Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20275.t1 | XP_003611625.1 | 98.7 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.00E+00 | 1154.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20275.t1 | Q66GP0 | 64.8 | 625 | 189 | 9 | 16 | 630 | 1 | 604 | 2.1e-202 | 706.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20275.t1 | G7IU11 | 98.7 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.0e+00 | 1154.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene20275 | 0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene20275 | 0.815871 | 7.40E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene20275 | 0.844422 | 7.64E-59 | -1.69E-46 |
| MS.gene049351 | MS.gene20275 | 0.813935 | 1.99E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene20275 | 0.862273 | 5.70E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene20275 | 0.835058 | 2.09E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene20275 | 0.801633 | 8.21E-49 | -1.69E-46 |
| MS.gene049488 | MS.gene20275 | 0.804686 | 1.92E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene20275 | 0.832408 | 9.61E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene20275 | 0.854395 | 1.27E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene20275 | 0.850324 | 1.83E-60 | -1.69E-46 |
| MS.gene049681 | MS.gene20275 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene20275 | 0.842655 | 2.27E-58 | -1.69E-46 |
| MS.gene049910 | MS.gene20275 | 0.833753 | 4.45E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene20275 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene20275 | 0.828418 | 9.09E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene20275 | 0.879632 | 1.06E-69 | -1.69E-46 |
| MS.gene050397 | MS.gene20275 | 0.852059 | 5.92E-61 | -1.69E-46 |
| MS.gene050404 | MS.gene20275 | 0.801097 | 1.06E-48 | -1.69E-46 |
| MS.gene050406 | MS.gene20275 | 0.823508 | 1.33E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene20275 | 0.849288 | 3.56E-60 | -1.69E-46 |
| MS.gene050464 | MS.gene20275 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene20275 | 0.817392 | 3.38E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene20275 | 0.867353 | 1.46E-65 | -1.69E-46 |
| MS.gene050971 | MS.gene20275 | 0.822847 | 1.90E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene20275 | 0.850277 | 1.88E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene20275 | 0.861361 | 1.08E-63 | -1.69E-46 |
| MS.gene051255 | MS.gene20275 | 0.80489 | 1.74E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene20275 | 0.842987 | 1.85E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene20275 | 0.80488 | 1.75E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene20275 | 0.828637 | 8.05E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene20275 | 0.827801 | 1.28E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene20275 | 0.804105 | 2.53E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene20275 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene20275 | 0.838448 | 2.86E-57 | -1.69E-46 |
| MS.gene051877 | MS.gene20275 | 0.807989 | 3.86E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene20275 | -0.842204 | 2.98E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene20275 | 0.856615 | 2.86E-62 | -1.69E-46 |
| MS.gene052078 | MS.gene20275 | 0.822334 | 2.50E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene20275 | 0.818625 | 1.78E-52 | -1.69E-46 |
| MS.gene052136 | MS.gene20275 | 0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene20275 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene20275 | 0.877673 | 5.20E-69 | -1.69E-46 |
| MS.gene052207 | MS.gene20275 | 0.812721 | 3.68E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene20275 | 0.893505 | 5.91E-75 | -1.69E-46 |
| MS.gene052255 | MS.gene20275 | 0.824488 | 7.86E-54 | -1.69E-46 |
| MS.gene052287 | MS.gene20275 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene20275 | 0.861399 | 1.05E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene20275 | 0.804379 | 2.22E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene20275 | 0.88905 | 3.43E-73 | -1.69E-46 |
| MS.gene052414 | MS.gene20275 | 0.809131 | 2.20E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene20275 | 0.83165 | 1.48E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene20275 | 0.841739 | 3.96E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene20275 | 0.815702 | 8.08E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene20275 | 0.876009 | 1.96E-68 | -1.69E-46 |
| MS.gene053073 | MS.gene20275 | 0.804649 | 1.95E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene20275 | 0.808297 | 3.32E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene20275 | 0.834208 | 3.42E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene20275 | 0.859306 | 4.53E-63 | -1.69E-46 |
| MS.gene053449 | MS.gene20275 | 0.820711 | 5.94E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene20275 | 0.840477 | 8.49E-58 | -1.69E-46 |
| MS.gene053758 | MS.gene20275 | 0.83279 | 7.73E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene20275 | 0.826938 | 2.06E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene20275 | 0.871162 | 8.43E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene20275 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene20275 | 0.814231 | 1.71E-51 | -1.69E-46 |
| MS.gene054010 | MS.gene20275 | 0.831726 | 1.42E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene20275 | 0.842527 | 2.45E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene20275 | 0.838034 | 3.66E-57 | -1.69E-46 |
| MS.gene054013 | MS.gene20275 | 0.836933 | 7.00E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene20275 | 0.832689 | 8.19E-56 | -1.69E-46 |
| MS.gene054183 | MS.gene20275 | 0.836192 | 1.08E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene20275 | 0.855392 | 6.51E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene20275 | 0.848873 | 4.64E-60 | -1.69E-46 |
| MS.gene054542 | MS.gene20275 | 0.807543 | 4.80E-50 | -1.69E-46 |
| MS.gene054618 | MS.gene20275 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene20275 | 0.804513 | 2.08E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene20275 | 0.823365 | 1.44E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene20275 | 0.802983 | 4.33E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene20275 | 0.810368 | 1.19E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene20275 | 0.811077 | 8.39E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene20275 | 0.9135 | 5.73E-84 | -1.69E-46 |
| MS.gene055277 | MS.gene20275 | 0.860399 | 2.12E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene20275 | 0.811768 | 5.93E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene20275 | 0.816174 | 6.34E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene20275 | 0.835532 | 1.59E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene20275 | 0.83996 | 1.16E-57 | -1.69E-46 |
| MS.gene055533 | MS.gene20275 | 0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene20275 | 0.848074 | 7.73E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene20275 | 0.803689 | 3.09E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene20275 | 0.848694 | 5.21E-60 | -1.69E-46 |
| MS.gene055666 | MS.gene20275 | 0.816287 | 5.98E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene20275 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene20275 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene05594 | MS.gene20275 | 0.807932 | 3.97E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene20275 | 0.893308 | 7.09E-75 | -1.69E-46 |
| MS.gene056407 | MS.gene20275 | 0.849081 | 4.06E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene20275 | 0.831954 | 1.25E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene20275 | 0.860961 | 1.43E-63 | -1.69E-46 |
| MS.gene056609 | MS.gene20275 | 0.838535 | 2.71E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene20275 | 0.827842 | 1.25E-54 | -1.69E-46 |
| MS.gene05663 | MS.gene20275 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene20275 | 0.847643 | 1.02E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene20275 | 0.824475 | 7.91E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene20275 | 0.805971 | 1.03E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene20275 | 0.804845 | 1.78E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene20275 | 0.805548 | 1.27E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene20275 | 0.899369 | 2.12E-77 | -1.69E-46 |
| MS.gene057121 | MS.gene20275 | 0.802836 | 4.64E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene20275 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene20275 | 0.835235 | 1.89E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene20275 | 0.813375 | 2.64E-51 | -1.69E-46 |
| MS.gene057330 | MS.gene20275 | 0.815091 | 1.10E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene20275 | 0.830956 | 2.19E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene20275 | 0.833964 | 3.94E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene20275 | 0.861137 | 1.27E-63 | -1.69E-46 |
| MS.gene057449 | MS.gene20275 | 0.85478 | 9.80E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene20275 | 0.862818 | 3.87E-64 | -1.69E-46 |
| MS.gene057469 | MS.gene20275 | 0.827403 | 1.60E-54 | -1.69E-46 |
| MS.gene057476 | MS.gene20275 | 0.824528 | 7.69E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene20275 | 0.886197 | 4.22E-72 | -1.69E-46 |
| MS.gene057779 | MS.gene20275 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene057782 | MS.gene20275 | 0.809699 | 1.66E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene20275 | 0.823329 | 1.47E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene20275 | 0.875122 | 3.95E-68 | -1.69E-46 |
| MS.gene057825 | MS.gene20275 | 0.824967 | 6.06E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene20275 | 0.866679 | 2.39E-65 | -1.69E-46 |
| MS.gene058007 | MS.gene20275 | 0.844972 | 5.43E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene20275 | 0.807455 | 5.01E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene20275 | 0.854153 | 1.49E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene20275 | 0.827554 | 1.47E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene20275 | 0.827929 | 1.19E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene20275 | 0.814861 | 1.24E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene20275 | 0.84283 | 2.03E-58 | -1.69E-46 |
| MS.gene05842 | MS.gene20275 | 0.834416 | 3.03E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene20275 | 0.804663 | 1.94E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene20275 | 0.860317 | 2.25E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene20275 | 0.806348 | 8.59E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene20275 | 0.822973 | 1.78E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene20275 | 0.800092 | 1.69E-48 | -1.69E-46 |
| MS.gene058787 | MS.gene20275 | 0.824637 | 7.25E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene20275 | 0.845527 | 3.84E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene20275 | 0.866434 | 2.86E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene20275 | 0.834188 | 3.46E-56 | -1.69E-46 |
| MS.gene058995 | MS.gene20275 | 0.863216 | 2.92E-64 | -1.69E-46 |
| MS.gene059011 | MS.gene20275 | 0.848786 | 4.91E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene20275 | 0.897377 | 1.49E-76 | -1.69E-46 |
| MS.gene059082 | MS.gene20275 | 0.808185 | 3.51E-50 | -1.69E-46 |
| MS.gene059141 | MS.gene20275 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene20275 | 0.851826 | 6.89E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene20275 | 0.84542 | 4.11E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene20275 | 0.848989 | 4.31E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene20275 | 0.867141 | 1.70E-65 | -1.69E-46 |
| MS.gene059462 | MS.gene20275 | 0.830484 | 2.86E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene20275 | 0.829314 | 5.52E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene20275 | 0.88144 | 2.40E-70 | -1.69E-46 |
| MS.gene059674 | MS.gene20275 | 0.837661 | 4.56E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene20275 | 0.850545 | 1.58E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene20275 | 0.899131 | 2.68E-77 | -1.69E-46 |
| MS.gene059692 | MS.gene20275 | 0.903696 | 2.66E-79 | -1.69E-46 |
| MS.gene059695 | MS.gene20275 | 0.904196 | 1.58E-79 | -1.69E-46 |
| MS.gene059711 | MS.gene20275 | 0.830771 | 2.43E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene20275 | 0.860601 | 1.84E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene20275 | 0.847619 | 1.03E-59 | -1.69E-46 |
| MS.gene059876 | MS.gene20275 | 0.842183 | 3.02E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene20275 | 0.851598 | 8.00E-61 | -1.69E-46 |
| MS.gene059974 | MS.gene20275 | 0.824489 | 7.85E-54 | -1.69E-46 |
| MS.gene060247 | MS.gene20275 | 0.829726 | 4.38E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene20275 | 0.882444 | 1.04E-70 | -1.69E-46 |
| MS.gene060403 | MS.gene20275 | 0.865167 | 7.18E-65 | -1.69E-46 |
| MS.gene060407 | MS.gene20275 | 0.813774 | 2.16E-51 | -1.69E-46 |
| MS.gene060469 | MS.gene20275 | 0.806856 | 6.71E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene20275 | 0.83198 | 1.23E-55 | -1.69E-46 |
| MS.gene060559 | MS.gene20275 | 0.801534 | 8.61E-49 | -1.69E-46 |
| MS.gene060569 | MS.gene20275 | 0.811223 | 7.79E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene20275 | 0.844347 | 8.00E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene20275 | 0.853949 | 1.70E-61 | -1.69E-46 |
| MS.gene060986 | MS.gene20275 | 0.822079 | 2.87E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene20275 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene20275 | 0.91398 | 3.27E-84 | -1.69E-46 |
| MS.gene061051 | MS.gene20275 | -0.866553 | 2.62E-65 | -1.69E-46 |
| MS.gene061154 | MS.gene20275 | 0.829584 | 4.74E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene20275 | 0.831932 | 1.26E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20275.t1 | MTR_5g016060 | 98.730 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1286 |
| MS.gene20275.t1 | MTR_5g016060 | 98.643 | 516 | 7 | 0 | 115 | 630 | 1 | 516 | 0.0 | 1053 |
| MS.gene20275.t1 | MTR_4g095430 | 70.279 | 609 | 161 | 9 | 28 | 630 | 1 | 595 | 0.0 | 854 |
| MS.gene20275.t1 | MTR_4g022330 | 41.694 | 614 | 316 | 8 | 6 | 606 | 1 | 585 | 1.67e-166 | 489 |
| MS.gene20275.t1 | MTR_1g088885 | 41.784 | 639 | 300 | 17 | 25 | 630 | 22 | 621 | 1.20e-157 | 467 |
| MS.gene20275.t1 | MTR_7g108290 | 43.716 | 549 | 280 | 10 | 25 | 551 | 22 | 563 | 6.16e-151 | 451 |
| MS.gene20275.t1 | MTR_5g075640 | 39.094 | 596 | 297 | 7 | 24 | 606 | 9 | 551 | 8.69e-146 | 435 |
| MS.gene20275.t1 | MTR_3g062540 | 40.681 | 617 | 300 | 12 | 24 | 630 | 8 | 568 | 5.22e-145 | 432 |
| MS.gene20275.t1 | MTR_7g073980 | 41.516 | 607 | 310 | 16 | 35 | 626 | 29 | 605 | 7.14e-142 | 427 |
| MS.gene20275.t1 | MTR_4g093850 | 38.356 | 584 | 289 | 8 | 29 | 551 | 33 | 606 | 7.13e-132 | 402 |
| MS.gene20275.t1 | MTR_5g075640 | 37.321 | 560 | 285 | 7 | 60 | 606 | 2 | 508 | 2.35e-126 | 384 |
| MS.gene20275.t1 | MTR_3g062540 | 39.587 | 581 | 285 | 12 | 60 | 630 | 2 | 526 | 2.84e-126 | 383 |
| MS.gene20275.t1 | MTR_2g009340 | 36.780 | 590 | 298 | 7 | 28 | 551 | 32 | 612 | 4.41e-126 | 388 |
| MS.gene20275.t1 | MTR_8g090220 | 35.593 | 590 | 301 | 12 | 10 | 551 | 19 | 577 | 1.45e-117 | 364 |
| MS.gene20275.t1 | MTR_2g018750 | 35.636 | 550 | 299 | 10 | 34 | 536 | 20 | 561 | 1.46e-114 | 355 |
| MS.gene20275.t1 | MTR_8g090220 | 37.209 | 516 | 259 | 9 | 10 | 488 | 19 | 506 | 5.59e-114 | 351 |
| MS.gene20275.t1 | MTR_2g084595 | 35.043 | 585 | 341 | 13 | 24 | 576 | 7 | 584 | 5.65e-114 | 355 |
| MS.gene20275.t1 | MTR_8g078900 | 34.522 | 617 | 326 | 14 | 24 | 567 | 1 | 612 | 3.76e-113 | 353 |
| MS.gene20275.t1 | MTR_1g094850 | 37.525 | 493 | 271 | 7 | 34 | 500 | 20 | 501 | 4.09e-109 | 341 |
| MS.gene20275.t1 | MTR_8g078900 | 34.642 | 586 | 308 | 13 | 52 | 567 | 2 | 582 | 1.18e-107 | 338 |
| MS.gene20275.t1 | MTR_5g032780 | 37.244 | 537 | 241 | 10 | 36 | 505 | 22 | 529 | 3.96e-107 | 337 |
| MS.gene20275.t1 | MTR_8g078900 | 36.194 | 536 | 287 | 12 | 82 | 567 | 42 | 572 | 7.64e-104 | 328 |
| MS.gene20275.t1 | MTR_1g106430 | 38.205 | 479 | 259 | 11 | 37 | 493 | 25 | 488 | 3.21e-103 | 327 |
| MS.gene20275.t1 | MTR_1g064360 | 35.306 | 490 | 269 | 7 | 34 | 499 | 20 | 485 | 3.79e-103 | 324 |
| MS.gene20275.t1 | MTR_5g015790 | 38.936 | 470 | 264 | 9 | 37 | 493 | 24 | 483 | 3.55e-102 | 324 |
| MS.gene20275.t1 | MTR_1g014070 | 38.136 | 472 | 268 | 11 | 36 | 491 | 23 | 486 | 7.53e-101 | 320 |
| MS.gene20275.t1 | MTR_4g093850 | 38.248 | 468 | 225 | 6 | 29 | 442 | 33 | 490 | 2.83e-100 | 316 |
| MS.gene20275.t1 | MTR_2g048390 | 36.818 | 440 | 250 | 8 | 29 | 442 | 15 | 452 | 1.13e-94 | 299 |
| MS.gene20275.t1 | MTR_4g134210 | 35.408 | 466 | 281 | 7 | 36 | 493 | 22 | 475 | 3.21e-93 | 300 |
| MS.gene20275.t1 | MTR_8g069330 | 35.433 | 508 | 270 | 12 | 43 | 519 | 29 | 509 | 6.33e-88 | 285 |
| MS.gene20275.t1 | MTR_2g027410 | 35.000 | 460 | 275 | 7 | 39 | 493 | 25 | 465 | 3.79e-85 | 278 |
| MS.gene20275.t1 | MTR_8g078900 | 35.043 | 468 | 250 | 11 | 24 | 442 | 1 | 463 | 1.67e-83 | 270 |
| MS.gene20275.t1 | MTR_1g082690 | 30.996 | 542 | 323 | 12 | 26 | 554 | 44 | 547 | 1.76e-80 | 265 |
| MS.gene20275.t1 | MTR_2g084595 | 34.459 | 444 | 261 | 11 | 24 | 442 | 7 | 445 | 5.88e-80 | 260 |
| MS.gene20275.t1 | MTR_1g105870 | 60.455 | 220 | 61 | 4 | 47 | 263 | 38 | 234 | 2.34e-79 | 252 |
| MS.gene20275.t1 | MTR_8g078900 | 37.468 | 387 | 211 | 9 | 82 | 442 | 42 | 423 | 8.67e-75 | 246 |
| MS.gene20275.t1 | MTR_2g027410 | 34.223 | 412 | 247 | 7 | 87 | 493 | 1 | 393 | 8.63e-69 | 232 |
| MS.gene20275.t1 | MTR_4g011530 | 39.362 | 282 | 152 | 4 | 219 | 494 | 46 | 314 | 2.26e-58 | 203 |
| MS.gene20275.t1 | MTR_2g102730 | 36.119 | 335 | 187 | 6 | 219 | 544 | 24 | 340 | 2.95e-55 | 194 |
| MS.gene20275.t1 | MTR_4g045767 | 27.405 | 551 | 331 | 19 | 43 | 558 | 11 | 527 | 4.38e-49 | 180 |
| MS.gene20275.t1 | MTR_4g074190 | 25.185 | 540 | 345 | 15 | 43 | 551 | 6 | 517 | 5.63e-41 | 157 |
| MS.gene20275.t1 | MTR_4g074190 | 25.151 | 497 | 317 | 12 | 82 | 551 | 3 | 471 | 5.54e-39 | 150 |
| MS.gene20275.t1 | MTR_1g035720 | 25.801 | 562 | 329 | 20 | 43 | 562 | 6 | 521 | 2.89e-38 | 149 |
| MS.gene20275.t1 | MTR_4g074190 | 24.594 | 431 | 277 | 12 | 43 | 444 | 6 | 417 | 3.61e-31 | 127 |
| MS.gene20275.t1 | MTR_2g010890 | 25.799 | 407 | 250 | 13 | 107 | 495 | 2 | 374 | 3.95e-26 | 112 |
| MS.gene20275.t1 | MTR_2g048375 | 43.158 | 95 | 50 | 3 | 459 | 551 | 1 | 93 | 4.51e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20275.t1 | AT5G67385 | 67.851 | 619 | 180 | 8 | 16 | 630 | 1 | 604 | 0.0 | 826 |
| MS.gene20275.t1 | AT5G67385 | 67.770 | 574 | 166 | 8 | 61 | 630 | 1 | 559 | 0.0 | 759 |
| MS.gene20275.t1 | AT5G67385 | 67.770 | 574 | 166 | 8 | 61 | 630 | 1 | 559 | 0.0 | 759 |
| MS.gene20275.t1 | AT5G67385 | 67.770 | 574 | 166 | 8 | 61 | 630 | 1 | 559 | 0.0 | 759 |
| MS.gene20275.t1 | AT5G67385 | 67.770 | 574 | 166 | 8 | 61 | 630 | 1 | 559 | 0.0 | 759 |
| MS.gene20275.t1 | AT3G49970 | 54.795 | 584 | 185 | 15 | 52 | 630 | 6 | 515 | 0.0 | 583 |
| MS.gene20275.t1 | AT3G49970 | 54.795 | 584 | 185 | 15 | 52 | 630 | 6 | 515 | 0.0 | 583 |
| MS.gene20275.t1 | AT5G48800 | 45.017 | 602 | 275 | 12 | 20 | 606 | 22 | 582 | 5.73e-164 | 483 |
| MS.gene20275.t1 | AT2G30520 | 40.514 | 622 | 313 | 10 | 24 | 630 | 14 | 593 | 3.65e-151 | 449 |
| MS.gene20275.t1 | AT1G03010 | 40.678 | 649 | 308 | 15 | 24 | 630 | 21 | 634 | 6.69e-150 | 447 |
| MS.gene20275.t1 | AT1G03010 | 40.852 | 634 | 299 | 14 | 39 | 630 | 8 | 607 | 1.25e-147 | 441 |
| MS.gene20275.t1 | AT1G03010 | 40.852 | 634 | 299 | 14 | 39 | 630 | 34 | 633 | 1.61e-147 | 441 |
| MS.gene20275.t1 | AT2G47860 | 42.986 | 556 | 270 | 12 | 25 | 551 | 23 | 560 | 1.10e-143 | 431 |
| MS.gene20275.t1 | AT2G47860 | 41.278 | 579 | 270 | 13 | 25 | 551 | 23 | 583 | 2.13e-138 | 419 |
| MS.gene20275.t1 | AT3G08570 | 42.589 | 533 | 278 | 13 | 35 | 551 | 30 | 550 | 3.75e-134 | 406 |
| MS.gene20275.t1 | AT2G30520 | 39.761 | 586 | 296 | 10 | 60 | 630 | 2 | 545 | 1.16e-132 | 400 |
| MS.gene20275.t1 | AT2G30520 | 39.761 | 586 | 296 | 10 | 60 | 630 | 2 | 545 | 1.16e-132 | 400 |
| MS.gene20275.t1 | AT1G30440 | 35.993 | 589 | 323 | 12 | 25 | 566 | 10 | 591 | 3.30e-120 | 372 |
| MS.gene20275.t1 | AT3G08660 | 37.914 | 604 | 298 | 14 | 35 | 626 | 30 | 568 | 8.45e-119 | 365 |
| MS.gene20275.t1 | AT5G13600 | 38.855 | 489 | 269 | 8 | 34 | 500 | 20 | 500 | 3.48e-115 | 357 |
| MS.gene20275.t1 | AT5G64330 | 35.823 | 589 | 274 | 9 | 30 | 516 | 42 | 628 | 2.93e-113 | 354 |
| MS.gene20275.t1 | AT5G64330 | 33.888 | 661 | 311 | 11 | 30 | 569 | 42 | 697 | 6.36e-113 | 355 |
| MS.gene20275.t1 | AT5G03250 | 35.522 | 594 | 330 | 16 | 25 | 577 | 10 | 591 | 1.70e-109 | 342 |
| MS.gene20275.t1 | AT3G08660 | 37.587 | 572 | 281 | 13 | 67 | 626 | 1 | 508 | 2.27e-109 | 339 |
| MS.gene20275.t1 | AT2G47860 | 43.379 | 438 | 211 | 10 | 25 | 442 | 23 | 443 | 5.36e-109 | 335 |
| MS.gene20275.t1 | AT5G66560 | 36.229 | 541 | 272 | 11 | 34 | 508 | 13 | 546 | 1.64e-106 | 336 |
| MS.gene20275.t1 | AT3G44820 | 33.333 | 585 | 339 | 10 | 24 | 563 | 7 | 585 | 1.74e-105 | 333 |
| MS.gene20275.t1 | AT2G47860 | 41.215 | 461 | 211 | 11 | 25 | 442 | 23 | 466 | 1.08e-103 | 323 |
| MS.gene20275.t1 | AT5G64330 | 35.159 | 566 | 263 | 9 | 53 | 516 | 6 | 569 | 2.11e-103 | 326 |
| MS.gene20275.t1 | AT2G47860 | 40.789 | 456 | 227 | 10 | 125 | 551 | 1 | 442 | 1.59e-101 | 319 |
| MS.gene20275.t1 | AT2G47860 | 40.789 | 456 | 227 | 10 | 125 | 551 | 1 | 442 | 1.59e-101 | 319 |
| MS.gene20275.t1 | AT5G66560 | 36.711 | 523 | 258 | 11 | 52 | 508 | 2 | 517 | 2.51e-101 | 322 |
| MS.gene20275.t1 | AT5G66560 | 40.312 | 449 | 239 | 10 | 82 | 508 | 66 | 507 | 5.84e-101 | 321 |
| MS.gene20275.t1 | AT2G14820 | 36.810 | 489 | 276 | 10 | 39 | 507 | 26 | 501 | 1.27e-100 | 320 |
| MS.gene20275.t1 | AT2G14820 | 36.810 | 489 | 276 | 10 | 39 | 507 | 26 | 501 | 1.27e-100 | 320 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT1G67900 | 38.095 | 525 | 251 | 11 | 37 | 508 | 23 | 526 | 3.24e-99 | 316 |
| MS.gene20275.t1 | AT3G50840 | 33.962 | 530 | 318 | 7 | 29 | 551 | 5 | 509 | 3.70e-98 | 311 |
| MS.gene20275.t1 | AT5G10250 | 33.391 | 578 | 313 | 13 | 23 | 562 | 33 | 576 | 4.89e-98 | 313 |
| MS.gene20275.t1 | AT5G10250 | 33.275 | 568 | 312 | 13 | 23 | 562 | 33 | 561 | 6.82e-96 | 307 |
| MS.gene20275.t1 | AT4G31820 | 35.477 | 482 | 275 | 11 | 39 | 508 | 26 | 483 | 3.24e-91 | 293 |
| MS.gene20275.t1 | AT4G37590 | 35.174 | 489 | 270 | 10 | 37 | 509 | 24 | 481 | 4.16e-88 | 286 |
| MS.gene20275.t1 | AT3G50840 | 34.137 | 498 | 296 | 7 | 61 | 551 | 1 | 473 | 1.08e-87 | 283 |
| MS.gene20275.t1 | AT3G50840 | 34.137 | 498 | 296 | 7 | 61 | 551 | 1 | 473 | 1.08e-87 | 283 |
| MS.gene20275.t1 | AT5G67440 | 35.714 | 462 | 283 | 9 | 37 | 493 | 24 | 476 | 2.51e-87 | 283 |
| MS.gene20275.t1 | AT5G67440 | 35.714 | 462 | 283 | 9 | 37 | 493 | 24 | 476 | 2.51e-87 | 283 |
| MS.gene20275.t1 | AT2G23050 | 33.824 | 476 | 269 | 10 | 37 | 506 | 24 | 459 | 3.01e-84 | 273 |
| MS.gene20275.t1 | AT5G47800 | 32.238 | 487 | 295 | 10 | 35 | 508 | 21 | 485 | 4.22e-83 | 272 |
| MS.gene20275.t1 | AT5G47800 | 32.238 | 487 | 295 | 10 | 35 | 508 | 21 | 485 | 4.22e-83 | 272 |
| MS.gene20275.t1 | AT5G47800 | 32.238 | 487 | 295 | 10 | 35 | 508 | 21 | 485 | 4.22e-83 | 272 |
| MS.gene20275.t1 | AT3G08660 | 39.474 | 418 | 219 | 10 | 35 | 446 | 30 | 419 | 1.32e-82 | 266 |
| MS.gene20275.t1 | AT5G67440 | 35.360 | 444 | 273 | 9 | 55 | 493 | 5 | 439 | 1.29e-81 | 267 |
| MS.gene20275.t1 | AT5G47800 | 32.238 | 487 | 295 | 10 | 35 | 508 | 134 | 598 | 1.79e-81 | 270 |
| MS.gene20275.t1 | AT4G31820 | 34.802 | 454 | 260 | 11 | 67 | 508 | 1 | 430 | 5.04e-80 | 263 |
| MS.gene20275.t1 | AT3G26490 | 32.685 | 514 | 287 | 12 | 37 | 504 | 23 | 523 | 1.05e-79 | 264 |
| MS.gene20275.t1 | AT3G26490 | 32.685 | 514 | 287 | 12 | 37 | 504 | 23 | 523 | 1.05e-79 | 264 |
| MS.gene20275.t1 | AT3G26490 | 32.685 | 514 | 287 | 12 | 37 | 504 | 23 | 523 | 1.05e-79 | 264 |
| MS.gene20275.t1 | AT5G03250 | 34.151 | 489 | 276 | 13 | 125 | 577 | 1 | 479 | 5.81e-76 | 251 |
| MS.gene20275.t1 | AT5G66560 | 33.122 | 474 | 245 | 10 | 34 | 442 | 13 | 479 | 1.77e-75 | 249 |
| MS.gene20275.t1 | AT3G26490 | 31.264 | 451 | 256 | 11 | 37 | 446 | 23 | 460 | 5.72e-60 | 209 |
| MS.gene20275.t1 | AT1G52770 | 36.624 | 314 | 165 | 5 | 193 | 494 | 13 | 304 | 2.17e-56 | 197 |
| MS.gene20275.t1 | AT2G23050 | 32.898 | 383 | 216 | 9 | 125 | 506 | 1 | 343 | 7.35e-56 | 194 |
| MS.gene20275.t1 | AT5G48130 | 28.390 | 472 | 287 | 12 | 34 | 491 | 33 | 467 | 4.26e-55 | 198 |
| MS.gene20275.t1 | AT3G15570 | 35.789 | 285 | 152 | 4 | 228 | 494 | 38 | 309 | 5.83e-51 | 183 |
| MS.gene20275.t1 | AT3G19850 | 27.669 | 459 | 276 | 10 | 65 | 491 | 29 | 463 | 1.25e-47 | 176 |
| MS.gene20275.t1 | AT1G50280 | 28.753 | 473 | 293 | 12 | 42 | 487 | 5 | 460 | 3.63e-46 | 171 |
| MS.gene20275.t1 | AT1G50280 | 29.977 | 427 | 261 | 10 | 82 | 487 | 18 | 427 | 1.85e-45 | 169 |
| MS.gene20275.t1 | AT3G22104 | 27.193 | 456 | 272 | 10 | 42 | 478 | 6 | 420 | 5.14e-40 | 154 |
| MS.gene20275.t1 | AT3G03510 | 27.696 | 408 | 239 | 9 | 94 | 496 | 8 | 364 | 4.09e-38 | 147 |
| MS.gene20275.t1 | AT5G17580 | 25.745 | 470 | 307 | 10 | 42 | 498 | 22 | 462 | 1.17e-37 | 147 |
| MS.gene20275.t1 | AT5G17580 | 25.745 | 470 | 307 | 10 | 42 | 498 | 7 | 447 | 1.67e-37 | 147 |
| MS.gene20275.t1 | AT3G22104 | 25.587 | 383 | 228 | 7 | 112 | 478 | 4 | 345 | 9.39e-28 | 117 |
| MS.gene20275.t1 | AT3G22104 | 25.587 | 383 | 228 | 7 | 112 | 478 | 4 | 345 | 9.39e-28 | 117 |
| MS.gene20275.t1 | AT3G22104 | 25.587 | 383 | 228 | 7 | 112 | 478 | 4 | 345 | 9.39e-28 | 117 |
| MS.gene20275.t1 | AT3G49900 | 31.795 | 195 | 112 | 7 | 30 | 213 | 55 | 239 | 1.30e-13 | 74.3 |
| MS.gene20275.t1 | AT3G49900 | 31.250 | 192 | 117 | 6 | 30 | 213 | 55 | 239 | 1.47e-13 | 73.9 |
Find 102 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCCATGTCACTTAAAT+TGG | 0.099646 | 5.1:+8350122 | None:intergenic |
| AGCCTTAGACATCTATTTAA+AGG | 0.193457 | 5.1:-8350978 | MS.gene20275:intron |
| TCTTTCGAGCAGGATATATT+TGG | 0.214701 | 5.1:-8351505 | MS.gene20275:intron |
| TAAAGGAAGATTCTCCAATT+TGG | 0.228988 | 5.1:+8352855 | None:intergenic |
| GACATTGCATTCTTCTCTTT+TGG | 0.249323 | 5.1:+8351406 | None:intergenic |
| GGAAACCACTTTGTCTATAA+TGG | 0.269644 | 5.1:-8351172 | MS.gene20275:CDS |
| GGTTTCCAATTTGAGATTCT+TGG | 0.291899 | 5.1:+8351188 | None:intergenic |
| ATTCCTTCGTATTCATTTAC+CGG | 0.307235 | 5.1:-8351259 | MS.gene20275:CDS |
| TACCTTTAAATAGATGTCTA+AGG | 0.307550 | 5.1:+8350976 | None:intergenic |
| AGTTGCTTGCAGGCTTGATT+TGG | 0.310330 | 5.1:-8351332 | MS.gene20275:CDS |
| TTTAGTTTGGTGTGAATAGA+AGG | 0.321571 | 5.1:+8349937 | None:intergenic |
| CTATAAGAACTCTTTGAAAA+AGG | 0.323564 | 5.1:+8351970 | None:intergenic |
| AATAGCAGAGAAAACAAAAT+TGG | 0.326409 | 5.1:-8352162 | MS.gene20275:CDS |
| TTGATACAACAGTTGCTTGC+AGG | 0.331579 | 5.1:-8351342 | MS.gene20275:CDS |
| GTTGAACTCTCTGATGTTCC+TGG | 0.333752 | 5.1:-8352413 | MS.gene20275:CDS |
| ACCTGAATATACATTTAGTT+TGG | 0.337497 | 5.1:+8349924 | None:intergenic |
| AAAAGAATGGCAATGCAATT+AGG | 0.350908 | 5.1:-8351307 | MS.gene20275:CDS |
| AATTACCAAGAATCTCAAAT+TGG | 0.354888 | 5.1:-8351193 | MS.gene20275:CDS |
| AGTGATGTCAATGTCCAAAT+TGG | 0.359152 | 5.1:-8352869 | MS.gene20275:CDS |
| CTCTCCATGTCACTTAAATT+GGG | 0.374237 | 5.1:+8350123 | None:intergenic |
| TTCTGTCATCTCGAGATATT+CGG | 0.394543 | 5.1:+8352298 | None:intergenic |
| AAAGAAAGTTTGCAGCATAA+TGG | 0.400198 | 5.1:-8350100 | MS.gene20275:CDS |
| AGATTATTCAGTTGGGAACT+TGG | 0.401252 | 5.1:-8352276 | MS.gene20275:CDS |
| TATCCACACTTGGAGACTAA+TGG | 0.409668 | 5.1:+8352482 | None:intergenic |
| AGAGAACTTGGACAACGGTT+TGG | 0.419568 | 5.1:+8350016 | None:intergenic |
| AACAGAGACCAGTTGTTGAT+TGG | 0.421313 | 5.1:-8352025 | MS.gene20275:CDS |
| AGTTCGGTTTCAAAGAAACT+TGG | 0.421844 | 5.1:-8349676 | MS.gene20275:CDS |
| GGGTTTAAACAGTTTGCTAT+TGG | 0.424370 | 5.1:-8351933 | MS.gene20275:CDS |
| AAGAGTTCTTATAGCAATGA+TGG | 0.430446 | 5.1:-8351961 | MS.gene20275:CDS |
| AAATGAAGACCTCAAATTAG+AGG | 0.432193 | 5.1:-8349860 | MS.gene20275:CDS |
| ATCTTCCTTTACTTTACATA+AGG | 0.434540 | 5.1:-8352843 | MS.gene20275:intron |
| CAATCAAAACCTACAGAAGA+TGG | 0.439804 | 5.1:-8351010 | MS.gene20275:CDS |
| ATGACAGAAGATTATTCAGT+TGG | 0.441871 | 5.1:-8352284 | MS.gene20275:CDS |
| TGAACGGGTTGGAAAGCTAA+TGG | 0.443135 | 5.1:-8351113 | MS.gene20275:CDS |
| GAAGGTGAAGCATTTGCAAT+AGG | 0.443580 | 5.1:+8349748 | None:intergenic |
| GATGGTATTGTTACTGCTAA+AGG | 0.444847 | 5.1:-8349628 | MS.gene20275:CDS |
| CAACGGTTTGGACTGGTAAC+CGG | 0.447250 | 5.1:+8350028 | None:intergenic |
| ACTTCACTACCTCTAATTTG+AGG | 0.447292 | 5.1:+8349851 | None:intergenic |
| ACAGAAATCTCTACGAGGTT+TGG | 0.458956 | 5.1:-8351889 | MS.gene20275:intron |
| ATTTGGACATTGACATCACT+TGG | 0.463936 | 5.1:+8352872 | None:intergenic |
| AATTGCTTATATTGCTTGCA+AGG | 0.465206 | 5.1:-8352120 | MS.gene20275:CDS |
| TCAGCCCACCAATCAACAAC+TGG | 0.478880 | 5.1:+8352017 | None:intergenic |
| AGACTTCGCGATGCAATGAA+TGG | 0.480374 | 5.1:-8349979 | MS.gene20275:CDS |
| CACGTTATTCGATGTGGACA+CGG | 0.493140 | 5.1:-8351233 | MS.gene20275:CDS |
| TTCCTTCGTATTCATTTACC+GGG | 0.494561 | 5.1:-8351258 | MS.gene20275:CDS |
| GCTGTTCGTAATAGAGAACT+TGG | 0.494662 | 5.1:+8350004 | None:intergenic |
| CTATACATCCCATCTTCTGT+AGG | 0.497214 | 5.1:+8351001 | None:intergenic |
| ATACCATCCAAACGTGGAAA+AGG | 0.497451 | 5.1:+8349643 | None:intergenic |
| ACCCGTTCAATATCACTTTG+TGG | 0.498785 | 5.1:+8351127 | None:intergenic |
| ACCACAAAGTGATATTGAAC+GGG | 0.498903 | 5.1:-8351128 | MS.gene20275:CDS |
| TGTGCATAGAGCATTAGAAT+AGG | 0.499783 | 5.1:+8351909 | None:intergenic |
| TCTCCAAGTGTGGATACATT+CGG | 0.506959 | 5.1:-8352475 | MS.gene20275:CDS |
| CGAGCAGGATATATTTGGAA+AGG | 0.507201 | 5.1:-8351500 | MS.gene20275:intron |
| CACTACCTTATGTAAAGTAA+AGG | 0.508799 | 5.1:+8352838 | None:intergenic |
| GCTTGATTTGGAGAAAAGAA+TGG | 0.510077 | 5.1:-8351320 | MS.gene20275:CDS |
| ACCAAACTAAATGTATATTC+AGG | 0.522428 | 5.1:-8349925 | MS.gene20275:CDS |
| GAGTGTCGTCGATTCTTGCT+TGG | 0.523000 | 5.1:+8349595 | None:intergenic |
| AGAGACCAGTTGTTGATTGG+TGG | 0.523518 | 5.1:-8352022 | MS.gene20275:CDS |
| GAGCAGGATATATTTGGAAA+GGG | 0.526552 | 5.1:-8351499 | MS.gene20275:intron |
| TGACAGAAGATTATTCAGTT+GGG | 0.532521 | 5.1:-8352283 | MS.gene20275:CDS |
| CATCGCTATGCTTCGATGTG+TGG | 0.533993 | 5.1:-8352321 | MS.gene20275:CDS |
| AACTGATAAATTTCTGTCAG+TGG | 0.538405 | 5.1:+8351069 | None:intergenic |
| CACCACAAAGTGATATTGAA+CGG | 0.544352 | 5.1:-8351129 | MS.gene20275:CDS |
| ACTTGGACAACGGTTTGGAC+TGG | 0.546671 | 5.1:+8350021 | None:intergenic |
| GTAATAGAGAACTTGGACAA+CGG | 0.549721 | 5.1:+8350011 | None:intergenic |
| TTTAACAGTTGATTTAAGTG+TGG | 0.550369 | 5.1:+8349798 | None:intergenic |
| TTTCCGAATGTATCCACACT+TGG | 0.551161 | 5.1:+8352472 | None:intergenic |
| AGAAGTGATAGCGGCTCTGA+CGG | 0.551480 | 5.1:-8352074 | MS.gene20275:CDS |
| GTTCGGTTTCAAAGAAACTT+GGG | 0.553017 | 5.1:-8349675 | MS.gene20275:CDS |
| AGGATATATTTGGAAAGGGA+AGG | 0.553677 | 5.1:-8351495 | MS.gene20275:CDS |
| CGACGACACTCTATTTCCTA+AGG | 0.562175 | 5.1:-8349583 | None:intergenic |
| TTATTCAGTTGGGAACTTGG+TGG | 0.567121 | 5.1:-8352273 | MS.gene20275:CDS |
| CATCACCATTATAGACAAAG+TGG | 0.567160 | 5.1:+8351167 | None:intergenic |
| CAAAGTGATATTGAACGGGT+TGG | 0.567740 | 5.1:-8351124 | MS.gene20275:CDS |
| TATAAATTTCGAGATAAATG+TGG | 0.578053 | 5.1:-8352348 | MS.gene20275:CDS |
| CACATGCAGCTCAAAACGAC+CGG | 0.579581 | 5.1:-8350047 | MS.gene20275:CDS |
| TCGATGTGGACACGGTTCAA+AGG | 0.579585 | 5.1:-8351225 | MS.gene20275:CDS |
| CTTATAGCAATGATGGCTAG+AGG | 0.584871 | 5.1:-8351954 | MS.gene20275:CDS |
| TAAATCAACTGTTAAATCAA+CGG | 0.587019 | 5.1:-8349791 | MS.gene20275:CDS |
| TTATAGCAATGATGGCTAGA+GGG | 0.589083 | 5.1:-8351953 | MS.gene20275:CDS |
| AATCAAAACCTACAGAAGAT+GGG | 0.590751 | 5.1:-8351009 | MS.gene20275:CDS |
| CTAGCAGCAAAATTCTGCTA+CGG | 0.592687 | 5.1:-8352371 | MS.gene20275:CDS |
| TCAAATGCTTCTGCACCACC+AGG | 0.593786 | 5.1:+8352395 | None:intergenic |
| CCATGAAAAGAACAAGTGAC+TGG | 0.597611 | 5.1:-8353040 | MS.gene20275:intron |
| CACATCGAATAACGTGTCCC+CGG | 0.613083 | 5.1:+8351240 | None:intergenic |
| CGGGGACACGTTATTCGATG+TGG | 0.614759 | 5.1:-8351239 | MS.gene20275:CDS |
| TCATCCCAATTTAAGTGACA+TGG | 0.614869 | 5.1:-8350127 | MS.gene20275:CDS |
| TAAATCAACGGTAAAATCAA+CGG | 0.622532 | 5.1:-8349779 | MS.gene20275:CDS |
| TCAGCAGAATGAGAATGAGA+AGG | 0.624756 | 5.1:+8349730 | None:intergenic |
| GAGACCAGTTGTTGATTGGT+GGG | 0.625912 | 5.1:-8352021 | MS.gene20275:CDS |
| CGTTCAATATCACTTTGTGG+TGG | 0.641780 | 5.1:+8351130 | None:intergenic |
| TATCCATTAGTCTCCAAGTG+TGG | 0.642032 | 5.1:-8352485 | MS.gene20275:CDS |
| GTATTGTTACTGCTAAAGGT+AGG | 0.645750 | 5.1:-8349624 | MS.gene20275:CDS |
| GTACTTGCCATGGTGGATCG+TGG | 0.650434 | 5.1:-8353128 | None:intergenic |
| AACATCAGAGAGTTCAACGA+AGG | 0.692508 | 5.1:+8352418 | None:intergenic |
| GAACTCTCTGATGTTCCTGG+TGG | 0.699693 | 5.1:-8352410 | MS.gene20275:CDS |
| GAGTTCAACGAAGGACACGT+CGG | 0.700242 | 5.1:+8352427 | None:intergenic |
| TCATCTGTAAGAAGTGATAG+CGG | 0.715394 | 5.1:-8352083 | MS.gene20275:CDS |
| TCCCCGGTAAATGAATACGA+AGG | 0.717871 | 5.1:+8351256 | None:intergenic |
| GTAACAATACCATCCAAACG+TGG | 0.725647 | 5.1:+8349637 | None:intergenic |
| TCCTTCGTATTCATTTACCG+GGG | 0.730046 | 5.1:-8351257 | MS.gene20275:CDS |
| TATGCACAGAAATCTCTACG+AGG | 0.833179 | 5.1:-8351894 | MS.gene20275:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAATTATTAAGAATTA+AGG | + | chr5.1:8351177-8351196 | None:intergenic | 10.0% |
| !! | CAAAAAAATCTTTATATTGA+CGG | - | chr5.1:8350171-8350190 | MS.gene20275:intron | 15.0% |
| !! | TTAATAAATCATAAAAACGT+AGG | + | chr5.1:8350146-8350165 | None:intergenic | 15.0% |
| !!! | GTTAAAATTTTACAATTTTC+AGG | - | chr5.1:8352553-8352572 | MS.gene20275:intron | 15.0% |
| !! | TAAATCAACTGTTAAATCAA+CGG | - | chr5.1:8352913-8352932 | MS.gene20275:intron | 20.0% |
| !! | TATAAAAGTCTAATCAATGT+TGG | + | chr5.1:8351106-8351125 | None:intergenic | 20.0% |
| !! | TATAAATTTCGAGATAAATG+TGG | - | chr5.1:8350356-8350375 | MS.gene20275:intron | 20.0% |
| !! | TTAACAAAATCAAAAGATCA+TGG | - | chr5.1:8352314-8352333 | MS.gene20275:CDS | 20.0% |
| !!! | CAAATAAATGTATTGTTGTT+TGG | - | chr5.1:8352278-8352297 | MS.gene20275:CDS | 20.0% |
| !!! | TAATTATAGGATTTTTTCTC+AGG | - | chr5.1:8349804-8349823 | MS.gene20275:CDS | 20.0% |
| !!! | TAGTAGTTTTAAAATGGATT+TGG | + | chr5.1:8351914-8351933 | None:intergenic | 20.0% |
| !!! | TCCTATCATTAAATAGATTT+TGG | - | chr5.1:8352064-8352083 | MS.gene20275:CDS | 20.0% |
| !!! | TCGAAAATCTTTTATAAGTT+CGG | - | chr5.1:8353012-8353031 | MS.gene20275:intron | 20.0% |
| !!! | TCTAAGTAGTAGTTTTAAAA+TGG | + | chr5.1:8351920-8351939 | None:intergenic | 20.0% |
| ! | AATAGCAGAGAAAACAAAAT+TGG | - | chr5.1:8350542-8350561 | MS.gene20275:intron | 25.0% |
| ! | AATTAAGCAATACAACTCAT+TGG | + | chr5.1:8349789-8349808 | None:intergenic | 25.0% |
| ! | AATTACCAAGAATCTCAAAT+TGG | - | chr5.1:8351511-8351530 | MS.gene20275:intron | 25.0% |
| ! | ACAATAATACATGTTTGGAA+TGG | + | chr5.1:8352451-8352470 | None:intergenic | 25.0% |
| ! | ACACTACAATAATACATGTT+TGG | + | chr5.1:8352456-8352475 | None:intergenic | 25.0% |
| ! | ACCAAACTAAATGTATATTC+AGG | - | chr5.1:8352779-8352798 | MS.gene20275:intron | 25.0% |
| ! | ACCTGAATATACATTTAGTT+TGG | + | chr5.1:8352783-8352802 | None:intergenic | 25.0% |
| ! | AGCTAAAAATCTTTATCCAA+TGG | - | chr5.1:8352104-8352123 | MS.gene20275:CDS | 25.0% |
| ! | ATCTATTTACATACAGAGAT+AGG | + | chr5.1:8351975-8351994 | None:intergenic | 25.0% |
| ! | ATCTTCCTTTACTTTACATA+AGG | - | chr5.1:8349861-8349880 | MS.gene20275:CDS | 25.0% |
| ! | GAGTTGTATTGCTTAATTAT+AGG | - | chr5.1:8349791-8349810 | MS.gene20275:CDS | 25.0% |
| ! | GCCAAAATCTATTTAATGAT+AGG | + | chr5.1:8352068-8352087 | None:intergenic | 25.0% |
| ! | TAAATCAACGGTAAAATCAA+CGG | - | chr5.1:8352925-8352944 | MS.gene20275:intron | 25.0% |
| ! | TACCTTTAAATAGATGTCTA+AGG | + | chr5.1:8351731-8351750 | None:intergenic | 25.0% |
| ! | TGTAATTATATGTGTAAGTG+CGG | + | chr5.1:8350945-8350964 | None:intergenic | 25.0% |
| ! | TTTGTATAGTAACACATGTT+TGG | + | chr5.1:8352415-8352434 | None:intergenic | 25.0% |
| !! | CTATAAGAACTCTTTGAAAA+AGG | + | chr5.1:8350737-8350756 | None:intergenic | 25.0% |
| !! | GAACTTATAAAAGATTTTCG+AGG | + | chr5.1:8353013-8353032 | None:intergenic | 25.0% |
| !! | TTTAACAGTTGATTTAAGTG+TGG | + | chr5.1:8352909-8352928 | None:intergenic | 25.0% |
| !!! | AATTTTGTTTTCTCTGCTAT+TGG | + | chr5.1:8350543-8350562 | None:intergenic | 25.0% |
| !!! | GTTGTTTTTGGCAAAATTAT+GGG | - | chr5.1:8352363-8352382 | MS.gene20275:CDS | 25.0% |
| !!! | TATTGTTTGCTAACTTTTGT+TGG | - | chr5.1:8349747-8349766 | MS.gene20275:CDS | 25.0% |
| !!! | TGTTGTTTTTGGCAAAATTA+TGG | - | chr5.1:8352362-8352381 | MS.gene20275:CDS | 25.0% |
| AAAAGAATGGCAATGCAATT+AGG | - | chr5.1:8351397-8351416 | MS.gene20275:CDS | 30.0% | |
| AAAGAAAGTTTGCAGCATAA+TGG | - | chr5.1:8352604-8352623 | MS.gene20275:intron | 30.0% | |
| AAATGAAGACCTCAAATTAG+AGG | - | chr5.1:8352844-8352863 | MS.gene20275:CDS | 30.0% | |
| AACTGATAAATTTCTGTCAG+TGG | + | chr5.1:8351638-8351657 | None:intergenic | 30.0% | |
| AAGAGTTCTTATAGCAATGA+TGG | - | chr5.1:8350743-8350762 | MS.gene20275:intron | 30.0% | |
| AATCAAAACCTACAGAAGAT+GGG | - | chr5.1:8351695-8351714 | MS.gene20275:intron | 30.0% | |
| AATTGCTTATATTGCTTGCA+AGG | - | chr5.1:8350584-8350603 | MS.gene20275:intron | 30.0% | |
| ACAAAATCAAAAGATCATGG+TGG | - | chr5.1:8352317-8352336 | MS.gene20275:CDS | 30.0% | |
| AGCCTTAGACATCTATTTAA+AGG | - | chr5.1:8351726-8351745 | MS.gene20275:intron | 30.0% | |
| ATGACAGAAGATTATTCAGT+TGG | - | chr5.1:8350420-8350439 | MS.gene20275:intron | 30.0% | |
| ATTCCTTCGTATTCATTTAC+CGG | - | chr5.1:8351445-8351464 | MS.gene20275:CDS | 30.0% | |
| CACTACCTTATGTAAAGTAA+AGG | + | chr5.1:8349869-8349888 | None:intergenic | 30.0% | |
| GTAATTATATGTGTAAGTGC+GGG | + | chr5.1:8350944-8350963 | None:intergenic | 30.0% | |
| TAAAGGAAGATTCTCCAATT+TGG | + | chr5.1:8349852-8349871 | None:intergenic | 30.0% | |
| TAATGATAGGAAAACACAAG+CGG | + | chr5.1:8352055-8352074 | None:intergenic | 30.0% | |
| TGACAGAAGATTATTCAGTT+GGG | - | chr5.1:8350421-8350440 | MS.gene20275:intron | 30.0% | |
| TTGAAAGCAAGATGTATAAG+TGG | - | chr5.1:8350065-8350084 | MS.gene20275:CDS | 30.0% | |
| ! | AAGACAAGAGCATGAAAAAA+GGG | - | chr5.1:8351246-8351265 | MS.gene20275:CDS | 30.0% |
| !! | AAGCTCTAGAGAATTAGTTT+AGG | + | chr5.1:8352231-8352250 | None:intergenic | 30.0% |
| !! | CATTCTTCTCTTTTGGTAAT+AGG | + | chr5.1:8351294-8351313 | None:intergenic | 30.0% |
| !! | TTTAGTTTGGTGTGAATAGA+AGG | + | chr5.1:8352770-8352789 | None:intergenic | 30.0% |
| !!! | ATTTTTTCTTTCTTTCGAGC+AGG | - | chr5.1:8351189-8351208 | MS.gene20275:CDS | 30.0% |
| !!! | CTCTATCTTTTTTTAGAGAG+AGG | + | chr5.1:8350846-8350865 | None:intergenic | 30.0% |
| !!! | TGTGAAGTTTGTGTTGTTTT+TGG | - | chr5.1:8352351-8352370 | MS.gene20275:CDS | 30.0% |
| ACCACAAAGTGATATTGAAC+GGG | - | chr5.1:8351576-8351595 | MS.gene20275:intron | 35.0% | |
| ACTTCACTACCTCTAATTTG+AGG | + | chr5.1:8352856-8352875 | None:intergenic | 35.0% | |
| AGATTATTCAGTTGGGAACT+TGG | - | chr5.1:8350428-8350447 | MS.gene20275:intron | 35.0% | |
| AGGATATATTTGGAAAGGGA+AGG | - | chr5.1:8351209-8351228 | MS.gene20275:CDS | 35.0% | |
| AGTGATGTCAATGTCCAAAT+TGG | - | chr5.1:8349835-8349854 | MS.gene20275:CDS | 35.0% | |
| AGTTCGGTTTCAAAGAAACT+TGG | - | chr5.1:8353028-8353047 | MS.gene20275:intron | 35.0% | |
| ATTTGGACATTGACATCACT+TGG | + | chr5.1:8349835-8349854 | None:intergenic | 35.0% | |
| CAATCAAAACCTACAGAAGA+TGG | - | chr5.1:8351694-8351713 | MS.gene20275:intron | 35.0% | |
| CACCACAAAGTGATATTGAA+CGG | - | chr5.1:8351575-8351594 | MS.gene20275:intron | 35.0% | |
| CATCACCATTATAGACAAAG+TGG | + | chr5.1:8351540-8351559 | None:intergenic | 35.0% | |
| GAGCAGGATATATTTGGAAA+GGG | - | chr5.1:8351205-8351224 | MS.gene20275:CDS | 35.0% | |
| GATGGTATTGTTACTGCTAA+AGG | - | chr5.1:8353076-8353095 | MS.gene20275:CDS | 35.0% | |
| GGAAACCACTTTGTCTATAA+TGG | - | chr5.1:8351532-8351551 | MS.gene20275:intron | 35.0% | |
| GTAATAGAGAACTTGGACAA+CGG | + | chr5.1:8352696-8352715 | None:intergenic | 35.0% | |
| GTAGCACTAAAAACAATTGC+AGG | - | chr5.1:8350480-8350499 | MS.gene20275:intron | 35.0% | |
| GTATTGTTACTGCTAAAGGT+AGG | - | chr5.1:8353080-8353099 | MS.gene20275:CDS | 35.0% | |
| GTTCGGTTTCAAAGAAACTT+GGG | - | chr5.1:8353029-8353048 | MS.gene20275:intron | 35.0% | |
| TCATCCCAATTTAAGTGACA+TGG | - | chr5.1:8352577-8352596 | MS.gene20275:intron | 35.0% | |
| TCATCTGTAAGAAGTGATAG+CGG | - | chr5.1:8350621-8350640 | MS.gene20275:intron | 35.0% | |
| TCTTTCGAGCAGGATATATT+TGG | - | chr5.1:8351199-8351218 | MS.gene20275:CDS | 35.0% | |
| TGTTCATATCTGTGCTTCAT+AGG | - | chr5.1:8350999-8351018 | MS.gene20275:CDS | 35.0% | |
| TTATAGCAATGATGGCTAGA+GGG | - | chr5.1:8350751-8350770 | MS.gene20275:intron | 35.0% | |
| TTCCTTCGTATTCATTTACC+GGG | - | chr5.1:8351446-8351465 | MS.gene20275:CDS | 35.0% | |
| TTCTGTCATCTCGAGATATT+CGG | + | chr5.1:8350409-8350428 | None:intergenic | 35.0% | |
| ! | CAAGACAAGAGCATGAAAAA+AGG | - | chr5.1:8351245-8351264 | MS.gene20275:CDS | 35.0% |
| ! | CTCTCCATGTCACTTAAATT+GGG | + | chr5.1:8352584-8352603 | None:intergenic | 35.0% |
| ! | CTTCTTTTCTTTCGCAAACA+AGG | + | chr5.1:8351034-8351053 | None:intergenic | 35.0% |
| ! | GACATTGCATTCTTCTCTTT+TGG | + | chr5.1:8351301-8351320 | None:intergenic | 35.0% |
| ! | GGTTTCCAATTTGAGATTCT+TGG | + | chr5.1:8351519-8351538 | None:intergenic | 35.0% |
| ! | TCTCTCCATGTCACTTAAAT+TGG | + | chr5.1:8352585-8352604 | None:intergenic | 35.0% |
| ! | TGTGCATAGAGCATTAGAAT+AGG | + | chr5.1:8350798-8350817 | None:intergenic | 35.0% |
| ! | TTTTCTCTGCTATTGGAAGA+AGG | + | chr5.1:8350536-8350555 | None:intergenic | 35.0% |
| !! | ATAAAAGATTTTCGAGGCAG+TGG | + | chr5.1:8353007-8353026 | None:intergenic | 35.0% |
| !! | GCTTGATTTGGAGAAAAGAA+TGG | - | chr5.1:8351384-8351403 | MS.gene20275:CDS | 35.0% |
| !! | GGGTTTAAACAGTTTGCTAT+TGG | - | chr5.1:8350771-8350790 | MS.gene20275:intron | 35.0% |
| !!! | CTTTTTTCATGCTCTTGTCT+TGG | + | chr5.1:8351247-8351266 | None:intergenic | 35.0% |
| !!! | TCTGTAGGTTTTGATTGTTC+AGG | + | chr5.1:8351691-8351710 | None:intergenic | 35.0% |
| AACAGAGACCAGTTGTTGAT+TGG | - | chr5.1:8350679-8350698 | MS.gene20275:intron | 40.0% | |
| AACATCAGAGAGTTCAACGA+AGG | + | chr5.1:8350289-8350308 | None:intergenic | 40.0% | |
| ACAGAAATCTCTACGAGGTT+TGG | - | chr5.1:8350815-8350834 | MS.gene20275:intron | 40.0% | |
| ACCCGTTCAATATCACTTTG+TGG | + | chr5.1:8351580-8351599 | None:intergenic | 40.0% | |
| ATACCATCCAAACGTGGAAA+AGG | + | chr5.1:8353064-8353083 | None:intergenic | 40.0% | |
| ATGCAATCACAGATCTCAGT+CGG | - | chr5.1:8351856-8351875 | MS.gene20275:intron | 40.0% | |
| CAAAGTGATATTGAACGGGT+TGG | - | chr5.1:8351580-8351599 | MS.gene20275:intron | 40.0% | |
| CCATGAAAAGAACAAGTGAC+TGG | - | chr5.1:8349664-8349683 | MS.gene20275:CDS | 40.0% | |
| CGAGCAGGATATATTTGGAA+AGG | - | chr5.1:8351204-8351223 | MS.gene20275:CDS | 40.0% | |
| CGTTCAATATCACTTTGTGG+TGG | + | chr5.1:8351577-8351596 | None:intergenic | 40.0% | |
| CTAGCAGCAAAATTCTGCTA+CGG | - | chr5.1:8350333-8350352 | MS.gene20275:intron | 40.0% | |
| CTATACATCCCATCTTCTGT+AGG | + | chr5.1:8351706-8351725 | None:intergenic | 40.0% | |
| CTCGACCATTGAATGAAGAT+CGG | - | chr5.1:8352028-8352047 | MS.gene20275:CDS | 40.0% | |
| CTTATAGCAATGATGGCTAG+AGG | - | chr5.1:8350750-8350769 | MS.gene20275:intron | 40.0% | |
| GATCTCAGTCGGATGAAAAT+TGG | - | chr5.1:8351867-8351886 | MS.gene20275:intron | 40.0% | |
| GCAATGACTATGAGAGGATT+CGG | - | chr5.1:8352142-8352161 | MS.gene20275:CDS | 40.0% | |
| GCTGTTCGTAATAGAGAACT+TGG | + | chr5.1:8352703-8352722 | None:intergenic | 40.0% | |
| GTAACAATACCATCCAAACG+TGG | + | chr5.1:8353070-8353089 | None:intergenic | 40.0% | |
| GTAAGTGCAATGACTATGAG+AGG | - | chr5.1:8352136-8352155 | MS.gene20275:CDS | 40.0% | |
| TATCCACACTTGGAGACTAA+TGG | + | chr5.1:8350225-8350244 | None:intergenic | 40.0% | |
| TATGCACAGAAATCTCTACG+AGG | - | chr5.1:8350810-8350829 | MS.gene20275:intron | 40.0% | |
| TCAGCAGAATGAGAATGAGA+AGG | + | chr5.1:8352977-8352996 | None:intergenic | 40.0% | |
| TCCTTCGTATTCATTTACCG+GGG | - | chr5.1:8351447-8351466 | MS.gene20275:CDS | 40.0% | |
| TCTCCAAGTGTGGATACATT+CGG | - | chr5.1:8350229-8350248 | MS.gene20275:intron | 40.0% | |
| TTATTCAGTTGGGAACTTGG+TGG | - | chr5.1:8350431-8350450 | MS.gene20275:intron | 40.0% | |
| TTGATACAACAGTTGCTTGC+AGG | - | chr5.1:8351362-8351381 | MS.gene20275:CDS | 40.0% | |
| TTTCCGAATGTATCCACACT+TGG | + | chr5.1:8350235-8350254 | None:intergenic | 40.0% | |
| ! | CCAGTCACTTGTTCTTTTCA+TGG | + | chr5.1:8349667-8349686 | None:intergenic | 40.0% |
| ! | GAAGGTGAAGCATTTGCAAT+AGG | + | chr5.1:8352959-8352978 | None:intergenic | 40.0% |
| ! | TATCCATTAGTCTCCAAGTG+TGG | - | chr5.1:8350219-8350238 | MS.gene20275:intron | 40.0% |
| !! | CATAGAGGAAGTGTAGCTTT+TGG | + | chr5.1:8351827-8351846 | None:intergenic | 40.0% |
| AGACTTCGCGATGCAATGAA+TGG | - | chr5.1:8352725-8352744 | MS.gene20275:intron | 45.0% | |
| AGAGAACTTGGACAACGGTT+TGG | + | chr5.1:8352691-8352710 | None:intergenic | 45.0% | |
| AGTTGCTTGCAGGCTTGATT+TGG | - | chr5.1:8351372-8351391 | MS.gene20275:CDS | 45.0% | |
| CACGTTATTCGATGTGGACA+CGG | - | chr5.1:8351471-8351490 | MS.gene20275:CDS | 45.0% | |
| CACTTACGAATCTCGACCAT+TGG | + | chr5.1:8352123-8352142 | None:intergenic | 45.0% | |
| GCAACAGACACAACTTGTGT+CGG | + | chr5.1:8350922-8350941 | None:intergenic | 45.0% | |
| GTTGAACTCTCTGATGTTCC+TGG | - | chr5.1:8350291-8350310 | MS.gene20275:intron | 45.0% | |
| TCCCCGGTAAATGAATACGA+AGG | + | chr5.1:8351451-8351470 | None:intergenic | 45.0% | |
| TGTTATGTTGTTCCCACGAG+AGG | + | chr5.1:8352171-8352190 | None:intergenic | 45.0% | |
| TTGCATGACTGCATGCATAG+AGG | + | chr5.1:8351842-8351861 | None:intergenic | 45.0% | |
| ! | AGAGACCAGTTGTTGATTGG+TGG | - | chr5.1:8350682-8350701 | MS.gene20275:intron | 45.0% |
| ! | GAGACCAGTTGTTGATTGGT+GGG | - | chr5.1:8350683-8350702 | MS.gene20275:intron | 45.0% |
| ! | GCTTTCTCCTTTTCCACGTT+TGG | - | chr5.1:8353054-8353073 | MS.gene20275:CDS | 45.0% |
| ! | TCTCCTTTTCCACGTTTGGA+TGG | - | chr5.1:8353058-8353077 | MS.gene20275:CDS | 45.0% |
| !! | AAAGATTTTCGAGGCAGTGG+AGG | + | chr5.1:8353004-8353023 | None:intergenic | 45.0% |
| !! | TGAACGGGTTGGAAAGCTAA+TGG | - | chr5.1:8351591-8351610 | MS.gene20275:intron | 45.0% |
| !!! | TTTAAATAGATTTTTTTAAA+AGG | + | chr5.1:8351784-8351803 | None:intergenic | 5.0% |
| !!! | TTTTAAAAAAATCTATTTAA+AGG | - | chr5.1:8351783-8351802 | MS.gene20275:intron | 5.0% |
| AGGATTCGGATACCTCTCGT+GGG | - | chr5.1:8352156-8352175 | MS.gene20275:CDS | 50.0% | |
| CACATCGAATAACGTGTCCC+CGG | + | chr5.1:8351467-8351486 | None:intergenic | 50.0% | |
| CACATGCAGCTCAAAACGAC+CGG | - | chr5.1:8352657-8352676 | MS.gene20275:intron | 50.0% | |
| CATCGCTATGCTTCGATGTG+TGG | - | chr5.1:8350383-8350402 | MS.gene20275:intron | 50.0% | |
| GAACTCTCTGATGTTCCTGG+TGG | - | chr5.1:8350294-8350313 | MS.gene20275:intron | 50.0% | |
| GAGTTCAACGAAGGACACGT+CGG | + | chr5.1:8350280-8350299 | None:intergenic | 50.0% | |
| GCGGTCCGATCTTCATTCAA+TGG | + | chr5.1:8352036-8352055 | None:intergenic | 50.0% | |
| TCAAATGCTTCTGCACCACC+AGG | + | chr5.1:8350312-8350331 | None:intergenic | 50.0% | |
| TCAGCCCACCAATCAACAAC+TGG | + | chr5.1:8350690-8350709 | None:intergenic | 50.0% | |
| TCGATGTGGACACGGTTCAA+AGG | - | chr5.1:8351479-8351498 | MS.gene20275:CDS | 50.0% | |
| ! | ACTTGGACAACGGTTTGGAC+TGG | + | chr5.1:8352686-8352705 | None:intergenic | 50.0% |
| !! | AGAAGTGATAGCGGCTCTGA+CGG | - | chr5.1:8350630-8350649 | MS.gene20275:intron | 50.0% |
| !! | CAACGGTTTGGACTGGTAAC+CGG | + | chr5.1:8352679-8352698 | None:intergenic | 50.0% |
| !! | GAGTGTCGTCGATTCTTGCT+TGG | + | chr5.1:8353112-8353131 | None:intergenic | 50.0% |
| CGGGGACACGTTATTCGATG+TGG | - | chr5.1:8351465-8351484 | MS.gene20275:CDS | 55.0% | |
| GAGGATTCGGATACCTCTCG+TGG | - | chr5.1:8352155-8352174 | MS.gene20275:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8349585 | 8353141 | 8349585 | ID=MS.gene20275 |
| chr5.1 | mRNA | 8349585 | 8353141 | 8349585 | ID=MS.gene20275.t1;Parent=MS.gene20275 |
| chr5.1 | exon | 8353041 | 8353141 | 8353041 | ID=MS.gene20275.t1.exon1;Parent=MS.gene20275.t1 |
| chr5.1 | CDS | 8353041 | 8353141 | 8353041 | ID=cds.MS.gene20275.t1;Parent=MS.gene20275.t1 |
| chr5.1 | exon | 8352844 | 8352913 | 8352844 | ID=MS.gene20275.t1.exon2;Parent=MS.gene20275.t1 |
| chr5.1 | CDS | 8352844 | 8352913 | 8352844 | ID=cds.MS.gene20275.t1;Parent=MS.gene20275.t1 |
| chr5.1 | exon | 8351890 | 8352507 | 8351890 | ID=MS.gene20275.t1.exon3;Parent=MS.gene20275.t1 |
| chr5.1 | CDS | 8351890 | 8352507 | 8351890 | ID=cds.MS.gene20275.t1;Parent=MS.gene20275.t1 |
| chr5.1 | exon | 8350979 | 8351515 | 8350979 | ID=MS.gene20275.t1.exon4;Parent=MS.gene20275.t1 |
| chr5.1 | CDS | 8350979 | 8351515 | 8350979 | ID=cds.MS.gene20275.t1;Parent=MS.gene20275.t1 |
| chr5.1 | exon | 8349585 | 8350151 | 8349585 | ID=MS.gene20275.t1.exon5;Parent=MS.gene20275.t1 |
| chr5.1 | CDS | 8349585 | 8350151 | 8349585 | ID=cds.MS.gene20275.t1;Parent=MS.gene20275.t1 |
| Gene Sequence |
| Protein sequence |
