AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011217.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011217.01.T01 MTR_2g100200 48.352 364 108 5 51 337 14 374 1.03e-92 290
MsG0280011217.01.T01 MTR_2g100200 56.458 271 39 5 135 345 236 487 1.61e-84 268
MsG0280011217.01.T01 MTR_7g066990 27.723 202 107 6 157 336 209 393 1.15e-12 70.5
MsG0280011217.01.T01 MTR_5g077220 26.953 256 154 8 106 338 359 604 2.51e-12 69.3
MsG0280011217.01.T01 MTR_8g105170 26.000 250 146 5 157 385 334 565 2.18e-11 66.6
MsG0280011217.01.T01 MTR_8g054410 25.100 251 137 8 100 329 332 552 2.23e-11 66.2
MsG0280011217.01.T01 MTR_6g072030 25.248 202 115 4 157 337 247 433 2.68e-11 65.9
MsG0280011217.01.T01 MTR_6g075180 22.619 252 136 5 157 358 245 487 6.08e-11 64.7
MsG0280011217.01.T01 MTR_3g114700 22.180 266 149 8 139 358 150 403 7.73e-11 64.3
MsG0280011217.01.T01 MTR_7g103600 28.261 184 104 5 176 342 125 297 9.74e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011217.01.T01 AT5G43820 43.103 232 72 4 176 347 277 508 7.61e-50 177
MsG0280011217.01.T01 AT5G43820 29.201 363 156 8 68 338 41 394 4.46e-32 128
MsG0280011217.01.T01 AT5G41170 26.190 210 118 6 148 335 54 248 9.63e-12 67.0
MsG0280011217.01.T01 AT5G41170 26.442 208 116 6 149 334 155 347 1.04e-11 67.0
MsG0280011217.01.T01 AT5G41170 26.442 208 116 6 149 334 155 347 1.09e-11 67.0
MsG0280011217.01.T01 AT5G39710 24.658 219 127 5 141 337 351 553 3.92e-11 65.5

Find 86 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTATTGAACTTTGGGAATT+TGG 0.122868 2:-81064144 MsG0280011217.01.T01:CDS
AATTCAGTTGTTTGGGAATT+TGG 0.146474 2:-81063896 MsG0280011217.01.T01:CDS
ATGAGAAACGTTGATGTAAT+TGG 0.224155 2:+81064405 None:intergenic
TCAAAAGCAATTCAGTTGTT+TGG 0.281031 2:-81063904 MsG0280011217.01.T01:CDS
GTATTGAACTTTGGGAATTT+GGG 0.281740 2:-81064143 MsG0280011217.01.T01:CDS
CAAAAGCAATTCAGTTGTTT+GGG 0.286910 2:-81063903 MsG0280011217.01.T01:CDS
CTACAAGAAGACAAGAAAAT+TGG 0.287221 2:-81063277 MsG0280011217.01.T01:CDS
GATGTAAATGTTGATATTAT+TGG 0.293583 2:-81064170 MsG0280011217.01.T01:CDS
TGTGATTATTACATTCTTCA+TGG 0.305839 2:-81064482 MsG0280011217.01.T01:CDS
CAGCCAGCCTTCAGCTTTGA+AGG 0.314078 2:+81061190 None:intergenic
TGATTGTGATTCTGAGGTTT+TGG 0.324532 2:+81064307 None:intergenic
GTAAAAGTTGAGAGATTTGA+TGG 0.327599 2:+81064342 None:intergenic
ATTGGTAAAGTATTGAACTT+TGG 0.339456 2:-81064152 MsG0280011217.01.T01:CDS
AAGTGCATCGGCCACTTTCC+TGG 0.348306 2:+81063410 None:intergenic
TGATGATCCAGACCCGTTCT+TGG 0.351145 2:-81061307 MsG0280011217.01.T01:CDS
TTGGTAAAGTATTGAACTTT+GGG 0.351996 2:-81064151 MsG0280011217.01.T01:CDS
TGAGAAACGTTGATGTAATT+GGG 0.362815 2:+81064406 None:intergenic
CAAGGAGTTGTGCCTCCTAC+TGG 0.379823 2:-81063363 MsG0280011217.01.T01:CDS
CACGGATCCAATAGGGTTGC+TGG 0.387111 2:-81061250 MsG0280011217.01.T01:CDS
ATTGAAACCGTAACAGATCT+TGG 0.395436 2:-81061381 MsG0280011217.01.T01:CDS
TAATTGGGGAAGAGGGTGTT+TGG 0.400808 2:+81064421 None:intergenic
TATTGGATCCGTGCCTTTGA+AGG 0.413281 2:+81061260 None:intergenic
ATACCACGTAGTTTATCTTC+AGG 0.413531 2:+81064254 None:intergenic
TCAGAATCCAAATCCGTTGA+TGG 0.418697 2:-81064287 MsG0280011217.01.T01:CDS
TGGAGGAGGCTTTGCGCAAA+GGG 0.420469 2:-81063067 MsG0280011217.01.T01:CDS
CATGTCAGAAATCTTGCTTA+TGG 0.429523 2:+81061428 None:intergenic
GTGTCGTTCTTCTTGACTGC+TGG 0.433510 2:+81061357 None:intergenic
TTTGGGAATTTGGATGATCT+CGG 0.440477 2:-81063886 MsG0280011217.01.T01:CDS
CAAGTTGTCCTATGTTGTAA+AGG 0.442451 2:+81063108 None:intergenic
TTCAAAGGCACGGATCCAAT+AGG 0.446448 2:-81061258 MsG0280011217.01.T01:CDS
GTGGCGAAAGAGGGTGAAAA+TGG 0.446858 2:-81066203 MsG0280011217.01.T01:CDS
TGCTGGTCCAAGATCTGTTA+CGG 0.465574 2:+81061374 None:intergenic
CGTTGATGTAATTGGGGAAG+AGG 0.469955 2:+81064413 None:intergenic
GTGAGAGCCAGCAACCCTAT+TGG 0.471151 2:+81061243 None:intergenic
TTGCATGGTATCCATCTTGT+TGG 0.471260 2:+81061455 None:intergenic
CTTGCTTATGGAAGCTTGCA+TGG 0.483544 2:+81061440 None:intergenic
GAGAGATTTGATGGAGAATG+AGG 0.484549 2:+81064351 None:intergenic
TCAAAGGCACGGATCCAATA+GGG 0.491538 2:-81061257 MsG0280011217.01.T01:CDS
TGATGTTTGATGAGATGTTA+AGG 0.501851 2:-81063386 MsG0280011217.01.T01:CDS
TTAGATGAGATGAGATTGAA+TGG 0.502582 2:-81063991 MsG0280011217.01.T01:CDS
TGCTGTTCTTGTCATGGAGG+AGG 0.503656 2:-81063081 MsG0280011217.01.T01:CDS
TACCACGTAGTTTATCTTCA+GGG 0.505363 2:+81064255 None:intergenic
AACATTGTTAAGTGTATGGC+AGG 0.509537 2:-81063189 MsG0280011217.01.T01:intron
ATCAAACAGTTATGCAGCTA+TGG 0.515720 2:-81063324 MsG0280011217.01.T01:CDS
TGAAAATGCTGTTCTTGTCA+TGG 0.518590 2:-81063087 MsG0280011217.01.T01:CDS
CAGAATCCAAATCCGTTGAT+GGG 0.520509 2:-81064286 MsG0280011217.01.T01:CDS
TTTACTGTATACAAGCCTGC+TGG 0.521200 2:+81063037 None:intergenic
TAGATCATCATAGCTGCATA+TGG 0.521595 2:+81063297 None:intergenic
TTGGGAATTTGGATGATCTC+GGG 0.529597 2:-81063885 MsG0280011217.01.T01:intron
TAGAATGAATGAGGCTGTTG+AGG 0.536115 2:-81063602 MsG0280011217.01.T01:CDS
ATTTACATCAATACACACAT+TGG 0.538909 2:+81064184 None:intergenic
GCAAAGGGTTCTGTCCCAGC+AGG 0.539699 2:-81063052 MsG0280011217.01.T01:CDS
CAAGATCGATGGAGAAGAAG+AGG 0.540578 2:-81066173 MsG0280011217.01.T01:CDS
ATGACAGGATTCCAACAAGA+TGG 0.546276 2:-81061466 MsG0280011217.01.T01:intron
GGATTCTGATTGTGATTCTG+AGG 0.547566 2:+81064301 None:intergenic
ATGGAGGAGGCTTTGCGCAA+AGG 0.548012 2:-81063068 MsG0280011217.01.T01:CDS
TTACTGTATACAAGCCTGCT+GGG 0.548303 2:+81063038 None:intergenic
AAGGAGTTGTGCCTCCTACT+GGG 0.549624 2:-81063362 MsG0280011217.01.T01:CDS
GGATCCGTGCCTTTGAAGGT+AGG 0.550575 2:+81061264 None:intergenic
GGAGAATGAGGCGTTCATCA+AGG 0.559602 2:+81064363 None:intergenic
GCTGCATAACTGTTTGATGA+AGG 0.559887 2:+81063329 None:intergenic
GTTGATGTAATTGGGGAAGA+GGG 0.563762 2:+81064414 None:intergenic
GAATTTGGGTGGTGAAGCAA+TGG 0.570595 2:-81064129 MsG0280011217.01.T01:intron
ATGGTGAAGTGCAAGATCGA+TGG 0.576001 2:-81066184 MsG0280011217.01.T01:CDS
TACACCTACCTTCAAAGGCA+CGG 0.576905 2:-81061268 MsG0280011217.01.T01:CDS
GTTTACGAGTACATCATAAG+TGG 0.577031 2:-81063131 MsG0280011217.01.T01:CDS
ATCAAACATCAAAAGTGCAT+CGG 0.579682 2:+81063398 None:intergenic
AGTCGAACCTTCAAAGCTGA+AGG 0.580363 2:-81061197 None:intergenic
ATAAGTGGCCTTTACAACAT+AGG 0.587644 2:-81063116 MsG0280011217.01.T01:CDS
ATTGAATGAGTGGCGAAAGA+GGG 0.591110 2:-81066212 MsG0280011217.01.T01:CDS
GAGAAACGTTGATGTAATTG+GGG 0.596730 2:+81064407 None:intergenic
TAGAGCAGGTAGAATGAATG+AGG 0.597801 2:-81063611 MsG0280011217.01.T01:CDS
AATTGAATGAGTGGCGAAAG+AGG 0.598233 2:-81066213 MsG0280011217.01.T01:CDS
GCATAACTGTTTGATGAAGG+AGG 0.603385 2:+81063332 None:intergenic
GGCAGGAGATGCAAGAATGT+GGG 0.604659 2:-81063172 MsG0280011217.01.T01:CDS
GAGGTTATAGTCCCAGTAGG+AGG 0.607543 2:+81063351 None:intergenic
ATCATCATAGCTGCATATGG+TGG 0.614246 2:+81063300 None:intergenic
ACCACGTAGTTTATCTTCAG+GGG 0.614563 2:+81064256 None:intergenic
TTTGATGAGATGTTAAGGCA+AGG 0.615366 2:-81063381 MsG0280011217.01.T01:CDS
GAACGACACACTTACAAACT+CGG 0.620791 2:-81061343 MsG0280011217.01.T01:CDS
AAGGAGGTTATAGTCCCAGT+AGG 0.631328 2:+81063348 None:intergenic
TGGCAGGAGATGCAAGAATG+TGG 0.637681 2:-81063173 MsG0280011217.01.T01:CDS
TTGAACTTTGGGAATTTGGG+TGG 0.644522 2:-81064140 MsG0280011217.01.T01:CDS
AAATGGTGAAATTGAATGAG+TGG 0.645651 2:-81066222 MsG0280011217.01.T01:CDS
AAATGCTGTTCTTGTCATGG+AGG 0.741667 2:-81063084 MsG0280011217.01.T01:CDS
TCCCCTGAAGATAAACTACG+TGG 0.767720 2:-81064257 MsG0280011217.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTAAGGAAAATTT+AGG - Chr2:81062556-81062575 MsG0280011217.01.T01:intron 10.0%
!! AATTTAATTAAGGAAAATTT+AGG + Chr2:81062575-81062556 None:intergenic 10.0%
!! TAAAGAATAAAAAGAATTAA+TGG + Chr2:81061932-81061951 None:intergenic 10.0%
!!! ATCTCATATTTTTTTATTTA+TGG - Chr2:81062382-81062401 MsG0280011217.01.T01:intron 10.0%
!!! TTTAATTCTTTAATCTTTTA+AGG - Chr2:81061975-81061994 MsG0280011217.01.T01:intron 10.0%
!! AAAATTAATTTAAATGAGCA+AGG + Chr2:81065783-81065802 None:intergenic 15.0%
!! ATATTAAATAGTCAATAAAC+TGG + Chr2:81065594-81065613 None:intergenic 15.0%
!! ATTGAATATGTAGTAATTAT+AGG - Chr2:81062359-81062378 MsG0280011217.01.T01:intron 15.0%
!! TGTCAAAAAAAAAAAAAAAC+AGG - Chr2:81062599-81062618 MsG0280011217.01.T01:intron 15.0%
!! TTTATGAAAACAAAAGATAT+TGG - Chr2:81061689-81061708 MsG0280011217.01.T01:intron 15.0%
!! TTTGTCAAAAAAAAAAAAAC+AGG + Chr2:81061907-81061926 None:intergenic 15.0%
!!! ATTTAGGTTTAAAGAATTAA+TGG - Chr2:81062572-81062591 MsG0280011217.01.T01:intron 15.0%
!!! ATTTTTAATTTCATTTCGAT+TGG - Chr2:81063888-81063907 MsG0280011217.01.T01:CDS 15.0%
!!! TTTTATTGAATCATCATTTT+AGG + Chr2:81062100-81062119 None:intergenic 15.0%
!!! TTTTTTTAAGAATAGAAAAG+TGG + Chr2:81062310-81062329 None:intergenic 15.0%
!! AAAAAAAAAAAACAGGTTTG+AGG - Chr2:81062606-81062625 MsG0280011217.01.T01:intron 20.0%
!! AAAAAAAAAAAACAGGTTTG+AGG + Chr2:81062625-81062606 None:intergenic 20.0%
!! AAAAAGAATCGTGTATTTAA+TGG - Chr2:81062440-81062459 MsG0280011217.01.T01:intron 20.0%
!! AAATCCATATTTCTTCATTA+TGG - Chr2:81062468-81062487 MsG0280011217.01.T01:intron 20.0%
!! ATCTTTCTTCAAAAACTAAA+GGG - Chr2:81063187-81063206 MsG0280011217.01.T01:intron 20.0%
!! ATGCAGATAATAGATATTTA+TGG + Chr2:81065492-81065511 None:intergenic 20.0%
!! GATGTAAATGTTGATATTAT+TGG - Chr2:81063250-81063269 MsG0280011217.01.T01:intron 20.0%
!! GCATTAAAGAATATTTACAA+AGG + Chr2:81064964-81064983 None:intergenic 20.0%
!! TAGTTAAAAAATTCAGTGTA+AGG + Chr2:81064634-81064653 None:intergenic 20.0%
!! TATCTTTCTTCAAAAACTAA+AGG - Chr2:81063186-81063205 MsG0280011217.01.T01:intron 20.0%
!! TTGTAGAATATATGAATGTT+AGG + Chr2:81063969-81063988 None:intergenic 20.0%
!!! ATAATTCATTTGAAACAGAA+TGG - Chr2:81065910-81065929 MsG0280011217.01.T01:intron 20.0%
!!! ATTTTTCATTTTTATGATGC+AGG - Chr2:81063404-81063423 MsG0280011217.01.T01:CDS 20.0%
!!! CAATGGTTATGTTTTTAATT+GGG - Chr2:81063308-81063327 MsG0280011217.01.T01:CDS 20.0%
!!! GGTTTTATTTGTACAAAAAA+AGG + Chr2:81062289-81062308 None:intergenic 20.0%
!!! TCATACTGACTATAATTAAT+TGG - Chr2:81065652-81065671 MsG0280011217.01.T01:intron 20.0%
!!! TCGGAATTTTTTTATTACAA+GGG - Chr2:81061524-81061543 MsG0280011217.01.T01:intron 20.0%
!!! TTCGGAATTTTTTTATTACA+AGG - Chr2:81061523-81061542 MsG0280011217.01.T01:intron 20.0%
!!! TTTTTAATATAGCTGTCTTT+GGG - Chr2:81064721-81064740 MsG0280011217.01.T01:intron 20.0%
! AAAAAAACGAATTATAGACG+TGG - Chr2:81061413-81061432 MsG0280011217.01.T01:CDS 25.0%
! AATAGTCAATAAACTGGAAA+AGG + Chr2:81065588-81065607 None:intergenic 25.0%
! ATAGTCAATAAACTGGAAAA+GGG + Chr2:81065587-81065606 None:intergenic 25.0%
! ATGGATATTCAATAGAAGTT+AGG + Chr2:81061626-81061645 None:intergenic 25.0%
! ATTTACATCAATACACACAT+TGG + Chr2:81063239-81063258 None:intergenic 25.0%
! CACGTTTCTTAATTAAAAAG+AGG + Chr2:81062339-81062358 None:intergenic 25.0%
! GTTTCAACTTTCAATAAACA+GGG + Chr2:81065343-81065362 None:intergenic 25.0%
! TAAAAAACGCGAAAAGTTAT+TGG - Chr2:81064484-81064503 MsG0280011217.01.T01:CDS 25.0%
! TAAAGATAACCTTGTTGAAT+AGG - Chr2:81065087-81065106 MsG0280011217.01.T01:intron 25.0%
! TAAATGTTATAGTGTAGTCT+TGG - Chr2:81064748-81064767 MsG0280011217.01.T01:intron 25.0%
! TAATTGTATCCATACGAAAT+TGG - Chr2:81064790-81064809 MsG0280011217.01.T01:intron 25.0%
! TAGAAATATCACTACTTTCA+TGG + Chr2:81061645-81061664 None:intergenic 25.0%
! TATTGAAAGTTGAAACACAT+AGG - Chr2:81065347-81065366 MsG0280011217.01.T01:intron 25.0%
! TGGATATTCAATAGAAGTTA+GGG + Chr2:81061625-81061644 None:intergenic 25.0%
! TGTGATTATTACATTCTTCA+TGG - Chr2:81062938-81062957 MsG0280011217.01.T01:intron 25.0%
! TGTTTCAACTTTCAATAAAC+AGG + Chr2:81065344-81065363 None:intergenic 25.0%
! TTATAGTCAGTATGACATAT+TGG + Chr2:81065647-81065666 None:intergenic 25.0%
!! ACGTATTTCTATTTGCAATA+TGG - Chr2:81064815-81064834 MsG0280011217.01.T01:intron 25.0%
!! AGCTAGTAGAAATTTAAAGT+TGG - Chr2:81065001-81065020 MsG0280011217.01.T01:intron 25.0%
!! CGTATTTCTATTTGCAATAT+GGG - Chr2:81064816-81064835 MsG0280011217.01.T01:intron 25.0%
!! GGTGTATGAAGTATTATAAT+GGG - Chr2:81063922-81063941 MsG0280011217.01.T01:CDS 25.0%
!! GTTTTTAATATAGCTGTCTT+TGG - Chr2:81064720-81064739 MsG0280011217.01.T01:intron 25.0%
!!! ACTATTAAATAACTTGGTGT+TGG - Chr2:81065202-81065221 MsG0280011217.01.T01:intron 25.0%
!!! ATTGGTAAAGTATTGAACTT+TGG - Chr2:81063268-81063287 MsG0280011217.01.T01:intron 25.0%
!!! ATTTAAAGTTGGTTTTTCTG+TGG - Chr2:81065012-81065031 MsG0280011217.01.T01:intron 25.0%
!!! CGGTTTTTAATTCAATGAAA+GGG - Chr2:81063632-81063651 MsG0280011217.01.T01:intron 25.0%
!!! GAGTTTGTTTAATTTTTTGC+TGG - Chr2:81065740-81065759 MsG0280011217.01.T01:intron 25.0%
!!! GCAATGGTTATGTTTTTAAT+TGG - Chr2:81063307-81063326 MsG0280011217.01.T01:CDS 25.0%
!!! TCGGTTTTTAATTCAATGAA+AGG - Chr2:81063631-81063650 MsG0280011217.01.T01:intron 25.0%
!!! TTGGTAAAGTATTGAACTTT+GGG - Chr2:81063269-81063288 MsG0280011217.01.T01:intron 25.0%
!!! TTTTAATTCAATGAAAGGGA+AGG - Chr2:81063636-81063655 MsG0280011217.01.T01:intron 25.0%
AATACGTTACCAATTTCGTA+TGG + Chr2:81064802-81064821 None:intergenic 30.0%
AATTCAGTTGTTTGGGAATT+TGG - Chr2:81063524-81063543 MsG0280011217.01.T01:CDS 30.0%
ACGAAAATGACCTATATTAC+AGG - Chr2:81061581-81061600 MsG0280011217.01.T01:intron 30.0%
ATCACAGAAACTAGAAGAAT+TGG + Chr2:81062924-81062943 None:intergenic 30.0%
ATCTATTATCTGCATATGCA+TGG - Chr2:81065497-81065516 MsG0280011217.01.T01:intron 30.0%
ATGAGAAACGTTGATGTAAT+TGG + Chr2:81063018-81063037 None:intergenic 30.0%
ATGAGATTGAGAAGTTATGA+AGG - Chr2:81063722-81063741 MsG0280011217.01.T01:intron 30.0%
CAAAAGCAATTCAGTTGTTT+GGG - Chr2:81063517-81063536 MsG0280011217.01.T01:intron 30.0%
CCAAATCGTAAATCTAGAAA+AGG + Chr2:81064684-81064703 None:intergenic 30.0%
CCAGATATGTGAAAATCAAA+TGG + Chr2:81064571-81064590 None:intergenic 30.0%
CGAAAATGACCTATATTACA+GGG - Chr2:81061582-81061601 MsG0280011217.01.T01:intron 30.0%
CTACAAGAAGACAAGAAAAT+TGG - Chr2:81064143-81064162 MsG0280011217.01.T01:CDS 30.0%
CTCTCGTATTTCTTCATTTA+TGG + Chr2:81062046-81062065 None:intergenic 30.0%
CTTTCTAAGTTTGGTAAATG+TGG - Chr2:81064208-81064227 MsG0280011217.01.T01:CDS 30.0%
GACACATATAATGTTGTTGT+TGG - Chr2:81063673-81063692 MsG0280011217.01.T01:intron 30.0%
GCAACATAAACTTATTACAG+AGG - Chr2:81064871-81064890 MsG0280011217.01.T01:intron 30.0%
GCACCTTTACATTAACATAA+TGG + Chr2:81065252-81065271 None:intergenic 30.0%
GCATATTACTGGATTTCAAA+TGG - Chr2:81065525-81065544 MsG0280011217.01.T01:intron 30.0%
GGTCCATTATGTTAATGTAA+AGG - Chr2:81065246-81065265 MsG0280011217.01.T01:intron 30.0%
GTAAAAGTTGAGAGATTTGA+TGG + Chr2:81063081-81063100 None:intergenic 30.0%
GTTGCCATAATGAAGAAATA+TGG + Chr2:81062475-81062494 None:intergenic 30.0%
TAGTTACCATGTCATTGTTA+AGG - Chr2:81063365-81063384 MsG0280011217.01.T01:CDS 30.0%
TCAAAAGCAATTCAGTTGTT+TGG - Chr2:81063516-81063535 MsG0280011217.01.T01:intron 30.0%
TCCTATAATCCTATAACAGA+CGG + Chr2:81065391-81065410 None:intergenic 30.0%
TCGTAAATCTAGAAAAGGAA+CGG + Chr2:81064679-81064698 None:intergenic 30.0%
TCTTCAAAAACTAAAGGGTA+AGG - Chr2:81063192-81063211 MsG0280011217.01.T01:intron 30.0%
TGAGAAACGTTGATGTAATT+GGG + Chr2:81063017-81063036 None:intergenic 30.0%
TGATGTTTGATGAGATGTTA+AGG - Chr2:81064034-81064053 MsG0280011217.01.T01:intron 30.0%
TTAACTACCAAGGAAAACTT+CGG - Chr2:81061822-81061841 MsG0280011217.01.T01:intron 30.0%
TTAACTGCCGAATTATAAAC+CGG + Chr2:81062712-81062731 None:intergenic 30.0%
TTAGATGAGATGAGATTGAA+TGG - Chr2:81063429-81063448 MsG0280011217.01.T01:intron 30.0%
TTCTCATGATTTCAATACGA+TGG - Chr2:81063764-81063783 MsG0280011217.01.T01:intron 30.0%
TTCTGCTATCTTCTTTGTAA+AGG - Chr2:81065171-81065190 MsG0280011217.01.T01:intron 30.0%
TTGAGAAGTTATGAAGGAAA+TGG - Chr2:81063728-81063747 MsG0280011217.01.T01:intron 30.0%
! AAATCAAACCGGAATTTTAC+AGG - Chr2:81061550-81061569 MsG0280011217.01.T01:intron 30.0%
! AATCAAACCGGAATTTTACA+GGG - Chr2:81061551-81061570 MsG0280011217.01.T01:intron 30.0%
! ACATATAATGTTGTTGTTGG+TGG - Chr2:81063676-81063695 MsG0280011217.01.T01:intron 30.0%
! AGTATTGAACTTTGGGAATT+TGG - Chr2:81063276-81063295 MsG0280011217.01.T01:CDS 30.0%
! ATATTTACAAAGGCATGACT+TGG + Chr2:81064954-81064973 None:intergenic 30.0%
! ATCAAACATCAAAAGTGCAT+CGG + Chr2:81064025-81064044 None:intergenic 30.0%
! ATTTCGATTGGAGATTTTGA+TGG - Chr2:81063900-81063919 MsG0280011217.01.T01:CDS 30.0%
! ATTTTAGGCAAATTCATGAC+AGG - Chr2:81065939-81065958 MsG0280011217.01.T01:intron 30.0%
! CCTTTTCTAGATTTACGATT+TGG - Chr2:81064681-81064700 MsG0280011217.01.T01:intron 30.0%
! CTTCATTAACCAAAGTACTT+TGG - Chr2:81064920-81064939 MsG0280011217.01.T01:intron 30.0%
! GAAAAATAGCCAAAGTACTT+TGG + Chr2:81064932-81064951 None:intergenic 30.0%
! GGGTGTATGAAGTATTATAA+TGG - Chr2:81063921-81063940 MsG0280011217.01.T01:CDS 30.0%
! GTATTGAACTTTGGGAATTT+GGG - Chr2:81063277-81063296 MsG0280011217.01.T01:CDS 30.0%
! GTTTTTCATCCCTGTAATAT+AGG + Chr2:81061594-81061613 None:intergenic 30.0%
!! AGTGATATTTCTAGTGACAT+TGG - Chr2:81061652-81061671 MsG0280011217.01.T01:intron 30.0%
!! ATTTTCACATATCTGGTCTT+TGG - Chr2:81064575-81064594 MsG0280011217.01.T01:intron 30.0%
!! CATTTTAACAAACACCTGTT+GGG - Chr2:81062857-81062876 MsG0280011217.01.T01:intron 30.0%
!! CCATTTGATTTTCACATATC+TGG - Chr2:81064568-81064587 MsG0280011217.01.T01:intron 30.0%
!! TTTCGATTGGAGATTTTGAT+GGG - Chr2:81063901-81063920 MsG0280011217.01.T01:CDS 30.0%
!! TTTTCGCGTTTTTTAGTGAA+CGG + Chr2:81064479-81064498 None:intergenic 30.0%
!!! AGTTTTGAGACAGTGATTTT+TGG - Chr2:81065446-81065465 MsG0280011217.01.T01:intron 30.0%
!!! ATTGATAGTTTTGTCAATGC+CGG - Chr2:81063486-81063505 MsG0280011217.01.T01:intron 30.0%
!!! TTAATTTTTTGCTGGTGTGT+GGG - Chr2:81065748-81065767 MsG0280011217.01.T01:intron 30.0%
!!! TTTAATTTTTTGCTGGTGTG+TGG - Chr2:81065747-81065766 MsG0280011217.01.T01:intron 30.0%
AAAAGTTATTGGCGCGATAA+CGG - Chr2:81064495-81064514 MsG0280011217.01.T01:intron 35.0%
AACATTGTTAAGTGTATGGC+AGG - Chr2:81064231-81064250 MsG0280011217.01.T01:CDS 35.0%
ACCGTCTGTTATAGGATTAT+AGG - Chr2:81065387-81065406 MsG0280011217.01.T01:intron 35.0%
AGCCAAAGTTAATGTGTCAA+CGG - Chr2:81062771-81062790 MsG0280011217.01.T01:intron 35.0%
ATAACTTTATTCTGCTGCTG+TGG - Chr2:81065225-81065244 MsG0280011217.01.T01:intron 35.0%
ATAAGTGGCCTTTACAACAT+AGG - Chr2:81064304-81064323 MsG0280011217.01.T01:CDS 35.0%
ATACCACGTAGTTTATCTTC+AGG + Chr2:81063169-81063188 None:intergenic 35.0%
ATCAAACAGTTATGCAGCTA+TGG - Chr2:81064096-81064115 MsG0280011217.01.T01:intron 35.0%
ATGAAGGAAATGGAAGTTGA+GGG - Chr2:81063738-81063757 MsG0280011217.01.T01:intron 35.0%
ATGAAGTCATGTGACATTTG+CGG + Chr2:81064906-81064925 None:intergenic 35.0%
ATTGAAACCGTAACAGATCT+TGG - Chr2:81066039-81066058 MsG0280011217.01.T01:intron 35.0%
ATTGGAGTGCAAGATATCAA+TGG - Chr2:81064161-81064180 MsG0280011217.01.T01:CDS 35.0%
ATTTCAAATGGAGTCCCTTA+GGG - Chr2:81065537-81065556 MsG0280011217.01.T01:intron 35.0%
CAAGTTGTCCTATGTTGTAA+AGG + Chr2:81064315-81064334 None:intergenic 35.0%
CATGTCAGAAATCTTGCTTA+TGG + Chr2:81065995-81066014 None:intergenic 35.0%
CCAGAAAGATAATAACTAGC+CGG + Chr2:81065310-81065329 None:intergenic 35.0%
CCGAGGAAATCTAAAAACTT+CGG - Chr2:81061855-81061874 MsG0280011217.01.T01:intron 35.0%
CTTATGCGTCTTTCTAAGTT+TGG - Chr2:81064199-81064218 MsG0280011217.01.T01:CDS 35.0%
GAAAGTTGAAACACATAGGT+AGG - Chr2:81065351-81065370 MsG0280011217.01.T01:intron 35.0%
GAGAAACGTTGATGTAATTG+GGG + Chr2:81063016-81063035 None:intergenic 35.0%
GATAACCTTGTTGAATAGGT+AGG - Chr2:81065091-81065110 MsG0280011217.01.T01:intron 35.0%
GCATGGTATTTGCATATTAC+TGG - Chr2:81065514-81065533 MsG0280011217.01.T01:intron 35.0%
GTGGAACATTGTTAAGTGTA+TGG - Chr2:81064227-81064246 MsG0280011217.01.T01:CDS 35.0%
GTTTACGAGTACATCATAAG+TGG - Chr2:81064289-81064308 MsG0280011217.01.T01:CDS 35.0%
TAACTGCCGAATTATGAAAC+CGG - Chr2:81061793-81061812 MsG0280011217.01.T01:intron 35.0%
TACCACGTAGTTTATCTTCA+GGG + Chr2:81063168-81063187 None:intergenic 35.0%
TAGATCATCATAGCTGCATA+TGG + Chr2:81064126-81064145 None:intergenic 35.0%
TAGCTTCTTGTAGCTAAGAA+AGG + Chr2:81064986-81065005 None:intergenic 35.0%
TAGGAAAAGAAACACAGAAG+TGG + Chr2:81065274-81065293 None:intergenic 35.0%
TATGAAGGAAATGGAAGTTG+AGG - Chr2:81063737-81063756 MsG0280011217.01.T01:intron 35.0%
TCAAACCTACCTATTCAACA+AGG + Chr2:81065099-81065118 None:intergenic 35.0%
TCTAGTGACATTGGTATAAG+TGG - Chr2:81061661-81061680 MsG0280011217.01.T01:intron 35.0%
TGAAAATGCTGTTCTTGTCA+TGG - Chr2:81064333-81064352 MsG0280011217.01.T01:CDS 35.0%
TTGACACATTAACTTTGGCT+AGG + Chr2:81062771-81062790 None:intergenic 35.0%
TTTGATGAGATGTTAAGGCA+AGG - Chr2:81064039-81064058 MsG0280011217.01.T01:intron 35.0%
TTTGGGAATTTGGATGATCT+CGG - Chr2:81063534-81063553 MsG0280011217.01.T01:CDS 35.0%
! AAAAGACGTTTTTACCCCTT+CGG - Chr2:81061766-81061785 MsG0280011217.01.T01:intron 35.0%
! AAAAGACGTTTTTACCCCTT+CGG + Chr2:81061785-81061766 None:intergenic 35.0%
! ACAGAATGGCAGCTAATTTT+AGG - Chr2:81065924-81065943 MsG0280011217.01.T01:intron 35.0%
! ATCAAACCGGAATTTTACAG+GGG - Chr2:81061552-81061571 MsG0280011217.01.T01:intron 35.0%
! ATGAAAGAGAAAGTGTAGAG+TGG - Chr2:81061270-81061289 MsG0280011217.01.T01:CDS 35.0%
! CGGCTAGTTATTATCTTTCT+GGG - Chr2:81065308-81065327 MsG0280011217.01.T01:intron 35.0%
! TACAAGGGCATAAATCAAAC+CGG - Chr2:81061539-81061558 MsG0280011217.01.T01:intron 35.0%
! TGAAAGAGAAAGTGTAGAGT+GGG - Chr2:81061271-81061290 MsG0280011217.01.T01:CDS 35.0%
! TTCCTATCTTTTTGCACTTC+CGG - Chr2:81065288-81065307 MsG0280011217.01.T01:intron 35.0%
!! AATTGCTTTTGACACATGAC+CGG + Chr2:81063508-81063527 None:intergenic 35.0%
!! ATAATGTTGTTGTTGGTGGT+TGG - Chr2:81063680-81063699 MsG0280011217.01.T01:intron 35.0%
!! CAATGATTACTGCTTTTCTC+AGG - Chr2:81063986-81064005 MsG0280011217.01.T01:CDS 35.0%
!! CCGAAGTTTTTAGATTTCCT+CGG + Chr2:81061858-81061877 None:intergenic 35.0%
!! GCATTTTAACAAACACCTGT+TGG - Chr2:81062856-81062875 MsG0280011217.01.T01:intron 35.0%
!!! GTTGGTTTTTCTGTGGATTT+AGG - Chr2:81065019-81065038 MsG0280011217.01.T01:intron 35.0%
!!! TAATTTTTTGCTGGTGTGTG+GGG - Chr2:81065749-81065768 MsG0280011217.01.T01:intron 35.0%
!!! TGATTGTGATTCTGAGGTTT+TGG + Chr2:81063116-81063135 None:intergenic 35.0%
!!! TTTCGCGTTTTTTAGTGAAC+GGG + Chr2:81064478-81064497 None:intergenic 35.0%
AAATGCTGTTCTTGTCATGG+AGG - Chr2:81064336-81064355 MsG0280011217.01.T01:CDS 40.0%
AATTGAATGAGTGGCGAAAG+AGG - Chr2:81061207-81061226 MsG0280011217.01.T01:CDS 40.0%
ACCACGTAGTTTATCTTCAG+GGG + Chr2:81063167-81063186 None:intergenic 40.0%
ACGATGGCTTTCTTTCTTGA+GGG - Chr2:81063780-81063799 MsG0280011217.01.T01:intron 40.0%
ATATATGCCGTGATCCCTAA+GGG + Chr2:81065554-81065573 None:intergenic 40.0%
ATCATCATAGCTGCATATGG+TGG + Chr2:81064123-81064142 None:intergenic 40.0%
ATGACAGGATTCCAACAAGA+TGG - Chr2:81065954-81065973 MsG0280011217.01.T01:intron 40.0%
ATTGAATGAGTGGCGAAAGA+GGG - Chr2:81061208-81061227 MsG0280011217.01.T01:CDS 40.0%
CAGAATCCAAATCCGTTGAT+GGG - Chr2:81063134-81063153 MsG0280011217.01.T01:CDS 40.0%
CCGAGGAAATCTGAAAACTT+CGG + Chr2:81062651-81062670 None:intergenic 40.0%
CTAGTGCCTTAACAATGACA+TGG + Chr2:81063374-81063393 None:intergenic 40.0%
CTTCTTAGGAGTTAGGACAT+GGG - Chr2:81064843-81064862 MsG0280011217.01.T01:intron 40.0%
GAACGACACACTTACAAACT+CGG - Chr2:81066077-81066096 MsG0280011217.01.T01:intron 40.0%
GAGAGATTTGATGGAGAATG+AGG + Chr2:81063072-81063091 None:intergenic 40.0%
GATTTCAAATGGAGTCCCTT+AGG - Chr2:81065536-81065555 MsG0280011217.01.T01:intron 40.0%
GCAATATGGGAATCCTTCTT+AGG - Chr2:81064829-81064848 MsG0280011217.01.T01:intron 40.0%
GCATAACTGTTTGATGAAGG+AGG + Chr2:81064091-81064110 None:intergenic 40.0%
GCTGCATAACTGTTTGATGA+AGG + Chr2:81064094-81064113 None:intergenic 40.0%
GCTTTCTTTCTTGAGGGTTT+GGG - Chr2:81063786-81063805 MsG0280011217.01.T01:intron 40.0%
GGATTCTGATTGTGATTCTG+AGG + Chr2:81063122-81063141 None:intergenic 40.0%
GTTAACTACCGAGGAAACTT+CGG + Chr2:81062684-81062703 None:intergenic 40.0%
GTTGATGTAATTGGGGAAGA+GGG + Chr2:81063009-81063028 None:intergenic 40.0%
TAAACAACCAATGGTGCCTA+GGG - Chr2:81063335-81063354 MsG0280011217.01.T01:CDS 40.0%
TACGATGGCTTTCTTTCTTG+AGG - Chr2:81063779-81063798 MsG0280011217.01.T01:intron 40.0%
TAGAATGAATGAGGCTGTTG+AGG - Chr2:81063818-81063837 MsG0280011217.01.T01:intron 40.0%
TAGAGCAGGTAGAATGAATG+AGG - Chr2:81063809-81063828 MsG0280011217.01.T01:intron 40.0%
TATAACAGACGGTACTTCCA+TGG + Chr2:81065380-81065399 None:intergenic 40.0%
TCAGAATCCAAATCCGTTGA+TGG - Chr2:81063133-81063152 MsG0280011217.01.T01:CDS 40.0%
TGAAGGAAATGGAAGTTGAG+GGG - Chr2:81063739-81063758 MsG0280011217.01.T01:intron 40.0%
TGCCGTTGACACATTAACTT+TGG + Chr2:81062776-81062795 None:intergenic 40.0%
TGCTTCAAACCTAACAGAGA+GGG - Chr2:81064423-81064442 MsG0280011217.01.T01:CDS 40.0%
TTAAACAACCAATGGTGCCT+AGG - Chr2:81063334-81063353 MsG0280011217.01.T01:CDS 40.0%
TTACTGTATACAAGCCTGCT+GGG + Chr2:81064385-81064404 None:intergenic 40.0%
TTGCATGGTATCCATCTTGT+TGG + Chr2:81065968-81065987 None:intergenic 40.0%
TTGCTTCAAACCTAACAGAG+AGG - Chr2:81064422-81064441 MsG0280011217.01.T01:CDS 40.0%
TTGGGAATTTGGATGATCTC+GGG - Chr2:81063535-81063554 MsG0280011217.01.T01:CDS 40.0%
TTGGGCACTTAAACAACCAA+TGG - Chr2:81063326-81063345 MsG0280011217.01.T01:CDS 40.0%
TTTACTGTATACAAGCCTGC+TGG + Chr2:81064386-81064405 None:intergenic 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG - Chr2:81062615-81062634 MsG0280011217.01.T01:intron 40.0%
! AAACAGGTTTGAGGTTTCCT+CGG + Chr2:81062634-81062615 None:intergenic 40.0%
! AATGAGGCTGTTGAGGTTTT+CGG - Chr2:81063825-81063844 MsG0280011217.01.T01:intron 40.0%
! ACTGCAGCCGGTTTATAATT+CGG - Chr2:81062702-81062721 MsG0280011217.01.T01:intron 40.0%
! CAAAAACCCATCAACGGATT+TGG + Chr2:81063143-81063162 None:intergenic 40.0%
! CAAAAGCACATTCAAAGCCT+CGG + Chr2:81063573-81063592 None:intergenic 40.0%
! CATGTCATTGTTAAGGCACT+AGG - Chr2:81063372-81063391 MsG0280011217.01.T01:CDS 40.0%
! CCGAAGTTTTCAGATTTCCT+CGG - Chr2:81062648-81062667 MsG0280011217.01.T01:intron 40.0%
! CCGGCTAGTTATTATCTTTC+TGG - Chr2:81065307-81065326 MsG0280011217.01.T01:intron 40.0%
! CTTTTGAGCAGACATCAAAC+TGG - Chr2:81064524-81064543 MsG0280011217.01.T01:intron 40.0%
! GGTTTTACACCTACCTTCAA+AGG - Chr2:81066147-81066166 MsG0280011217.01.T01:intron 40.0%
! TGAGGTTTTCGGTAGTATGA+AGG - Chr2:81063836-81063855 MsG0280011217.01.T01:intron 40.0%
! TGCTGTTGACACATTAGCTT+TGG - Chr2:81061728-81061747 MsG0280011217.01.T01:intron 40.0%
! TTAACTGCCGAAGTTTTCCT+TGG + Chr2:81061832-81061851 None:intergenic 40.0%
! TTGAACTTTGGGAATTTGGG+TGG - Chr2:81063280-81063299 MsG0280011217.01.T01:CDS 40.0%
! TTGTTAAGGCACTAGGAAGA+AGG - Chr2:81063379-81063398 MsG0280011217.01.T01:CDS 40.0%
!! ATGGAAGTACCGTCTGTTAT+AGG - Chr2:81065379-81065398 MsG0280011217.01.T01:intron 40.0%
!! GAGATTTAGTGTTGCTTTGC+TGG - Chr2:81065674-81065693 MsG0280011217.01.T01:intron 40.0%
!! TTGACACATTAGCTTTGGCT+AGG - Chr2:81061733-81061752 MsG0280011217.01.T01:intron 40.0%
!! TTTAGTGTTGCTTTGCTGGT+TGG - Chr2:81065678-81065697 MsG0280011217.01.T01:intron 40.0%
!!! CAGCTTTTTCATCCAAGAAC+GGG + Chr2:81066128-81066147 None:intergenic 40.0%
!!! CCAGCTTTTTCATCCAAGAA+CGG + Chr2:81066129-81066148 None:intergenic 40.0%
!!! GATTCTGAGGTTTTGGAAGT+GGG + Chr2:81063109-81063128 None:intergenic 40.0%
!!! TGATTCTGAGGTTTTGGAAG+TGG + Chr2:81063110-81063129 None:intergenic 40.0%
AACACATAGGTAGGTTGCCA+TGG - Chr2:81065360-81065379 MsG0280011217.01.T01:intron 45.0%
AAGGAGGTTATAGTCCCAGT+AGG + Chr2:81064075-81064094 None:intergenic 45.0%
AAGTCATGTGACATTTGCGG+AGG + Chr2:81064903-81064922 None:intergenic 45.0%
ACTAGATCCGTAATGTTGCG+AGG + Chr2:81064607-81064626 None:intergenic 45.0%
ACTCAGCAAATCAGCCTATG+TGG + Chr2:81061484-81061503 None:intergenic 45.0%
AGCATTCAGAAGAACCCAAC+AGG + Chr2:81062874-81062893 None:intergenic 45.0%
AGGGGACAAAAACCCATCAA+CGG + Chr2:81063149-81063168 None:intergenic 45.0%
ATGGTGAAGTGCAAGATCGA+TGG - Chr2:81061236-81061255 MsG0280011217.01.T01:CDS 45.0%
ATTCGGCAGTTAACTACCGA+AGG - Chr2:81062719-81062738 MsG0280011217.01.T01:intron 45.0%
ATTCGGCAGTTAACTACCGA+AGG + Chr2:81062738-81062719 None:intergenic 45.0%
CAAGATCGATGGAGAAGAAG+AGG - Chr2:81061247-81061266 MsG0280011217.01.T01:CDS 45.0%
CCACATGACAACGTTGACAA+AGG + Chr2:81063601-81063620 None:intergenic 45.0%
CCATGTCCTAACTCCTAAGA+AGG + Chr2:81064845-81064864 None:intergenic 45.0%
CCGTTCTTGGATGAAAAAGC+TGG - Chr2:81066126-81066145 MsG0280011217.01.T01:intron 45.0%
CCTTCTTAGGAGTTAGGACA+TGG - Chr2:81064842-81064861 MsG0280011217.01.T01:intron 45.0%
CCTTTGTCAACGTTGTCATG+TGG - Chr2:81063598-81063617 MsG0280011217.01.T01:CDS 45.0%
CGTTGATGTAATTGGGGAAG+AGG + Chr2:81063010-81063029 None:intergenic 45.0%
CTTGCTTATGGAAGCTTGCA+TGG + Chr2:81065983-81066002 None:intergenic 45.0%
GAATTTGGGTGGTGAAGCAA+TGG - Chr2:81063291-81063310 MsG0280011217.01.T01:CDS 45.0%
GATATATGCCGTGATCCCTA+AGG + Chr2:81065555-81065574 None:intergenic 45.0%
GCTACTTCCTCGCAACATTA+CGG - Chr2:81064597-81064616 MsG0280011217.01.T01:intron 45.0%
GGCTTTCTTTCTTGAGGGTT+TGG - Chr2:81063785-81063804 MsG0280011217.01.T01:intron 45.0%
GGGAATCCTTCTTAGGAGTT+AGG - Chr2:81064836-81064855 MsG0280011217.01.T01:intron 45.0%
GTTAACTGCCGAAGTTTCCT+CGG - Chr2:81062673-81062692 MsG0280011217.01.T01:intron 45.0%
TACACCTACCTTCAAAGGCA+CGG - Chr2:81066152-81066171 MsG0280011217.01.T01:intron 45.0%
TATTGGATCCGTGCCTTTGA+AGG + Chr2:81066163-81066182 None:intergenic 45.0%
TCCCCTGAAGATAAACTACG+TGG - Chr2:81063163-81063182 MsG0280011217.01.T01:CDS 45.0%
TGCTGGTCCAAGATCTGTTA+CGG + Chr2:81066049-81066068 None:intergenic 45.0%
TGGTAACTACCAACATCCCT+AGG + Chr2:81063354-81063373 None:intergenic 45.0%
TTCGGCAGTTAACTACCGAA+GGG - Chr2:81062720-81062739 MsG0280011217.01.T01:intron 45.0%
TTCGGCAGTTAACTACCGAA+GGG + Chr2:81062739-81062720 None:intergenic 45.0%
TTTCCGCCCCTGTAAAATTC+CGG + Chr2:81061561-81061580 None:intergenic 45.0%
! AAACCGGAATTTTACAGGGG+CGG - Chr2:81061555-81061574 MsG0280011217.01.T01:intron 45.0%
! AGCCGGAAGTGCAAAAAGAT+AGG + Chr2:81065293-81065312 None:intergenic 45.0%
! CTGCAGCCGGTTTCATAATT+CGG + Chr2:81061802-81061821 None:intergenic 45.0%
! TCAAAGGCACGGATCCAATA+GGG - Chr2:81066163-81066182 MsG0280011217.01.T01:CDS 45.0%
! TTCAAAGGCACGGATCCAAT+AGG - Chr2:81066162-81066181 MsG0280011217.01.T01:CDS 45.0%
! TTTTCATCCAAGAACGGGTC+TGG + Chr2:81066123-81066142 None:intergenic 45.0%
! TTTTCTCAGGACCAGGAAAG+TGG - Chr2:81063999-81064018 MsG0280011217.01.T01:intron 45.0%
!! AACTGGAAAAGGGTGTCAAG+AGG + Chr2:81065577-81065596 None:intergenic 45.0%
!! CATAGGCTGATTTGCTGAGT+TGG - Chr2:81061484-81061503 MsG0280011217.01.T01:intron 45.0%
!! GTTGGTGGTTGGTCTAAGTT+GGG - Chr2:81063691-81063710 MsG0280011217.01.T01:intron 45.0%
!! TAATTGGGGAAGAGGGTGTT+TGG + Chr2:81063002-81063021 None:intergenic 45.0%
!! TGGTTGGTCTAAGTTGGGTA+GGG - Chr2:81063696-81063715 MsG0280011217.01.T01:intron 45.0%
!! TGTTGGTGGTTGGTCTAAGT+TGG - Chr2:81063690-81063709 MsG0280011217.01.T01:intron 45.0%
!! TTACTGCTTTTCTCAGGACC+AGG - Chr2:81063992-81064011 MsG0280011217.01.T01:CDS 45.0%
!!! GAGGTTTTGGAAGTGGGTAT+TGG + Chr2:81063103-81063122 None:intergenic 45.0%
!! TAAAGAATTAAATTTAATTA+AGG - Chr2:81062546-81062565 MsG0280011217.01.T01:intron 5.0%
!! TAAAGAATTAAATTTAATTA+AGG + Chr2:81062565-81062546 None:intergenic 5.0%
!! TTTAATTCTTTAATTATTTA+AGG + Chr2:81062538-81062557 None:intergenic 5.0%
AAGGAGTTGTGCCTCCTACT+GGG - Chr2:81064058-81064077 MsG0280011217.01.T01:intron 50.0%
ACCTAACAGAGAGGGCTTAC+AGG - Chr2:81064431-81064450 MsG0280011217.01.T01:CDS 50.0%
ATGGAGTCCCTTAGGGATCA+CGG - Chr2:81065544-81065563 MsG0280011217.01.T01:intron 50.0%
CAAGCTGCAACGCGCAATTA+GGG + Chr2:81065426-81065445 None:intergenic 50.0%
GAGGTTATAGTCCCAGTAGG+AGG + Chr2:81064072-81064091 None:intergenic 50.0%
GGCAGGAGATGCAAGAATGT+GGG - Chr2:81064248-81064267 MsG0280011217.01.T01:CDS 50.0%
GTGGCGAAAGAGGGTGAAAA+TGG - Chr2:81061217-81061236 MsG0280011217.01.T01:CDS 50.0%
TCAAGCTGCAACGCGCAATT+AGG + Chr2:81065427-81065446 None:intergenic 50.0%
TCGGCAGTTAACTACCGAAG+GGG - Chr2:81062721-81062740 MsG0280011217.01.T01:intron 50.0%
TCGGCAGTTAACTACCGAAG+GGG + Chr2:81062740-81062721 None:intergenic 50.0%
TGATGATCCAGACCCGTTCT+TGG - Chr2:81066113-81066132 MsG0280011217.01.T01:intron 50.0%
TGCTGTTCTTGTCATGGAGG+AGG - Chr2:81064339-81064358 MsG0280011217.01.T01:CDS 50.0%
TGGCAGGAGATGCAAGAATG+TGG - Chr2:81064247-81064266 MsG0280011217.01.T01:CDS 50.0%
! CCTTGGTAGTTAACTGCAGC+CGG + Chr2:81061815-81061834 None:intergenic 50.0%
! GGAGAATGAGGCGTTCATCA+AGG + Chr2:81063060-81063079 None:intergenic 50.0%
! GTGTCGTTCTTCTTGACTGC+TGG + Chr2:81066066-81066085 None:intergenic 50.0%
! GTTATTGGCGCGATAACGGT+TGG - Chr2:81064499-81064518 MsG0280011217.01.T01:intron 50.0%
! TTGCTGAGTTGGAGGGAAGA+GGG - Chr2:81061495-81061514 MsG0280011217.01.T01:intron 50.0%
! TTTGCTGAGTTGGAGGGAAG+AGG - Chr2:81061494-81061513 MsG0280011217.01.T01:intron 50.0%
! TTTTTGCTGGTGTGTGGGGA+TGG - Chr2:81065753-81065772 MsG0280011217.01.T01:intron 50.0%
!! AGGCTGATTTGCTGAGTTGG+AGG - Chr2:81061487-81061506 MsG0280011217.01.T01:intron 50.0%
!! GGCTGATTTGCTGAGTTGGA+GGG - Chr2:81061488-81061507 MsG0280011217.01.T01:intron 50.0%
!! GTGGTTGGTCTAAGTTGGGT+AGG - Chr2:81063695-81063714 MsG0280011217.01.T01:intron 50.0%
ACTTCGGCAGTTAACTGCCG+AGG - Chr2:81061838-81061857 MsG0280011217.01.T01:intron 55.0%
ACTTCGGCAGTTAACTGCCG+AGG + Chr2:81061857-81061838 None:intergenic 55.0%
ATGGAGGAGGCTTTGCGCAA+AGG - Chr2:81064352-81064371 MsG0280011217.01.T01:CDS 55.0%
ATTCCATGCCAGCGCCACAT+AGG - Chr2:81061467-81061486 MsG0280011217.01.T01:intron 55.0%
CAAATCAGCCTATGTGGCGC+TGG + Chr2:81061478-81061497 None:intergenic 55.0%
CAAGGAGTTGTGCCTCCTAC+TGG - Chr2:81064057-81064076 MsG0280011217.01.T01:intron 55.0%
CACGGATCCAATAGGGTTGC+TGG - Chr2:81066170-81066189 MsG0280011217.01.T01:CDS 55.0%
CCAACATCCCTAGGCACCAT+TGG + Chr2:81063345-81063364 None:intergenic 55.0%
CCAATGGTGCCTAGGGATGT+TGG - Chr2:81063342-81063361 MsG0280011217.01.T01:CDS 55.0%
CCGGCTGCAGTTAACTACCA+AGG - Chr2:81061812-81061831 MsG0280011217.01.T01:intron 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - Chr2:81062690-81062709 MsG0280011217.01.T01:intron 55.0%
CTTGAGGGTTTGGGTAGAGC+AGG - Chr2:81063795-81063814 MsG0280011217.01.T01:intron 55.0%
GCCTGTAAGCCCTCTCTGTT+AGG + Chr2:81064435-81064454 None:intergenic 55.0%
GGAGGGAAGAGGGTGGTATT+CGG - Chr2:81061505-81061524 MsG0280011217.01.T01:intron 55.0%
GTGAGAGCCAGCAACCCTAT+TGG + Chr2:81066180-81066199 None:intergenic 55.0%
TGGAGGAGGCTTTGCGCAAA+GGG - Chr2:81064353-81064372 MsG0280011217.01.T01:CDS 55.0%
! AAGTGCATCGGCCACTTTCC+TGG + Chr2:81064013-81064032 None:intergenic 55.0%
! GGATCCGTGCCTTTGAAGGT+AGG + Chr2:81066159-81066178 None:intergenic 55.0%
!! GTCATGTGGTGCTGCAGCTT+CGG - Chr2:81063612-81063631 MsG0280011217.01.T01:intron 55.0%
CCGGCTGCAGTTAACTACCG+AGG + Chr2:81062693-81062712 None:intergenic 60.0%
GCAAAGGGTTCTGTCCCAGC+AGG - Chr2:81064368-81064387 MsG0280011217.01.T01:CDS 60.0%
TCGGGTGTGTCGTGATACCG+AGG - Chr2:81063553-81063572 MsG0280011217.01.T01:CDS 60.0%
! CTGAGTTGGAGGGAAGAGGG+TGG - Chr2:81061498-81061517 MsG0280011217.01.T01:intron 60.0%
!! CAGCCTATGTGGCGCTGGCA+TGG + Chr2:81061473-81061492 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 81061200 81066242 81061200 ID=MsG0280011217.01;Name=MsG0280011217.01
Chr2 mRNA 81061200 81066242 81061200 ID=MsG0280011217.01.T01;Parent=MsG0280011217.01;Name=MsG0280011217.01.T01;_AED=0.56;_eAED=0.57;_QI=0|0|0|0.71|1|1|7|0|433
Chr2 exon 81066154 81066242 81066154 ID=MsG0280011217.01.T01:exon:11989;Parent=MsG0280011217.01.T01
Chr2 exon 81064130 81064508 81064130 ID=MsG0280011217.01.T01:exon:11988;Parent=MsG0280011217.01.T01
Chr2 exon 81063886 81064016 81063886 ID=MsG0280011217.01.T01:exon:11987;Parent=MsG0280011217.01.T01
Chr2 exon 81063520 81063630 81063520 ID=MsG0280011217.01.T01:exon:11986;Parent=MsG0280011217.01.T01
Chr2 exon 81063276 81063434 81063276 ID=MsG0280011217.01.T01:exon:11985;Parent=MsG0280011217.01.T01
Chr2 exon 81063049 81063199 81063049 ID=MsG0280011217.01.T01:exon:11984;Parent=MsG0280011217.01.T01
Chr2 exon 81061200 81061481 81061200 ID=MsG0280011217.01.T01:exon:11983;Parent=MsG0280011217.01.T01
Chr2 CDS 81066154 81066242 81066154 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81064130 81064508 81064130 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81063886 81064016 81063886 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81063520 81063630 81063520 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81063276 81063434 81063276 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81063049 81063199 81063049 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Chr2 CDS 81061200 81061481 81061200 ID=MsG0280011217.01.T01:cds;Parent=MsG0280011217.01.T01
Gene Sequence

>MsG0280011217.01.T01

ATGGTGAAATTGAATGAGTGGCGAAAGAGGGTGAAAATGGTGAAGTGCAAGATCGATGGAGAAGAAGAGGATGAAAGAGAAAGTGTAGATTTCTGTGATTATTACATTCTTCATGGCGTTTCGATTTTTGCAATTCGTGCTTCACTTCTCAAAACCAAACACCCTCTTCCCCAATTACATCAACGTTTCTCATCGCTACAAAATTCTTCAAACCTTGATGAACGCCTCATTCTCCATCAAATCTCTCAACTTTTACCAATACCCACTTCCAAAACCTCAGAATCACAATCAGAATCCAAATCCGTTGATGGGTTTTTGTCCCCTGAAGATAAACTACGTGGTATCTTTCTTCAAAAACTAAAGGGTAAGGCTGCAATTGAACAAGCTTTATCCAATGTGTGTATTGATGTAAATGTTGATATTATTGGTAAAGTATTGAACTTTGGGAATTTGGGTGGTGAAGCAATGGTTTTAGATGAGATGAGATTGAATGGTGTGAAAGCTGATTTGTTAATGTTATCTATTGTTATTGATAGTTTTGTCAATGCCGGTCATGTGTCAAAAGCAATTCAGTTGTTTGGGAATTTGGATGATCTCGGAGCAGGTAGAATGAATGAGGCTGTTGAGGTTTTCGGTAGTATGAAGGAGAAAGACACTGCTATCTATAATGCAATGATTTTTAATTTCATTTCGATTGGAGATTTTGATGGGACCAGGAAAGTGGCCGATGCACTTTTGATGTTTGATGAGATGTTAAGGCAAGGAGTTGTGCCTCCTACTGGGACTATAACCTCCTTCATCAAACAGTTATGCAGCTATGGTCCACCATATGCAGCTATGATGATCTACAAGAAGACAAGAAAATTGGATGTATGGCAGGAGATGCAAGAATGTGGGTATAGTTCAGATGTTGAAGTTTACGAGTACATCATAAGTGGCCTTTACAACATAGGACAACTTGAAAATGCTGTTCTTGTCATGGAGGAGGCTTTGCGCAAAGGGTTCTGTCCCAGCAGGCTTGATTCCAACAAGATGGATACCATGCAAGCTTCCATAAGCAAGATTTCTGACATGATCTCAAATCTTCAGCACAAAAACATTGAAACCGTAACAGATCTTGGACCAGCAGTCAAGAAGAACGACACACTTACAAACTCGGATCGAGATTCAGATGATGATCCAGACCCGTTCTTGGATGAAAAAGCTGGTTTTACACCTACCTTCAAAGGCACGGATCCAATAGGGTTGCTGGCTCTCACTGACAAATTATCGCTGTGCAGAAAGTCGAACCTTCAAAGCTGA

Protein sequence

>MsG0280011217.01.T01

MVKLNEWRKRVKMVKCKIDGEEEDERESVDFCDYYILHGVSIFAIRASLLKTKHPLPQLHQRFSSLQNSSNLDERLILHQISQLLPIPTSKTSESQSESKSVDGFLSPEDKLRGIFLQKLKGKAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVLDEMRLNGVKADLLMLSIVIDSFVNAGHVSKAIQLFGNLDDLGAGRMNEAVEVFGSMKEKDTAIYNAMIFNFISIGDFDGTRKVADALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKLDVWQEMQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGFCPSRLDSNKMDTMQASISKISDMISNLQHKNIETVTDLGPAVKKNDTLTNSDRDSDDDPDPFLDEKAGFTPTFKGTDPIGLLALTDKLSLCRKSNLQS*