCAGATCTTTAGTGCTGG+TGG | 0.569958 | 2.1:+26218950 | MS.gene56599:CDS |
| TCGTTTAGCTCTTGAGGACA+TGG | 0.571941 | 2.1:+26220653 | MS.gene56599:CDS |
| AGCAGATCTTTAGTGCTGGT+GGG | 0.574274 | 2.1:+26218951 | MS.gene56599:CDS |
| GATGAGAGTGACCTAAGAAG+AGG | 0.576816 | 2.1:+26219257 | MS.gene56599:CDS |
| TGGTGACATATAATCTTCAA+AGG | 0.582035 | 2.1:+26220673 | MS.gene56599:CDS |
| AATCGAAAGAGCACAAGAGT+TGG | 0.582560 | 2.1:+26220572 | MS.gene56599:CDS |
| TGTGTATCGTTTAGCTCTTG+AGG | 0.586196 | 2.1:+26220647 | MS.gene56599:CDS |
| AAGTTGGTTAAGAGTTGTGG+GGG | 0.591345 | 2.1:+26220549 | MS.gene56599:CDS |
| TATGTCGTCGACCACTTGGA+AGG | 0.598026 | 2.1:-26220361 | None:intergenic |
| CGGTGAGGTTACCTTTGGTG+AGG | 0.606152 | 2.1:-26220434 | None:intergenic |
| TCAAATGTTTGGAACAAGAG+TGG | 0.606800 | 2.1:+26219743 | MS.gene56599:CDS |
| AGAGCGACCGCAGAACTACA+TGG | 0.608016 | 2.1:+26219010 | MS.gene56599:CDS |
| TCTTGACGAAGCGATCAAGT+TGG | 0.618929 | 2.1:+26220533 | MS.gene56599:CDS |
| TGCTGCCAGTGTAAAAGGAG+CGG | 0.624409 | 2.1:+26220269 | MS.gene56599:CDS |
| AGAGCTAAACGATACACACT+TGG | 0.629738 | 2.1:-26220642 | None:intergenic |
| CTCAAGGCCATGTAGTTCTG+CGG | 0.632644 | 2.1:-26219017 | None:intergenic |
| GCAGGCACGGACCTCACCAA+AGG | 0.634461 | 2.1:+26220423 | MS.gene56599:CDS |
| CAAGTTGGTTAAGAGTTGTG+GGG | 0.643343 | 2.1:+26220548 | MS.gene56599:CDS |
| CGAAAATTACAGGAGCGGTG+AGG | 0.666110 | 2.1:-26220449 | None:intergenic |
| TCTCGGTCTCTCCTTCCAAG+TGG | 0.690117 | 2.1:+26220350 | MS.gene56599:CDS |
| CAACGCGAAAATTACAGGAG+CGG | 0.691950 | 2.1:-26220454 | None:intergenic |
| TACACTGGCAGCAATCAAGG+AGG | 0.700199 | 2.1:-26220259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAAAAAATCATTATTT+CGG | + | chr2.1:26220046-26220065 | MS.gene56599:intron | 10.0% |
| !!! | TTTTATTTTTGCAAAATTTT+TGG | + | chr2.1:26220123-26220142 | MS.gene56599:intron | 10.0% |
| !! | TAAAAACAATGTTTAGAAAA+TGG | - | chr2.1:26220108-26220127 | None:intergenic | 15.0% |
| !! | TGATCAAATAAATTATAACA+TGG | - | chr2.1:26219420-26219439 | None:intergenic | 15.0% |
| !!! | TAACTTGTTTTGAATTAATA+GGG | + | chr2.1:26219706-26219725 | MS.gene56599:intron | 15.0% |
| !!! | TTTTGTTTTCAAATTAGTAT+CGG | + | chr2.1:26218207-26218226 | MS.gene56599:intron | 15.0% |
| !! | AAGTAATTGATATCCATTTA+AGG | - | chr2.1:26219983-26220002 | None:intergenic | 20.0% |
| !! | AATATGAAAGAACATATGTT+AGG | + | chr2.1:26219946-26219965 | MS.gene56599:intron | 20.0% |
| !! | AGTAATTGATATCCATTTAA+GGG | - | chr2.1:26219982-26220001 | None:intergenic | 20.0% |
| !! | ATATGTTAATTTAACTGATG+AGG | + | chr2.1:26218875-26218894 | MS.gene56599:intron | 20.0% |
| !! | CATCAGTTAAATTAACATAT+AGG | - | chr2.1:26218875-26218894 | None:intergenic | 20.0% |
| !! | TGGTATATACATTCATAAAA+AGG | + | chr2.1:26219584-26219603 | MS.gene56599:intron | 20.0% |
| !!! | AGATATTAAAACTGGATTTT+CGG | - | chr2.1:26218924-26218943 | None:intergenic | 20.0% |
| !!! | AGTATGACAAAAATTGATTT+AGG | - | chr2.1:26219371-26219390 | None:intergenic | 20.0% |
| !!! | ATTGTTCATTGATTTTAAAC+AGG | + | chr2.1:26218590-26218609 | MS.gene56599:intron | 20.0% |
| !!! | CTAACTTGTTTTGAATTAAT+AGG | + | chr2.1:26219705-26219724 | MS.gene56599:intron | 20.0% |
| !!! | GTATGACAAAAATTGATTTA+GGG | - | chr2.1:26219370-26219389 | None:intergenic | 20.0% |
| !!! | TCAATTTTTGTCATACTTTA+CGG | + | chr2.1:26219374-26219393 | MS.gene56599:intron | 20.0% |
| ! | AAGCTAGTGATATTTAGAAA+TGG | + | chr2.1:26219281-26219300 | MS.gene56599:intron | 25.0% |
| ! | AATGGATATCAATTACTTCA+AGG | + | chr2.1:26219985-26220004 | MS.gene56599:intron | 25.0% |
| ! | AGTATTGCTTTCTATATTCA+TGG | + | chr2.1:26218450-26218469 | MS.gene56599:intron | 25.0% |
| ! | ATATGTTCTTTCATATTCAC+CGG | - | chr2.1:26219943-26219962 | None:intergenic | 25.0% |
| ! | ATCTTGAAATGAATGATTTC+AGG | + | chr2.1:26219153-26219172 | MS.gene56599:intron | 25.0% |
| ! | ATGAATCATTTCAACTATCT+CGG | - | chr2.1:26219207-26219226 | None:intergenic | 25.0% |
| ! | ATGGATATCAATTACTTCAA+GGG | + | chr2.1:26219986-26220005 | MS.gene56599:intron | 25.0% |
| ! | ATGTATATACCAATTTGTCA+AGG | - | chr2.1:26219576-26219595 | None:intergenic | 25.0% |
| ! | CAATATCTGACAATTCTATT+AGG | - | chr2.1:26218144-26218163 | None:intergenic | 25.0% |
| ! | CCAAATTAAAACAAAGTTTC+AGG | - | chr2.1:26219472-26219491 | None:intergenic | 25.0% |
| ! | CCTGAAAATTCTATGTAAAT+AGG | + | chr2.1:26219109-26219128 | MS.gene56599:intron | 25.0% |
| ! | GTAAGTGAATGAATATATGT+TGG | + | chr2.1:26218239-26218258 | MS.gene56599:intron | 25.0% |
| ! | GTAATTGATATCCATTTAAG+GGG | - | chr2.1:26219981-26220000 | None:intergenic | 25.0% |
| ! | TAGATGGAAAAGAAAAAACA+AGG | - | chr2.1:26219641-26219660 | None:intergenic | 25.0% |
| ! | TCTTGAAATGAATGATTTCA+GGG | + | chr2.1:26219154-26219173 | MS.gene56599:intron | 25.0% |
| !! | ATCTGAAAAATCGGTTTAAA+CGG | - | chr2.1:26217862-26217881 | None:intergenic | 25.0% |
| !! | CCTATTTACATAGAATTTTC+AGG | - | chr2.1:26219112-26219131 | None:intergenic | 25.0% |
| !! | TAATGACTTCAATGTTTTCA+AGG | - | chr2.1:26219821-26219840 | None:intergenic | 25.0% |
| !!! | ATTTGGTTTGGTTTTTGAAT+AGG | + | chr2.1:26218297-26218316 | MS.gene56599:intron | 25.0% |
| !!! | CCTGAAACTTTGTTTTAATT+TGG | + | chr2.1:26219469-26219488 | MS.gene56599:intron | 25.0% |
| !!! | TTGTTTTGAATTAATAGGGA+AGG | + | chr2.1:26219710-26219729 | MS.gene56599:intron | 25.0% |
| ACTACTTCAAACAACCTATT+TGG | - | chr2.1:26218387-26218406 | None:intergenic | 30.0% | |
| ATCAATTACTTCAAGGGATT+GGG | + | chr2.1:26219992-26220011 | MS.gene56599:intron | 30.0% | |
| ATTGAGTGTTTGAAGATCAT+CGG | - | chr2.1:26218412-26218431 | None:intergenic | 30.0% | |
| CAGATTTGTATACTTACTCA+AGG | - | chr2.1:26219036-26219055 | None:intergenic | 30.0% | |
| GAAACTGTTCATCAAATGTT+TGG | + | chr2.1:26219732-26219751 | MS.gene56599:CDS | 30.0% | |
| GAAAGAACATATGTTAGGAT+AGG | + | chr2.1:26219951-26219970 | MS.gene56599:intron | 30.0% | |
| GATTGAATGTTACATGTGTT+TGG | - | chr2.1:26218174-26218193 | None:intergenic | 30.0% | |
| TATCAATTACTTCAAGGGAT+TGG | + | chr2.1:26219991-26220010 | MS.gene56599:intron | 30.0% | |
| TATGTATCACCTTGACAAAT+TGG | + | chr2.1:26219564-26219583 | MS.gene56599:intron | 30.0% | |
| TATGTTCTTTCATATTCACC+GGG | - | chr2.1:26219942-26219961 | None:intergenic | 30.0% | |
| TCAATGATATCCCTCAATTT+GGG | - | chr2.1:26220489-26220508 | None:intergenic | 30.0% | |
| TGGTGACATATAATCTTCAA+AGG | + | chr2.1:26220673-26220692 | MS.gene56599:CDS | 30.0% | |
| TGTGCGATGTAATTCATAAA+CGG | - | chr2.1:26218069-26218088 | None:intergenic | 30.0% | |
| TTATGAATTACATCGCACAA+TGG | + | chr2.1:26218070-26218089 | MS.gene56599:intron | 30.0% | |
| TTGTATGAGTCATTACATGT+CGG | + | chr2.1:26219511-26219530 | MS.gene56599:intron | 30.0% | |
| TTTCAAATTCTGCTATGCTA+TGG | + | chr2.1:26218743-26218762 | MS.gene56599:intron | 30.0% | |
| TTTCTGCTTATGATCATGTT+TGG | + | chr2.1:26219333-26219352 | MS.gene56599:intron | 30.0% | |
| ! | AACAACCTATTTGGTGAAAT+AGG | - | chr2.1:26218378-26218397 | None:intergenic | 30.0% |
| ! | AACTTTGGCATTGAAAGATT+TGG | + | chr2.1:26218280-26218299 | MS.gene56599:intron | 30.0% |
| ! | ACAACCTATTTGGTGAAATA+GGG | - | chr2.1:26218377-26218396 | None:intergenic | 30.0% |
| ! | CTTTGCAAAGCATTAACAAA+CGG | - | chr2.1:26217963-26217982 | None:intergenic | 30.0% |
| ! | GTGATTAAAGATTTTGCTAG+TGG | + | chr2.1:26220156-26220175 | MS.gene56599:CDS | 30.0% |
| ! | TCTGAAAAATCGGTTTAAAC+GGG | - | chr2.1:26217861-26217880 | None:intergenic | 30.0% |
| ! | TTTGCAAAGCATTAACAAAC+GGG | - | chr2.1:26217962-26217981 | None:intergenic | 30.0% |
| ! | TTTTCAACGTTGTATGATGA+TGG | - | chr2.1:26219865-26219884 | None:intergenic | 30.0% |
| !! | GTTTAAACCGATTTTTCAGA+TGG | + | chr2.1:26217861-26217880 | MS.gene56599:intron | 30.0% |
| !! | TGATTTTAGAAGTGGAACTT+TGG | + | chr2.1:26218265-26218284 | MS.gene56599:intron | 30.0% |
| !!! | GTTGGTATTGATTTTAGAAG+TGG | + | chr2.1:26218257-26218276 | MS.gene56599:intron | 30.0% |
| !!! | TTTTCAAATTAGTATCGGTC+TGG | + | chr2.1:26218212-26218231 | MS.gene56599:intron | 30.0% |
| ACCGAGAAAATGTTCGAATA+CGG | + | chr2.1:26220321-26220340 | MS.gene56599:CDS | 35.0% | |
| AGAAAAGCTGAAAAGCAAGA+AGG | - | chr2.1:26218818-26218837 | None:intergenic | 35.0% | |
| AGTCATTAAACTTATCAGCC+AGG | + | chr2.1:26219833-26219852 | MS.gene56599:CDS | 35.0% | |
| CATATTGGATTTCACGCAAT+CGG | + | chr2.1:26220380-26220399 | MS.gene56599:CDS | 35.0% | |
| CTCAATGATATCCCTCAATT+TGG | - | chr2.1:26220490-26220509 | None:intergenic | 35.0% | |
| GCAATTAAAGACCTTGCAAA+AGG | + | chr2.1:26218324-26218343 | MS.gene56599:CDS | 35.0% | |
| TCAGCTGCAGATATTAAAAC+TGG | - | chr2.1:26218932-26218951 | None:intergenic | 35.0% | |
| TCATGTTTGCACAATCATCA+TGG | + | chr2.1:26219784-26219803 | MS.gene56599:CDS | 35.0% | |
| TCGGCTTAACTAAACAAGTT+AGG | - | chr2.1:26217986-26218005 | None:intergenic | 35.0% | |
| TTCAGCATACCAGAAAAATG+TGG | + | chr2.1:26218558-26218577 | MS.gene56599:intron | 35.0% | |
| ! | AAATCGGTTTAAACGGGTTT+CGG | - | chr2.1:26217855-26217874 | None:intergenic | 35.0% |
| ! | AGTGTAGCGGAATTCAAAAA+TGG | - | chr2.1:26218646-26218665 | None:intergenic | 35.0% |
| ! | CAACCTATTTGGTGAAATAG+GGG | - | chr2.1:26218376-26218395 | None:intergenic | 35.0% |
| ! | GCATATCATCCACATTTTTC+TGG | - | chr2.1:26218570-26218589 | None:intergenic | 35.0% |
| ! | TAGCTGCTATTTGACAATAC+TGG | + | chr2.1:26218771-26218790 | MS.gene56599:intron | 35.0% |
| ! | TCAAATGTTTGGAACAAGAG+TGG | + | chr2.1:26219743-26219762 | MS.gene56599:CDS | 35.0% |
| ! | TCAAGTTCAATCCTTTTGCA+AGG | - | chr2.1:26218338-26218357 | None:intergenic | 35.0% |
| ! | TGGCATTGAAAGATTTGGTT+TGG | + | chr2.1:26218285-26218304 | MS.gene56599:intron | 35.0% |
| !! | AAACCGATTTTTCAGATGGA+CGG | + | chr2.1:26217865-26217884 | MS.gene56599:intron | 35.0% |
| !! | AGAGATTCTTTCTGAAGTAG+AGG | - | chr2.1:26218015-26218034 | None:intergenic | 35.0% |
| !! | ATCAAGTTGGTTAAGAGTTG+TGG | + | chr2.1:26220546-26220565 | MS.gene56599:CDS | 35.0% |
| !! | GACTTCAATGTTTTCAAGGT+TGG | - | chr2.1:26219817-26219836 | None:intergenic | 35.0% |
| !! | TCAAGTTGGTTAAGAGTTGT+GGG | + | chr2.1:26220547-26220566 | MS.gene56599:CDS | 35.0% |
| !! | TTAAACGGGTTTCGGTTTTA+CGG | - | chr2.1:26217847-26217866 | None:intergenic | 35.0% |
| !!! | CAAAATTTTTGGTGTGTGAC+AGG | + | chr2.1:26220134-26220153 | MS.gene56599:intron | 35.0% |
| !!! | GTGTGCTGTTTTTTACTATC+TGG | + | chr2.1:26218474-26218493 | MS.gene56599:intron | 35.0% |
| !!! | TGGTTTGGTTTTTGAATAGG+TGG | + | chr2.1:26218300-26218319 | MS.gene56599:intron | 35.0% |
| ACCACATCGAGTTTGAATAG+AGG | - | chr2.1:26219683-26219702 | None:intergenic | 40.0% | |
| ACTATAGCGCTATAGTGTAG+CGG | - | chr2.1:26218659-26218678 | None:intergenic | 40.0% | |
| AGAGCTAAACGATACACACT+TGG | - | chr2.1:26220645-26220664 | None:intergenic | 40.0% | |
| ATCCCGTCCATCTGAAAAAT+CGG | - | chr2.1:26217871-26217890 | None:intergenic | 40.0% | |
| CAACCCCTATTTCACCAAAT+AGG | + | chr2.1:26218370-26218389 | MS.gene56599:CDS | 40.0% | |
| CCGAGAAAATGTTCGAATAC+GGG | + | chr2.1:26220322-26220341 | MS.gene56599:CDS | 40.0% | |
| CGAGTTTGAATAGAGGCAAA+TGG | - | chr2.1:26219676-26219695 | None:intergenic | 40.0% | |
| GAGTCTGAATTTAGCGAGAT+TGG | + | chr2.1:26220507-26220526 | MS.gene56599:CDS | 40.0% | |
| GCAGATGCAAGTGAATGATA+AGG | - | chr2.1:26219891-26219910 | None:intergenic | 40.0% | |
| GGAGAAAGAACCCAAATTGA+GGG | + | chr2.1:26220476-26220495 | MS.gene56599:CDS | 40.0% | |
| GGATGCTCTTGATAGATTGT+AGG | + | chr2.1:26218896-26218915 | MS.gene56599:intron | 40.0% | |
| TCCTTTACACCTCACACATA+TGG | + | chr2.1:26219446-26219465 | MS.gene56599:intron | 40.0% | |
| TGGAGAAAGAACCCAAATTG+AGG | + | chr2.1:26220475-26220494 | MS.gene56599:CDS | 40.0% | |
| TTCGAATACGGGAAGAATCT+CGG | + | chr2.1:26220333-26220352 | MS.gene56599:CDS | 40.0% | |
| TTCTCCAACGCGAAAATTAC+AGG | - | chr2.1:26220462-26220481 | None:intergenic | 40.0% | |
| TTGATTGCTGCCAGTGTAAA+AGG | + | chr2.1:26220264-26220283 | MS.gene56599:CDS | 40.0% | |
| TTGTCAAATAGCCGCTATTG+CGG | - | chr2.1:26218683-26218702 | None:intergenic | 40.0% | |
| ! | AAGTTGGTTAAGAGTTGTGG+GGG | + | chr2.1:26220549-26220568 | MS.gene56599:CDS | 40.0% |
| ! | AATCGAAAGAGCACAAGAGT+TGG | + | chr2.1:26220572-26220591 | MS.gene56599:CDS | 40.0% |
| ! | CCCGTATTCGAACATTTTCT+CGG | - | chr2.1:26220325-26220344 | None:intergenic | 40.0% |
| ! | TCACTAGCTTACCTCTTCTT+AGG | - | chr2.1:26219271-26219290 | None:intergenic | 40.0% |
| ! | TCTGAAGTAGAGGTGGAAAT+CGG | - | chr2.1:26218005-26218024 | None:intergenic | 40.0% |
| ! | TTCTTTTCCATCTACTCTGC+TGG | + | chr2.1:26219647-26219666 | MS.gene56599:intron | 40.0% |
| ! | TTTTACACTGGCAGCAATCA+AGG | - | chr2.1:26220265-26220284 | None:intergenic | 40.0% |
| !! | AACCGATTTTTCAGATGGAC+GGG | + | chr2.1:26217866-26217885 | MS.gene56599:intron | 40.0% |
| !! | ATTTTTCAGATGGACGGGAT+TGG | + | chr2.1:26217871-26217890 | MS.gene56599:intron | 40.0% |
| !! | CAAGTTGGTTAAGAGTTGTG+GGG | + | chr2.1:26220548-26220567 | MS.gene56599:CDS | 40.0% |
| !! | GATTCTTTCTGAAGTAGAGG+TGG | - | chr2.1:26218012-26218031 | None:intergenic | 40.0% |
| !! | GTTTCGGTTTTACGGGTTAT+CGG | - | chr2.1:26217839-26217858 | None:intergenic | 40.0% |
| !! | TAAACGGGTTTCGGTTTTAC+GGG | - | chr2.1:26217846-26217865 | None:intergenic | 40.0% |
| !! | TGTGTATCGTTTAGCTCTTG+AGG | + | chr2.1:26220647-26220666 | MS.gene56599:CDS | 40.0% |
| !! | TTACGGGTTATCGGTTTGTA+CGG | - | chr2.1:26217830-26217849 | None:intergenic | 40.0% |
| !! | TTTTTCAGATGGACGGGATT+GGG | + | chr2.1:26217872-26217891 | MS.gene56599:intron | 40.0% |
| AGTTTCAGGCCATATGTGTG+AGG | - | chr2.1:26219458-26219477 | None:intergenic | 45.0% | |
| CAACGCGAAAATTACAGGAG+CGG | - | chr2.1:26220457-26220476 | None:intergenic | 45.0% | |
| GATGAGAGTGACCTAAGAAG+AGG | + | chr2.1:26219257-26219276 | MS.gene56599:CDS | 45.0% | |
| GCCATATGTGTGAGGTGTAA+AGG | - | chr2.1:26219450-26219469 | None:intergenic | 45.0% | |
| GCCTCTATTCAAACTCGATG+TGG | + | chr2.1:26219679-26219698 | MS.gene56599:intron | 45.0% | |
| GCTAAACGATACACACTTGG+AGG | - | chr2.1:26220642-26220661 | None:intergenic | 45.0% | |
| GGATAGGTCAACCCCTTAAA+TGG | + | chr2.1:26219967-26219986 | MS.gene56599:intron | 45.0% | |
| GGCTAAACGTCGATGCTTTA+CGG | - | chr2.1:26219186-26219205 | None:intergenic | 45.0% | |
| TCTTGACGAAGCGATCAAGT+TGG | + | chr2.1:26220533-26220552 | MS.gene56599:CDS | 45.0% | |
| TCTTTCATATTCACCGGGCA+GGG | - | chr2.1:26219937-26219956 | None:intergenic | 45.0% | |
| TTCTTTCATATTCACCGGGC+AGG | - | chr2.1:26219938-26219957 | None:intergenic | 45.0% | |
| TTTGGTGAAATAGGGGTTGC+TGG | - | chr2.1:26218369-26218388 | None:intergenic | 45.0% | |
| ! | ACTTGCGTGCAGGGTTATTT+TGG | + | chr2.1:26220021-26220040 | MS.gene56599:intron | 45.0% |
| ! | CAAAGCATTAACAAACGGGC+GGG | - | chr2.1:26217958-26217977 | None:intergenic | 45.0% |
| ! | GCAAAGCATTAACAAACGGG+CGG | - | chr2.1:26217959-26217978 | None:intergenic | 45.0% |
| !! | AGCAGATCTTTAGTGCTGGT+GGG | + | chr2.1:26218951-26218970 | MS.gene56599:CDS | 45.0% |
| !! | GGTTATCGGTTTGTACGGTT+CGG | - | chr2.1:26217825-26217844 | None:intergenic | 45.0% |
| !! | GTATGATGATGGAACTCACC+TGG | - | chr2.1:26219854-26219873 | None:intergenic | 45.0% |
| !! | TCGTTTAGCTCTTGAGGACA+TGG | + | chr2.1:26220653-26220672 | MS.gene56599:CDS | 45.0% |
| !! | TTTGTACGGTTCGGTGGATA+CGG | - | chr2.1:26217816-26217835 | None:intergenic | 45.0% |
| AATAACCCTGCACGCAAGTG+TGG | - | chr2.1:26220020-26220039 | None:intergenic | 50.0% | |
| ATGGAGACCAGCAGAGTAGA+TGG | - | chr2.1:26219657-26219676 | None:intergenic | 50.0% | |
| CCAAGTGGTCGACGACATAT+TGG | + | chr2.1:26220365-26220384 | MS.gene56599:CDS | 50.0% | |
| CCAATATGTCGTCGACCACT+TGG | - | chr2.1:26220368-26220387 | None:intergenic | 50.0% | |
| CGAAAATTACAGGAGCGGTG+AGG | - | chr2.1:26220452-26220471 | None:intergenic | 50.0% | |
| GAAAAGCAAGAAGGCTCAGC+AGG | - | chr2.1:26218809-26218828 | None:intergenic | 50.0% | |
| GACACCAAGAACACAAGAGC+TGG | - | chr2.1:26218989-26219008 | None:intergenic | 50.0% | |
| GAGACCAGCTCTTGTGTTCT+TGG | + | chr2.1:26218982-26219001 | MS.gene56599:CDS | 50.0% | |
| GCGCTATAGTACCGCAATAG+CGG | + | chr2.1:26218669-26218688 | MS.gene56599:intron | 50.0% | |
| GCTGAGCAGATCTTTAGTGC+TGG | + | chr2.1:26218947-26218966 | MS.gene56599:CDS | 50.0% | |
| TACACTGGCAGCAATCAAGG+AGG | - | chr2.1:26220262-26220281 | None:intergenic | 50.0% | |
| TATGTCGTCGACCACTTGGA+AGG | - | chr2.1:26220364-26220383 | None:intergenic | 50.0% | |
| TGCTGCCAGTGTAAAAGGAG+CGG | + | chr2.1:26220269-26220288 | MS.gene56599:CDS | 50.0% | |
| TTCCAAGATTCAACCCTGCC+CGG | + | chr2.1:26219921-26219940 | MS.gene56599:intron | 50.0% | |
| TTGAGATAGCACCCGTGGTT+TGG | + | chr2.1:26217897-26217916 | MS.gene56599:intron | 50.0% | |
| ! | AAACCACGGGTGCTATCTCA+AGG | - | chr2.1:26217898-26217917 | None:intergenic | 50.0% |
| ! | AAAGGAGCGGCAGTTTTCAG+CGG | + | chr2.1:26220282-26220301 | MS.gene56599:CDS | 50.0% |
| ! | AACTGCCGCTCCTTTTACAC+TGG | - | chr2.1:26220277-26220296 | None:intergenic | 50.0% |
| ! | CATTAACAAACGGGCGGGTT+CGG | - | chr2.1:26217953-26217972 | None:intergenic | 50.0% |
| ! | CGCTCCTGTAATTTTCGCGT+TGG | + | chr2.1:26220455-26220474 | MS.gene56599:CDS | 50.0% |
| ! | CTCAAGGCCATGTAGTTCTG+CGG | - | chr2.1:26219020-26219039 | None:intergenic | 50.0% |
| ! | GAGCAGATCTTTAGTGCTGG+TGG | + | chr2.1:26218950-26218969 | MS.gene56599:CDS | 50.0% |
| !! | TATCGGTTTGTACGGTTCGG+TGG | - | chr2.1:26217822-26217841 | None:intergenic | 50.0% |
| !! | TCTTTAGTGCTGGTGGGAAG+AGG | + | chr2.1:26218957-26218976 | MS.gene56599:CDS | 50.0% |
| !! | TTGTACGGTTCGGTGGATAC+GGG | - | chr2.1:26217815-26217834 | None:intergenic | 50.0% |
| ACCCAATCCGGTCCAAACCA+CGG | - | chr2.1:26217912-26217931 | None:intergenic | 55.0% | |
| ACGCAATCGGCAGAGCAACT+TGG | + | chr2.1:26220393-26220412 | MS.gene56599:CDS | 55.0% | |
| ACTTGGAAAGCCTGCAGGCA+CGG | + | chr2.1:26220410-26220429 | MS.gene56599:CDS | 55.0% | |
| AGAGCGACCGCAGAACTACA+TGG | + | chr2.1:26219010-26219029 | MS.gene56599:CDS | 55.0% | |
| AGGAGCGGTGAGGTTACCTT+TGG | - | chr2.1:26220442-26220461 | None:intergenic | 55.0% | |
| CGGTGAGGTTACCTTTGGTG+AGG | - | chr2.1:26220437-26220456 | None:intergenic | 55.0% | |
| GAGCAACTTGGAAAGCCTGC+AGG | + | chr2.1:26220405-26220424 | MS.gene56599:CDS | 55.0% | |
| TCGGGCTCAAACACCCAATC+CGG | - | chr2.1:26217924-26217943 | None:intergenic | 55.0% | |
| TCTCGGTCTCTCCTTCCAAG+TGG | + | chr2.1:26220350-26220369 | MS.gene56599:CDS | 55.0% | |
| TGGAACAAGAGTGGCAGTGC+TGG | + | chr2.1:26219752-26219771 | MS.gene56599:CDS | 55.0% | |
| ! | ATAGCACCCGTGGTTTGGAC+CGG | + | chr2.1:26217902-26217921 | MS.gene56599:intron | 55.0% |
| CACCGGGCAGGGTTGAATCT+TGG | - | chr2.1:26219926-26219945 | None:intergenic | 60.0% | |
| CCCAATCCGGTCCAAACCAC+GGG | - | chr2.1:26217911-26217930 | None:intergenic | 60.0% | |
| ! | AACAAACGGGCGGGTTCGGA+CGG | - | chr2.1:26217949-26217968 | None:intergenic | 60.0% |
| ! | ACCCGTGGTTTGGACCGGAT+TGG | + | chr2.1:26217907-26217926 | MS.gene56599:intron | 60.0% |
| ! | CCCGTGGTTTGGACCGGATT+GGG | + | chr2.1:26217908-26217927 | MS.gene56599:intron | 60.0% |
| !! | ACAAGAGTGGCAGTGCTGGC+TGG | + | chr2.1:26219756-26219775 | MS.gene56599:CDS | 60.0% |
| !! | ACGGTTCGGTGGATACGGGT+TGG | - | chr2.1:26217811-26217830 | None:intergenic | 60.0% |
| GCAGGCACGGACCTCACCAA+AGG | + | chr2.1:26220423-26220442 | MS.gene56599:CDS | 65.0% | |
| GGGCCTTGAGATAGCACCCG+TGG | + | chr2.1:26217892-26217911 | MS.gene56599:intron | 65.0% | |
| GGGCTCCACACTTGCGTGCA+GGG | + | chr2.1:26220012-26220031 | MS.gene56599:intron | 65.0% | |
| TGGGCTCCACACTTGCGTGC+AGG | + | chr2.1:26220011-26220030 | MS.gene56599:intron | 65.0% | |
| TTGGTGAGGTCCGTGCCTGC+AGG | - | chr2.1:26220423-26220442 | None:intergenic | 65.0% | |
| ! | CGGGCGGGTTCGGACGGATT+CGG | - | chr2.1:26217943-26217962 | None:intergenic | 70.0% |
| ! | GGGCGGGTTCGGACGGATTC+GGG | - | chr2.1:26217942-26217961 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 26217793 | 26220704 | 26217793 | ID=MS.gene56599 |
| chr2.1 | mRNA | 26217793 | 26220704 | 26217793 | ID=MS.gene56599.t1;Parent=MS.gene56599 |
| chr2.1 | exon | 26217793 | 26217814 | 26217793 | ID=MS.gene56599.t1.exon1;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26217793 | 26217814 | 26217793 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| chr2.1 | exon | 26218319 | 26218446 | 26218319 | ID=MS.gene56599.t1.exon2;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26218319 | 26218446 | 26218319 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| chr2.1 | exon | 26218911 | 26219038 | 26218911 | ID=MS.gene56599.t1.exon3;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26218911 | 26219038 | 26218911 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| chr2.1 | exon | 26219175 | 26219278 | 26219175 | ID=MS.gene56599.t1.exon4;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26219175 | 26219278 | 26219175 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| chr2.1 | exon | 26219727 | 26219854 | 26219727 | ID=MS.gene56599.t1.exon5;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26219727 | 26219854 | 26219727 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| chr2.1 | exon | 26220156 | 26220704 | 26220156 | ID=MS.gene56599.t1.exon6;Parent=MS.gene56599.t1 |
| chr2.1 | CDS | 26220156 | 26220704 | 26220156 | ID=cds.MS.gene56599.t1;Parent=MS.gene56599.t1 |
| Gene Sequence |
| Protein sequence |
