Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84154.t1 | AES65208.1 | 98.5 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 1.00E-104 | 389.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84154.t1 | Q84RQ7 | 69.6 | 204 | 59 | 2 | 1 | 203 | 35 | 236 | 6.9e-70 | 265.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84154.t1 | G7IN05 | 98.5 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 7.2e-105 | 389.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene84154 | 0.839787 | 1.29E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene84154 | 0.817889 | 2.61E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene84154 | 0.811893 | 5.57E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene84154 | 0.841486 | 4.62E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene84154 | 0.864499 | 1.16E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene84154 | 0.841673 | 4.12E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene84154 | 0.842817 | 2.05E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene84154 | 0.836001 | 1.21E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene84154 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene84154 | 0.817276 | 3.59E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene84154 | 0.815449 | 9.19E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene84154 | 0.867532 | 1.28E-65 | -1.69E-46 |
| MS.gene050076 | MS.gene84154 | 0.863323 | 2.70E-64 | -1.69E-46 |
| MS.gene050301 | MS.gene84154 | 0.839084 | 1.96E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene84154 | 0.829856 | 4.07E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene84154 | 0.87346 | 1.44E-67 | -1.69E-46 |
| MS.gene050464 | MS.gene84154 | 0.828801 | 7.35E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene84154 | 0.807625 | 4.61E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene84154 | 0.866116 | 3.61E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene84154 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene84154 | 0.865557 | 5.42E-65 | -1.69E-46 |
| MS.gene050670 | MS.gene84154 | 0.893217 | 7.72E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene84154 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene84154 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene84154 | 0.817048 | 4.04E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene84154 | 0.829694 | 4.46E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene84154 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene050812 | MS.gene84154 | 0.851241 | 1.01E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene84154 | 0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene84154 | 0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene84154 | 0.891606 | 3.41E-74 | -1.69E-46 |
| MS.gene051228 | MS.gene84154 | 0.828943 | 6.79E-55 | -1.69E-46 |
| MS.gene051360 | MS.gene84154 | 0.805005 | 1.64E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene84154 | 0.86856 | 5.97E-66 | -1.69E-46 |
| MS.gene051471 | MS.gene84154 | 0.808577 | 2.89E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene84154 | 0.822735 | 2.02E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene84154 | 0.814142 | 1.79E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene84154 | 0.808531 | 2.96E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene84154 | 0.856773 | 2.56E-62 | -1.69E-46 |
| MS.gene051734 | MS.gene84154 | 0.806645 | 7.44E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene84154 | 0.809545 | 1.80E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene84154 | 0.840562 | 8.07E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene84154 | 0.805741 | 1.15E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene84154 | 0.832145 | 1.12E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene84154 | 0.806741 | 7.10E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene84154 | 0.883399 | 4.64E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene84154 | 0.820146 | 8.00E-53 | -1.69E-46 |
| MS.gene052290 | MS.gene84154 | 0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene84154 | 0.88192 | 1.61E-70 | -1.69E-46 |
| MS.gene052326 | MS.gene84154 | 0.809449 | 1.88E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene84154 | 0.846498 | 2.09E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene84154 | 0.847698 | 9.81E-60 | -1.69E-46 |
| MS.gene052414 | MS.gene84154 | 0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene84154 | 0.869701 | 2.54E-66 | -1.69E-46 |
| MS.gene052481 | MS.gene84154 | 0.815417 | 9.35E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene84154 | 0.855092 | 7.95E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene84154 | 0.850534 | 1.60E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene84154 | 0.808536 | 2.95E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene84154 | 0.820985 | 5.13E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene84154 | 0.819499 | 1.12E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene84154 | 0.810231 | 1.28E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene84154 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene84154 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene84154 | 0.870783 | 1.12E-66 | -1.69E-46 |
| MS.gene053104 | MS.gene84154 | 0.878814 | 2.07E-69 | -1.69E-46 |
| MS.gene053107 | MS.gene84154 | 0.826942 | 2.06E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene84154 | 0.832874 | 7.37E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene84154 | 0.847923 | 8.51E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene84154 | 0.809978 | 1.45E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene84154 | 0.859403 | 4.24E-63 | -1.69E-46 |
| MS.gene053384 | MS.gene84154 | 0.803585 | 3.25E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene84154 | 0.842653 | 2.27E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene84154 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene84154 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene053579 | MS.gene84154 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene84154 | 0.822918 | 1.83E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene84154 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene84154 | 0.812386 | 4.35E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene84154 | 0.80214 | 6.46E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene84154 | 0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene84154 | 0.844914 | 5.63E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene84154 | 0.80681 | 6.87E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene84154 | 0.84876 | 4.99E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene84154 | 0.826022 | 3.41E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene84154 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene84154 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene84154 | 0.83462 | 2.70E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene84154 | 0.831162 | 1.95E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene84154 | 0.835098 | 2.05E-56 | -1.69E-46 |
| MS.gene054955 | MS.gene84154 | 0.855966 | 4.42E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene84154 | 0.878407 | 2.88E-69 | -1.69E-46 |
| MS.gene055116 | MS.gene84154 | 0.849403 | 3.31E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene84154 | 0.845546 | 3.80E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene84154 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene84154 | 0.866878 | 2.07E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene84154 | 0.833427 | 5.37E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene84154 | 0.808324 | 3.28E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene84154 | 0.826647 | 2.42E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene84154 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene84154 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene84154 | 0.817377 | 3.40E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene84154 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene84154 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene055533 | MS.gene84154 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene84154 | 0.806898 | 6.58E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene84154 | 0.838707 | 2.45E-57 | -1.69E-46 |
| MS.gene055647 | MS.gene84154 | 0.809498 | 1.84E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene84154 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene84154 | 0.804369 | 2.23E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene84154 | 0.874287 | 7.60E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene84154 | 0.849865 | 2.46E-60 | -1.69E-46 |
| MS.gene05602 | MS.gene84154 | 0.811069 | 8.42E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene84154 | 0.816702 | 4.83E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene84154 | 0.891896 | 2.61E-74 | -1.69E-46 |
| MS.gene056410 | MS.gene84154 | 0.842819 | 2.05E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene84154 | 0.824459 | 7.98E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene84154 | 0.868725 | 5.27E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene84154 | 0.862888 | 3.68E-64 | -1.69E-46 |
| MS.gene056612 | MS.gene84154 | 0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene84154 | 0.831514 | 1.60E-55 | -1.69E-46 |
| MS.gene056719 | MS.gene84154 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene84154 | 0.839476 | 1.55E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene84154 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene84154 | 0.859294 | 4.57E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene84154 | 0.812496 | 4.12E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene84154 | 0.845251 | 4.56E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene84154 | 0.836424 | 9.43E-57 | -1.69E-46 |
| MS.gene057124 | MS.gene84154 | 0.85095 | 1.22E-60 | -1.69E-46 |
| MS.gene057129 | MS.gene84154 | 0.841983 | 3.41E-58 | -1.69E-46 |
| MS.gene057146 | MS.gene84154 | 0.863863 | 1.84E-64 | -1.69E-46 |
| MS.gene057331 | MS.gene84154 | 0.814808 | 1.28E-51 | -1.69E-46 |
| MS.gene05735 | MS.gene84154 | 0.853747 | 1.95E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene84154 | 0.839862 | 1.23E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene84154 | 0.828992 | 6.60E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene84154 | 0.804144 | 2.49E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene84154 | 0.834057 | 3.73E-56 | -1.69E-46 |
| MS.gene057734 | MS.gene84154 | 0.800953 | 1.13E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene84154 | 0.845349 | 4.29E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene84154 | 0.858816 | 6.35E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene84154 | 0.835754 | 1.40E-56 | -1.69E-46 |
| MS.gene057927 | MS.gene84154 | 0.876228 | 1.65E-68 | -1.69E-46 |
| MS.gene058002 | MS.gene84154 | 0.836015 | 1.20E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene84154 | 0.829606 | 4.69E-55 | -1.69E-46 |
| MS.gene058007 | MS.gene84154 | 0.82666 | 2.40E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene84154 | 0.864431 | 1.22E-64 | -1.69E-46 |
| MS.gene058082 | MS.gene84154 | 0.841423 | 4.79E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene84154 | 0.832778 | 7.79E-56 | -1.69E-46 |
| MS.gene058233 | MS.gene84154 | 0.855638 | 5.52E-62 | -1.69E-46 |
| MS.gene058293 | MS.gene84154 | 0.88945 | 2.40E-73 | -1.69E-46 |
| MS.gene058323 | MS.gene84154 | 0.834466 | 2.95E-56 | -1.69E-46 |
| MS.gene058365 | MS.gene84154 | 0.864541 | 1.13E-64 | -1.69E-46 |
| MS.gene058376 | MS.gene84154 | 0.813359 | 2.66E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene84154 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene058444 | MS.gene84154 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene84154 | 0.875456 | 3.04E-68 | -1.69E-46 |
| MS.gene058700 | MS.gene84154 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene058748 | MS.gene84154 | 0.807219 | 5.62E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene84154 | 0.81606 | 6.72E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene84154 | 0.851945 | 6.38E-61 | -1.69E-46 |
| MS.gene058948 | MS.gene84154 | 0.815815 | 7.62E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene84154 | 0.809241 | 2.09E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene84154 | 0.858463 | 8.10E-63 | -1.69E-46 |
| MS.gene059294 | MS.gene84154 | 0.804887 | 1.74E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene84154 | 0.874597 | 5.96E-68 | -1.69E-46 |
| MS.gene059366 | MS.gene84154 | 0.853767 | 1.92E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene84154 | 0.814527 | 1.47E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene84154 | 0.838301 | 3.12E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene84154 | 0.82675 | 2.29E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene84154 | 0.84153 | 4.49E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene84154 | 0.862126 | 6.32E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene84154 | 0.839084 | 1.96E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene84154 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene84154 | 0.89879 | 3.75E-77 | -1.69E-46 |
| MS.gene059688 | MS.gene84154 | 0.885222 | 9.79E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene84154 | 0.883464 | 4.39E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene84154 | 0.885816 | 5.86E-72 | -1.69E-46 |
| MS.gene059708 | MS.gene84154 | 0.825673 | 4.12E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene84154 | 0.837854 | 4.07E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene84154 | 0.83024 | 3.28E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene84154 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene84154 | 0.825085 | 5.68E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene84154 | 0.808024 | 3.79E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene84154 | 0.868359 | 6.92E-66 | -1.69E-46 |
| MS.gene060193 | MS.gene84154 | 0.837189 | 6.02E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene84154 | 0.816312 | 5.90E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene84154 | 0.849346 | 3.43E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene84154 | 0.821785 | 3.36E-53 | -1.69E-46 |
| MS.gene060496 | MS.gene84154 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene060569 | MS.gene84154 | 0.802276 | 6.06E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene84154 | 0.895175 | 1.23E-75 | -1.69E-46 |
| MS.gene060818 | MS.gene84154 | 0.859906 | 2.99E-63 | -1.69E-46 |
| MS.gene060835 | MS.gene84154 | 0.872301 | 3.53E-67 | -1.69E-46 |
| MS.gene060837 | MS.gene84154 | 0.851633 | 7.82E-61 | -1.69E-46 |
| MS.gene06090 | MS.gene84154 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene84154 | 0.843655 | 1.23E-58 | -1.69E-46 |
| MS.gene061041 | MS.gene84154 | 0.888825 | 4.18E-73 | -1.69E-46 |
| MS.gene061049 | MS.gene84154 | 0.851995 | 6.17E-61 | -1.69E-46 |
| MS.gene061051 | MS.gene84154 | -0.872229 | 3.73E-67 | -1.69E-46 |
| MS.gene061154 | MS.gene84154 | 0.866754 | 2.26E-65 | -1.69E-46 |
| MS.gene061200 | MS.gene84154 | 0.85407 | 1.57E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84154.t1 | MTR_2g036690 | 98.522 | 203 | 3 | 0 | 1 | 203 | 40 | 242 | 1.18e-144 | 402 |
| MS.gene84154.t1 | MTR_2g036690 | 98.582 | 141 | 2 | 0 | 1 | 141 | 40 | 180 | 2.92e-98 | 283 |
| MS.gene84154.t1 | MTR_2g005900 | 71.341 | 164 | 47 | 0 | 39 | 202 | 60 | 223 | 1.83e-78 | 234 |
| MS.gene84154.t1 | MTR_2g005900 | 39.130 | 92 | 51 | 2 | 113 | 200 | 53 | 143 | 4.99e-11 | 60.1 |
| MS.gene84154.t1 | MTR_7g109850 | 37.888 | 161 | 98 | 2 | 32 | 191 | 49 | 208 | 9.98e-25 | 96.7 |
| MS.gene84154.t1 | MTR_8g038785 | 44.318 | 88 | 49 | 0 | 31 | 118 | 48 | 135 | 2.77e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84154.t1 | AT4G25910 | 69.608 | 204 | 59 | 2 | 1 | 203 | 35 | 236 | 7.85e-94 | 273 |
| MS.gene84154.t1 | AT5G49940 | 70.225 | 178 | 49 | 1 | 25 | 202 | 62 | 235 | 2.84e-81 | 242 |
| MS.gene84154.t1 | AT5G49940 | 65.812 | 117 | 36 | 1 | 25 | 141 | 62 | 174 | 1.72e-44 | 146 |
| MS.gene84154.t1 | AT5G49940 | 45.946 | 74 | 35 | 2 | 133 | 202 | 85 | 157 | 1.15e-11 | 61.2 |
| MS.gene84154.t1 | AT4G01940 | 36.649 | 191 | 115 | 5 | 2 | 191 | 38 | 223 | 2.72e-25 | 98.6 |
Find 35 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAACCTGCTTTGTTTCT+TGG | 0.155090 | 2.3:-52020423 | None:intergenic |
| TGTTCAACCTCCAAGATTTC+TGG | 0.161640 | 2.3:-52021116 | None:intergenic |
| GAAATTAGACCATATCTTAT+TGG | 0.195631 | 2.3:+52021549 | MS.gene84154:CDS |
| AGACCATATCTTATTGGAAC+TGG | 0.334639 | 2.3:+52021555 | MS.gene84154:CDS |
| AGAAAATGTAGAGAAAGTTT+TGG | 0.348094 | 2.3:+52020932 | MS.gene84154:CDS |
| CACAAGCTCCTTGTAGTTTG+AGG | 0.369342 | 2.3:-52021028 | None:intergenic |
| CGATAAGATTCCAGAAATCT+TGG | 0.378676 | 2.3:+52021106 | MS.gene84154:CDS |
| ATGATTACATCATTAAAGTT+CGG | 0.426909 | 2.3:+52021607 | MS.gene84154:CDS |
| CGGCTAAGTGGACCGGCAGC+AGG | 0.440486 | 2.3:+52021627 | MS.gene84154:CDS |
| AGCTGCACAGCAGCAATAGA+AGG | 0.442231 | 2.3:-52021699 | None:intergenic |
| TGAAGTAAGGCCTGGTTTGA+TGG | 0.459751 | 2.3:+52020956 | MS.gene84154:CDS |
| ATCATTAAAGTTCGGCTAAG+TGG | 0.471253 | 2.3:+52021615 | MS.gene84154:CDS |
| CTCAACCATGACATTGAAGA+TGG | 0.471530 | 2.3:+52021064 | MS.gene84154:CDS |
| TTCTTGAAGAATCTTATAGC+AGG | 0.514284 | 2.3:+52020309 | None:intergenic |
| CTCAAACTACAAGGAGCTTG+TGG | 0.520248 | 2.3:+52021029 | MS.gene84154:CDS |
| GACCATATCTTATTGGAACT+GGG | 0.523059 | 2.3:+52021556 | MS.gene84154:CDS |
| GATCCCCATCTTCAATGTCA+TGG | 0.540108 | 2.3:-52021069 | None:intergenic |
| CCTCCATCAGCCATCAAACC+AGG | 0.556402 | 2.3:-52020966 | None:intergenic |
| GTTGTTATCCTCAAACTACA+AGG | 0.559144 | 2.3:+52021020 | MS.gene84154:CDS |
| TAAAGTTCGGCTAAGTGGAC+CGG | 0.560824 | 2.3:+52021620 | MS.gene84154:CDS |
| GTGGCATTGCATGAGATAGA+TGG | 0.565280 | 2.3:+52020993 | MS.gene84154:CDS |
| TTCAATGTCATGGTTGAGCT+AGG | 0.567639 | 2.3:-52021059 | None:intergenic |
| TCAACCATGACATTGAAGAT+GGG | 0.574515 | 2.3:+52021065 | MS.gene84154:CDS |
| CAGATACTAGATACTGAGAC+TGG | 0.580123 | 2.3:+52021137 | MS.gene84154:CDS |
| TAAGATTCCAGAAATCTTGG+AGG | 0.581548 | 2.3:+52021109 | MS.gene84154:CDS |
| CTGGTTTGATGGCTGATGGA+GGG | 0.590897 | 2.3:+52020967 | MS.gene84154:CDS |
| CCTGGTTTGATGGCTGATGG+AGG | 0.592266 | 2.3:+52020966 | MS.gene84154:CDS |
| GTCAGTGGCAGGACACATCT+CGG | 0.597217 | 2.3:-52020906 | None:intergenic |
| ACCATATCTTATTGGAACTG+GGG | 0.604069 | 2.3:+52021557 | MS.gene84154:CDS |
| CCATATCTTATTGGAACTGG+GGG | 0.604476 | 2.3:+52021558 | MS.gene84154:CDS |
| GATGGCTGATGGAGGGAATG+TGG | 0.613469 | 2.3:+52020974 | MS.gene84154:CDS |
| AGGCCTGGTTTGATGGCTGA+TGG | 0.614038 | 2.3:+52020963 | MS.gene84154:CDS |
| CGTGCTCCAAGAAACAAAGC+AGG | 0.615747 | 2.3:+52020417 | MS.gene84154:CDS |
| CAACCATGACATTGAAGATG+GGG | 0.616574 | 2.3:+52021066 | MS.gene84154:CDS |
| ACTGTCATAACTCCTGCTGC+CGG | 0.622897 | 2.3:-52021639 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTATTCATTTTTTC+AGG | + | chr2.3:52021518-52021537 | MS.gene84154:intron | 10.0% |
| !! | AAAATCATGAATTCTTATTA+AGG | - | chr2.3:52020604-52020623 | None:intergenic | 15.0% |
| !!! | ATTAATATTAAGCAAGTTTT+CGG | + | chr2.3:52020381-52020400 | MS.gene84154:CDS | 15.0% |
| !!! | GTTAAATTTTAATCAATTCT+TGG | + | chr2.3:52020486-52020505 | MS.gene84154:intron | 15.0% |
| !! | ATGATTACATCATTAAAGTT+CGG | + | chr2.3:52021607-52021626 | MS.gene84154:CDS | 20.0% |
| !! | GTGATATACAAATGAAATTA+TGG | - | chr2.3:52021232-52021251 | None:intergenic | 20.0% |
| !!! | AATCAATTCTTGGATTTTAT+TGG | + | chr2.3:52020496-52020515 | MS.gene84154:intron | 20.0% |
| !!! | TTAATATTAAGCAAGTTTTC+GGG | + | chr2.3:52020382-52020401 | MS.gene84154:CDS | 20.0% |
| ! | AATTTCTCTACAAACATGTA+AGG | - | chr2.3:52021401-52021420 | None:intergenic | 25.0% |
| ! | GAAATTAGACCATATCTTAT+TGG | + | chr2.3:52021549-52021568 | MS.gene84154:CDS | 25.0% |
| !! | AGAAAATGTAGAGAAAGTTT+TGG | + | chr2.3:52020932-52020951 | MS.gene84154:CDS | 25.0% |
| ACTAAGTTGTTTATCCAAAC+AGG | + | chr2.3:52021341-52021360 | MS.gene84154:intron | 30.0% | |
| ATGCTTCATAGATTGCAATT+TGG | - | chr2.3:52020628-52020647 | None:intergenic | 30.0% | |
| ! | ACGCTATTCTTGAGATTTTA+TGG | - | chr2.3:52021286-52021305 | None:intergenic | 30.0% |
| ! | CGCTATTCTTGAGATTTTAT+GGG | - | chr2.3:52021285-52021304 | None:intergenic | 30.0% |
| ! | TACACTTTCGACATTTTCTT+CGG | - | chr2.3:52021174-52021193 | None:intergenic | 30.0% |
| !! | GCTTTTATGTTTTGTTACGA+AGG | - | chr2.3:52021257-52021276 | None:intergenic | 30.0% |
| !!! | AGAAAGTTTTGGATGAAGTA+AGG | + | chr2.3:52020943-52020962 | MS.gene84154:CDS | 30.0% |
| !!! | CATTGCAATGTTTTTTTTGC+AGG | + | chr2.3:52020870-52020889 | MS.gene84154:intron | 30.0% |
| ACCATATCTTATTGGAACTG+GGG | + | chr2.3:52021557-52021576 | MS.gene84154:CDS | 35.0% | |
| AGACCATATCTTATTGGAAC+TGG | + | chr2.3:52021555-52021574 | MS.gene84154:CDS | 35.0% | |
| ATCATTAAAGTTCGGCTAAG+TGG | + | chr2.3:52021615-52021634 | MS.gene84154:CDS | 35.0% | |
| CGATAAGATTCCAGAAATCT+TGG | + | chr2.3:52021106-52021125 | MS.gene84154:CDS | 35.0% | |
| GAAAACAGTTTGACCTGATA+CGG | + | chr2.3:52021308-52021327 | MS.gene84154:intron | 35.0% | |
| GACCATATCTTATTGGAACT+GGG | + | chr2.3:52021556-52021575 | MS.gene84154:CDS | 35.0% | |
| GTTGTTATCCTCAAACTACA+AGG | + | chr2.3:52021020-52021039 | MS.gene84154:CDS | 35.0% | |
| TAAGATTCCAGAAATCTTGG+AGG | + | chr2.3:52021109-52021128 | MS.gene84154:CDS | 35.0% | |
| TCAACCATGACATTGAAGAT+GGG | + | chr2.3:52021065-52021084 | MS.gene84154:CDS | 35.0% | |
| TTGTGAACTTAGATCCTGTT+TGG | - | chr2.3:52021358-52021377 | None:intergenic | 35.0% | |
| ! | ATCTAATCAAGTAGCTTGCA+AGG | + | chr2.3:52020816-52020835 | MS.gene84154:intron | 35.0% |
| ! | ATGTCGAAAGTGTACGTAAT+TGG | + | chr2.3:52021180-52021199 | MS.gene84154:intron | 35.0% |
| ! | TCTAATCAAGTAGCTTGCAA+GGG | + | chr2.3:52020817-52020836 | MS.gene84154:intron | 35.0% |
| ! | TCTACATTTTCTTCTGTCAG+TGG | - | chr2.3:52020924-52020943 | None:intergenic | 35.0% |
| !! | AATGAGAGTTGTTTTCTCAG+AGG | + | chr2.3:52020351-52020370 | MS.gene84154:CDS | 35.0% |
| AGTTAAGCACTTACCGTATC+AGG | - | chr2.3:52021324-52021343 | None:intergenic | 40.0% | |
| CAACCATGACATTGAAGATG+GGG | + | chr2.3:52021066-52021085 | MS.gene84154:CDS | 40.0% | |
| CAGATACTAGATACTGAGAC+TGG | + | chr2.3:52021137-52021156 | MS.gene84154:CDS | 40.0% | |
| CCATATCTTATTGGAACTGG+GGG | + | chr2.3:52021558-52021577 | MS.gene84154:CDS | 40.0% | |
| CTCAACCATGACATTGAAGA+TGG | + | chr2.3:52021064-52021083 | MS.gene84154:CDS | 40.0% | |
| TGTTCAACCTCCAAGATTTC+TGG | - | chr2.3:52021119-52021138 | None:intergenic | 40.0% | |
| TTCAATGTCATGGTTGAGCT+AGG | - | chr2.3:52021062-52021081 | None:intergenic | 40.0% | |
| !! | GAAGAACCTGCTTTGTTTCT+TGG | - | chr2.3:52020426-52020445 | None:intergenic | 40.0% |
| CACAAGCTCCTTGTAGTTTG+AGG | - | chr2.3:52021031-52021050 | None:intergenic | 45.0% | |
| CCAAACACGTCGTCAATCTA+AGG | + | chr2.3:52020768-52020787 | MS.gene84154:intron | 45.0% | |
| CCCCCAGTTCCAATAAGATA+TGG | - | chr2.3:52021561-52021580 | None:intergenic | 45.0% | |
| CCTTAGATTGACGACGTGTT+TGG | - | chr2.3:52020771-52020790 | None:intergenic | 45.0% | |
| CTCAAACTACAAGGAGCTTG+TGG | + | chr2.3:52021029-52021048 | MS.gene84154:CDS | 45.0% | |
| GATCCCCATCTTCAATGTCA+TGG | - | chr2.3:52021072-52021091 | None:intergenic | 45.0% | |
| GTAACGTGTCAGTGTCATGT+TGG | + | chr2.3:52020719-52020738 | MS.gene84154:intron | 45.0% | |
| GTGGCATTGCATGAGATAGA+TGG | + | chr2.3:52020993-52021012 | MS.gene84154:CDS | 45.0% | |
| TAAAGTTCGGCTAAGTGGAC+CGG | + | chr2.3:52021620-52021639 | MS.gene84154:CDS | 45.0% | |
| TATCTTATTGGAACTGGGGG+AGG | + | chr2.3:52021561-52021580 | MS.gene84154:CDS | 45.0% | |
| ! | CATTTTCTTCTGTCAGTGGC+AGG | - | chr2.3:52020920-52020939 | None:intergenic | 45.0% |
| ! | TGAAGTAAGGCCTGGTTTGA+TGG | + | chr2.3:52020956-52020975 | MS.gene84154:CDS | 45.0% |
| ! | TTGGTGTCTGACATGTGTCA+GGG | - | chr2.3:52020752-52020771 | None:intergenic | 45.0% |
| !! | GTTTTGGATGAAGTAAGGCC+TGG | + | chr2.3:52020948-52020967 | MS.gene84154:CDS | 45.0% |
| !! | TTTGGTGTCTGACATGTGTC+AGG | - | chr2.3:52020753-52020772 | None:intergenic | 45.0% |
| ACTGTCATAACTCCTGCTGC+CGG | - | chr2.3:52021642-52021661 | None:intergenic | 50.0% | |
| AGCTGCACAGCAGCAATAGA+AGG | - | chr2.3:52021702-52021721 | None:intergenic | 50.0% | |
| CGTGCTCCAAGAAACAAAGC+AGG | + | chr2.3:52020417-52020436 | MS.gene84154:CDS | 50.0% | |
| ! | CTGGTTTGATGGCTGATGGA+GGG | + | chr2.3:52020967-52020986 | MS.gene84154:CDS | 50.0% |
| CCTCCATCAGCCATCAAACC+AGG | - | chr2.3:52020969-52020988 | None:intergenic | 55.0% | |
| GATGGCTGATGGAGGGAATG+TGG | + | chr2.3:52020974-52020993 | MS.gene84154:CDS | 55.0% | |
| GTCAGTGGCAGGACACATCT+CGG | - | chr2.3:52020909-52020928 | None:intergenic | 55.0% | |
| ! | AGGCCTGGTTTGATGGCTGA+TGG | + | chr2.3:52020963-52020982 | MS.gene84154:CDS | 55.0% |
| ! | CCTGGTTTGATGGCTGATGG+AGG | + | chr2.3:52020966-52020985 | MS.gene84154:CDS | 55.0% |
| CGGCTAAGTGGACCGGCAGC+AGG | + | chr2.3:52021627-52021646 | MS.gene84154:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 52020318 | 52021731 | 52020318 | ID=MS.gene84154 |
| chr2.3 | mRNA | 52020318 | 52021731 | 52020318 | ID=MS.gene84154.t1;Parent=MS.gene84154 |
| chr2.3 | exon | 52020318 | 52020438 | 52020318 | ID=MS.gene84154.t1.exon1;Parent=MS.gene84154.t1 |
| chr2.3 | CDS | 52020318 | 52020438 | 52020318 | ID=cds.MS.gene84154.t1;Parent=MS.gene84154.t1 |
| chr2.3 | exon | 52020892 | 52021190 | 52020892 | ID=MS.gene84154.t1.exon2;Parent=MS.gene84154.t1 |
| chr2.3 | CDS | 52020892 | 52021190 | 52020892 | ID=cds.MS.gene84154.t1;Parent=MS.gene84154.t1 |
| chr2.3 | exon | 52021540 | 52021731 | 52021540 | ID=MS.gene84154.t1.exon3;Parent=MS.gene84154.t1 |
| chr2.3 | CDS | 52021540 | 52021731 | 52021540 | ID=cds.MS.gene84154.t1;Parent=MS.gene84154.t1 |
| Gene Sequence |
| Protein sequence |
