Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072773.t1 | XP_003611071.1 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 6.30E-203 | 716.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072773.t1 | Q9MAA2 | 54.5 | 264 | 116 | 3 | 82 | 343 | 9 | 270 | 1.7e-76 | 287.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072773.t1 | G7KC13 | 97.2 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 4.5e-203 | 716.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072773 | 0.848822 | 4.80E-60 | -1.69E-46 |
| MS.gene049171 | MS.gene072773 | 0.822061 | 2.90E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene072773 | 0.812722 | 3.67E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene072773 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene072773 | 0.809855 | 1.54E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene072773 | 0.80644 | 8.22E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene072773 | 0.830485 | 2.86E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene072773 | 0.820153 | 7.97E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene072773 | 0.813534 | 2.44E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene072773 | 0.817961 | 2.51E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene072773 | 0.88106 | 3.28E-70 | -1.69E-46 |
| MS.gene049633 | MS.gene072773 | 0.841854 | 3.69E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene072773 | 0.855007 | 8.42E-62 | -1.69E-46 |
| MS.gene050170 | MS.gene072773 | 0.810879 | 9.26E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene072773 | 0.80326 | 3.79E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene072773 | 0.83387 | 4.16E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene072773 | 0.860209 | 2.42E-63 | -1.69E-46 |
| MS.gene050670 | MS.gene072773 | 0.851401 | 9.09E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene072773 | 0.802174 | 6.36E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene072773 | 0.845454 | 4.02E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene072773 | 0.862708 | 4.19E-64 | -1.69E-46 |
| MS.gene05080 | MS.gene072773 | 0.845263 | 4.53E-59 | -1.69E-46 |
| MS.gene050812 | MS.gene072773 | 0.815744 | 7.90E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene072773 | 0.904518 | 1.13E-79 | -1.69E-46 |
| MS.gene050868 | MS.gene072773 | 0.821995 | 3.00E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene072773 | 0.820152 | 7.98E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene072773 | 0.841978 | 3.42E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene072773 | 0.874391 | 7.00E-68 | -1.69E-46 |
| MS.gene051387 | MS.gene072773 | 0.813919 | 2.01E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene072773 | 0.837175 | 6.07E-57 | -1.69E-46 |
| MS.gene051617 | MS.gene072773 | 0.82706 | 1.93E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene072773 | 0.835051 | 2.10E-56 | -1.69E-46 |
| MS.gene051734 | MS.gene072773 | 0.854649 | 1.07E-61 | -1.69E-46 |
| MS.gene051838 | MS.gene072773 | 0.910906 | 1.11E-82 | -1.69E-46 |
| MS.gene051858 | MS.gene072773 | 0.832391 | 9.71E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene072773 | 0.832803 | 7.68E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene072773 | 0.846152 | 2.60E-59 | -1.69E-46 |
| MS.gene052135 | MS.gene072773 | 0.835329 | 1.79E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene072773 | 0.852583 | 4.20E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene072773 | 0.828213 | 1.02E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene072773 | 0.820055 | 8.39E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene072773 | 0.812312 | 4.52E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene072773 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene072773 | 0.852625 | 4.08E-61 | -1.69E-46 |
| MS.gene052414 | MS.gene072773 | 0.895276 | 1.12E-75 | -1.69E-46 |
| MS.gene052421 | MS.gene072773 | 0.851248 | 1.00E-60 | -1.69E-46 |
| MS.gene052469 | MS.gene072773 | 0.81409 | 1.84E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene072773 | 0.839338 | 1.68E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene072773 | 0.841624 | 4.25E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene072773 | 0.818278 | 2.13E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene072773 | 0.879724 | 9.86E-70 | -1.69E-46 |
| MS.gene052503 | MS.gene072773 | 0.860698 | 1.72E-63 | -1.69E-46 |
| MS.gene052505 | MS.gene072773 | 0.881507 | 2.27E-70 | -1.69E-46 |
| MS.gene052506 | MS.gene072773 | 0.801511 | 8.70E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene072773 | 0.858122 | 1.02E-62 | -1.69E-46 |
| MS.gene052822 | MS.gene072773 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene072773 | 0.852581 | 4.20E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene072773 | 0.853424 | 2.41E-61 | -1.69E-46 |
| MS.gene052870 | MS.gene072773 | 0.853977 | 1.67E-61 | -1.69E-46 |
| MS.gene052872 | MS.gene072773 | 0.855463 | 6.20E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene072773 | 0.826077 | 3.31E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene072773 | 0.858821 | 6.33E-63 | -1.69E-46 |
| MS.gene052999 | MS.gene072773 | 0.816026 | 6.84E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene072773 | 0.819044 | 1.43E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene072773 | 0.813564 | 2.40E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene072773 | 0.869335 | 3.34E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene072773 | 0.825135 | 5.53E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene072773 | 0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene072773 | 0.81713 | 3.87E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene072773 | 0.827251 | 1.73E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene072773 | 0.810507 | 1.11E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene072773 | 0.84584 | 3.16E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene072773 | 0.850857 | 1.29E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene072773 | 0.826378 | 2.80E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene072773 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene072773 | 0.881422 | 2.43E-70 | -1.69E-46 |
| MS.gene053912 | MS.gene072773 | 0.813951 | 1.97E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene072773 | 0.841507 | 4.56E-58 | -1.69E-46 |
| MS.gene054107 | MS.gene072773 | 0.812174 | 4.84E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene072773 | 0.827061 | 1.93E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene072773 | 0.809427 | 1.90E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene072773 | 0.844908 | 5.65E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene072773 | 0.81683 | 4.52E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene072773 | -0.807867 | 4.10E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene072773 | -0.833861 | 4.18E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene072773 | 0.856552 | 2.98E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene072773 | 0.859869 | 3.07E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene072773 | 0.851784 | 7.08E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene072773 | 0.822145 | 2.77E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene072773 | 0.871222 | 8.06E-67 | -1.69E-46 |
| MS.gene055224 | MS.gene072773 | 0.855619 | 5.59E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene072773 | 0.867383 | 1.43E-65 | -1.69E-46 |
| MS.gene055362 | MS.gene072773 | 0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene072773 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene072773 | 0.805439 | 1.33E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene072773 | 0.827445 | 1.56E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene072773 | 0.849017 | 4.24E-60 | -1.69E-46 |
| MS.gene05553 | MS.gene072773 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene072773 | 0.853268 | 2.67E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene072773 | 0.835575 | 1.55E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene072773 | 0.871365 | 7.23E-67 | -1.69E-46 |
| MS.gene055744 | MS.gene072773 | 0.867367 | 1.44E-65 | -1.69E-46 |
| MS.gene05589 | MS.gene072773 | 0.842579 | 2.37E-58 | -1.69E-46 |
| MS.gene055909 | MS.gene072773 | 0.811492 | 6.82E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene072773 | 0.811819 | 5.78E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene072773 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene072773 | 0.852919 | 3.37E-61 | -1.69E-46 |
| MS.gene056166 | MS.gene072773 | 0.840632 | 7.73E-58 | -1.69E-46 |
| MS.gene056387 | MS.gene072773 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene072773 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene072773 | 0.818786 | 1.63E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene072773 | 0.850675 | 1.46E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene072773 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene072773 | 0.805633 | 1.21E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene072773 | 0.817877 | 2.62E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene072773 | 0.856423 | 3.25E-62 | -1.69E-46 |
| MS.gene056897 | MS.gene072773 | 0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene072773 | 0.826767 | 2.26E-54 | -1.69E-46 |
| MS.gene057048 | MS.gene072773 | 0.850977 | 1.20E-60 | -1.69E-46 |
| MS.gene057076 | MS.gene072773 | 0.883304 | 5.02E-71 | -1.69E-46 |
| MS.gene057086 | MS.gene072773 | 0.808953 | 2.40E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene072773 | 0.880115 | 7.16E-70 | -1.69E-46 |
| MS.gene057196 | MS.gene072773 | 0.849921 | 2.37E-60 | -1.69E-46 |
| MS.gene057289 | MS.gene072773 | 0.819353 | 1.21E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene072773 | 0.820717 | 5.92E-53 | -1.69E-46 |
| MS.gene057332 | MS.gene072773 | 0.830927 | 2.23E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene072773 | 0.82444 | 8.06E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene072773 | 0.856707 | 2.68E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene072773 | 0.837788 | 4.23E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene072773 | 0.836252 | 1.04E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene072773 | 0.8435 | 1.35E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene072773 | 0.872526 | 2.97E-67 | -1.69E-46 |
| MS.gene057857 | MS.gene072773 | 0.816516 | 5.31E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene072773 | 0.80457 | 2.03E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene072773 | 0.82067 | 6.07E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene072773 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene072773 | 0.820667 | 6.08E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene072773 | 0.819854 | 9.34E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene072773 | 0.856351 | 3.41E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene072773 | 0.811103 | 8.28E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene072773 | 0.855877 | 4.70E-62 | -1.69E-46 |
| MS.gene05837 | MS.gene072773 | 0.83832 | 3.08E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene072773 | 0.832566 | 8.79E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene072773 | 0.872185 | 3.86E-67 | -1.69E-46 |
| MS.gene058544 | MS.gene072773 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene072773 | 0.836862 | 7.30E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene072773 | 0.813228 | 2.85E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene072773 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene072773 | 0.875975 | 2.02E-68 | -1.69E-46 |
| MS.gene058928 | MS.gene072773 | 0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene072773 | 0.834009 | 3.84E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene072773 | 0.870865 | 1.06E-66 | -1.69E-46 |
| MS.gene05913 | MS.gene072773 | 0.822357 | 2.47E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene072773 | 0.810689 | 1.02E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene072773 | 0.858583 | 7.46E-63 | -1.69E-46 |
| MS.gene059420 | MS.gene072773 | 0.821705 | 3.50E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene072773 | 0.846785 | 1.75E-59 | -1.69E-46 |
| MS.gene059512 | MS.gene072773 | 0.810334 | 1.21E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene072773 | 0.828847 | 7.16E-55 | -1.69E-46 |
| MS.gene059674 | MS.gene072773 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene072773 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene072773 | 0.808953 | 2.40E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene072773 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene072773 | 0.825442 | 4.68E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene072773 | 0.826859 | 2.15E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene072773 | 0.8323 | 1.02E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene072773 | 0.806484 | 8.04E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene072773 | 0.82521 | 5.31E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene072773 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene072773 | 0.831698 | 1.44E-55 | -1.69E-46 |
| MS.gene060469 | MS.gene072773 | 0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene072773 | 0.817025 | 4.08E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene072773 | 0.830331 | 3.12E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene072773 | 0.804359 | 2.24E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene072773 | 0.847664 | 1.00E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene072773 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene072773 | 0.911748 | 4.28E-83 | -1.69E-46 |
| MS.gene060837 | MS.gene072773 | 0.847009 | 1.52E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene072773 | 0.863419 | 2.52E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene072773 | 0.813329 | 2.71E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene072773 | 0.820945 | 5.25E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene072773 | 0.804209 | 2.41E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene072773 | 0.864317 | 1.33E-64 | -1.69E-46 |
| MS.gene061231 | MS.gene072773 | 0.838548 | 2.69E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072773.t1 | MTR_5g010090 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 721 |
| MS.gene072773.t1 | MTR_1g082360 | 53.257 | 261 | 118 | 3 | 82 | 340 | 5 | 263 | 3.18e-93 | 280 |
| MS.gene072773.t1 | MTR_7g113920 | 50.916 | 273 | 126 | 4 | 82 | 350 | 37 | 305 | 2.01e-89 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072773.t1 | AT3G05170 | 55.263 | 266 | 111 | 4 | 82 | 343 | 9 | 270 | 5.28e-96 | 288 |
| MS.gene072773.t1 | AT1G08940 | 52.893 | 242 | 108 | 2 | 82 | 319 | 9 | 248 | 4.89e-88 | 266 |
Find 77 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTTGTGAGGCCTATTT+TGG | 0.129826 | 5.3:-3822161 | None:intergenic |
| AAAGCGCAACGCCATCTTTA+TGG | 0.148714 | 5.3:+3822536 | MS.gene072773:CDS |
| TTTGAGGGTCTCAACAATTT+TGG | 0.175363 | 5.3:+3823193 | MS.gene072773:CDS |
| CTAACAAGAATTATTCTTCT+AGG | 0.216607 | 5.3:-3822082 | None:intergenic |
| TTCTTATGAGATGGTATAAA+TGG | 0.250801 | 5.3:+3823158 | MS.gene072773:CDS |
| GCAAACAGAAGCCAACAAAA+AGG | 0.310141 | 5.3:+3823735 | MS.gene072773:CDS |
| GTTTCAAGAGTCCTTCTATA+TGG | 0.322885 | 5.3:-3822277 | None:intergenic |
| GAACAAGAGTTAAGACAGTT+TGG | 0.341634 | 5.3:+3823500 | MS.gene072773:CDS |
| AAAACGATGGTGATGAAAAT+TGG | 0.343036 | 5.3:+3822233 | MS.gene072773:CDS |
| TTTGAACGTTCAAGAATTGC+TGG | 0.343872 | 5.3:+3822322 | MS.gene072773:CDS |
| CAGATTCACCATTTGGAAAT+CGG | 0.366998 | 5.3:-3822571 | None:intergenic |
| CGGATTAGAGAACAAGATTT+CGG | 0.376273 | 5.3:+3822361 | MS.gene072773:CDS |
| CTAAGAGCAGATATTAATAT+TGG | 0.377004 | 5.3:+3823058 | MS.gene072773:CDS |
| AGAATTATTCTTCTAGGCCT+TGG | 0.386052 | 5.3:-3822076 | None:intergenic |
| TTTATGTGTCTCCATATAGA+AGG | 0.387162 | 5.3:+3822266 | MS.gene072773:CDS |
| TCAGCCGCAGATTCACCATT+TGG | 0.423620 | 5.3:-3822578 | None:intergenic |
| AGGGTACCTGATCCCAAAAT+AGG | 0.433029 | 5.3:+3822148 | MS.gene072773:CDS |
| AGAATAATTCGACTTAGTGT+TGG | 0.442612 | 5.3:-3821903 | None:intergenic |
| GAATAATTCGACTTAGTGTT+GGG | 0.449186 | 5.3:-3821902 | None:intergenic |
| CAACGTTGGAGGCTAGTAAA+GGG | 0.458660 | 5.3:-3822042 | None:intergenic |
| AGGCGAGCTTGTCATGGAAA+AGG | 0.462117 | 5.3:+3823222 | MS.gene072773:CDS |
| AAAATAGGCCTCACAAATAG+AGG | 0.464701 | 5.3:+3822163 | MS.gene072773:CDS |
| TGAGAGTGGTAGTGATGTTA+TGG | 0.472388 | 5.3:-3821849 | None:intergenic |
| ATGGACGGTTGAACAATTTG+AGG | 0.472673 | 5.3:+3823177 | MS.gene072773:CDS |
| TTGTTGGTTAGTGAATCTAC+AGG | 0.473287 | 5.3:-3821977 | None:intergenic |
| CCTGGTACGTCCATTGTTGT+TGG | 0.484419 | 5.3:-3821993 | None:intergenic |
| CACATCAAAATTCTTCTCCC+CGG | 0.485925 | 5.3:-3823095 | None:intergenic |
| AGCAATTCTTGAACGTTCAA+AGG | 0.486540 | 5.3:-3822320 | None:intergenic |
| CAGTCGTAATTCAGATCAGC+AGG | 0.495868 | 5.3:-3823672 | None:intergenic |
| TTCATGAAGATGAGGAAAGA+AGG | 0.501116 | 5.3:-3823709 | None:intergenic |
| ACATCAAAATTCTTCTCCCC+GGG | 0.506903 | 5.3:-3823094 | None:intergenic |
| CTTGTCATGGAAAAGGGTTA+TGG | 0.507893 | 5.3:+3823229 | MS.gene072773:CDS |
| GCAATTCTTGAACGTTCAAA+GGG | 0.518725 | 5.3:-3822319 | None:intergenic |
| ATTATTCTTCTAGGCCTTGG+AGG | 0.521959 | 5.3:-3822073 | None:intergenic |
| GGCGAGCTTGTCATGGAAAA+GGG | 0.526104 | 5.3:+3823223 | MS.gene072773:CDS |
| TCAACGTTGGAGGCTAGTAA+AGG | 0.527993 | 5.3:-3822043 | None:intergenic |
| TGGACGGTTGAACAATTTGA+GGG | 0.528854 | 5.3:+3823178 | MS.gene072773:CDS |
| CAATGGAGGCGAGCTTGTCA+TGG | 0.534795 | 5.3:+3823216 | MS.gene072773:CDS |
| AAAAGAAACGACCATAAAGA+TGG | 0.541482 | 5.3:-3822547 | None:intergenic |
| TTTGCTTCTTCATGAAGATG+AGG | 0.541787 | 5.3:-3823717 | None:intergenic |
| CCAACAACAATGGACGTACC+AGG | 0.544308 | 5.3:+3821993 | MS.gene072773:CDS |
| TAGGCCTCACAAATAGAGGT+AGG | 0.550075 | 5.3:+3822167 | MS.gene072773:CDS |
| TAGAGGTAGGGTTCAAGCAG+AGG | 0.554848 | 5.3:+3822180 | MS.gene072773:CDS |
| AGGTACTACATCAACGTTGG+AGG | 0.554951 | 5.3:-3822053 | None:intergenic |
| AAATGCTGATTGATCAAGAA+TGG | 0.556731 | 5.3:+3823534 | MS.gene072773:CDS |
| GATGTATACGATAGAATCAC+AGG | 0.560616 | 5.3:+3822599 | MS.gene072773:CDS |
| CTGGATTCAGAGAAGAGCCT+CGG | 0.566562 | 5.3:+3822341 | MS.gene072773:CDS |
| TGGAAAAGGGTTATGGTGGA+AGG | 0.567955 | 5.3:+3823236 | MS.gene072773:CDS |
| TGTGAAGGCATAAATTTGCA+AGG | 0.571714 | 5.3:+3823649 | MS.gene072773:intron |
| GAACCCTACCTCTATTTGTG+AGG | 0.573197 | 5.3:-3822171 | None:intergenic |
| AGAATAATTCTTGTTAGACA+TGG | 0.574414 | 5.3:+3822088 | MS.gene072773:CDS |
| GGAAAGAAGGAATTCACCAT+TGG | 0.584379 | 5.3:-3823696 | None:intergenic |
| TTAGACATGGAGAGAGTGAA+GGG | 0.586434 | 5.3:+3822101 | MS.gene072773:CDS |
| TGTTGGTTAGTGAATCTACA+GGG | 0.593467 | 5.3:-3821976 | None:intergenic |
| AACTTGGTCATCGTGTCACA+TGG | 0.596674 | 5.3:+3823118 | MS.gene072773:CDS |
| AGGCCTCACAAATAGAGGTA+GGG | 0.600664 | 5.3:+3822168 | MS.gene072773:CDS |
| GTTAGACATGGAGAGAGTGA+AGG | 0.602338 | 5.3:+3822100 | MS.gene072773:CDS |
| TATGAGATGGTATAAATGGA+CGG | 0.602499 | 5.3:+3823162 | MS.gene072773:CDS |
| TCAAAATTCTTCTCCCCGGG+TGG | 0.603303 | 5.3:-3823091 | None:intergenic |
| ATTGGACGGTATCAGCCACC+CGG | 0.616558 | 5.3:+3823076 | MS.gene072773:CDS |
| GCTAGTAAAGGGTTTATCAG+AGG | 0.616669 | 5.3:-3822031 | None:intergenic |
| AGGGTTCAAGCAGAGGAATG+TGG | 0.617736 | 5.3:+3822187 | MS.gene072773:CDS |
| TGGAGAGAGTGAAGGGAACG+TGG | 0.618176 | 5.3:+3822108 | MS.gene072773:CDS |
| TTGGACGGTATCAGCCACCC+GGG | 0.618733 | 5.3:+3823077 | MS.gene072773:CDS |
| GTCATGGAAAAGGGTTATGG+TGG | 0.622098 | 5.3:+3823232 | MS.gene072773:CDS |
| GATTCACTAACCAACAACAA+TGG | 0.627276 | 5.3:+3821983 | MS.gene072773:CDS |
| GAGCAGATATTAATATTGGA+CGG | 0.627676 | 5.3:+3823062 | MS.gene072773:CDS |
| TGGAGGTACTACATCAACGT+TGG | 0.645433 | 5.3:-3822056 | None:intergenic |
| ACGTTGATGTAGTACCTCCA+AGG | 0.654374 | 5.3:+3822059 | MS.gene072773:CDS |
| AAATCTTGTTCTCTAATCCG+AGG | 0.657767 | 5.3:-3822358 | None:intergenic |
| ATTTCCAAATGGTGAATCTG+CGG | 0.660166 | 5.3:+3822574 | MS.gene072773:CDS |
| TGGATGAGAGTGTTTACACA+AGG | 0.666652 | 5.3:+3822128 | MS.gene072773:CDS |
| AAGAACATGATTGAAAACGA+TGG | 0.668419 | 5.3:+3822220 | MS.gene072773:CDS |
| TCTGAATTACGACTGTCCAA+TGG | 0.669531 | 5.3:+3823680 | MS.gene072773:CDS |
| TTCTGTTGAGATACTGAGAG+TGG | 0.675907 | 5.3:-3821863 | None:intergenic |
| TGGACGGTATCAGCCACCCG+GGG | 0.707455 | 5.3:+3823078 | MS.gene072773:CDS |
| GGATGAGAGTGTTTACACAA+GGG | 0.722988 | 5.3:+3822129 | MS.gene072773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATACTGATTTATATGA+TGG | + | chr5.3:3823620-3823639 | MS.gene072773:intron | 15.0% |
| !!! | TTTACATACTCTTTATTTAA+CGG | - | chr5.3:3822691-3822710 | None:intergenic | 15.0% |
| !!! | TTTTCATCATTTGTAAATTA+AGG | + | chr5.3:3823425-3823444 | MS.gene072773:intron | 15.0% |
| !! | AGAAACTATGAGTAATAATT+AGG | - | chr5.3:3823578-3823597 | None:intergenic | 20.0% |
| !! | GAAACTATGAGTAATAATTA+GGG | - | chr5.3:3823577-3823596 | None:intergenic | 20.0% |
| !! | TATGATTAACAATCTAATGT+TGG | + | chr5.3:3823002-3823021 | MS.gene072773:intron | 20.0% |
| !! | TTCATATATATACTATCTTG+CGG | + | chr5.3:3822783-3822802 | MS.gene072773:intron | 20.0% |
| !! | TTGTGATTTATGTTATGTAA+GGG | + | chr5.3:3822480-3822499 | MS.gene072773:intron | 20.0% |
| !! | TTTGTGATTTATGTTATGTA+AGG | + | chr5.3:3822479-3822498 | MS.gene072773:intron | 20.0% |
| !!! | AATAATGGAGTTTATAAAGT+CGG | - | chr5.3:3822854-3822873 | None:intergenic | 20.0% |
| ! | AATCATACTTGAATATTGCA+AGG | - | chr5.3:3822989-3823008 | None:intergenic | 25.0% |
| ! | AGAATAATTCTTGTTAGACA+TGG | + | chr5.3:3822088-3822107 | MS.gene072773:CDS | 25.0% |
| ! | CTAACAAGAATTATTCTTCT+AGG | - | chr5.3:3822085-3822104 | None:intergenic | 25.0% |
| ! | CTAAGAGCAGATATTAATAT+TGG | + | chr5.3:3823058-3823077 | MS.gene072773:CDS | 25.0% |
| ! | GTAAAGTTAATCAACTGATT+AGG | + | chr5.3:3822706-3822725 | MS.gene072773:intron | 25.0% |
| ! | TACCTGTTAAATTTGTAATG+TGG | - | chr5.3:3823458-3823477 | None:intergenic | 25.0% |
| ! | TCATCGGTCATATTTAATAA+TGG | - | chr5.3:3822869-3822888 | None:intergenic | 25.0% |
| ! | TGGATTTGATATTGATACAT+AGG | + | chr5.3:3823022-3823041 | MS.gene072773:intron | 25.0% |
| ! | TTCCACATTACAAATTTAAC+AGG | + | chr5.3:3823453-3823472 | MS.gene072773:intron | 25.0% |
| ! | TTCTTATGAGATGGTATAAA+TGG | + | chr5.3:3823158-3823177 | MS.gene072773:CDS | 25.0% |
| !! | TAGTTTTCTGTCTTGTATAT+TGG | + | chr5.3:3822429-3822448 | MS.gene072773:intron | 25.0% |
| !! | TTAGAGTTTTTCTTATGAGA+TGG | + | chr5.3:3823149-3823168 | MS.gene072773:CDS | 25.0% |
| !!! | TATATGAAGCTTGTTGAAAA+TGG | - | chr5.3:3822771-3822790 | None:intergenic | 25.0% |
| AAAAGAAACGACCATAAAGA+TGG | - | chr5.3:3822550-3822569 | None:intergenic | 30.0% | |
| AAGAACATGATTGAAAACGA+TGG | + | chr5.3:3822220-3822239 | MS.gene072773:CDS | 30.0% | |
| ACAAGACAGAAAACTAAACT+AGG | - | chr5.3:3822425-3822444 | None:intergenic | 30.0% | |
| AGAATAATTCGACTTAGTGT+TGG | - | chr5.3:3821906-3821925 | None:intergenic | 30.0% | |
| ATATGATGGTCAATTTGTGA+AGG | + | chr5.3:3823634-3823653 | MS.gene072773:intron | 30.0% | |
| GAATAATTCGACTTAGTGTT+GGG | - | chr5.3:3821905-3821924 | None:intergenic | 30.0% | |
| GAGCAGATATTAATATTGGA+CGG | + | chr5.3:3823062-3823081 | MS.gene072773:CDS | 30.0% | |
| GTCGGTTATTATTGTTAGTT+CGG | - | chr5.3:3822836-3822855 | None:intergenic | 30.0% | |
| TAAATAAAAGTCTGCGATCA+AGG | - | chr5.3:3822957-3822976 | None:intergenic | 30.0% | |
| TATGAGATGGTATAAATGGA+CGG | + | chr5.3:3823162-3823181 | MS.gene072773:CDS | 30.0% | |
| TGACTATAATTGAGGTTCAT+CGG | - | chr5.3:3822885-3822904 | None:intergenic | 30.0% | |
| TTTATGTGTCTCCATATAGA+AGG | + | chr5.3:3822266-3822285 | MS.gene072773:CDS | 30.0% | |
| ! | AAAACGATGGTGATGAAAAT+TGG | + | chr5.3:3822233-3822252 | MS.gene072773:CDS | 30.0% |
| ! | AAATGCTGATTGATCAAGAA+TGG | + | chr5.3:3823534-3823553 | MS.gene072773:CDS | 30.0% |
| ! | TTTATCAGAGGATTTTTCTC+TGG | - | chr5.3:3822022-3822041 | None:intergenic | 30.0% |
| !! | GAAGAATTTTGATGTGAACT+TGG | + | chr5.3:3823102-3823121 | MS.gene072773:CDS | 30.0% |
| !!! | TTCTTTTACCGATTTCCAAA+TGG | + | chr5.3:3822563-3822582 | MS.gene072773:CDS | 30.0% |
| AAAATAGGCCTCACAAATAG+AGG | + | chr5.3:3822163-3822182 | MS.gene072773:CDS | 35.0% | |
| AAACATCAGTTGCTATAGAG+AGG | - | chr5.3:3823279-3823298 | None:intergenic | 35.0% | |
| AAATCTTGTTCTCTAATCCG+AGG | - | chr5.3:3822361-3822380 | None:intergenic | 35.0% | |
| AGAATTATTCTTCTAGGCCT+TGG | - | chr5.3:3822079-3822098 | None:intergenic | 35.0% | |
| AGCAATTCTTGAACGTTCAA+AGG | - | chr5.3:3822323-3822342 | None:intergenic | 35.0% | |
| ATTTCCAAATGGTGAATCTG+CGG | + | chr5.3:3822574-3822593 | MS.gene072773:CDS | 35.0% | |
| CAAACAGAAGCCAACAAAAA+GGG | + | chr5.3:3823736-3823755 | MS.gene072773:CDS | 35.0% | |
| CAGATTCACCATTTGGAAAT+CGG | - | chr5.3:3822574-3822593 | None:intergenic | 35.0% | |
| GAACAAGAGTTAAGACAGTT+TGG | + | chr5.3:3823500-3823519 | MS.gene072773:CDS | 35.0% | |
| GATGTATACGATAGAATCAC+AGG | + | chr5.3:3822599-3822618 | MS.gene072773:CDS | 35.0% | |
| GATTCACTAACCAACAACAA+TGG | + | chr5.3:3821983-3822002 | MS.gene072773:CDS | 35.0% | |
| GCAATTCTTGAACGTTCAAA+GGG | - | chr5.3:3822322-3822341 | None:intergenic | 35.0% | |
| GTTTCAAGAGTCCTTCTATA+TGG | - | chr5.3:3822280-3822299 | None:intergenic | 35.0% | |
| TCTCTATAGCAACTGATGTT+TGG | + | chr5.3:3823278-3823297 | MS.gene072773:intron | 35.0% | |
| TTATTGTTAGTTCGGCTCAA+TGG | - | chr5.3:3822828-3822847 | None:intergenic | 35.0% | |
| TTCATGAAGATGAGGAAAGA+AGG | - | chr5.3:3823712-3823731 | None:intergenic | 35.0% | |
| TTTGAACGTTCAAGAATTGC+TGG | + | chr5.3:3822322-3822341 | MS.gene072773:CDS | 35.0% | |
| TTTGCTTCTTCATGAAGATG+AGG | - | chr5.3:3823720-3823739 | None:intergenic | 35.0% | |
| ! | CGGATTAGAGAACAAGATTT+CGG | + | chr5.3:3822361-3822380 | MS.gene072773:CDS | 35.0% |
| ! | CTATTTGTGAGGCCTATTTT+GGG | - | chr5.3:3822163-3822182 | None:intergenic | 35.0% |
| ! | TCTATTTGTGAGGCCTATTT+TGG | - | chr5.3:3822164-3822183 | None:intergenic | 35.0% |
| ! | TGTGAAGGCATAAATTTGCA+AGG | + | chr5.3:3823649-3823668 | MS.gene072773:intron | 35.0% |
| ! | TGTTGGTTAGTGAATCTACA+GGG | - | chr5.3:3821979-3821998 | None:intergenic | 35.0% |
| ! | TTGTTGGTTAGTGAATCTAC+AGG | - | chr5.3:3821980-3821999 | None:intergenic | 35.0% |
| ! | TTTGAGGGTCTCAACAATTT+TGG | + | chr5.3:3823193-3823212 | MS.gene072773:CDS | 35.0% |
| !! | CAACTGATTAGGTTTGTTAG+AGG | + | chr5.3:3822717-3822736 | MS.gene072773:intron | 35.0% |
| !! | TAGGTTTGTTAGAGGTAGTT+AGG | + | chr5.3:3822725-3822744 | MS.gene072773:intron | 35.0% |
| AACCTCAATTATAGTCACGC+TGG | + | chr5.3:3822888-3822907 | MS.gene072773:intron | 40.0% | |
| ACATCAAAATTCTTCTCCCC+GGG | - | chr5.3:3823097-3823116 | None:intergenic | 40.0% | |
| ACCTCAATTATAGTCACGCT+GGG | + | chr5.3:3822889-3822908 | MS.gene072773:intron | 40.0% | |
| AGCAACTGATGTTTGGTATC+TGG | + | chr5.3:3823285-3823304 | MS.gene072773:intron | 40.0% | |
| ATGGACGGTTGAACAATTTG+AGG | + | chr5.3:3823177-3823196 | MS.gene072773:CDS | 40.0% | |
| ATGTACACGACATTGATACG+TGG | - | chr5.3:3823370-3823389 | None:intergenic | 40.0% | |
| ATTATTCTTCTAGGCCTTGG+AGG | - | chr5.3:3822076-3822095 | None:intergenic | 40.0% | |
| CACATCAAAATTCTTCTCCC+CGG | - | chr5.3:3823098-3823117 | None:intergenic | 40.0% | |
| CTTGTCATGGAAAAGGGTTA+TGG | + | chr5.3:3823229-3823248 | MS.gene072773:CDS | 40.0% | |
| GCAAACAGAAGCCAACAAAA+AGG | + | chr5.3:3823735-3823754 | MS.gene072773:CDS | 40.0% | |
| GCTAGTAAAGGGTTTATCAG+AGG | - | chr5.3:3822034-3822053 | None:intergenic | 40.0% | |
| GGAAAGAAGGAATTCACCAT+TGG | - | chr5.3:3823699-3823718 | None:intergenic | 40.0% | |
| TCTGAATTACGACTGTCCAA+TGG | + | chr5.3:3823680-3823699 | MS.gene072773:CDS | 40.0% | |
| TGGACGGTTGAACAATTTGA+GGG | + | chr5.3:3823178-3823197 | MS.gene072773:CDS | 40.0% | |
| TTAGACATGGAGAGAGTGAA+GGG | + | chr5.3:3822101-3822120 | MS.gene072773:CDS | 40.0% | |
| TTCTGTTGAGATACTGAGAG+TGG | - | chr5.3:3821866-3821885 | None:intergenic | 40.0% | |
| ! | GTGAATCTACAGGGTCTTTT+TGG | - | chr5.3:3821970-3821989 | None:intergenic | 40.0% |
| ! | TGAGAGTGGTAGTGATGTTA+TGG | - | chr5.3:3821852-3821871 | None:intergenic | 40.0% |
| !! | AGGATTTTTCTCTGGAAACC+TGG | - | chr5.3:3822014-3822033 | None:intergenic | 40.0% |
| !! | CTCAACAATTTTGGCAATGG+AGG | + | chr5.3:3823202-3823221 | MS.gene072773:CDS | 40.0% |
| !! | GGATGAGAGTGTTTACACAA+GGG | + | chr5.3:3822129-3822148 | MS.gene072773:CDS | 40.0% |
| !! | GGTCTCAACAATTTTGGCAA+TGG | + | chr5.3:3823199-3823218 | MS.gene072773:CDS | 40.0% |
| !! | TGGATGAGAGTGTTTACACA+AGG | + | chr5.3:3822128-3822147 | MS.gene072773:CDS | 40.0% |
| !!! | CTTTTTGGCTGTGACAACAT+TGG | - | chr5.3:3821955-3821974 | None:intergenic | 40.0% |
| AAAGCGCAACGCCATCTTTA+TGG | + | chr5.3:3822536-3822555 | MS.gene072773:CDS | 45.0% | |
| AACTTGGTCATCGTGTCACA+TGG | + | chr5.3:3823118-3823137 | MS.gene072773:CDS | 45.0% | |
| ACGTTGATGTAGTACCTCCA+AGG | + | chr5.3:3822059-3822078 | MS.gene072773:CDS | 45.0% | |
| AGGCCTCACAAATAGAGGTA+GGG | + | chr5.3:3822168-3822187 | MS.gene072773:CDS | 45.0% | |
| AGGTACTACATCAACGTTGG+AGG | - | chr5.3:3822056-3822075 | None:intergenic | 45.0% | |
| CAACGTTGGAGGCTAGTAAA+GGG | - | chr5.3:3822045-3822064 | None:intergenic | 45.0% | |
| CAGTCGTAATTCAGATCAGC+AGG | - | chr5.3:3823675-3823694 | None:intergenic | 45.0% | |
| CCTCAATTATAGTCACGCTG+GGG | + | chr5.3:3822890-3822909 | MS.gene072773:intron | 45.0% | |
| GAACCCTACCTCTATTTGTG+AGG | - | chr5.3:3822174-3822193 | None:intergenic | 45.0% | |
| GGCTCAATGGCAACTAAACA+TGG | - | chr5.3:3822815-3822834 | None:intergenic | 45.0% | |
| GTCATGGAAAAGGGTTATGG+TGG | + | chr5.3:3823232-3823251 | MS.gene072773:CDS | 45.0% | |
| GTTAGACATGGAGAGAGTGA+AGG | + | chr5.3:3822100-3822119 | MS.gene072773:CDS | 45.0% | |
| TAGGCCTCACAAATAGAGGT+AGG | + | chr5.3:3822167-3822186 | MS.gene072773:CDS | 45.0% | |
| TCAACGTTGGAGGCTAGTAA+AGG | - | chr5.3:3822046-3822065 | None:intergenic | 45.0% | |
| ! | AGGGTACCTGATCCCAAAAT+AGG | + | chr5.3:3822148-3822167 | MS.gene072773:CDS | 45.0% |
| ! | TGGAAAAGGGTTATGGTGGA+AGG | + | chr5.3:3823236-3823255 | MS.gene072773:CDS | 45.0% |
| !! | TGGAGGTACTACATCAACGT+TGG | - | chr5.3:3822059-3822078 | None:intergenic | 45.0% |
| AGGCGAGCTTGTCATGGAAA+AGG | + | chr5.3:3823222-3823241 | MS.gene072773:CDS | 50.0% | |
| AGGGTTCAAGCAGAGGAATG+TGG | + | chr5.3:3822187-3822206 | MS.gene072773:CDS | 50.0% | |
| CCAACAACAATGGACGTACC+AGG | + | chr5.3:3821993-3822012 | MS.gene072773:CDS | 50.0% | |
| CCCCAGCGTGACTATAATTG+AGG | - | chr5.3:3822893-3822912 | None:intergenic | 50.0% | |
| CCTGGTACGTCCATTGTTGT+TGG | - | chr5.3:3821996-3822015 | None:intergenic | 50.0% | |
| CTGGATTCAGAGAAGAGCCT+CGG | + | chr5.3:3822341-3822360 | MS.gene072773:CDS | 50.0% | |
| GGCGAGCTTGTCATGGAAAA+GGG | + | chr5.3:3823223-3823242 | MS.gene072773:CDS | 50.0% | |
| TAGAGGTAGGGTTCAAGCAG+AGG | + | chr5.3:3822180-3822199 | MS.gene072773:CDS | 50.0% | |
| TCAAAATTCTTCTCCCCGGG+TGG | - | chr5.3:3823094-3823113 | None:intergenic | 50.0% | |
| TCAGCCGCAGATTCACCATT+TGG | - | chr5.3:3822581-3822600 | None:intergenic | 50.0% | |
| !!! | GTGAGGCCTATTTTGGGATC+AGG | - | chr5.3:3822157-3822176 | None:intergenic | 50.0% |
| ATTGGACGGTATCAGCCACC+CGG | + | chr5.3:3823076-3823095 | MS.gene072773:CDS | 55.0% | |
| CAATGGAGGCGAGCTTGTCA+TGG | + | chr5.3:3823216-3823235 | MS.gene072773:CDS | 55.0% | |
| TGGAGAGAGTGAAGGGAACG+TGG | + | chr5.3:3822108-3822127 | MS.gene072773:CDS | 55.0% | |
| ! | GCTGGGGATTGCAGTCTTGT+AGG | + | chr5.3:3822906-3822925 | MS.gene072773:intron | 55.0% |
| TTGGACGGTATCAGCCACCC+GGG | + | chr5.3:3823077-3823096 | MS.gene072773:CDS | 60.0% | |
| TGGACGGTATCAGCCACCCG+GGG | + | chr5.3:3823078-3823097 | MS.gene072773:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3821839 | 3823761 | 3821839 | ID=MS.gene072773 |
| chr5.3 | mRNA | 3821839 | 3823761 | 3821839 | ID=MS.gene072773.t1;Parent=MS.gene072773 |
| chr5.3 | exon | 3821839 | 3822382 | 3821839 | ID=MS.gene072773.t1.exon1;Parent=MS.gene072773.t1 |
| chr5.3 | CDS | 3821839 | 3822382 | 3821839 | ID=cds.MS.gene072773.t1;Parent=MS.gene072773.t1 |
| chr5.3 | exon | 3822501 | 3822620 | 3822501 | ID=MS.gene072773.t1.exon2;Parent=MS.gene072773.t1 |
| chr5.3 | CDS | 3822501 | 3822620 | 3822501 | ID=cds.MS.gene072773.t1;Parent=MS.gene072773.t1 |
| chr5.3 | exon | 3823044 | 3823257 | 3823044 | ID=MS.gene072773.t1.exon3;Parent=MS.gene072773.t1 |
| chr5.3 | CDS | 3823044 | 3823257 | 3823044 | ID=cds.MS.gene072773.t1;Parent=MS.gene072773.t1 |
| chr5.3 | exon | 3823475 | 3823555 | 3823475 | ID=MS.gene072773.t1.exon4;Parent=MS.gene072773.t1 |
| chr5.3 | CDS | 3823475 | 3823555 | 3823475 | ID=cds.MS.gene072773.t1;Parent=MS.gene072773.t1 |
| chr5.3 | exon | 3823656 | 3823761 | 3823656 | ID=MS.gene072773.t1.exon5;Parent=MS.gene072773.t1 |
| chr5.3 | CDS | 3823656 | 3823761 | 3823656 | ID=cds.MS.gene072773.t1;Parent=MS.gene072773.t1 |
| Gene Sequence |
| Protein sequence |
