Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066263.t1 | RHN81739.1 | 96.2 | 286 | 8 | 1 | 1 | 286 | 21 | 303 | 2.80E-145 | 524.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066263.t1 | G7IDX3 | 96.2 | 286 | 8 | 1 | 1 | 286 | 1 | 283 | 2.0e-145 | 524.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene066263 | 0.896382 | 3.89E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene066263 | 0.854467 | 1.21E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene066263 | 0.859212 | 4.84E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene066263 | 0.89295 | 9.89E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene066263 | 0.861128 | 1.27E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene066263 | 0.898634 | 4.38E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene066263 | 0.884111 | 2.53E-71 | -1.69E-46 |
| MS.gene04939 | MS.gene066263 | 0.858717 | 6.80E-63 | -1.69E-46 |
| MS.gene049427 | MS.gene066263 | 0.808238 | 3.42E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene066263 | 0.834725 | 2.54E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene066263 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene066263 | 0.92515 | 2.71E-90 | -1.69E-46 |
| MS.gene049634 | MS.gene066263 | -0.809072 | 2.27E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene066263 | 0.819389 | 1.19E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene066263 | 0.829617 | 4.66E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene066263 | 0.828595 | 8.24E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene066263 | 0.886214 | 4.15E-72 | -1.69E-46 |
| MS.gene050165 | MS.gene066263 | 0.896659 | 2.98E-76 | -1.69E-46 |
| MS.gene050170 | MS.gene066263 | 0.843667 | 1.22E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene066263 | 0.869568 | 2.81E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene066263 | 0.89656 | 3.28E-76 | -1.69E-46 |
| MS.gene050338 | MS.gene066263 | -0.818719 | 1.69E-52 | -1.69E-46 |
| MS.gene050403 | MS.gene066263 | 0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene066263 | 0.887434 | 1.43E-72 | -1.69E-46 |
| MS.gene050496 | MS.gene066263 | 0.847517 | 1.10E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene066263 | 0.887877 | 9.69E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene066263 | 0.897169 | 1.82E-76 | -1.69E-46 |
| MS.gene050538 | MS.gene066263 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene066263 | 0.869247 | 3.57E-66 | -1.69E-46 |
| MS.gene050593 | MS.gene066263 | 0.825124 | 5.56E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene066263 | 0.91266 | 1.51E-83 | -1.69E-46 |
| MS.gene050675 | MS.gene066263 | 0.897914 | 8.85E-77 | -1.69E-46 |
| MS.gene050699 | MS.gene066263 | 0.877848 | 4.52E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene066263 | 0.84739 | 1.19E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene066263 | 0.861636 | 8.93E-64 | -1.69E-46 |
| MS.gene05079 | MS.gene066263 | -0.808987 | 2.36E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene066263 | 0.890014 | 1.44E-73 | -1.69E-46 |
| MS.gene05081 | MS.gene066263 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene066263 | 0.878582 | 2.50E-69 | -1.69E-46 |
| MS.gene050871 | MS.gene066263 | 0.874559 | 6.14E-68 | -1.69E-46 |
| MS.gene050876 | MS.gene066263 | 0.842431 | 2.60E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene066263 | 0.894075 | 3.47E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene066263 | 0.849024 | 4.22E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene066263 | 0.900299 | 8.42E-78 | -1.69E-46 |
| MS.gene05100 | MS.gene066263 | 0.81054 | 1.10E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene066263 | -0.838599 | 2.61E-57 | -1.69E-46 |
| MS.gene051228 | MS.gene066263 | 0.856804 | 2.51E-62 | -1.69E-46 |
| MS.gene051268 | MS.gene066263 | 0.838162 | 3.39E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene066263 | 0.905849 | 2.78E-80 | -1.69E-46 |
| MS.gene051551 | MS.gene066263 | 0.827052 | 1.94E-54 | -1.69E-46 |
| MS.gene051617 | MS.gene066263 | 0.855869 | 4.72E-62 | -1.69E-46 |
| MS.gene051651 | MS.gene066263 | -0.841211 | 5.45E-58 | -1.69E-46 |
| MS.gene051734 | MS.gene066263 | 0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene066263 | 0.875095 | 4.04E-68 | -1.69E-46 |
| MS.gene051838 | MS.gene066263 | 0.838693 | 2.47E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene066263 | 0.812474 | 4.16E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene066263 | 0.813529 | 2.44E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene066263 | 0.850419 | 1.72E-60 | -1.69E-46 |
| MS.gene052129 | MS.gene066263 | -0.835335 | 1.78E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene066263 | 0.838034 | 3.65E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene066263 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene066263 | 0.848249 | 6.91E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene066263 | 0.845613 | 3.64E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene066263 | 0.855519 | 5.98E-62 | -1.69E-46 |
| MS.gene052503 | MS.gene066263 | 0.825384 | 4.83E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene066263 | 0.816089 | 6.62E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene066263 | 0.836841 | 7.39E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene066263 | 0.828887 | 7.00E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene066263 | 0.818033 | 2.42E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene066263 | 0.816982 | 4.18E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene066263 | 0.871052 | 9.16E-67 | -1.69E-46 |
| MS.gene052872 | MS.gene066263 | 0.8818 | 1.78E-70 | -1.69E-46 |
| MS.gene052916 | MS.gene066263 | 0.804843 | 1.78E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene066263 | 0.888384 | 6.19E-73 | -1.69E-46 |
| MS.gene053104 | MS.gene066263 | 0.811705 | 6.13E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene066263 | 0.867459 | 1.35E-65 | -1.69E-46 |
| MS.gene053207 | MS.gene066263 | 0.83451 | 2.88E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene066263 | 0.847223 | 1.32E-59 | -1.69E-46 |
| MS.gene053284 | MS.gene066263 | 0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene053285 | MS.gene066263 | 0.811404 | 7.12E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene066263 | 0.84763 | 1.02E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene066263 | -0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene066263 | 0.852712 | 3.86E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene066263 | 0.819485 | 1.13E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene066263 | 0.845945 | 2.96E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene066263 | 0.834638 | 2.67E-56 | -1.69E-46 |
| MS.gene053633 | MS.gene066263 | 0.81103 | 8.58E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene066263 | 0.854095 | 1.55E-61 | -1.69E-46 |
| MS.gene053912 | MS.gene066263 | 0.801009 | 1.10E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene066263 | 0.817201 | 3.73E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene066263 | 0.813328 | 2.71E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene066263 | 0.854814 | 9.58E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene066263 | 0.87509 | 4.05E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene066263 | 0.880607 | 4.78E-70 | -1.69E-46 |
| MS.gene05470 | MS.gene066263 | 0.86935 | 3.31E-66 | -1.69E-46 |
| MS.gene054884 | MS.gene066263 | -0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene066263 | 0.894312 | 2.78E-75 | -1.69E-46 |
| MS.gene055154 | MS.gene066263 | -0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene066263 | 0.842951 | 1.89E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene066263 | 0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene066263 | 0.870994 | 9.58E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene066263 | 0.894398 | 2.56E-75 | -1.69E-46 |
| MS.gene055577 | MS.gene066263 | 0.876082 | 1.85E-68 | -1.69E-46 |
| MS.gene055634 | MS.gene066263 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene066263 | 0.845329 | 4.35E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene066263 | 0.840392 | 8.94E-58 | -1.69E-46 |
| MS.gene055647 | MS.gene066263 | 0.831515 | 1.60E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene066263 | 0.837797 | 4.20E-57 | -1.69E-46 |
| MS.gene055748 | MS.gene066263 | 0.907832 | 3.31E-81 | -1.69E-46 |
| MS.gene055750 | MS.gene066263 | 0.877707 | 5.06E-69 | -1.69E-46 |
| MS.gene055751 | MS.gene066263 | 0.912708 | 1.43E-83 | -1.69E-46 |
| MS.gene055776 | MS.gene066263 | 0.859077 | 5.31E-63 | -1.69E-46 |
| MS.gene055849 | MS.gene066263 | 0.815837 | 7.53E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene066263 | 0.89094 | 6.25E-74 | -1.69E-46 |
| MS.gene055941 | MS.gene066263 | 0.868269 | 7.40E-66 | -1.69E-46 |
| MS.gene056083 | MS.gene066263 | 0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene056283 | MS.gene066263 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene066263 | 0.825808 | 3.83E-54 | -1.69E-46 |
| MS.gene056387 | MS.gene066263 | 0.819443 | 1.16E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene066263 | 0.809953 | 1.47E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene066263 | 0.880897 | 3.76E-70 | -1.69E-46 |
| MS.gene056510 | MS.gene066263 | 0.907454 | 4.98E-81 | -1.69E-46 |
| MS.gene056549 | MS.gene066263 | 0.852932 | 3.34E-61 | -1.69E-46 |
| MS.gene056618 | MS.gene066263 | -0.803914 | 2.78E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene066263 | 0.887636 | 1.20E-72 | -1.69E-46 |
| MS.gene056678 | MS.gene066263 | -0.801624 | 8.25E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene066263 | 0.876917 | 9.53E-69 | -1.69E-46 |
| MS.gene056694 | MS.gene066263 | -0.803692 | 3.09E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene066263 | -0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene056857 | MS.gene066263 | -0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene066263 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene066263 | 0.832257 | 1.05E-55 | -1.69E-46 |
| MS.gene056903 | MS.gene066263 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene066263 | 0.847809 | 9.14E-60 | -1.69E-46 |
| MS.gene057086 | MS.gene066263 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene057246 | MS.gene066263 | 0.82588 | 3.68E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene066263 | 0.845174 | 4.79E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene066263 | 0.81227 | 4.61E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene066263 | 0.844948 | 5.51E-59 | -1.69E-46 |
| MS.gene05753 | MS.gene066263 | 0.820602 | 6.29E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene066263 | 0.831798 | 1.36E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene066263 | 0.804541 | 2.06E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene066263 | 0.893523 | 5.81E-75 | -1.69E-46 |
| MS.gene057857 | MS.gene066263 | 0.81981 | 9.55E-53 | -1.69E-46 |
| MS.gene057872 | MS.gene066263 | 0.810572 | 1.08E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene066263 | 0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene066263 | 0.803113 | 4.07E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene066263 | -0.854171 | 1.47E-61 | -1.69E-46 |
| MS.gene058335 | MS.gene066263 | 0.827524 | 1.49E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene066263 | 0.830236 | 3.29E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene066263 | 0.853191 | 2.81E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene066263 | 0.887966 | 8.97E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene066263 | 0.865689 | 4.92E-65 | -1.69E-46 |
| MS.gene058603 | MS.gene066263 | -0.807804 | 4.23E-50 | -1.69E-46 |
| MS.gene058719 | MS.gene066263 | 0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene066263 | 0.830447 | 2.92E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene066263 | 0.898272 | 6.24E-77 | -1.69E-46 |
| MS.gene058838 | MS.gene066263 | 0.855264 | 7.09E-62 | -1.69E-46 |
| MS.gene05883 | MS.gene066263 | 0.807954 | 3.93E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene066263 | 0.882655 | 8.68E-71 | -1.69E-46 |
| MS.gene059023 | MS.gene066263 | 0.890292 | 1.12E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene066263 | 0.844854 | 5.84E-59 | -1.69E-46 |
| MS.gene059079 | MS.gene066263 | 0.881058 | 3.29E-70 | -1.69E-46 |
| MS.gene05912 | MS.gene066263 | 0.852164 | 5.53E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene066263 | 0.833288 | 5.81E-56 | -1.69E-46 |
| MS.gene05914 | MS.gene066263 | 0.829714 | 4.41E-55 | -1.69E-46 |
| MS.gene059181 | MS.gene066263 | 0.853406 | 2.44E-61 | -1.69E-46 |
| MS.gene059305 | MS.gene066263 | 0.831396 | 1.71E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene066263 | 0.827966 | 1.17E-54 | -1.69E-46 |
| MS.gene059526 | MS.gene066263 | -0.835173 | 1.96E-56 | -1.69E-46 |
| MS.gene059667 | MS.gene066263 | 0.817869 | 2.64E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene066263 | 0.892823 | 1.11E-74 | -1.69E-46 |
| MS.gene059699 | MS.gene066263 | -0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene066263 | -0.803272 | 3.77E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene066263 | 0.873471 | 1.43E-67 | -1.69E-46 |
| MS.gene059756 | MS.gene066263 | 0.852132 | 5.64E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene066263 | 0.827788 | 1.29E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene066263 | 0.898848 | 3.55E-77 | -1.69E-46 |
| MS.gene059902 | MS.gene066263 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene066263 | 0.808632 | 2.82E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene066263 | 0.855165 | 7.58E-62 | -1.69E-46 |
| MS.gene060295 | MS.gene066263 | 0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene066263 | 0.860132 | 2.56E-63 | -1.69E-46 |
| MS.gene060728 | MS.gene066263 | 0.81041 | 1.17E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene066263 | 0.915349 | 6.54E-85 | -1.69E-46 |
| MS.gene060778 | MS.gene066263 | 0.823713 | 1.19E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene066263 | 0.865794 | 4.56E-65 | -1.69E-46 |
| MS.gene060818 | MS.gene066263 | 0.819797 | 9.62E-53 | -1.69E-46 |
| MS.gene060823 | MS.gene066263 | -0.83701 | 6.69E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene066263 | 0.816766 | 4.67E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene066263 | 0.842743 | 2.15E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene066263 | 0.811441 | 6.99E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene066263 | 0.901896 | 1.68E-78 | -1.69E-46 |
| MS.gene061044 | MS.gene066263 | -0.846571 | 2.00E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene066263 | 0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene066263 | 0.874048 | 9.15E-68 | -1.69E-46 |
| MS.gene061231 | MS.gene066263 | 0.811027 | 8.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066263.t1 | MTR_1g099520 | 96.154 | 286 | 8 | 1 | 1 | 286 | 1 | 283 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066263.t1 | AT1G28140 | 72.177 | 248 | 62 | 2 | 43 | 283 | 31 | 278 | 1.06e-118 | 342 |
Find 79 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTTTATAACGGCGTTTA+TGG | 0.193049 | 1.1:-71689168 | MS.gene066263:CDS |
| AGCGCACTCTGCAAGCATTA+TGG | 0.246210 | 1.1:-71688286 | MS.gene066263:CDS |
| TTATGGGGCCTCGGGGTTCT+TGG | 0.285137 | 1.1:-71688269 | MS.gene066263:CDS |
| GAAAGCCTTGATTGAGAAAC+TGG | 0.308650 | 1.1:-71687118 | MS.gene066263:CDS |
| AACTTACTTTGCTTGCGTTA+TGG | 0.311852 | 1.1:-71687338 | MS.gene066263:CDS |
| CGTCATTGGGTCAGGTGGGT+TGG | 0.319339 | 1.1:-71688351 | MS.gene066263:CDS |
| ATTATTCCCATTCTTCTTCT+CGG | 0.334508 | 1.1:-71687960 | MS.gene066263:CDS |
| TCATAAGTAATTTACCTTGA+TGG | 0.335092 | 1.1:+71687272 | None:intergenic |
| GTCATTGGGTCAGGTGGGTT+GGG | 0.353231 | 1.1:-71688350 | MS.gene066263:CDS |
| AAATTTGCAGTCCGGTTTGA+TGG | 0.360898 | 1.1:-71687373 | MS.gene066263:intron |
| ACTTAGGTCACCGGGCAAAT+AGG | 0.361128 | 1.1:+71688406 | None:intergenic |
| CATTCTTCTTCTCGGACATC+TGG | 0.369276 | 1.1:-71687952 | MS.gene066263:intron |
| CGCCGTTATAAACTTGTTGT+TGG | 0.370560 | 1.1:+71689175 | None:intergenic |
| GCGCACTCTGCAAGCATTAT+GGG | 0.374010 | 1.1:-71688285 | MS.gene066263:CDS |
| CCATCAGCTGTCTGGCTTGT+CGG | 0.381851 | 1.1:-71688176 | MS.gene066263:CDS |
| CAAGTTTATGTCTTGGCGGT+CGG | 0.386160 | 1.1:-71689254 | MS.gene066263:CDS |
| TGCAAGCATTATGGGGCCTC+GGG | 0.396833 | 1.1:-71688277 | MS.gene066263:CDS |
| CTGCAAGCATTATGGGGCCT+CGG | 0.396844 | 1.1:-71688278 | MS.gene066263:CDS |
| TTGTTCCAGTTTCTCAATCA+AGG | 0.397711 | 1.1:+71687113 | None:intergenic |
| AAGTTTATGTCTTGGCGGTC+GGG | 0.403259 | 1.1:-71689253 | MS.gene066263:CDS |
| CATAAGTAATTTACCTTGAT+GGG | 0.407793 | 1.1:+71687273 | None:intergenic |
| ACCGACCCAATTCTGATTCT+CGG | 0.410553 | 1.1:+71689222 | None:intergenic |
| CTACATCACCCTTGCCCAAC+CGG | 0.413007 | 1.1:-71688234 | MS.gene066263:CDS |
| ATCTTCGGCTTCAACGGTCC+AGG | 0.413922 | 1.1:+71689143 | None:intergenic |
| CCTTCTTCAAGTTTATGTCT+TGG | 0.419897 | 1.1:-71689261 | MS.gene066263:CDS |
| TACTTTGCTTGCGTTATGGA+TGG | 0.419907 | 1.1:-71687334 | MS.gene066263:CDS |
| CCTTCTCCGAGAATCAGAAT+TGG | 0.420118 | 1.1:-71689228 | MS.gene066263:CDS |
| TTGATAACCCATCAGCTGTC+TGG | 0.422836 | 1.1:-71688184 | MS.gene066263:CDS |
| GAGTACCTCTTTGACATCTT+CGG | 0.430335 | 1.1:+71689128 | None:intergenic |
| AATTCGAACAAGATTAGAAA+TGG | 0.436512 | 1.1:+71689284 | None:intergenic |
| GGGCTGAGTGAATTTCCTTC+CGG | 0.442279 | 1.1:+71687293 | None:intergenic |
| GAGAGATTTGAACGTGAAAA+CGG | 0.450871 | 1.1:+71687155 | None:intergenic |
| AGTTCCGTCGTCCATCAAAC+CGG | 0.455453 | 1.1:+71687362 | None:intergenic |
| ATAACGGCGTTTATGGCCCC+TGG | 0.459012 | 1.1:-71689161 | MS.gene066263:CDS |
| GCATCTGCCGCCTATTTGCC+CGG | 0.459649 | 1.1:-71688416 | MS.gene066263:CDS |
| CAGATGTCCGAGAAGAAGAA+TGG | 0.465446 | 1.1:+71687953 | None:intergenic |
| CAGGTTATATCGTACCGATC+AGG | 0.483142 | 1.1:-71688473 | MS.gene066263:CDS |
| TTTGACATCTTCGGCTTCAA+CGG | 0.489022 | 1.1:+71689137 | None:intergenic |
| TCTTCAAGTTTATGTCTTGG+CGG | 0.493287 | 1.1:-71689258 | MS.gene066263:CDS |
| TGCTACGGCAAGCTAGAAGC+TGG | 0.499071 | 1.1:-71687996 | MS.gene066263:CDS |
| CTTCTCCGAGAATCAGAATT+GGG | 0.500907 | 1.1:-71689227 | MS.gene066263:CDS |
| ACTTTGCTTGCGTTATGGAT+GGG | 0.501479 | 1.1:-71687333 | MS.gene066263:CDS |
| TCTTCGGCTTCAACGGTCCA+GGG | 0.516093 | 1.1:+71689144 | None:intergenic |
| TTTGCTTGAGCGTATCACTT+AGG | 0.523274 | 1.1:+71688390 | None:intergenic |
| CCGACAAGCCAGACAGCTGA+TGG | 0.523521 | 1.1:+71688176 | None:intergenic |
| ATCAGAAATATGGCGTTACA+AGG | 0.523943 | 1.1:-71689351 | None:intergenic |
| AGATGTCCGAGAAGAAGAAT+GGG | 0.525851 | 1.1:+71687954 | None:intergenic |
| GAGCGTATCACTTAGGTCAC+CGG | 0.527425 | 1.1:+71688397 | None:intergenic |
| AACCAACAACAAGTTTATAA+CGG | 0.529478 | 1.1:-71689177 | MS.gene066263:CDS |
| TGGCGGTTTCAATATCTGTA+AGG | 0.539090 | 1.1:-71689311 | MS.gene066263:CDS |
| TTTACGTCATTGGGTCAGGT+GGG | 0.540791 | 1.1:-71688355 | MS.gene066263:CDS |
| CGGTTGGGCAAGGGTGATGT+AGG | 0.542884 | 1.1:+71688235 | None:intergenic |
| TTTATTAGCCGGTTGGGCAA+GGG | 0.546853 | 1.1:+71688226 | None:intergenic |
| TCGGTACGGTGTAAAGCGGC+GGG | 0.552551 | 1.1:-71689204 | MS.gene066263:CDS |
| CAATTCTGATTCTCGGAGAA+GGG | 0.554524 | 1.1:+71689229 | None:intergenic |
| CCAAGACATAAACTTGAAGA+AGG | 0.556172 | 1.1:+71689261 | None:intergenic |
| CCAATTCTGATTCTCGGAGA+AGG | 0.562090 | 1.1:+71689228 | None:intergenic |
| GTCGGTACGGTGTAAAGCGG+CGG | 0.563056 | 1.1:-71689205 | MS.gene066263:CDS |
| TATATCGTACCGATCAGGAT+TGG | 0.575057 | 1.1:-71688468 | MS.gene066263:CDS |
| GAAATTCACTCAGCCCATCA+AGG | 0.577695 | 1.1:-71687286 | MS.gene066263:intron |
| CGCACTCTGCAAGCATTATG+GGG | 0.582516 | 1.1:-71688284 | MS.gene066263:CDS |
| AGCGTATCACTTAGGTCACC+GGG | 0.582838 | 1.1:+71688398 | None:intergenic |
| CGAACAAGATTAGAAATGGA+AGG | 0.595756 | 1.1:+71689288 | None:intergenic |
| CTTGAAACAGGACTCTGCTA+CGG | 0.605674 | 1.1:-71688011 | MS.gene066263:intron |
| GAATCAGAATTGGGTCGGTA+CGG | 0.606759 | 1.1:-71689218 | MS.gene066263:CDS |
| AGGATTAAGTACTGTTTCTG+TGG | 0.608660 | 1.1:-71689331 | MS.gene066263:CDS |
| TCCGAGAATCAGAATTGGGT+CGG | 0.617946 | 1.1:-71689223 | MS.gene066263:CDS |
| TTTAATATCAAGGATGACAT+CGG | 0.623685 | 1.1:-71687186 | MS.gene066263:intron |
| ATTAAGTACTGTTTCTGTGG+CGG | 0.624479 | 1.1:-71689328 | MS.gene066263:CDS |
| ATCAGGATTGGTAACAGCTG+CGG | 0.633244 | 1.1:-71688456 | MS.gene066263:CDS |
| CGACAAGCCAGACAGCTGAT+GGG | 0.633627 | 1.1:+71688177 | None:intergenic |
| TAGGTCACCGGGCAAATAGG+CGG | 0.635330 | 1.1:+71688409 | None:intergenic |
| CTTCGGCTTCAACGGTCCAG+GGG | 0.636756 | 1.1:+71689145 | None:intergenic |
| CAGCTGTTACCAATCCTGAT+CGG | 0.643027 | 1.1:+71688459 | None:intergenic |
| CAGTCCGGTTTGATGGACGA+CGG | 0.644994 | 1.1:-71687366 | MS.gene066263:CDS |
| TGAAGCCGAAGATGTCAAAG+AGG | 0.661714 | 1.1:-71689133 | MS.gene066263:intron |
| TGGGTCGGTACGGTGTAAAG+CGG | 0.668122 | 1.1:-71689208 | MS.gene066263:CDS |
| GCAAGCATTATGGGGCCTCG+GGG | 0.704748 | 1.1:-71688276 | MS.gene066263:CDS |
| CAGCTGATCCAAGAACCCCG+AGG | 0.791341 | 1.1:+71688261 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTATTGAATTAATATTAAA+TGG | + | chr1.1:71688364-71688383 | None:intergenic | 10.0% |
| !! | AAAAATATAAATATGACCAA+TGG | + | chr1.1:71687676-71687695 | None:intergenic | 15.0% |
| !! | AAAATATAAATATGACCAAT+GGG | + | chr1.1:71687675-71687694 | None:intergenic | 15.0% |
| !! | AATATTAATTCAATAGAGAA+GGG | - | chr1.1:71688367-71688386 | MS.gene066263:CDS | 15.0% |
| !! | AATTAATTATTGACAACTTT+AGG | - | chr1.1:71687594-71687613 | MS.gene066263:intron | 15.0% |
| !! | AGAAAAAGATATTATACAAA+TGG | + | chr1.1:71689035-71689054 | None:intergenic | 15.0% |
| !! | ATGGTAAAAATAAAAATAGA+TGG | + | chr1.1:71688345-71688364 | None:intergenic | 15.0% |
| !! | TAATATTAATTCAATAGAGA+AGG | - | chr1.1:71688366-71688385 | MS.gene066263:CDS | 15.0% |
| !!! | TTATATTTTTAAGAGACATT+TGG | - | chr1.1:71687686-71687705 | MS.gene066263:intron | 15.0% |
| !!! | TTTTTCTTTTCAATTAGTTA+AGG | - | chr1.1:71688595-71688614 | MS.gene066263:intron | 15.0% |
| !! | AATATACCTGATTCAAAATT+TGG | - | chr1.1:71687722-71687741 | MS.gene066263:intron | 20.0% |
| !! | AATTATCAAAATCATGAGAA+TGG | - | chr1.1:71688649-71688668 | MS.gene066263:intron | 20.0% |
| !! | CATCAAAAGAAATATGATAA+CGG | + | chr1.1:71688876-71688895 | None:intergenic | 20.0% |
| !!! | AAATTGTTATTACTCCATAA+GGG | + | chr1.1:71687525-71687544 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTTTTACGTCAT+TGG | - | chr1.1:71688072-71688091 | MS.gene066263:intron | 20.0% |
| !!! | TGTATTAAAGTTTTATTAGC+CGG | + | chr1.1:71688225-71688244 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTTTACGTCATT+GGG | - | chr1.1:71688073-71688092 | MS.gene066263:intron | 20.0% |
| ! | AACCAACAACAAGTTTATAA+CGG | - | chr1.1:71687260-71687279 | MS.gene066263:intron | 25.0% |
| ! | AACTGAATTTAGAAAACAGA+AGG | + | chr1.1:71687427-71687446 | None:intergenic | 25.0% |
| ! | AATTCGAACAAGATTAGAAA+TGG | + | chr1.1:71687156-71687175 | None:intergenic | 25.0% |
| ! | ACAATAATTTAAGAGTCAAG+AGG | + | chr1.1:71688934-71688953 | None:intergenic | 25.0% |
| ! | ATGGCTACCTTAAATTAAAT+AGG | + | chr1.1:71688554-71688573 | None:intergenic | 25.0% |
| ! | CATAAGTAATTTACCTTGAT+GGG | + | chr1.1:71689167-71689186 | None:intergenic | 25.0% |
| ! | CTTAAGTGTCTCTTAAAAAT+AGG | - | chr1.1:71687768-71687787 | MS.gene066263:intron | 25.0% |
| ! | CTTATAACAGAAATTGATTG+AGG | + | chr1.1:71687342-71687361 | None:intergenic | 25.0% |
| ! | TAAACACAAATCCAATATCA+GGG | + | chr1.1:71689235-71689254 | None:intergenic | 25.0% |
| ! | TATTATACAAATGGACCAAT+CGG | + | chr1.1:71689026-71689045 | None:intergenic | 25.0% |
| ! | TCATAAGTAATTTACCTTGA+TGG | + | chr1.1:71689168-71689187 | None:intergenic | 25.0% |
| ! | TGGATTTGTGTTTAATATCA+AGG | - | chr1.1:71689241-71689260 | MS.gene066263:CDS | 25.0% |
| ! | TTAAACACAAATCCAATATC+AGG | + | chr1.1:71689236-71689255 | None:intergenic | 25.0% |
| ! | TTTAATATCAAGGATGACAT+CGG | - | chr1.1:71689251-71689270 | MS.gene066263:CDS | 25.0% |
| !! | CAAATTGTTATTACTCCATA+AGG | + | chr1.1:71687526-71687545 | None:intergenic | 25.0% |
| !! | CATGTTGCCTATTTAATTTA+AGG | - | chr1.1:71688544-71688563 | MS.gene066263:intron | 25.0% |
| !! | TTTTCAATTAGTTAAGGAGT+TGG | - | chr1.1:71688601-71688620 | MS.gene066263:intron | 25.0% |
| !!! | TTTTTTCGATGAAGATCTAA+TGG | - | chr1.1:71688676-71688695 | MS.gene066263:intron | 25.0% |
| AACAAGAACCATATATGCTA+TGG | + | chr1.1:71688573-71688592 | None:intergenic | 30.0% | |
| ATACTAACTAACACGTGATA+AGG | + | chr1.1:71687372-71687391 | None:intergenic | 30.0% | |
| ATAGTTAGCATTGCATACAT+AGG | + | chr1.1:71687936-71687955 | None:intergenic | 30.0% | |
| ATTATTCCCATTCTTCTTCT+CGG | - | chr1.1:71688477-71688496 | MS.gene066263:intron | 30.0% | |
| CTATTATTTATTTGAGTCCG+TGG | - | chr1.1:71688896-71688915 | MS.gene066263:intron | 30.0% | |
| GGGAAAAGGAATTACAATAA+TGG | + | chr1.1:71687505-71687524 | None:intergenic | 30.0% | |
| GTGTCTCTTAAAAATAGGAT+CGG | - | chr1.1:71687773-71687792 | MS.gene066263:intron | 30.0% | |
| TAGTTAGCATTGCATACATA+GGG | + | chr1.1:71687935-71687954 | None:intergenic | 30.0% | |
| TCATCTTGTATTCTTGAAAC+AGG | - | chr1.1:71688414-71688433 | MS.gene066263:CDS | 30.0% | |
| TCTTAAAAATAGGATCGGAT+CGG | - | chr1.1:71687778-71687797 | MS.gene066263:intron | 30.0% | |
| TTATTACTCCATAAGGGAAA+AGG | + | chr1.1:71687519-71687538 | None:intergenic | 30.0% | |
| ! | ACGTGTTAGTTAGTATTGAA+AGG | - | chr1.1:71687376-71687395 | MS.gene066263:intron | 30.0% |
| ! | TGTTTAATAGAGCACTTTAG+AGG | + | chr1.1:71688526-71688545 | None:intergenic | 30.0% |
| ! | TTGTAATTCCTTTTCCCTTA+TGG | - | chr1.1:71687508-71687527 | MS.gene066263:intron | 30.0% |
| !! | ATGATAACGGTTATCAATTC+AGG | + | chr1.1:71688863-71688882 | None:intergenic | 30.0% |
| !! | TGATAACGGTTATCAATTCA+GGG | + | chr1.1:71688862-71688881 | None:intergenic | 30.0% |
| !! | TTACTCTAAAATTTGCAGTC+CGG | - | chr1.1:71689056-71689075 | MS.gene066263:intron | 30.0% |
| !!! | TAAAGTTTTATTAGCCGGTT+GGG | + | chr1.1:71688220-71688239 | None:intergenic | 30.0% |
| !!! | TTAAAGTTTTATTAGCCGGT+TGG | + | chr1.1:71688221-71688240 | None:intergenic | 30.0% |
| AACATATCCAACAACCTAGT+GGG | - | chr1.1:71688759-71688778 | MS.gene066263:intron | 35.0% | |
| AACTTACTTTGCTTGCGTTA+TGG | - | chr1.1:71689099-71689118 | MS.gene066263:intron | 35.0% | |
| AATATCAGGGAATTTATGCG+GGG | + | chr1.1:71689222-71689241 | None:intergenic | 35.0% | |
| ACAGAAATTGATTGAGGAGA+AGG | + | chr1.1:71687336-71687355 | None:intergenic | 35.0% | |
| ATAAGTGCAATCATGATAGG+AGG | + | chr1.1:71688832-71688851 | None:intergenic | 35.0% | |
| CAAGTTTATAACGGCGTTTA+TGG | - | chr1.1:71687269-71687288 | MS.gene066263:intron | 35.0% | |
| CAATATCAGGGAATTTATGC+GGG | + | chr1.1:71689223-71689242 | None:intergenic | 35.0% | |
| CCAAGACATAAACTTGAAGA+AGG | + | chr1.1:71687179-71687198 | None:intergenic | 35.0% | |
| CCAATATCAGGGAATTTATG+CGG | + | chr1.1:71689224-71689243 | None:intergenic | 35.0% | |
| CGAACAAGATTAGAAATGGA+AGG | + | chr1.1:71687152-71687171 | None:intergenic | 35.0% | |
| GAGAGATTTGAACGTGAAAA+CGG | + | chr1.1:71689285-71689304 | None:intergenic | 35.0% | |
| GAGATAAGTGCAATCATGAT+AGG | + | chr1.1:71688835-71688854 | None:intergenic | 35.0% | |
| TAAATATGACCAATGGGAGT+AGG | + | chr1.1:71687669-71687688 | None:intergenic | 35.0% | |
| TAAGGTAGCCATAGCATATA+TGG | - | chr1.1:71688562-71688581 | MS.gene066263:intron | 35.0% | |
| TTATTGTCACCAATACCGAT+TGG | - | chr1.1:71689008-71689027 | MS.gene066263:intron | 35.0% | |
| TTGTTCCAGTTTCTCAATCA+AGG | + | chr1.1:71689327-71689346 | None:intergenic | 35.0% | |
| ! | AGTTGCAGCTTAAAAGCTTT+TGG | - | chr1.1:71687905-71687924 | MS.gene066263:intron | 35.0% |
| ! | CCTTCTTCAAGTTTATGTCT+TGG | - | chr1.1:71687176-71687195 | MS.gene066263:CDS | 35.0% |
| ! | CTTTTAAGCTGCAACTGTAT+AGG | + | chr1.1:71687901-71687920 | None:intergenic | 35.0% |
| ! | GGTCTTTTTGTGATATTTGC+CGG | - | chr1.1:71689125-71689144 | MS.gene066263:intron | 35.0% |
| ! | TCTGGTCCAAATTTTGAATC+AGG | + | chr1.1:71687731-71687750 | None:intergenic | 35.0% |
| ! | TCTTCAAGTTTATGTCTTGG+CGG | - | chr1.1:71687179-71687198 | MS.gene066263:intron | 35.0% |
| ! | TTTTTGTGATATTTGCCGGA+AGG | - | chr1.1:71689129-71689148 | MS.gene066263:intron | 35.0% |
| !! | AGGATTAAGTACTGTTTCTG+TGG | - | chr1.1:71687106-71687125 | MS.gene066263:CDS | 35.0% |
| !! | ATTAAGTACTGTTTCTGTGG+CGG | - | chr1.1:71687109-71687128 | MS.gene066263:CDS | 35.0% |
| !! | GTCACAAAAGTTGATGTATC+TGG | + | chr1.1:71687749-71687768 | None:intergenic | 35.0% |
| !! | TTTGACAGGACTTGTTTTCA+AGG | - | chr1.1:71688299-71688318 | MS.gene066263:CDS | 35.0% |
| !!! | TTTTTTTACGTCATTGGGTC+AGG | - | chr1.1:71688078-71688097 | MS.gene066263:intron | 35.0% |
| ACAAATGGACCAATCGGTAT+TGG | + | chr1.1:71689020-71689039 | None:intergenic | 40.0% | |
| ACATATCCAACAACCTAGTG+GGG | - | chr1.1:71688760-71688779 | MS.gene066263:intron | 40.0% | |
| ACTTTGCTTGCGTTATGGAT+GGG | - | chr1.1:71689104-71689123 | MS.gene066263:intron | 40.0% | |
| AGATGTCCGAGAAGAAGAAT+GGG | + | chr1.1:71688486-71688505 | None:intergenic | 40.0% | |
| AGGTTGTTGGATATGTTGCA+GGG | + | chr1.1:71688756-71688775 | None:intergenic | 40.0% | |
| ATCCACACTCACTTCTTGAT+CGG | + | chr1.1:71688986-71689005 | None:intergenic | 40.0% | |
| CAACATATCCAACAACCTAG+TGG | - | chr1.1:71688758-71688777 | MS.gene066263:intron | 40.0% | |
| CAATTCTGATTCTCGGAGAA+GGG | + | chr1.1:71687211-71687230 | None:intergenic | 40.0% | |
| CCGCATAAATTCCCTGATAT+TGG | - | chr1.1:71689221-71689240 | MS.gene066263:CDS | 40.0% | |
| CTTCTCCGAGAATCAGAATT+GGG | - | chr1.1:71687210-71687229 | MS.gene066263:intron | 40.0% | |
| GAAAGCCTTGATTGAGAAAC+TGG | - | chr1.1:71689319-71689338 | MS.gene066263:CDS | 40.0% | |
| GAGTACCTCTTTGACATCTT+CGG | + | chr1.1:71687312-71687331 | None:intergenic | 40.0% | |
| TACTTTGCTTGCGTTATGGA+TGG | - | chr1.1:71689103-71689122 | MS.gene066263:intron | 40.0% | |
| TAGGTTGTTGGATATGTTGC+AGG | + | chr1.1:71688757-71688776 | None:intergenic | 40.0% | |
| TCAACTATACCTACTCCCAT+TGG | - | chr1.1:71687657-71687676 | MS.gene066263:intron | 40.0% | |
| TGCAGGGCTAGAAAGAATTT+GGG | + | chr1.1:71688740-71688759 | None:intergenic | 40.0% | |
| TGGCGGTTTCAATATCTGTA+AGG | - | chr1.1:71687126-71687145 | MS.gene066263:CDS | 40.0% | |
| TTGCAGGGCTAGAAAGAATT+TGG | + | chr1.1:71688741-71688760 | None:intergenic | 40.0% | |
| TTTAAGAGTCAAGAGGACGA+TGG | + | chr1.1:71688927-71688946 | None:intergenic | 40.0% | |
| TTTGACATCTTCGGCTTCAA+CGG | + | chr1.1:71687303-71687322 | None:intergenic | 40.0% | |
| TTTGCTTGAGCGTATCACTT+AGG | + | chr1.1:71688050-71688069 | None:intergenic | 40.0% | |
| ! | AAATTTGCAGTCCGGTTTGA+TGG | - | chr1.1:71689064-71689083 | MS.gene066263:intron | 40.0% |
| ! | AGGCTTTCTTTTCGTCATCA+CGG | + | chr1.1:71689307-71689326 | None:intergenic | 40.0% |
| ! | GCTAGAAAGAATTTGGGTTC+TGG | + | chr1.1:71688734-71688753 | None:intergenic | 40.0% |
| ! | TATATCGTACCGATCAGGAT+TGG | - | chr1.1:71687969-71687988 | MS.gene066263:CDS | 40.0% |
| !! | ACAGGACTTGTTTTCAAGGA+AGG | - | chr1.1:71688303-71688322 | MS.gene066263:CDS | 40.0% |
| !! | CGCCGTTATAAACTTGTTGT+TGG | + | chr1.1:71687265-71687284 | None:intergenic | 40.0% |
| AAGTTTATGTCTTGGCGGTC+GGG | - | chr1.1:71687184-71687203 | MS.gene066263:intron | 45.0% | |
| ACACACTACACTGTGTTTGC+AGG | + | chr1.1:71687862-71687881 | None:intergenic | 45.0% | |
| ACCGACCCAATTCTGATTCT+CGG | + | chr1.1:71687218-71687237 | None:intergenic | 45.0% | |
| ACTCACTTCTTGATCGGTGA+AGG | + | chr1.1:71688980-71688999 | None:intergenic | 45.0% | |
| AGAGGACGATGGAAAATCCA+CGG | + | chr1.1:71688916-71688935 | None:intergenic | 45.0% | |
| AGCCTGACTCTACTCGAATT+GGG | + | chr1.1:71687555-71687574 | None:intergenic | 45.0% | |
| CAAGTTTATGTCTTGGCGGT+CGG | - | chr1.1:71687183-71687202 | MS.gene066263:intron | 45.0% | |
| CACACTACACTGTGTTTGCA+GGG | + | chr1.1:71687861-71687880 | None:intergenic | 45.0% | |
| CAGATGTCCGAGAAGAAGAA+TGG | + | chr1.1:71688487-71688506 | None:intergenic | 45.0% | |
| CAGCTGTTACCAATCCTGAT+CGG | + | chr1.1:71687981-71688000 | None:intergenic | 45.0% | |
| CATTCTTCTTCTCGGACATC+TGG | - | chr1.1:71688485-71688504 | MS.gene066263:intron | 45.0% | |
| CCAATTCTGATTCTCGGAGA+AGG | + | chr1.1:71687212-71687231 | None:intergenic | 45.0% | |
| CCTGTCAAAGCAGCAAAAAG+AGG | + | chr1.1:71688288-71688307 | None:intergenic | 45.0% | |
| CCTTCTCCGAGAATCAGAAT+TGG | - | chr1.1:71687209-71687228 | MS.gene066263:intron | 45.0% | |
| CGGTGAAGGTAAACGAAATG+CGG | + | chr1.1:71688966-71688985 | None:intergenic | 45.0% | |
| CTTGAAACAGGACTCTGCTA+CGG | - | chr1.1:71688426-71688445 | MS.gene066263:CDS | 45.0% | |
| GAAATTCACTCAGCCCATCA+AGG | - | chr1.1:71689151-71689170 | MS.gene066263:CDS | 45.0% | |
| GAATCAGAATTGGGTCGGTA+CGG | - | chr1.1:71687219-71687238 | MS.gene066263:intron | 45.0% | |
| GGAGGCTGTTACTAGCAATA+AGG | + | chr1.1:71688814-71688833 | None:intergenic | 45.0% | |
| GGTACGATATAACCTGCCAT+GGG | + | chr1.1:71687960-71687979 | None:intergenic | 45.0% | |
| TAGCCTGACTCTACTCGAAT+TGG | + | chr1.1:71687556-71687575 | None:intergenic | 45.0% | |
| TCCGAGAATCAGAATTGGGT+CGG | - | chr1.1:71687214-71687233 | MS.gene066263:intron | 45.0% | |
| TGAAGCCGAAGATGTCAAAG+AGG | - | chr1.1:71687304-71687323 | MS.gene066263:CDS | 45.0% | |
| TGCAATGCTAACTATGCCCA+TGG | - | chr1.1:71687941-71687960 | MS.gene066263:intron | 45.0% | |
| TTTACGTCATTGGGTCAGGT+GGG | - | chr1.1:71688082-71688101 | MS.gene066263:intron | 45.0% | |
| TTTATTAGCCGGTTGGGCAA+GGG | + | chr1.1:71688214-71688233 | None:intergenic | 45.0% | |
| ! | ATCAGGATTGGTAACAGCTG+CGG | - | chr1.1:71687981-71688000 | MS.gene066263:CDS | 45.0% |
| ! | CAGGTTATATCGTACCGATC+AGG | - | chr1.1:71687964-71687983 | MS.gene066263:CDS | 45.0% |
| ! | TTGATAACCCATCAGCTGTC+TGG | - | chr1.1:71688253-71688272 | MS.gene066263:CDS | 45.0% |
| ! | TTTTACGTCATTGGGTCAGG+TGG | - | chr1.1:71688081-71688100 | MS.gene066263:intron | 45.0% |
| ! | TTTTATTAGCCGGTTGGGCA+AGG | + | chr1.1:71688215-71688234 | None:intergenic | 45.0% |
| !!! | CCTCTTTTTGCTGCTTTGAC+AGG | - | chr1.1:71688285-71688304 | MS.gene066263:CDS | 45.0% |
| ACTTAGGTCACCGGGCAAAT+AGG | + | chr1.1:71688034-71688053 | None:intergenic | 50.0% | |
| AGCGCACTCTGCAAGCATTA+TGG | - | chr1.1:71688151-71688170 | MS.gene066263:CDS | 50.0% | |
| AGCGTATCACTTAGGTCACC+GGG | + | chr1.1:71688042-71688061 | None:intergenic | 50.0% | |
| AGTTCCGTCGTCCATCAAAC+CGG | + | chr1.1:71689078-71689097 | None:intergenic | 50.0% | |
| ATGCTAACTATGCCCATGGC+AGG | - | chr1.1:71687945-71687964 | MS.gene066263:intron | 50.0% | |
| CACCGATCAAGAAGTGAGTG+TGG | - | chr1.1:71688981-71689000 | MS.gene066263:intron | 50.0% | |
| CGCACTCTGCAAGCATTATG+GGG | - | chr1.1:71688153-71688172 | MS.gene066263:CDS | 50.0% | |
| CGGTACGATATAACCTGCCA+TGG | + | chr1.1:71687961-71687980 | None:intergenic | 50.0% | |
| GACCCAATTCGAGTAGAGTC+AGG | - | chr1.1:71687550-71687569 | MS.gene066263:intron | 50.0% | |
| GAGCGTATCACTTAGGTCAC+CGG | + | chr1.1:71688043-71688062 | None:intergenic | 50.0% | |
| GCGCACTCTGCAAGCATTAT+GGG | - | chr1.1:71688152-71688171 | MS.gene066263:CDS | 50.0% | |
| GGGCTGAGTGAATTTCCTTC+CGG | + | chr1.1:71689147-71689166 | None:intergenic | 50.0% | |
| TATCCAACAACCTAGTGGGG+TGG | - | chr1.1:71688763-71688782 | MS.gene066263:intron | 50.0% | |
| ATAACGGCGTTTATGGCCCC+TGG | - | chr1.1:71687276-71687295 | MS.gene066263:intron | 55.0% | |
| ATCTTCGGCTTCAACGGTCC+AGG | + | chr1.1:71687297-71687316 | None:intergenic | 55.0% | |
| CGACAAGCCAGACAGCTGAT+GGG | + | chr1.1:71688263-71688282 | None:intergenic | 55.0% | |
| CTACATCACCCTTGCCCAAC+CGG | - | chr1.1:71688203-71688222 | MS.gene066263:CDS | 55.0% | |
| CTGCAAGCATTATGGGGCCT+CGG | - | chr1.1:71688159-71688178 | MS.gene066263:CDS | 55.0% | |
| TAGGTCACCGGGCAAATAGG+CGG | + | chr1.1:71688031-71688050 | None:intergenic | 55.0% | |
| TCATCTGCAGCCCTGCAGAT+TGG | + | chr1.1:71688790-71688809 | None:intergenic | 55.0% | |
| TCTTCGGCTTCAACGGTCCA+GGG | + | chr1.1:71687296-71687315 | None:intergenic | 55.0% | |
| TGCAAGCATTATGGGGCCTC+GGG | - | chr1.1:71688160-71688179 | MS.gene066263:CDS | 55.0% | |
| TGCTACGGCAAGCTAGAAGC+TGG | - | chr1.1:71688441-71688460 | MS.gene066263:CDS | 55.0% | |
| TGGGTCGGTACGGTGTAAAG+CGG | - | chr1.1:71687229-71687248 | MS.gene066263:intron | 55.0% | |
| ! | CAGTCCGGTTTGATGGACGA+CGG | - | chr1.1:71689071-71689090 | MS.gene066263:intron | 55.0% |
| ! | CCATCAGCTGTCTGGCTTGT+CGG | - | chr1.1:71688261-71688280 | MS.gene066263:CDS | 55.0% |
| ! | GTCATTGGGTCAGGTGGGTT+GGG | - | chr1.1:71688087-71688106 | MS.gene066263:intron | 55.0% |
| AGTGGGGTGGACCAATCTGC+AGG | - | chr1.1:71688776-71688795 | MS.gene066263:intron | 60.0% | |
| CAGCTGATCCAAGAACCCCG+AGG | + | chr1.1:71688179-71688198 | None:intergenic | 60.0% | |
| CCGACAAGCCAGACAGCTGA+TGG | + | chr1.1:71688264-71688283 | None:intergenic | 60.0% | |
| CGGTTGGGCAAGGGTGATGT+AGG | + | chr1.1:71688205-71688224 | None:intergenic | 60.0% | |
| CGTCATTGGGTCAGGTGGGT+TGG | - | chr1.1:71688086-71688105 | MS.gene066263:intron | 60.0% | |
| CTTCGGCTTCAACGGTCCAG+GGG | + | chr1.1:71687295-71687314 | None:intergenic | 60.0% | |
| GCAAGCATTATGGGGCCTCG+GGG | - | chr1.1:71688161-71688180 | MS.gene066263:CDS | 60.0% | |
| GCATCTGCCGCCTATTTGCC+CGG | - | chr1.1:71688021-71688040 | MS.gene066263:intron | 60.0% | |
| GGTCCACCCCACTAGGTTGT+TGG | + | chr1.1:71688769-71688788 | None:intergenic | 60.0% | |
| GTCGGTACGGTGTAAAGCGG+CGG | - | chr1.1:71687232-71687251 | MS.gene066263:intron | 60.0% | |
| GTGGGGTGGACCAATCTGCA+GGG | - | chr1.1:71688777-71688796 | MS.gene066263:intron | 60.0% | |
| TCGGTACGGTGTAAAGCGGC+GGG | - | chr1.1:71687233-71687252 | MS.gene066263:intron | 60.0% | |
| TTATGGGGCCTCGGGGTTCT+TGG | - | chr1.1:71688168-71688187 | MS.gene066263:CDS | 60.0% | |
| ! | GCAGATTGGTCCACCCCACT+AGG | + | chr1.1:71688776-71688795 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71687095 | 71689364 | 71687095 | ID=MS.gene066263 |
| chr1.1 | mRNA | 71687095 | 71689364 | 71687095 | ID=MS.gene066263.t1;Parent=MS.gene066263 |
| chr1.1 | exon | 71689134 | 71689364 | 71689134 | ID=MS.gene066263.t1.exon1;Parent=MS.gene066263.t1 |
| chr1.1 | CDS | 71689134 | 71689364 | 71689134 | ID=cds.MS.gene066263.t1;Parent=MS.gene066263.t1 |
| chr1.1 | exon | 71688135 | 71688492 | 71688135 | ID=MS.gene066263.t1.exon2;Parent=MS.gene066263.t1 |
| chr1.1 | CDS | 71688135 | 71688492 | 71688135 | ID=cds.MS.gene066263.t1;Parent=MS.gene066263.t1 |
| chr1.1 | exon | 71687953 | 71688023 | 71687953 | ID=MS.gene066263.t1.exon3;Parent=MS.gene066263.t1 |
| chr1.1 | CDS | 71687953 | 71688023 | 71687953 | ID=cds.MS.gene066263.t1;Parent=MS.gene066263.t1 |
| chr1.1 | exon | 71687287 | 71687385 | 71687287 | ID=MS.gene066263.t1.exon4;Parent=MS.gene066263.t1 |
| chr1.1 | CDS | 71687287 | 71687385 | 71687287 | ID=cds.MS.gene066263.t1;Parent=MS.gene066263.t1 |
| chr1.1 | exon | 71687095 | 71687196 | 71687095 | ID=MS.gene066263.t1.exon5;Parent=MS.gene066263.t1 |
| chr1.1 | CDS | 71687095 | 71687196 | 71687095 | ID=cds.MS.gene066263.t1;Parent=MS.gene066263.t1 |
| Gene Sequence |
| Protein sequence |
