Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71078.t1 | RHN51072.1 | 93 | 270 | 19 | 0 | 1 | 270 | 42 | 311 | 3.00E-128 | 468 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71078.t1 | Q55C17 | 33.9 | 189 | 119 | 4 | 86 | 269 | 112 | 299 | 3.3e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71078.t1 | G7KJ00 | 93.0 | 270 | 19 | 0 | 1 | 270 | 1 | 270 | 2.1e-128 | 468.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene71078 | 0.832895 | 7.28E-56 | -1.69E-46 |
| MS.gene049173 | MS.gene71078 | 0.819735 | 9.93E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene71078 | 0.867183 | 1.65E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene71078 | 0.85672 | 2.66E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene71078 | 0.86148 | 9.96E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene71078 | 0.872863 | 2.29E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene71078 | 0.862319 | 5.51E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene71078 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene71078 | 0.82703 | 1.96E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene71078 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene71078 | 0.857609 | 1.45E-62 | -1.69E-46 |
| MS.gene049805 | MS.gene71078 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene71078 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene71078 | 0.828652 | 7.98E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene71078 | 0.832337 | 1.00E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene71078 | 0.807586 | 4.70E-50 | -1.69E-46 |
| MS.gene050216 | MS.gene71078 | 0.846934 | 1.59E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene71078 | 0.868861 | 4.76E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene71078 | 0.838614 | 2.59E-57 | -1.69E-46 |
| MS.gene050381 | MS.gene71078 | -0.808655 | 2.78E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene71078 | 0.824486 | 7.86E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene71078 | 0.835257 | 1.86E-56 | -1.69E-46 |
| MS.gene050499 | MS.gene71078 | 0.824167 | 9.35E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene71078 | 0.855668 | 5.40E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene71078 | 0.85114 | 1.08E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene71078 | 0.80472 | 1.89E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene71078 | 0.854388 | 1.27E-61 | -1.69E-46 |
| MS.gene050662 | MS.gene71078 | 0.839321 | 1.70E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene71078 | 0.842196 | 3.00E-58 | -1.69E-46 |
| MS.gene050686 | MS.gene71078 | 0.815052 | 1.13E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene71078 | 0.817118 | 3.89E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene71078 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene71078 | 0.873539 | 1.36E-67 | -1.69E-46 |
| MS.gene050809 | MS.gene71078 | -0.808518 | 2.98E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene71078 | 0.850486 | 1.65E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene71078 | 0.867705 | 1.12E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene71078 | 0.868118 | 8.28E-66 | -1.69E-46 |
| MS.gene050876 | MS.gene71078 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene71078 | 0.821249 | 4.46E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene71078 | 0.828791 | 7.39E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene71078 | 0.818438 | 1.96E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene71078 | 0.827506 | 1.51E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene71078 | 0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene71078 | 0.822297 | 2.55E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene71078 | 0.816573 | 5.16E-52 | -1.69E-46 |
| MS.gene051734 | MS.gene71078 | 0.81374 | 2.20E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene71078 | 0.87029 | 1.63E-66 | -1.69E-46 |
| MS.gene051838 | MS.gene71078 | 0.807966 | 3.90E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene71078 | 0.862316 | 5.52E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene71078 | 0.836714 | 7.96E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene71078 | 0.825195 | 5.35E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene71078 | 0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene71078 | 0.826917 | 2.09E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene71078 | 0.836159 | 1.10E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene71078 | 0.815452 | 9.18E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene71078 | 0.820924 | 5.30E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene71078 | 0.820353 | 7.17E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene71078 | 0.845168 | 4.81E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene71078 | 0.837863 | 4.04E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene71078 | 0.867882 | 9.86E-66 | -1.69E-46 |
| MS.gene052872 | MS.gene71078 | 0.876531 | 1.30E-68 | -1.69E-46 |
| MS.gene052916 | MS.gene71078 | 0.848055 | 7.82E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene71078 | 0.822865 | 1.88E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene71078 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene71078 | 0.815619 | 8.42E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene71078 | 0.822571 | 2.21E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene71078 | 0.811647 | 6.31E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene71078 | 0.812403 | 4.31E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene71078 | 0.837186 | 6.03E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene71078 | 0.835149 | 1.98E-56 | -1.69E-46 |
| MS.gene053420 | MS.gene71078 | -0.830432 | 2.95E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene71078 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene71078 | 0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene71078 | -0.828576 | 8.33E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene71078 | 0.864374 | 1.27E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene71078 | 0.827056 | 1.93E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene71078 | 0.826593 | 2.49E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene71078 | 0.869072 | 4.07E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene71078 | 0.843954 | 1.02E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene71078 | 0.828988 | 6.62E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene71078 | 0.809367 | 1.96E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene71078 | 0.815771 | 7.79E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene71078 | 0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene71078 | 0.870906 | 1.02E-66 | -1.69E-46 |
| MS.gene05494 | MS.gene71078 | 0.857235 | 1.87E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene71078 | 0.863709 | 2.05E-64 | -1.69E-46 |
| MS.gene05505 | MS.gene71078 | 0.84039 | 8.95E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene71078 | -0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene71078 | 0.82708 | 1.91E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene71078 | 0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene71078 | 0.833948 | 3.98E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene71078 | 0.832166 | 1.10E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene71078 | 0.86913 | 3.90E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene71078 | 0.862252 | 5.78E-64 | -1.69E-46 |
| MS.gene055636 | MS.gene71078 | 0.832314 | 1.01E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene71078 | 0.833288 | 5.81E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene71078 | 0.871511 | 6.47E-67 | -1.69E-46 |
| MS.gene055748 | MS.gene71078 | 0.808281 | 3.35E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene71078 | 0.836601 | 8.51E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene71078 | 0.824268 | 8.85E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene71078 | 0.814539 | 1.46E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene71078 | 0.827047 | 1.94E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene71078 | 0.835117 | 2.02E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene71078 | 0.846376 | 2.26E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene71078 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene71078 | 0.822612 | 2.16E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene71078 | 0.818557 | 1.84E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene71078 | 0.817665 | 2.93E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene71078 | 0.831426 | 1.68E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene71078 | 0.80332 | 3.69E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene71078 | 0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene71078 | 0.854762 | 9.92E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene71078 | 0.865022 | 7.98E-65 | -1.69E-46 |
| MS.gene056549 | MS.gene71078 | 0.835434 | 1.68E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene71078 | 0.876074 | 1.86E-68 | -1.69E-46 |
| MS.gene056692 | MS.gene71078 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene056856 | MS.gene71078 | -0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene056857 | MS.gene71078 | -0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene71078 | 0.833794 | 4.35E-56 | -1.69E-46 |
| MS.gene056947 | MS.gene71078 | 0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene71078 | 0.858827 | 6.31E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene71078 | 0.818679 | 1.73E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene71078 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene71078 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene71078 | 0.811694 | 6.16E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene71078 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene71078 | 0.845499 | 3.91E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene71078 | 0.855484 | 6.12E-62 | -1.69E-46 |
| MS.gene058157 | MS.gene71078 | 0.801945 | 7.09E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene71078 | 0.832052 | 1.18E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene71078 | 0.833342 | 5.64E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene71078 | 0.864056 | 1.60E-64 | -1.69E-46 |
| MS.gene058544 | MS.gene71078 | 0.800743 | 1.25E-48 | -1.69E-46 |
| MS.gene058588 | MS.gene71078 | 0.801686 | 8.01E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene71078 | 0.854138 | 1.50E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene71078 | 0.861861 | 7.62E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene71078 | 0.800627 | 1.32E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene71078 | -0.814612 | 1.41E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene71078 | -0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene71078 | 0.860258 | 2.34E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene71078 | 0.848597 | 5.54E-60 | -1.69E-46 |
| MS.gene059029 | MS.gene71078 | 0.834309 | 3.23E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene71078 | 0.8762 | 1.69E-68 | -1.69E-46 |
| MS.gene059305 | MS.gene71078 | 0.839882 | 1.21E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene71078 | 0.83555 | 1.57E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene71078 | 0.835504 | 1.62E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene71078 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene71078 | 0.802715 | 4.92E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene71078 | 0.852473 | 4.51E-61 | -1.69E-46 |
| MS.gene059699 | MS.gene71078 | -0.841056 | 5.99E-58 | -1.69E-46 |
| MS.gene059701 | MS.gene71078 | -0.811658 | 6.27E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene71078 | -0.842464 | 2.55E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene71078 | 0.807517 | 4.86E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene71078 | 0.851284 | 9.81E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene71078 | 0.881792 | 1.79E-70 | -1.69E-46 |
| MS.gene059902 | MS.gene71078 | 0.856459 | 3.17E-62 | -1.69E-46 |
| MS.gene060482 | MS.gene71078 | 0.859829 | 3.15E-63 | -1.69E-46 |
| MS.gene060703 | MS.gene71078 | 0.865631 | 5.13E-65 | -1.69E-46 |
| MS.gene060762 | MS.gene71078 | 0.860883 | 1.51E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene71078 | 0.833844 | 4.22E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene71078 | 0.829001 | 6.57E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene71078 | 0.832816 | 7.62E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene71078 | 0.842079 | 3.22E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene71078 | 0.814687 | 1.36E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene71078 | 0.831971 | 1.23E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene71078 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene71078 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene71078 | 0.848164 | 7.29E-60 | -1.69E-46 |
| MS.gene061041 | MS.gene71078 | 0.822766 | 1.99E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene71078 | 0.841186 | 5.53E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene71078 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene71078 | 0.806933 | 6.47E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71078.t1 | MTR_6g043740 | 94.815 | 270 | 14 | 0 | 1 | 270 | 1 | 270 | 1.44e-180 | 497 |
| MS.gene71078.t1 | MTR_6g037340 | 74.074 | 270 | 68 | 1 | 1 | 270 | 1 | 268 | 1.59e-150 | 421 |
| MS.gene71078.t1 | MTR_6g037330 | 64.655 | 116 | 39 | 1 | 1 | 116 | 1 | 114 | 2.55e-50 | 162 |
| MS.gene71078.t1 | MTR_6g037370 | 60.204 | 98 | 37 | 1 | 22 | 119 | 1 | 96 | 3.34e-36 | 125 |
| MS.gene71078.t1 | MTR_7g066760 | 42.991 | 107 | 59 | 2 | 165 | 270 | 160 | 265 | 2.33e-19 | 85.5 |
| MS.gene71078.t1 | MTR_4g064025 | 41.573 | 89 | 50 | 2 | 183 | 270 | 174 | 261 | 2.63e-14 | 71.2 |
| MS.gene71078.t1 | MTR_5g087590 | 29.825 | 171 | 111 | 4 | 107 | 269 | 141 | 310 | 1.45e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71078.t1 | AT5G16010 | 59.470 | 264 | 105 | 2 | 8 | 270 | 6 | 268 | 4.78e-116 | 334 |
| MS.gene71078.t1 | AT2G38050 | 32.710 | 107 | 71 | 1 | 165 | 270 | 156 | 262 | 1.40e-14 | 72.0 |
| MS.gene71078.t1 | AT3G55360 | 32.164 | 171 | 107 | 5 | 107 | 269 | 141 | 310 | 7.10e-14 | 70.9 |
| MS.gene71078.t1 | AT2G16530 | 26.512 | 215 | 116 | 6 | 95 | 270 | 132 | 343 | 8.22e-11 | 62.0 |
| MS.gene71078.t1 | AT2G16530 | 26.512 | 215 | 116 | 6 | 95 | 270 | 132 | 343 | 8.22e-11 | 62.0 |
| MS.gene71078.t1 | AT2G16530 | 26.512 | 215 | 116 | 6 | 95 | 270 | 131 | 342 | 8.26e-11 | 62.0 |
Find 49 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTTACGTTCCAGAATT+TGG | 0.133911 | 6.1:+18249985 | None:intergenic |
| ATAATAGCCTTAACATTCTT+AGG | 0.269833 | 6.1:+18247690 | None:intergenic |
| ATATGAACTATTCCAAATTC+TGG | 0.282119 | 6.1:-18249997 | MS.gene71078:CDS |
| TACAAGAAACAATGTGATTC+CGG | 0.321584 | 6.1:+18247974 | None:intergenic |
| TTTAGATCTTTGGTTCTTCA+AGG | 0.346488 | 6.1:-18249839 | MS.gene71078:CDS |
| CCACAAATATAGTGGTTCTA+TGG | 0.348368 | 6.1:-18248111 | MS.gene71078:CDS |
| AGAAAATAACTTAGAGTTAT+GGG | 0.350393 | 6.1:+18248071 | None:intergenic |
| TATCTTCTATCCAAATTAAG+AGG | 0.370538 | 6.1:-18247924 | MS.gene71078:CDS |
| AAATCAAACAAGCCACCTTT+AGG | 0.388800 | 6.1:+18247876 | None:intergenic |
| GAGAAAATAACTTAGAGTTA+TGG | 0.393676 | 6.1:+18248070 | None:intergenic |
| CTATTTGTCCACAAATATAG+TGG | 0.398112 | 6.1:-18248119 | MS.gene71078:CDS |
| GGAATCACATTGTTTCTTGT+AGG | 0.401990 | 6.1:-18247972 | MS.gene71078:CDS |
| ACAAGAAACAATGTGATTCC+GGG | 0.450458 | 6.1:+18247975 | None:intergenic |
| ATGAAATTGTCGAGTAAAAG+TGG | 0.451319 | 6.1:-18249932 | MS.gene71078:CDS |
| GCAGGTATCAATGAAGTTAG+AGG | 0.453941 | 6.1:-18250025 | MS.gene71078:CDS |
| AATAGATCGATTGATGGTTC+TGG | 0.459828 | 6.1:+18248002 | None:intergenic |
| CTATCCAAATTAAGAGGAAA+AGG | 0.465185 | 6.1:-18247918 | MS.gene71078:CDS |
| CATTGATACCTGCGTTTGCA+AGG | 0.469684 | 6.1:+18250035 | None:intergenic |
| TATTCATTCTCTTTCGCCAT+AGG | 0.471133 | 6.1:-18247783 | MS.gene71078:CDS |
| CCATAGAACCACTATATTTG+TGG | 0.471338 | 6.1:+18248111 | None:intergenic |
| GGTTCTTCAAGGTGCTGTTA+CGG | 0.475927 | 6.1:-18249828 | MS.gene71078:CDS |
| TTGTTTCTTGTAGGCATCAC+CGG | 0.480456 | 6.1:-18247963 | MS.gene71078:CDS |
| AAAGATCTAAAACCATCATC+AGG | 0.489846 | 6.1:+18249851 | None:intergenic |
| GGGGTGGGAATAGGAAGTTT+AGG | 0.497094 | 6.1:+18250104 | None:intergenic |
| TTGCATAACTCCTACCCAAA+AGG | 0.506130 | 6.1:+18247748 | None:intergenic |
| GGATACAATAGATCGATTGA+TGG | 0.506607 | 6.1:+18247996 | None:intergenic |
| ATACAATGTCTGAGAAATGA+AGG | 0.506974 | 6.1:+18247803 | None:intergenic |
| CGGTGATGAATAGTGATGGT+GGG | 0.519692 | 6.1:+18250083 | None:intergenic |
| ATTAAGAGGAAAAGGCGAAA+AGG | 0.520680 | 6.1:-18247910 | MS.gene71078:CDS |
| GCAGCACCAGCAACAAAAGC+AGG | 0.536471 | 6.1:+18249890 | None:intergenic |
| GGTGATGAATAGTGATGGTG+GGG | 0.536899 | 6.1:+18250084 | None:intergenic |
| AAGGAATACAAGATTCCTAA+AGG | 0.541853 | 6.1:-18247891 | MS.gene71078:CDS |
| ATAATGATGGTAGAAGTTGC+CGG | 0.544164 | 6.1:+18247944 | None:intergenic |
| ATTTGGATAGAAGATAATGA+TGG | 0.547206 | 6.1:+18247931 | None:intergenic |
| TGGGTAGGAGTTATGCAACT+AGG | 0.551229 | 6.1:-18247743 | MS.gene71078:CDS |
| ATTGATACCTGCGTTTGCAA+GGG | 0.576643 | 6.1:+18250036 | None:intergenic |
| TAGGAACGTGGAGAATGTCA+TGG | 0.587780 | 6.1:+18250123 | None:intergenic |
| TCAATCGATCTATTGTATCC+CGG | 0.587840 | 6.1:-18247993 | MS.gene71078:CDS |
| GGAGTTATGCAACTAGGAGA+TGG | 0.597335 | 6.1:-18247737 | MS.gene71078:CDS |
| CAGGTATCAATGAAGTTAGA+GGG | 0.600530 | 6.1:-18250024 | MS.gene71078:CDS |
| GCGGTGATGAATAGTGATGG+TGG | 0.621221 | 6.1:+18250082 | None:intergenic |
| TGTGTCTCCCTTGCAAACGC+AGG | 0.627026 | 6.1:-18250043 | MS.gene71078:CDS |
| GTGATGAATAGTGATGGTGG+GGG | 0.627804 | 6.1:+18250085 | None:intergenic |
| GAATAGGAAGTTTAGGAACG+TGG | 0.656255 | 6.1:+18250111 | None:intergenic |
| GAATACAAGATTCCTAAAGG+TGG | 0.664789 | 6.1:-18247888 | MS.gene71078:CDS |
| GTTCTGGAAGATTCGATGTG+AGG | 0.693883 | 6.1:+18248018 | None:intergenic |
| GACACATGTTATGACAGACA+TGG | 0.708285 | 6.1:+18250060 | None:intergenic |
| ATGGCGGTGATGAATAGTGA+TGG | 0.709071 | 6.1:+18250079 | None:intergenic |
| ACATGTTATGACAGACATGG+CGG | 0.733861 | 6.1:+18250063 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACACTTTTTTTTTTTTTT+TGG | + | chr6.1:18248410-18248429 | None:intergenic | 10.0% |
| !! | ACATATATATGTTTATAAGT+GGG | + | chr6.1:18248721-18248740 | None:intergenic | 15.0% |
| !! | ATCTTATAAACTTACAAAAT+CGG | - | chr6.1:18248675-18248694 | MS.gene71078:intron | 15.0% |
| !! | TTAAAATTCTGAATAAGATA+AGG | + | chr6.1:18249330-18249349 | None:intergenic | 15.0% |
| !!! | TTTATGATTTTAATTGTTGT+GGG | - | chr6.1:18248082-18248101 | MS.gene71078:CDS | 15.0% |
| !! | AAATCTTTCTCATCAAATTA+GGG | - | chr6.1:18248777-18248796 | MS.gene71078:intron | 20.0% |
| !! | ACAAAATTAAATATAAGCTC+TGG | + | chr6.1:18249361-18249380 | None:intergenic | 20.0% |
| !! | AGAAAATAACTTAGAGTTAT+GGG | + | chr6.1:18249727-18249746 | None:intergenic | 20.0% |
| !! | ATAGTTATGCATTCTATTTA+AGG | + | chr6.1:18248573-18248592 | None:intergenic | 20.0% |
| !! | ATATATATGTTTATAAGTGG+GGG | + | chr6.1:18248719-18248738 | None:intergenic | 20.0% |
| !! | CACATATATATGTTTATAAG+TGG | + | chr6.1:18248722-18248741 | None:intergenic | 20.0% |
| !! | CATATATATGTTTATAAGTG+GGG | + | chr6.1:18248720-18248739 | None:intergenic | 20.0% |
| !! | TAAATCTTTCTCATCAAATT+AGG | - | chr6.1:18248776-18248795 | MS.gene71078:intron | 20.0% |
| !!! | ATGCAAGTATAATTTTAGTT+AGG | - | chr6.1:18249154-18249173 | MS.gene71078:intron | 20.0% |
| !!! | ATTATCTTTTTGAGATCATA+GGG | - | chr6.1:18249956-18249975 | MS.gene71078:CDS | 20.0% |
| !!! | CTTTTTTTTTTTTTTTGGTC+AGG | + | chr6.1:18248405-18248424 | None:intergenic | 20.0% |
| !!! | GTTTATGATTTTAATTGTTG+TGG | - | chr6.1:18248081-18248100 | MS.gene71078:CDS | 20.0% |
| !!! | TTATGTATGCTTTAAAGTTT+AGG | - | chr6.1:18248530-18248549 | MS.gene71078:intron | 20.0% |
| !!! | TTTATTGTGTGTTATTCTTT+TGG | - | chr6.1:18249228-18249247 | MS.gene71078:intron | 20.0% |
| ! | ATATGAACTATTCCAAATTC+TGG | - | chr6.1:18247798-18247817 | MS.gene71078:CDS | 25.0% |
| ! | ATGATCTCAAAAAGATAATG+AGG | + | chr6.1:18249955-18249974 | None:intergenic | 25.0% |
| ! | ATTATTTACGTTCCAGAATT+TGG | + | chr6.1:18247813-18247832 | None:intergenic | 25.0% |
| ! | ATTTGGATAGAAGATAATGA+TGG | + | chr6.1:18249867-18249886 | None:intergenic | 25.0% |
| ! | CTAACTTAACCTTACAAAAT+TGG | - | chr6.1:18248936-18248955 | MS.gene71078:intron | 25.0% |
| ! | GAGAAAATAACTTAGAGTTA+TGG | + | chr6.1:18249728-18249747 | None:intergenic | 25.0% |
| ! | TATCTTCTATCCAAATTAAG+AGG | - | chr6.1:18249871-18249890 | MS.gene71078:CDS | 25.0% |
| ! | TATGATACAATCGTAGAATT+TGG | - | chr6.1:18248906-18248925 | MS.gene71078:intron | 25.0% |
| ! | TGATGTCCACTTATTAAAAT+GGG | + | chr6.1:18248466-18248485 | None:intergenic | 25.0% |
| ! | TTAAAGCATACATAAGTATG+TGG | + | chr6.1:18248525-18248544 | None:intergenic | 25.0% |
| !! | ATAATAGCCTTAACATTCTT+AGG | + | chr6.1:18250108-18250127 | None:intergenic | 25.0% |
| !! | CAATTTTGTAAGGTTAAGTT+AGG | + | chr6.1:18248938-18248957 | None:intergenic | 25.0% |
| !! | GATTTTCACAATCCAAATTA+TGG | + | chr6.1:18249088-18249107 | None:intergenic | 25.0% |
| !! | TGATTTTCCTAAGAATGTTA+AGG | - | chr6.1:18250098-18250117 | MS.gene71078:CDS | 25.0% |
| !!! | CATTATCTTTTTGAGATCAT+AGG | - | chr6.1:18249955-18249974 | MS.gene71078:CDS | 25.0% |
| !!! | TTTCTTTAAGAGAGTTTTTG+AGG | - | chr6.1:18247994-18248013 | MS.gene71078:CDS | 25.0% |
| AACTATGTCTCTCTAATTGT+TGG | - | chr6.1:18248587-18248606 | MS.gene71078:intron | 30.0% | |
| AAGGAATACAAGATTCCTAA+AGG | - | chr6.1:18249904-18249923 | MS.gene71078:CDS | 30.0% | |
| ACCTTATAAGGTGAATAAGT+GGG | + | chr6.1:18248343-18248362 | None:intergenic | 30.0% | |
| ACTTACAAAATCGGTATGTA+AGG | - | chr6.1:18248684-18248703 | MS.gene71078:intron | 30.0% | |
| ATACAATGTCTGAGAAATGA+AGG | + | chr6.1:18249995-18250014 | None:intergenic | 30.0% | |
| ATCTCACATCATTAAACCAT+AGG | + | chr6.1:18248030-18248049 | None:intergenic | 30.0% | |
| ATGAAATTGTCGAGTAAAAG+TGG | - | chr6.1:18247863-18247882 | MS.gene71078:CDS | 30.0% | |
| CACTCAATATACACAAAATC+TGG | + | chr6.1:18249579-18249598 | None:intergenic | 30.0% | |
| CTATCCAAATTAAGAGGAAA+AGG | - | chr6.1:18249877-18249896 | MS.gene71078:CDS | 30.0% | |
| CTATTTGTCCACAAATATAG+TGG | - | chr6.1:18249676-18249695 | MS.gene71078:intron | 30.0% | |
| GTACAAACCTACAATTAATG+CGG | - | chr6.1:18249053-18249072 | MS.gene71078:intron | 30.0% | |
| GTGATGTCCACTTATTAAAA+TGG | + | chr6.1:18248467-18248486 | None:intergenic | 30.0% | |
| TACAAGAAACAATGTGATTC+CGG | + | chr6.1:18249824-18249843 | None:intergenic | 30.0% | |
| TACCTACATTAGAAGAGATA+TGG | + | chr6.1:18249002-18249021 | None:intergenic | 30.0% | |
| TGGTTAGAATTCACCTTATA+AGG | + | chr6.1:18248355-18248374 | None:intergenic | 30.0% | |
| TTAAATTAAGAGTCTCACGT+TGG | + | chr6.1:18248759-18248778 | None:intergenic | 30.0% | |
| TTATACACAACCGAAATAGT+GGG | + | chr6.1:18248498-18248517 | None:intergenic | 30.0% | |
| TTGAGGTAATGTATAACCTA+TGG | - | chr6.1:18248011-18248030 | MS.gene71078:CDS | 30.0% | |
| TTTGTTCCTAAGTATTTCGT+GGG | - | chr6.1:18249422-18249441 | MS.gene71078:intron | 30.0% | |
| ! | AAAAGTGTATAGCGAAATTC+TGG | - | chr6.1:18248420-18248439 | MS.gene71078:intron | 30.0% |
| ! | AAAGATCTAAAACCATCATC+AGG | + | chr6.1:18247947-18247966 | None:intergenic | 30.0% |
| ! | ACATACAAGCCAATTTTGTA+AGG | + | chr6.1:18248948-18248967 | None:intergenic | 30.0% |
| ! | CTGATACCATGTAAGAATTT+TGG | - | chr6.1:18248643-18248662 | MS.gene71078:intron | 30.0% |
| !! | TATGCTTTAAAGTTTAGGAG+AGG | - | chr6.1:18248535-18248554 | MS.gene71078:intron | 30.0% |
| !! | TTTAGATCTTTGGTTCTTCA+AGG | - | chr6.1:18247956-18247975 | MS.gene71078:CDS | 30.0% |
| !! | TTTGAGATCATAGGGTTTTA+TGG | - | chr6.1:18249964-18249983 | MS.gene71078:CDS | 30.0% |
| !!! | ACCATGTAAGAATTTTGGTT+TGG | - | chr6.1:18248648-18248667 | MS.gene71078:intron | 30.0% |
| !!! | CAGGTAGTTTTTTTTTTGTC+AGG | + | chr6.1:18248386-18248405 | None:intergenic | 30.0% |
| !!! | CCATGTAAGAATTTTGGTTT+GGG | - | chr6.1:18248649-18248668 | MS.gene71078:intron | 30.0% |
| !!! | CTGGTTTGGTTTTAAATTTG+TGG | - | chr6.1:18248439-18248458 | MS.gene71078:intron | 30.0% |
| !!! | TGATGATGGTTTTAGATCTT+TGG | - | chr6.1:18247946-18247965 | MS.gene71078:CDS | 30.0% |
| AAATCAAACAAGCCACCTTT+AGG | + | chr6.1:18249922-18249941 | None:intergenic | 35.0% | |
| AAGGTAAAAAGTAGTGCCTA+TGG | + | chr6.1:18250031-18250050 | None:intergenic | 35.0% | |
| ACAAGAAACAATGTGATTCC+GGG | + | chr6.1:18249823-18249842 | None:intergenic | 35.0% | |
| AGCCATATCTCTTCTAATGT+AGG | - | chr6.1:18248997-18249016 | MS.gene71078:intron | 35.0% | |
| AGTCTCACGTTGGATAAAAA+TGG | + | chr6.1:18248749-18248768 | None:intergenic | 35.0% | |
| ATAATGATGGTAGAAGTTGC+CGG | + | chr6.1:18249854-18249873 | None:intergenic | 35.0% | |
| ATTAAGAGGAAAAGGCGAAA+AGG | - | chr6.1:18249885-18249904 | MS.gene71078:CDS | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | + | chr6.1:18248344-18248363 | None:intergenic | 35.0% | |
| CAGGTATCAATGAAGTTAGA+GGG | - | chr6.1:18247771-18247790 | MS.gene71078:CDS | 35.0% | |
| CATAATCCCACGAAATACTT+AGG | + | chr6.1:18249431-18249450 | None:intergenic | 35.0% | |
| CCATAGAACCACTATATTTG+TGG | + | chr6.1:18249687-18249706 | None:intergenic | 35.0% | |
| CCCAAACCAAAATTCTTACA+TGG | + | chr6.1:18248652-18248671 | None:intergenic | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | + | chr6.1:18248342-18248361 | None:intergenic | 35.0% | |
| GAATACAAGATTCCTAAAGG+TGG | - | chr6.1:18249907-18249926 | MS.gene71078:CDS | 35.0% | |
| GGATACAATAGATCGATTGA+TGG | + | chr6.1:18249802-18249821 | None:intergenic | 35.0% | |
| GTTATACACAACCGAAATAG+TGG | + | chr6.1:18248499-18248518 | None:intergenic | 35.0% | |
| GTTTGTTCCTAAGTATTTCG+TGG | - | chr6.1:18249421-18249440 | MS.gene71078:intron | 35.0% | |
| TAAGGTGAATTCTAACCACT+AGG | - | chr6.1:18248357-18248376 | MS.gene71078:intron | 35.0% | |
| TAATCCACCGCATTAATTGT+AGG | + | chr6.1:18249063-18249082 | None:intergenic | 35.0% | |
| TATCGAATTGTTAAGCCACA+AGG | + | chr6.1:18248183-18248202 | None:intergenic | 35.0% | |
| TATTCATTCTCTTTCGCCAT+AGG | - | chr6.1:18250012-18250031 | MS.gene71078:CDS | 35.0% | |
| TCAACTCAATCCATTGCATT+AGG | + | chr6.1:18249123-18249142 | None:intergenic | 35.0% | |
| TCAATCCATTGCATTAGGTA+TGG | + | chr6.1:18249118-18249137 | None:intergenic | 35.0% | |
| TCAATCGATCTATTGTATCC+CGG | - | chr6.1:18249802-18249821 | MS.gene71078:CDS | 35.0% | |
| TGAAACCATACCTAATGCAA+TGG | - | chr6.1:18249110-18249129 | MS.gene71078:intron | 35.0% | |
| TGCTATTAAGTTTCCGCTAT+CGG | + | chr6.1:18248860-18248879 | None:intergenic | 35.0% | |
| TGTAATCTGTCAAAGTAGCA+AGG | - | chr6.1:18249198-18249217 | MS.gene71078:intron | 35.0% | |
| ! | AATAGATCGATTGATGGTTC+TGG | + | chr6.1:18249796-18249815 | None:intergenic | 35.0% |
| ! | CCACAAATATAGTGGTTCTA+TGG | - | chr6.1:18249684-18249703 | MS.gene71078:intron | 35.0% |
| ! | GGAATCACATTGTTTCTTGT+AGG | - | chr6.1:18249823-18249842 | MS.gene71078:CDS | 35.0% |
| ! | TGTATAGCGAAATTCTGGTT+TGG | - | chr6.1:18248425-18248444 | MS.gene71078:intron | 35.0% |
| ! | TTCGCCTTTTCCTCTTAATT+TGG | + | chr6.1:18249884-18249903 | None:intergenic | 35.0% |
| !! | CAAAATTGGCTTGTATGTTG+AGG | - | chr6.1:18248950-18248969 | MS.gene71078:intron | 35.0% |
| !! | TGTGGACCCATTTTAATAAG+TGG | - | chr6.1:18248457-18248476 | MS.gene71078:intron | 35.0% |
| !!! | AGGCACTACTTTTTACCTTT+TGG | - | chr6.1:18250032-18250051 | MS.gene71078:CDS | 35.0% |
| !!! | CTACTTTTTACCTTTTGGGT+AGG | - | chr6.1:18250037-18250056 | MS.gene71078:CDS | 35.0% |
| !!! | GGCACTACTTTTTACCTTTT+GGG | - | chr6.1:18250033-18250052 | MS.gene71078:CDS | 35.0% |
| !!! | TTTTTGGTGTTTCCTGATGA+TGG | - | chr6.1:18247932-18247951 | MS.gene71078:CDS | 35.0% |
| AAACTCATACACACACCTTG+TGG | - | chr6.1:18248165-18248184 | MS.gene71078:intron | 40.0% | |
| ACATGTTATGACAGACATGG+CGG | + | chr6.1:18247735-18247754 | None:intergenic | 40.0% | |
| AGCGGAAACTTAATAGCAAG+TGG | - | chr6.1:18248862-18248881 | MS.gene71078:intron | 40.0% | |
| AGTAAGCGTGTCCAACAATT+CGG | - | chr6.1:18248618-18248637 | MS.gene71078:intron | 40.0% | |
| ATTGATACCTGCGTTTGCAA+GGG | + | chr6.1:18247762-18247781 | None:intergenic | 40.0% | |
| CAAACCTACAATTAATGCGG+TGG | - | chr6.1:18249056-18249075 | MS.gene71078:intron | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | - | chr6.1:18248339-18248358 | MS.gene71078:intron | 40.0% | |
| CTTAATAGCAAGTGGCCAAA+CGG | - | chr6.1:18248870-18248889 | MS.gene71078:intron | 40.0% | |
| GAATAGGAAGTTTAGGAACG+TGG | + | chr6.1:18247687-18247706 | None:intergenic | 40.0% | |
| GACACATGTTATGACAGACA+TGG | + | chr6.1:18247738-18247757 | None:intergenic | 40.0% | |
| GCAGGTATCAATGAAGTTAG+AGG | - | chr6.1:18247770-18247789 | MS.gene71078:CDS | 40.0% | |
| GCTATTAAGTTTCCGCTATC+GGG | + | chr6.1:18248859-18248878 | None:intergenic | 40.0% | |
| GGGAATTGACATTGTTACGT+AGG | - | chr6.1:18248102-18248121 | MS.gene71078:CDS | 40.0% | |
| GGTGTGTGTATGAGTTTCAA+AGG | + | chr6.1:18248162-18248181 | None:intergenic | 40.0% | |
| GTCCACAAGTTCTACATCAA+CGG | + | chr6.1:18248214-18248233 | None:intergenic | 40.0% | |
| TAACACATAGTCTCGTACCA+AGG | - | chr6.1:18248805-18248824 | MS.gene71078:intron | 40.0% | |
| TAATAAGTGGACATCACTCG+TGG | - | chr6.1:18248470-18248489 | MS.gene71078:intron | 40.0% | |
| TAGGTTTGTACTTACTGCTG+AGG | + | chr6.1:18249044-18249063 | None:intergenic | 40.0% | |
| TTGCATAACTCCTACCCAAA+AGG | + | chr6.1:18250050-18250069 | None:intergenic | 40.0% | |
| ! | ATGTTTCTACTCTACTGCGT+AGG | - | chr6.1:18249651-18249670 | MS.gene71078:intron | 40.0% |
| ! | TTGTTTCTTGTAGGCATCAC+CGG | - | chr6.1:18249832-18249851 | MS.gene71078:CDS | 40.0% |
| !! | CGGTGGATTAGACCATAATT+TGG | - | chr6.1:18249073-18249092 | MS.gene71078:intron | 40.0% |
| !! | TATACTCCTGCTTTTGTTGC+TGG | - | chr6.1:18247899-18247918 | MS.gene71078:CDS | 40.0% |
| !!! | TTTTTTGTCAGGTAGCCTAG+TGG | + | chr6.1:18248375-18248394 | None:intergenic | 40.0% |
| ACTCGTGGATCCCACTATTT+CGG | - | chr6.1:18248485-18248504 | MS.gene71078:intron | 45.0% | |
| ATGGCGGTGATGAATAGTGA+TGG | + | chr6.1:18247719-18247738 | None:intergenic | 45.0% | |
| CATTGATACCTGCGTTTGCA+AGG | + | chr6.1:18247763-18247782 | None:intergenic | 45.0% | |
| CGGTGATGAATAGTGATGGT+GGG | + | chr6.1:18247715-18247734 | None:intergenic | 45.0% | |
| GGAGTTATGCAACTAGGAGA+TGG | - | chr6.1:18250058-18250077 | MS.gene71078:CDS | 45.0% | |
| GTCCGTTGATGTAGAACTTG+TGG | - | chr6.1:18248209-18248228 | MS.gene71078:intron | 45.0% | |
| TACCAACTGAGCTATGCTCA+CGG | + | chr6.1:18248279-18248298 | None:intergenic | 45.0% | |
| TAGCCTATCCAAGATCCGTT+TGG | + | chr6.1:18248888-18248907 | None:intergenic | 45.0% | |
| TGGGTAGGAGTTATGCAACT+AGG | - | chr6.1:18250052-18250071 | MS.gene71078:CDS | 45.0% | |
| TGGTAGGACAATGCAATGCA+GGG | - | chr6.1:18248294-18248313 | MS.gene71078:intron | 45.0% | |
| TGGTATCAGAGCCGAATTGT+TGG | + | chr6.1:18248632-18248651 | None:intergenic | 45.0% | |
| TTGGTAGGACAATGCAATGC+AGG | - | chr6.1:18248293-18248312 | MS.gene71078:intron | 45.0% | |
| ! | GGTGATGAATAGTGATGGTG+GGG | + | chr6.1:18247714-18247733 | None:intergenic | 45.0% |
| !! | GGTTCTTCAAGGTGCTGTTA+CGG | - | chr6.1:18247967-18247986 | MS.gene71078:CDS | 45.0% |
| !! | GTGATGAATAGTGATGGTGG+GGG | + | chr6.1:18247713-18247732 | None:intergenic | 45.0% |
| !! | GTTCTGGAAGATTCGATGTG+AGG | + | chr6.1:18249780-18249799 | None:intergenic | 45.0% |
| ACACTCTGATGTCCAGTCCT+TGG | + | chr6.1:18248825-18248844 | None:intergenic | 50.0% | |
| ACCAACTGAGCTATGCTCAC+GGG | + | chr6.1:18248278-18248297 | None:intergenic | 50.0% | |
| CATAGTCTCGTACCAAGGAC+TGG | - | chr6.1:18248810-18248829 | MS.gene71078:intron | 50.0% | |
| GCGGTGATGAATAGTGATGG+TGG | + | chr6.1:18247716-18247735 | None:intergenic | 50.0% | |
| GGGGTGGGAATAGGAAGTTT+AGG | + | chr6.1:18247694-18247713 | None:intergenic | 50.0% | |
| GGTAGGACAATGCAATGCAG+GGG | - | chr6.1:18248295-18248314 | MS.gene71078:intron | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | - | chr6.1:18248278-18248297 | MS.gene71078:intron | 50.0% | |
| GTTTCCGCTATCGGGTCAAT+CGG | + | chr6.1:18248851-18248870 | None:intergenic | 50.0% | |
| TAACCCGATTGACCCGATAG+CGG | - | chr6.1:18248844-18248863 | MS.gene71078:intron | 50.0% | |
| TGGCCAAACGGATCTTGGAT+AGG | - | chr6.1:18248882-18248901 | MS.gene71078:intron | 50.0% | |
| TTTCCGCTATCGGGTCAATC+GGG | + | chr6.1:18248850-18248869 | None:intergenic | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr6.1:18248335-18248354 | None:intergenic | 50.0% |
| !! | ATGAATAGTGATGGTGGGGG+TGG | + | chr6.1:18247710-18247729 | None:intergenic | 50.0% |
| !! | TGAATAGTGATGGTGGGGGT+GGG | + | chr6.1:18247709-18247728 | None:intergenic | 50.0% |
| GCAAGTGGCCAAACGGATCT+TGG | - | chr6.1:18248877-18248896 | MS.gene71078:intron | 55.0% | |
| GCAGCACCAGCAACAAAAGC+AGG | + | chr6.1:18247908-18247927 | None:intergenic | 55.0% | |
| TCCCGTGAGCATAGCTCAGT+TGG | - | chr6.1:18248274-18248293 | MS.gene71078:intron | 55.0% | |
| TGTGTCTCCCTTGCAAACGC+AGG | - | chr6.1:18247752-18247771 | MS.gene71078:CDS | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr6.1:18248334-18248353 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr6.1:18248333-18248352 | None:intergenic | 55.0% |
| !!! | TGCTGGTGCTGCGTCGTTTT+TGG | - | chr6.1:18247916-18247935 | MS.gene71078:CDS | 55.0% |
| ACAATGCAATGCAGGGGCCG+GGG | - | chr6.1:18248301-18248320 | MS.gene71078:intron | 60.0% | |
| GACAATGCAATGCAGGGGCC+GGG | - | chr6.1:18248300-18248319 | MS.gene71078:intron | 60.0% | |
| GGACAATGCAATGCAGGGGC+CGG | - | chr6.1:18248299-18248318 | MS.gene71078:intron | 60.0% | |
| !! | GTGATGGTGGGGGTGGGAAT+AGG | + | chr6.1:18247703-18247722 | None:intergenic | 60.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr6.1:18248321-18248340 | None:intergenic | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr6.1:18248313-18248332 | MS.gene71078:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 18247674 | 18250143 | 18247674 | ID=MS.gene71078 |
| chr6.1 | mRNA | 18247674 | 18250143 | 18247674 | ID=MS.gene71078.t1;Parent=MS.gene71078 |
| chr6.1 | exon | 18249802 | 18250143 | 18249802 | ID=MS.gene71078.t1.exon1;Parent=MS.gene71078.t1 |
| chr6.1 | CDS | 18249802 | 18250143 | 18249802 | ID=cds.MS.gene71078.t1;Parent=MS.gene71078.t1 |
| chr6.1 | exon | 18247674 | 18248144 | 18247674 | ID=MS.gene71078.t1.exon2;Parent=MS.gene71078.t1 |
| chr6.1 | CDS | 18247674 | 18248144 | 18247674 | ID=cds.MS.gene71078.t1;Parent=MS.gene71078.t1 |
| Gene Sequence |
| Protein sequence |
