Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015589.01.T01 | XP_003601098.1 | 91.544 | 272 | 3 | 1 | 62 | 333 | 34 | 285 | 8.20E-178 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015589.01.T01 | Q9SL92 | 59.661 | 295 | 95 | 4 | 41 | 333 | 20 | 292 | 1.47E-117 | 347 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015589.01.T01 | G7J3L5 | 91.544 | 272 | 3 | 1 | 62 | 333 | 34 | 285 | 3.92e-178 | 507 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048769.01 | MsG0380015589.01 | 0.819925 | 8.988534e-53 | 7.011867e-50 |
| MsG0080048787.01 | MsG0380015589.01 | 0.801602 | 8.334018e-49 | 3.996306e-46 |
| MsG0180000091.01 | MsG0380015589.01 | 0.812989 | 3.212407e-51 | 2.072360e-48 |
| MsG0180000145.01 | MsG0380015589.01 | 0.829705 | 4.432694e-55 | 4.572663e-52 |
| MsG0180000402.01 | MsG0380015589.01 | 0.800224 | 1.593527e-48 | 7.379596e-46 |
| MsG0180000470.01 | MsG0380015589.01 | 0.820823 | 5.594739e-53 | 4.474498e-50 |
| MsG0180000702.01 | MsG0380015589.01 | 0.819527 | 1.108632e-52 | 8.552761e-50 |
| MsG0180000741.01 | MsG0380015589.01 | 0.803583 | 3.253381e-49 | 1.641100e-46 |
| MsG0180001892.01 | MsG0380015589.01 | 0.826661 | 2.400621e-54 | 2.265684e-51 |
| MsG0180002071.01 | MsG0380015589.01 | 0.816316 | 5.889470e-52 | 4.159445e-49 |
| MsG0180002282.01 | MsG0380015589.01 | 0.821132 | 4.749655e-53 | 3.831495e-50 |
| MsG0180002952.01 | MsG0380015589.01 | 0.835262 | 1.859133e-56 | 2.261623e-53 |
| MsG0180003673.01 | MsG0380015589.01 | 0.805735 | 1.156401e-49 | 6.165281e-47 |
| MsG0180003686.01 | MsG0380015589.01 | 0.812422 | 4.274806e-51 | 2.716939e-48 |
| MsG0180004157.01 | MsG0380015589.01 | 0.801304 | 9.589939e-49 | 4.564402e-46 |
| MsG0180004465.01 | MsG0380015589.01 | 0.806512 | 7.934880e-50 | 4.314979e-47 |
| MsG0180004486.01 | MsG0380015589.01 | 0.820806 | 5.646759e-53 | 4.513999e-50 |
| MsG0180004620.01 | MsG0380015589.01 | 0.802011 | 6.867079e-49 | 3.327429e-46 |
| MsG0180005185.01 | MsG0380015589.01 | 0.827240 | 1.744798e-54 | 1.674835e-51 |
| MsG0180005205.01 | MsG0380015589.01 | 0.801387 | 9.221353e-49 | 4.398141e-46 |
| MsG0180005732.01 | MsG0380015589.01 | 0.804466 | 2.131146e-49 | 1.099593e-46 |
| MsG0180006054.01 | MsG0380015589.01 | 0.810579 | 1.074627e-50 | 6.502024e-48 |
| MsG0280010598.01 | MsG0380015589.01 | 0.802070 | 6.678151e-49 | 3.240825e-46 |
| MsG0280010599.01 | MsG0380015589.01 | 0.807062 | 6.072147e-50 | 3.349162e-47 |
| MsG0280010698.01 | MsG0380015589.01 | 0.807534 | 4.824033e-50 | 2.693565e-47 |
| MsG0280010722.01 | MsG0380015589.01 | 0.805515 | 1.286373e-49 | 6.818743e-47 |
| MsG0280010796.01 | MsG0380015589.01 | 0.804716 | 1.889686e-49 | 9.813941e-47 |
| MsG0280010916.01 | MsG0380015589.01 | 0.800550 | 1.367502e-48 | 6.385437e-46 |
| MsG0280011334.01 | MsG0380015589.01 | 0.804888 | 1.739791e-49 | 9.076297e-47 |
| MsG0380011755.01 | MsG0380015589.01 | 0.801023 | 1.094829e-48 | 5.174398e-46 |
| MsG0380012067.01 | MsG0380015589.01 | 0.831212 | 1.896820e-55 | 2.044560e-52 |
| MsG0380012085.01 | MsG0380015589.01 | 0.829049 | 6.397658e-55 | 6.472679e-52 |
| MsG0380012091.01 | MsG0380015589.01 | 0.817417 | 3.334509e-52 | 2.427008e-49 |
| MsG0380012103.01 | MsG0380015589.01 | 0.800071 | 1.711404e-48 | 7.894939e-46 |
| MsG0380012365.01 | MsG0380015589.01 | 0.833371 | 5.541097e-56 | 6.368868e-53 |
| MsG0380013363.01 | MsG0380015589.01 | 0.817221 | 3.690196e-52 | 2.671421e-49 |
| MsG0380014251.01 | MsG0380015589.01 | 0.805712 | 1.169549e-49 | 6.231596e-47 |
| MsG0380014468.01 | MsG0380015589.01 | 0.811024 | 8.611199e-51 | 5.272780e-48 |
| MsG0380014701.01 | MsG0380015589.01 | 0.832131 | 1.126194e-55 | 1.247304e-52 |
| MsG0380014706.01 | MsG0380015589.01 | 0.806550 | 7.791477e-50 | 4.241159e-47 |
| MsG0380014948.01 | MsG0380015589.01 | 0.806681 | 7.310020e-50 | 3.992211e-47 |
| MsG0380015039.01 | MsG0380015589.01 | 0.809255 | 2.071486e-50 | 1.210309e-47 |
| MsG0380015332.01 | MsG0380015589.01 | 0.824420 | 8.149007e-54 | 7.213850e-51 |
| MsG0380015589.01 | MsG0380015677.01 | 0.808793 | 2.600897e-50 | 1.500928e-47 |
| MsG0380015589.01 | MsG0380015980.01 | 0.804756 | 1.853721e-49 | 9.637145e-47 |
| MsG0380015589.01 | MsG0380016064.01 | 0.801818 | 7.523258e-49 | 3.627611e-46 |
| MsG0380015589.01 | MsG0380016387.01 | 0.819036 | 1.434288e-52 | 1.091546e-49 |
| MsG0380015589.01 | MsG0380016517.01 | 0.837123 | 6.257193e-57 | 8.049450e-54 |
| MsG0380015589.01 | MsG0380016694.01 | 0.813904 | 2.020715e-51 | 1.336401e-48 |
| MsG0380015589.01 | MsG0380017220.01 | 0.833342 | 5.634008e-56 | 6.470466e-53 |
| MsG0380015589.01 | MsG0380017233.01 | 0.825261 | 5.161969e-54 | 4.681532e-51 |
| MsG0380015589.01 | MsG0380017452.01 | 0.803756 | 2.994109e-49 | 1.516989e-46 |
| MsG0380015589.01 | MsG0380017461.01 | 0.846378 | 2.255121e-59 | 3.874168e-56 |
| MsG0380015589.01 | MsG0380017498.01 | 0.822372 | 2.453559e-53 | 2.049947e-50 |
| MsG0380015589.01 | MsG0380018075.01 | 0.818772 | 1.646607e-52 | 1.243983e-49 |
| MsG0380015589.01 | MsG0480018136.01 | 0.801168 | 1.022405e-48 | 4.849610e-46 |
| MsG0380015589.01 | MsG0480018183.01 | 0.843039 | 1.790435e-58 | 2.765957e-55 |
| MsG0380015589.01 | MsG0480018236.01 | 0.819470 | 1.141966e-52 | 8.796060e-50 |
| MsG0380015589.01 | MsG0480018251.01 | 0.839155 | 1.876714e-57 | 2.569034e-54 |
| MsG0380015589.01 | MsG0480018318.01 | 0.821838 | 3.262458e-53 | 2.684479e-50 |
| MsG0380015589.01 | MsG0480018465.01 | 0.831768 | 1.384194e-55 | 1.517095e-52 |
| MsG0380015589.01 | MsG0480018653.01 | 0.832650 | 8.376336e-56 | 9.421914e-53 |
| MsG0380015589.01 | MsG0480018778.01 | 0.805735 | 1.156401e-49 | 6.165281e-47 |
| MsG0380015589.01 | MsG0480018872.01 | 0.810557 | 1.086561e-50 | 6.570347e-48 |
| MsG0380015589.01 | MsG0480018883.01 | 0.822331 | 2.508665e-53 | 2.093395e-50 |
| MsG0380015589.01 | MsG0480019035.01 | 0.813830 | 2.098337e-51 | 1.384931e-48 |
| MsG0380015589.01 | MsG0480020499.01 | 0.800054 | 1.725587e-48 | 7.956781e-46 |
| MsG0380015589.01 | MsG0480020505.01 | 0.802048 | 6.747695e-49 | 3.272712e-46 |
| MsG0380015589.01 | MsG0480020836.01 | 0.815686 | 8.140686e-52 | 5.651099e-49 |
| MsG0380015589.01 | MsG0480021534.01 | 0.813137 | 2.980529e-51 | 1.930410e-48 |
| MsG0380015589.01 | MsG0480021724.01 | 0.800879 | 1.171675e-48 | 5.517284e-46 |
| MsG0380015589.01 | MsG0480021796.01 | 0.800398 | 1.468420e-48 | 6.830469e-46 |
| MsG0380015589.01 | MsG0480021918.01 | 0.832072 | 1.164789e-55 | 1.287905e-52 |
| MsG0380015589.01 | MsG0480021948.01 | 0.809075 | 2.263360e-50 | 1.316076e-47 |
| MsG0380015589.01 | MsG0480022068.01 | 0.813441 | 2.555112e-51 | 1.668829e-48 |
| MsG0380015589.01 | MsG0480022259.01 | 0.823878 | 1.092900e-53 | 9.528286e-51 |
| MsG0380015589.01 | MsG0480022262.01 | 0.829806 | 4.189272e-55 | 4.334624e-52 |
| MsG0380015589.01 | MsG0480022615.01 | -0.806665 | 7.368447e-50 | 4.022378e-47 |
| MsG0380015589.01 | MsG0480022827.01 | 0.810551 | 1.089746e-50 | 6.588401e-48 |
| MsG0380015589.01 | MsG0480023172.01 | 0.814485 | 1.504557e-51 | 1.010839e-48 |
| MsG0380015589.01 | MsG0480023248.01 | 0.811254 | 7.675294e-51 | 4.728007e-48 |
| MsG0380015589.01 | MsG0480023251.01 | 0.817195 | 3.740364e-52 | 2.705731e-49 |
| MsG0380015589.01 | MsG0480023354.01 | 0.803884 | 2.817393e-49 | 1.432168e-46 |
| MsG0380015589.01 | MsG0480023488.01 | 0.830063 | 3.626738e-55 | 3.779662e-52 |
| MsG0380015589.01 | MsG0480023654.01 | 0.804163 | 2.464134e-49 | 1.261580e-46 |
| MsG0380015589.01 | MsG0480023670.01 | 0.828554 | 8.428992e-55 | 8.406431e-52 |
| MsG0380015589.01 | MsG0580024038.01 | 0.813779 | 2.153220e-51 | 1.419177e-48 |
| MsG0380015589.01 | MsG0580024304.01 | 0.801766 | 7.713336e-49 | 3.714116e-46 |
| MsG0380015589.01 | MsG0580024363.01 | -0.822744 | 2.010781e-53 | 1.697841e-50 |
| MsG0380015589.01 | MsG0580024632.01 | 0.803367 | 3.606026e-49 | 1.808733e-46 |
| MsG0380015589.01 | MsG0580025723.01 | 0.816771 | 4.656218e-52 | 3.329566e-49 |
| MsG0380015589.01 | MsG0580025758.01 | 0.805123 | 1.553920e-49 | 8.154904e-47 |
| MsG0380015589.01 | MsG0580025900.01 | 0.804824 | 1.794070e-49 | 9.343577e-47 |
| MsG0380015589.01 | MsG0580026002.01 | 0.824805 | 6.615595e-54 | 5.922680e-51 |
| MsG0380015589.01 | MsG0580026340.01 | 0.809527 | 1.811004e-50 | 1.065807e-47 |
| MsG0380015589.01 | MsG0580027211.01 | 0.813667 | 2.278749e-51 | 1.497435e-48 |
| MsG0380015589.01 | MsG0580027745.01 | 0.804074 | 2.571644e-49 | 1.313674e-46 |
| MsG0380015589.01 | MsG0580027767.01 | 0.827749 | 1.317267e-54 | 1.283200e-51 |
| MsG0380015589.01 | MsG0580027922.01 | 0.830710 | 2.519737e-55 | 2.676069e-52 |
| MsG0380015589.01 | MsG0580029704.01 | 0.818828 | 1.599066e-52 | 1.209912e-49 |
| MsG0380015589.01 | MsG0680030364.01 | 0.827286 | 1.701429e-54 | 1.635376e-51 |
| MsG0380015589.01 | MsG0680030667.01 | 0.801567 | 8.472950e-49 | 4.059493e-46 |
| MsG0380015589.01 | MsG0680030880.01 | 0.833284 | 5.824515e-56 | 6.676850e-53 |
| MsG0380015589.01 | MsG0680031114.01 | 0.847467 | 1.135263e-59 | 2.019846e-56 |
| MsG0380015589.01 | MsG0680032157.01 | 0.803367 | 3.605707e-49 | 1.808583e-46 |
| MsG0380015589.01 | MsG0680033465.01 | 0.804627 | 1.972679e-49 | 1.022066e-46 |
| MsG0380015589.01 | MsG0680034481.01 | 0.810051 | 1.396715e-50 | 8.334366e-48 |
| MsG0380015589.01 | MsG0680034739.01 | 0.819290 | 1.254882e-52 | 9.616426e-50 |
| MsG0380015589.01 | MsG0680034891.01 | 0.807789 | 4.258116e-50 | 2.393464e-47 |
| MsG0380015589.01 | MsG0680035005.01 | 0.801576 | 8.436601e-49 | 4.043018e-46 |
| MsG0380015589.01 | MsG0680035040.01 | 0.811455 | 6.943268e-51 | 4.299866e-48 |
| MsG0380015589.01 | MsG0680035828.01 | 0.804816 | 1.801271e-49 | 9.379124e-47 |
| MsG0380015589.01 | MsG0780036018.01 | 0.858991 | 5.630833e-63 | 1.464393e-59 |
| MsG0380015589.01 | MsG0780036789.01 | 0.820008 | 8.603554e-53 | 6.727171e-50 |
| MsG0380015589.01 | MsG0780036950.01 | 0.816250 | 6.091375e-52 | 4.294301e-49 |
| MsG0380015589.01 | MsG0780037054.01 | 0.812761 | 3.602933e-51 | 2.310331e-48 |
| MsG0380015589.01 | MsG0780037146.01 | 0.810813 | 9.563208e-51 | 5.822566e-48 |
| MsG0380015589.01 | MsG0780037457.01 | 0.808706 | 2.714856e-50 | 1.563119e-47 |
| MsG0380015589.01 | MsG0780037592.01 | 0.812118 | 4.979591e-51 | 3.138813e-48 |
| MsG0380015589.01 | MsG0780037630.01 | 0.805370 | 1.379536e-49 | 7.285638e-47 |
| MsG0380015589.01 | MsG0780037845.01 | 0.805580 | 1.246463e-49 | 6.618513e-47 |
| MsG0380015589.01 | MsG0780037964.01 | 0.809311 | 2.014774e-50 | 1.178936e-47 |
| MsG0380015589.01 | MsG0780038051.01 | 0.814101 | 1.828346e-51 | 1.215621e-48 |
| MsG0380015589.01 | MsG0780038386.01 | 0.802317 | 5.941755e-49 | 2.901803e-46 |
| MsG0380015589.01 | MsG0780038439.01 | 0.852867 | 3.482710e-61 | 7.380959e-58 |
| MsG0380015589.01 | MsG0780038602.01 | 0.840825 | 6.886366e-58 | 9.928005e-55 |
| MsG0380015589.01 | MsG0780038644.01 | 0.815933 | 7.171599e-52 | 5.011838e-49 |
| MsG0380015589.01 | MsG0780038907.01 | 0.818101 | 2.336466e-52 | 1.732683e-49 |
| MsG0380015589.01 | MsG0780039170.01 | 0.811100 | 8.287338e-51 | 5.084458e-48 |
| MsG0380015589.01 | MsG0780039178.01 | 0.830266 | 3.235103e-55 | 3.391593e-52 |
| MsG0380015589.01 | MsG0780039252.01 | 0.803390 | 3.566815e-49 | 1.790143e-46 |
| MsG0380015589.01 | MsG0780039423.01 | 0.818246 | 2.166691e-52 | 1.613174e-49 |
| MsG0380015589.01 | MsG0780039443.01 | 0.837568 | 4.814056e-57 | 6.278543e-54 |
| MsG0380015589.01 | MsG0780039655.01 | 0.836298 | 1.015545e-56 | 1.274651e-53 |
| MsG0380015589.01 | MsG0780039832.01 | 0.800804 | 1.213475e-48 | 5.702882e-46 |
| MsG0380015589.01 | MsG0780040074.01 | 0.839995 | 1.135027e-57 | 1.594894e-54 |
| MsG0380015589.01 | MsG0780040261.01 | 0.804171 | 2.454875e-49 | 1.257090e-46 |
| MsG0380015589.01 | MsG0780040576.01 | -0.824803 | 6.621055e-54 | 5.927278e-51 |
| MsG0380015589.01 | MsG0780040591.01 | 0.804167 | 2.460087e-49 | 1.259604e-46 |
| MsG0380015589.01 | MsG0780040664.01 | 0.804952 | 1.687083e-49 | 8.815391e-47 |
| MsG0380015589.01 | MsG0780040788.01 | 0.807170 | 5.759536e-50 | 3.185714e-47 |
| MsG0380015589.01 | MsG0780041229.01 | 0.816036 | 6.800838e-52 | 4.766443e-49 |
| MsG0380015589.01 | MsG0780041387.01 | 0.813502 | 2.477806e-51 | 1.620988e-48 |
| MsG0380015589.01 | MsG0880042161.01 | 0.857139 | 2.001067e-62 | 4.889743e-59 |
| MsG0380015589.01 | MsG0880042520.01 | 0.829231 | 5.777494e-55 | 5.877757e-52 |
| MsG0380015589.01 | MsG0880042698.01 | 0.824703 | 6.992328e-54 | 6.241648e-51 |
| MsG0380015589.01 | MsG0880043214.01 | 0.823496 | 1.342805e-53 | 1.158131e-50 |
| MsG0380015589.01 | MsG0880043479.01 | 0.802811 | 4.699844e-49 | 2.324327e-46 |
| MsG0380015589.01 | MsG0880043480.01 | 0.831754 | 1.395172e-55 | 1.528447e-52 |
| MsG0380015589.01 | MsG0880043521.01 | 0.829137 | 6.090463e-55 | 6.178469e-52 |
| MsG0380015589.01 | MsG0880043937.01 | 0.827239 | 1.746279e-54 | 1.676167e-51 |
| MsG0380015589.01 | MsG0880043941.01 | 0.844401 | 7.736913e-59 | 1.247573e-55 |
| MsG0380015589.01 | MsG0880044554.01 | 0.804277 | 2.333711e-49 | 1.198290e-46 |
| MsG0380015589.01 | MsG0880044573.01 | 0.844195 | 8.785233e-59 | 1.407688e-55 |
| MsG0380015589.01 | MsG0880044574.01 | 0.859991 | 2.818188e-63 | 7.587291e-60 |
| MsG0380015589.01 | MsG0880044950.01 | 0.802104 | 6.572229e-49 | 3.192038e-46 |
| MsG0380015589.01 | MsG0880045111.01 | 0.805719 | 1.165593e-49 | 6.211592e-47 |
| MsG0380015589.01 | MsG0880045371.01 | 0.805559 | 1.259274e-49 | 6.682665e-47 |
| MsG0380015589.01 | MsG0880045372.01 | 0.814246 | 1.698340e-51 | 1.133683e-48 |
| MsG0380015589.01 | MsG0880045639.01 | 0.814180 | 1.756976e-51 | 1.170681e-48 |
| MsG0380015589.01 | MsG0880046531.01 | 0.810176 | 1.312925e-50 | 7.859601e-48 |
| MsG0280006601.01 | MsG0380015589.01 | 0.803615 | 3.203469e-49 | 1.617162e-46 |
| MsG0280006766.01 | MsG0380015589.01 | 0.808578 | 2.891243e-50 | 1.659169e-47 |
| MsG0280007066.01 | MsG0380015589.01 | 0.827996 | 1.148965e-54 | 1.127438e-51 |
| MsG0280007072.01 | MsG0380015589.01 | 0.839258 | 1.764481e-57 | 2.423177e-54 |
| MsG0280007496.01 | MsG0380015589.01 | 0.805731 | 1.158516e-49 | 6.176009e-47 |
| MsG0280007547.01 | MsG0380015589.01 | 0.805750 | 1.148199e-49 | 6.123892e-47 |
| MsG0280008030.01 | MsG0380015589.01 | 0.806746 | 7.080855e-50 | 3.873720e-47 |
| MsG0280008112.01 | MsG0380015589.01 | 0.810214 | 1.288529e-50 | 7.720928e-48 |
| MsG0280008113.01 | MsG0380015589.01 | 0.821078 | 4.888646e-53 | 3.937846e-50 |
| MsG0280008363.01 | MsG0380015589.01 | 0.803663 | 3.130492e-49 | 1.582222e-46 |
| MsG0280008377.01 | MsG0380015589.01 | 0.800882 | 1.169941e-48 | 5.509528e-46 |
| MsG0280008378.01 | MsG0380015589.01 | 0.800534 | 1.377510e-48 | 6.429631e-46 |
| MsG0280008615.01 | MsG0380015589.01 | 0.805883 | 1.076360e-49 | 5.760160e-47 |
| MsG0280008894.01 | MsG0380015589.01 | 0.832582 | 8.707356e-56 | 9.774378e-53 |
| MsG0280009668.01 | MsG0380015589.01 | 0.800896 | 1.162138e-48 | 5.474766e-46 |
| MsG0280009748.01 | MsG0380015589.01 | 0.819000 | 1.461470e-52 | 1.111192e-49 |
| MsG0280010350.01 | MsG0380015589.01 | 0.803474 | 3.426030e-49 | 1.723264e-46 |
| MsG0280010443.01 | MsG0380015589.01 | 0.806084 | 9.765140e-50 | 5.252755e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015589.01.T01 | MTR_3g073010 | 91.544 | 272 | 3 | 1 | 62 | 333 | 34 | 285 | 0.0 | 507 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015589.01.T01 | AT2G25710 | 59.259 | 297 | 97 | 4 | 41 | 335 | 20 | 294 | 6.45e-120 | 348 |
| MsG0380015589.01.T01 | AT2G25710 | 59.259 | 297 | 97 | 4 | 41 | 335 | 20 | 294 | 6.45e-120 | 348 |
| MsG0380015589.01.T01 | AT2G25710 | 59.661 | 295 | 95 | 4 | 41 | 333 | 20 | 292 | 3.43e-119 | 346 |
| MsG0380015589.01.T01 | AT2G25710 | 59.661 | 295 | 95 | 4 | 41 | 333 | 20 | 292 | 3.43e-119 | 346 |
| MsG0380015589.01.T01 | AT2G25710 | 59.661 | 295 | 95 | 4 | 41 | 333 | 20 | 292 | 1.50e-118 | 347 |
| MsG0380015589.01.T01 | AT2G25710 | 59.661 | 295 | 95 | 4 | 41 | 333 | 20 | 292 | 1.50e-118 | 347 |
| MsG0380015589.01.T01 | AT2G25710 | 62.637 | 273 | 80 | 3 | 62 | 333 | 3 | 254 | 5.39e-118 | 344 |
| MsG0380015589.01.T01 | AT2G25710 | 62.637 | 273 | 80 | 3 | 62 | 333 | 3 | 254 | 5.39e-118 | 344 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 3.73e-114 | 333 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 3.73e-114 | 333 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 3.73e-114 | 333 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 5.81e-114 | 332 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 5.81e-114 | 332 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 2.33e-113 | 332 |
| MsG0380015589.01.T01 | AT1G37150 | 61.710 | 269 | 81 | 3 | 66 | 333 | 7 | 254 | 4.33e-113 | 332 |
| MsG0380015589.01.T01 | AT1G37150 | 57.642 | 229 | 66 | 2 | 116 | 333 | 3 | 211 | 3.21e-89 | 269 |
| MsG0380015589.01.T01 | AT1G37150 | 62.842 | 183 | 48 | 1 | 151 | 333 | 9 | 171 | 2.02e-80 | 244 |
Find 63 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTAGAACTGTATTTA+AGG | 0.111945 | 3:-72242076 | None:intergenic |
| GAACATCTTCTCTTTGAAAT+TGG | 0.211376 | 3:-72242116 | None:intergenic |
| TCTCTTTCTACCAATCAATT+TGG | 0.239071 | 3:+72239796 | MsG0380015589.01.T01:CDS |
| AATTCATGAATGAACTAAAT+TGG | 0.279539 | 3:-72239774 | None:intergenic |
| AGGGAGCTTGAGAGTGTTAT+TGG | 0.294498 | 3:-72239683 | None:intergenic |
| TCAAACCTCTTCCCTTGTTC+TGG | 0.304902 | 3:-72240114 | None:intergenic |
| CCGTTTAAGTACAGATCATT+TGG | 0.323737 | 3:-72240949 | None:intergenic |
| CAATATCAGTGCAGGTAATA+AGG | 0.326773 | 3:+72241023 | MsG0380015589.01.T01:CDS |
| AGTTCAGTATGTTGTTTCCT+TGG | 0.354644 | 3:+72240313 | MsG0380015589.01.T01:CDS |
| GAACTCTGAATGTAAAATAA+TGG | 0.359620 | 3:-72239722 | None:intergenic |
| ATGGATAGTTCTTTCTTGTC+AGG | 0.365223 | 3:-72239703 | None:intergenic |
| TTCCATGATTTCACAGGAAT+AGG | 0.373609 | 3:+72242021 | MsG0380015589.01.T01:CDS |
| ACTGTATTTAAGGATGTTGT+TGG | 0.393939 | 3:-72242066 | None:intergenic |
| ATTTCAAAGAGAAGATGTTC+TGG | 0.407060 | 3:+72242119 | MsG0380015589.01.T01:CDS |
| AGCTGTGGATTGCAGTTTGT+TGG | 0.408229 | 3:+72239609 | MsG0380015589.01.T01:CDS |
| CCAAATGATCTGTACTTAAA+CGG | 0.410986 | 3:+72240949 | MsG0380015589.01.T01:CDS |
| AATTTGGCAGGCTTCTCATA+TGG | 0.421581 | 3:+72239812 | MsG0380015589.01.T01:CDS |
| TACTTAAACGGATTTAAAGT+TGG | 0.432774 | 3:+72240961 | MsG0380015589.01.T01:CDS |
| ATCCTATTCCTGTGAAATCA+TGG | 0.434576 | 3:-72242023 | None:intergenic |
| GAAAACATCAGGCAACCTAA+TGG | 0.441676 | 3:-72240251 | None:intergenic |
| CAGGTCGGTCAAAGAATGCC+TGG | 0.453946 | 3:+72240222 | MsG0380015589.01.T01:intron |
| GGCTATCACAGAGGCAATCA+AGG | 0.464240 | 3:+72240334 | MsG0380015589.01.T01:CDS |
| GCAGAGTAAAAGAAAACATC+AGG | 0.469791 | 3:-72240262 | None:intergenic |
| AATGCCTGGGAGTCTCCATT+AGG | 0.471596 | 3:+72240236 | MsG0380015589.01.T01:CDS |
| GAGAAGCCTGCCAAATTGAT+TGG | 0.473011 | 3:-72239806 | None:intergenic |
| TTTCTACCAATCAATTTGGC+AGG | 0.476100 | 3:+72239800 | MsG0380015589.01.T01:CDS |
| AACAAATTCCATGATTTCAC+AGG | 0.484516 | 3:+72242015 | MsG0380015589.01.T01:CDS |
| GAAACAACATACTGAACTAA+AGG | 0.493234 | 3:-72240308 | None:intergenic |
| CATGAATGAACTAAATTGGA+AGG | 0.495238 | 3:-72239770 | None:intergenic |
| CTTCTTTGATTTATATGTAG+AGG | 0.504393 | 3:-72240998 | None:intergenic |
| AATACACACTGGAAGGTTGA+TGG | 0.504856 | 3:+72239285 | MsG0380015589.01.T01:CDS |
| TTTACTCTGCAAATGGAGGA+TGG | 0.511964 | 3:+72240275 | MsG0380015589.01.T01:CDS |
| CTCTGCAAATGGAGGATGGA+CGG | 0.514061 | 3:+72240279 | MsG0380015589.01.T01:CDS |
| TGGATAGTTCTTTCTTGTCA+GGG | 0.530693 | 3:-72239702 | None:intergenic |
| CCAACACATACTGTACCAAC+CGG | 0.533546 | 3:-72240085 | None:intergenic |
| TTAAACGGATTTAAAGTTGG+AGG | 0.536654 | 3:+72240964 | MsG0380015589.01.T01:CDS |
| AAGAAGTTCAATATCAGTGC+AGG | 0.537210 | 3:+72241015 | MsG0380015589.01.T01:CDS |
| TGCAGTTTGTTGGTTCTATG+TGG | 0.543232 | 3:+72239619 | MsG0380015589.01.T01:CDS |
| TCTGCAAATGGAGGATGGAC+GGG | 0.547695 | 3:+72240280 | MsG0380015589.01.T01:CDS |
| TATACACTCATGGCATCCTC+AGG | 0.556833 | 3:+72239385 | MsG0380015589.01.T01:CDS |
| TGAGTGTATATGTATAAAGA+TGG | 0.560836 | 3:-72239372 | None:intergenic |
| GCAACCTAATGGAGACTCCC+AGG | 0.571631 | 3:-72240240 | None:intergenic |
| TTTGCAGCTAAACTTGTTTG+GGG | 0.583987 | 3:+72241764 | MsG0380015589.01.T01:intron |
| TCTTTATACATATACACTCA+TGG | 0.584917 | 3:+72239375 | MsG0380015589.01.T01:CDS |
| GTTGTAAACCCTCCTTGTGG+TGG | 0.586071 | 3:-72239347 | None:intergenic |
| GTTCTAAGAGAATTGTCTGT+GGG | 0.590225 | 3:+72242087 | MsG0380015589.01.T01:CDS |
| CGTTGTTATTAGCCACCACA+AGG | 0.591906 | 3:+72239335 | MsG0380015589.01.T01:CDS |
| GATATCCAGAACAAGGGAAG+AGG | 0.594894 | 3:+72240109 | MsG0380015589.01.T01:CDS |
| TGTTGGTGATATCCAGAACA+AGG | 0.598168 | 3:+72240102 | MsG0380015589.01.T01:CDS |
| GCATTGATGTTAAAATCAAG+TGG | 0.601093 | 3:+72240926 | MsG0380015589.01.T01:CDS |
| GTTATTAGCCACCACAAGGA+GGG | 0.602791 | 3:+72239339 | MsG0380015589.01.T01:CDS |
| AGGTCGGTCAAAGAATGCCT+GGG | 0.612004 | 3:+72240223 | MsG0380015589.01.T01:intron |
| CCGGTTGGTACAGTATGTGT+TGG | 0.612660 | 3:+72240085 | MsG0380015589.01.T01:CDS |
| TCATGTGTCGAAGTTAACTC+AGG | 0.633045 | 3:-72239838 | None:intergenic |
| GATTGCCTCTGTGATAGCCA+AGG | 0.635755 | 3:-72240330 | None:intergenic |
| GTTAGACAATACACACTGGA+AGG | 0.645097 | 3:+72239278 | None:intergenic |
| TGTTATTAGCCACCACAAGG+AGG | 0.667643 | 3:+72239338 | MsG0380015589.01.T01:CDS |
| AGTTCTAAGAGAATTGTCTG+TGG | 0.675294 | 3:+72242086 | MsG0380015589.01.T01:CDS |
| TGTTTCCTTGGCTATCACAG+AGG | 0.702795 | 3:+72240325 | MsG0380015589.01.T01:CDS |
| GTTGGTGATATCCAGAACAA+GGG | 0.711490 | 3:+72240103 | MsG0380015589.01.T01:CDS |
| ACAGGTTGCGATCTAACCTG+AGG | 0.713454 | 3:-72239401 | None:intergenic |
| ATAGGTTAGACAATACACAC+TGG | 0.737877 | 3:+72239274 | None:intergenic |
| GTAGTTGTAAACCCTCCTTG+TGG | 0.780824 | 3:-72239350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATCTTCTTTATAAT+TGG | - | Chr3:72241121-72241140 | None:intergenic | 10.0% |
| !! | AACTTAAAATATAACTTAAA+AGG | - | Chr3:72240170-72240189 | None:intergenic | 10.0% |
| !! | ACCAAAAAAATTATAATTTA+TGG | - | Chr3:72241187-72241206 | None:intergenic | 10.0% |
| !! | ACTTAAAATATAACTTAAAA+GGG | - | Chr3:72240169-72240188 | None:intergenic | 10.0% |
| !! | AGGTAAATAAAAAAAAAATT+TGG | - | Chr3:72239995-72240014 | None:intergenic | 10.0% |
| !! | TTATTAATCTAATATTAAAC+AGG | - | Chr3:72241395-72241414 | None:intergenic | 10.0% |
| !!! | AATTTATTTTAATGTCATTT+TGG | + | Chr3:72241983-72242002 | MsG0380015589.01.T01:intron | 10.0% |
| !!! | TAAAGAATAATATTTTTTTG+GGG | + | Chr3:72241840-72241859 | MsG0380015589.01.T01:intron | 10.0% |
| !!! | TCCATAAATTATAATTTTTT+TGG | + | Chr3:72241183-72241202 | MsG0380015589.01.T01:intron | 10.0% |
| !! | AATATTATTCTTTAATTGGT+CGG | - | Chr3:72241834-72241853 | None:intergenic | 15.0% |
| !! | AGTATTAAATTTAACACTTA+AGG | + | Chr3:72240440-72240459 | MsG0380015589.01.T01:intron | 15.0% |
| !! | ATTGATAGATTTATTTGTAT+TGG | - | Chr3:72241706-72241725 | None:intergenic | 15.0% |
| !! | GACTAAAATTAATAAATCTT+AGG | + | Chr3:72241300-72241319 | MsG0380015589.01.T01:intron | 15.0% |
| !! | TAATCTCTAACAAAAAATTA+AGG | + | Chr3:72241278-72241297 | MsG0380015589.01.T01:intron | 15.0% |
| !! | TCTATAATGAATTAAATTCA+TGG | + | Chr3:72239522-72239541 | MsG0380015589.01.T01:intron | 15.0% |
| !! | AAAAAAGATCTTAAACATAC+TGG | - | Chr3:72240028-72240047 | None:intergenic | 20.0% |
| !! | AAAAAGATCTTAAACATACT+GGG | - | Chr3:72240027-72240046 | None:intergenic | 20.0% |
| !! | AATTCATGAATGAACTAAAT+TGG | - | Chr3:72239777-72239796 | None:intergenic | 20.0% |
| !! | ATAGTCATAGACAAATTAAA+TGG | - | Chr3:72241615-72241634 | None:intergenic | 20.0% |
| !! | TAATATTCTGGTAAAAGTAA+TGG | + | Chr3:72240507-72240526 | MsG0380015589.01.T01:intron | 20.0% |
| !! | TAGCTAATAGTATAATACAT+GGG | - | Chr3:72241926-72241945 | None:intergenic | 20.0% |
| !! | TAGCTCAATGTTTATAATTT+GGG | + | Chr3:72241787-72241806 | MsG0380015589.01.T01:intron | 20.0% |
| !! | TTAGCTAATAGTATAATACA+TGG | - | Chr3:72241927-72241946 | None:intergenic | 20.0% |
| !!! | CTTCTCAAATTTGTTAAAAA+AGG | - | Chr3:72242148-72242167 | None:intergenic | 20.0% |
| !!! | GTTTTGCTTATAAATATGAA+CGG | - | Chr3:72241448-72241467 | None:intergenic | 20.0% |
| !!! | TTTGATCTATTTTTGAATCA+AGG | + | Chr3:72242171-72242190 | MsG0380015589.01.T01:CDS | 20.0% |
| ! | AAATTGTTACAAAAATGCAC+AGG | - | Chr3:72240887-72240906 | None:intergenic | 25.0% |
| ! | AGCTCAATGTTTATAATTTG+GGG | + | Chr3:72241788-72241807 | MsG0380015589.01.T01:intron | 25.0% |
| ! | ATTCATGGTTATTGAACAAT+TGG | + | Chr3:72239537-72239556 | MsG0380015589.01.T01:intron | 25.0% |
| ! | CATTGAATACTCTATGTATT+TGG | - | Chr3:72241522-72241541 | None:intergenic | 25.0% |
| ! | GAACTCTGAATGTAAAATAA+TGG | - | Chr3:72239725-72239744 | None:intergenic | 25.0% |
| ! | GTAGCTCAATGTTTATAATT+TGG | + | Chr3:72241786-72241805 | MsG0380015589.01.T01:intron | 25.0% |
| ! | TAATAGTATAATACATGGGA+TGG | - | Chr3:72241922-72241941 | None:intergenic | 25.0% |
| ! | TCTTTATACATATACACTCA+TGG | + | Chr3:72239375-72239394 | MsG0380015589.01.T01:CDS | 25.0% |
| ! | TGAGTGTATATGTATAAAGA+TGG | - | Chr3:72239375-72239394 | None:intergenic | 25.0% |
| ! | TGTGTACAAGTTTAATATTC+TGG | + | Chr3:72240495-72240514 | MsG0380015589.01.T01:intron | 25.0% |
| ! | TTCTCTTAGAACTGTATTTA+AGG | - | Chr3:72242079-72242098 | None:intergenic | 25.0% |
| !! | AATTTTTCACGATCTGATTA+TGG | - | Chr3:72239931-72239950 | None:intergenic | 25.0% |
| !! | ATTTTTCACGATCTGATTAT+GGG | - | Chr3:72239930-72239949 | None:intergenic | 25.0% |
| !! | CTTCTTTGATTTATATGTAG+AGG | - | Chr3:72241001-72241020 | None:intergenic | 25.0% |
| !! | TACTTAAACGGATTTAAAGT+TGG | + | Chr3:72240961-72240980 | MsG0380015589.01.T01:CDS | 25.0% |
| !!! | ATTTTAATGTCATTTTGGTG+AGG | + | Chr3:72241988-72242007 | MsG0380015589.01.T01:intron | 25.0% |
| !!! | TTGATTTTAACATCAATGCA+CGG | - | Chr3:72240925-72240944 | None:intergenic | 25.0% |
| AAAACACGAAGAACAGAAAA+AGG | - | Chr3:72239888-72239907 | None:intergenic | 30.0% | |
| AACAAATTCCATGATTTCAC+AGG | + | Chr3:72242015-72242034 | MsG0380015589.01.T01:CDS | 30.0% | |
| ACTGTATTTAAGGATGTTGT+TGG | - | Chr3:72242069-72242088 | None:intergenic | 30.0% | |
| ATAAATGCTTGCTTTGTGTT+TGG | + | Chr3:72240799-72240818 | MsG0380015589.01.T01:intron | 30.0% | |
| ATCTTAAGCACAAGAAAGTT+TGG | - | Chr3:72239963-72239982 | None:intergenic | 30.0% | |
| ATTTCAAAGAGAAGATGTTC+TGG | + | Chr3:72242119-72242138 | MsG0380015589.01.T01:CDS | 30.0% | |
| ATTTGTCGTTCATGCTTAAT+AGG | - | Chr3:72240686-72240705 | None:intergenic | 30.0% | |
| CATAAAATTGCTAGAAACGT+TGG | + | Chr3:72241330-72241349 | MsG0380015589.01.T01:intron | 30.0% | |
| CATGAATGAACTAAATTGGA+AGG | - | Chr3:72239773-72239792 | None:intergenic | 30.0% | |
| CCAAATGATCTGTACTTAAA+CGG | + | Chr3:72240949-72240968 | MsG0380015589.01.T01:CDS | 30.0% | |
| GAAACAACATACTGAACTAA+AGG | - | Chr3:72240311-72240330 | None:intergenic | 30.0% | |
| GTGAACAGGATTTAATATAC+TGG | - | Chr3:72241951-72241970 | None:intergenic | 30.0% | |
| TAAGATACTGTGACAAATCA+TGG | - | Chr3:72240845-72240864 | None:intergenic | 30.0% | |
| TATTAAGCATGAACGACAAA+TGG | + | Chr3:72240685-72240704 | MsG0380015589.01.T01:intron | 30.0% | |
| TCTCTTTCTACCAATCAATT+TGG | + | Chr3:72239796-72239815 | MsG0380015589.01.T01:CDS | 30.0% | |
| TGCTTATAAATATGAACGGA+GGG | - | Chr3:72241444-72241463 | None:intergenic | 30.0% | |
| TTACTTATAAATGTGACCAG+AGG | + | Chr3:72241560-72241579 | MsG0380015589.01.T01:intron | 30.0% | |
| TTATCTACTAAACGCAAACT+TGG | + | Chr3:72240609-72240628 | MsG0380015589.01.T01:intron | 30.0% | |
| TTGCTTATAAATATGAACGG+AGG | - | Chr3:72241445-72241464 | None:intergenic | 30.0% | |
| ! | GCATTGATGTTAAAATCAAG+TGG | + | Chr3:72240926-72240945 | MsG0380015589.01.T01:CDS | 30.0% |
| ! | GTTTTCTTTTACTCTGCAAA+TGG | + | Chr3:72240268-72240287 | MsG0380015589.01.T01:CDS | 30.0% |
| ! | TCTATTGTTGTTATTGAGAC+CGG | + | Chr3:72241670-72241689 | MsG0380015589.01.T01:intron | 30.0% |
| ! | TTAAACGGATTTAAAGTTGG+AGG | + | Chr3:72240964-72240983 | MsG0380015589.01.T01:CDS | 30.0% |
| ! | TTCAAAAGCTGAATGGTTTT+TGG | + | Chr3:72240760-72240779 | MsG0380015589.01.T01:intron | 30.0% |
| ! | TTGTAACAATTTTCATCCCA+GGG | + | Chr3:72240895-72240914 | MsG0380015589.01.T01:intron | 30.0% |
| ! | TTTGTAACAATTTTCATCCC+AGG | + | Chr3:72240894-72240913 | MsG0380015589.01.T01:intron | 30.0% |
| !! | GAACATCTTCTCTTTGAAAT+TGG | - | Chr3:72242119-72242138 | None:intergenic | 30.0% |
| !! | GTTTTAGATTATGCATTGGT+TGG | + | Chr3:72239903-72239922 | MsG0380015589.01.T01:intron | 30.0% |
| !! | TCGTGTTTTAGATTATGCAT+TGG | + | Chr3:72239899-72239918 | MsG0380015589.01.T01:intron | 30.0% |
| !! | TTGTATTGGTTTGATACTTC+CGG | - | Chr3:72241692-72241711 | None:intergenic | 30.0% |
| !! | TTTTGCAGCTAAACTTGTTT+GGG | + | Chr3:72241763-72241782 | MsG0380015589.01.T01:intron | 30.0% |
| !! | TTTTTGCAGCTAAACTTGTT+TGG | + | Chr3:72241762-72241781 | MsG0380015589.01.T01:intron | 30.0% |
| !!! | AGCACTTGGTTTTAAATTAC+TGG | + | Chr3:72240377-72240396 | MsG0380015589.01.T01:intron | 30.0% |
| !!! | ATGGTGCTTTTTTGTGAATA+TGG | + | Chr3:72240526-72240545 | MsG0380015589.01.T01:intron | 30.0% |
| AAGAAGTTCAATATCAGTGC+AGG | + | Chr3:72241015-72241034 | MsG0380015589.01.T01:CDS | 35.0% | |
| ACTTAAAAGGGACAGAATCA+TGG | - | Chr3:72240157-72240176 | None:intergenic | 35.0% | |
| AGACAACTCTCATCATCATA+TGG | + | Chr3:72240734-72240753 | MsG0380015589.01.T01:intron | 35.0% | |
| AGATTGTTAGCTGAACAACT+GGG | + | Chr3:72239457-72239476 | MsG0380015589.01.T01:intron | 35.0% | |
| AGCTCGAAGAAAATTTATGC+AGG | + | Chr3:72241093-72241112 | MsG0380015589.01.T01:intron | 35.0% | |
| ATCCTATTCCTGTGAAATCA+TGG | - | Chr3:72242026-72242045 | None:intergenic | 35.0% | |
| ATGGAGTTTCAAAAGCTGAA+TGG | + | Chr3:72240753-72240772 | MsG0380015589.01.T01:intron | 35.0% | |
| ATGGATAGTTCTTTCTTGTC+AGG | - | Chr3:72239706-72239725 | None:intergenic | 35.0% | |
| ATTCAATGATGACCAATCAG+CGG | + | Chr3:72241067-72241086 | MsG0380015589.01.T01:intron | 35.0% | |
| CAATATCAGTGCAGGTAATA+AGG | + | Chr3:72241023-72241042 | MsG0380015589.01.T01:CDS | 35.0% | |
| CCGTTTAAGTACAGATCATT+TGG | - | Chr3:72240952-72240971 | None:intergenic | 35.0% | |
| CTCGAAGAAAATTTATGCAG+GGG | + | Chr3:72241095-72241114 | MsG0380015589.01.T01:intron | 35.0% | |
| GCAGAGTAAAAGAAAACATC+AGG | - | Chr3:72240265-72240284 | None:intergenic | 35.0% | |
| GCTCGAAGAAAATTTATGCA+GGG | + | Chr3:72241094-72241113 | MsG0380015589.01.T01:intron | 35.0% | |
| GGTCGGTATGTATTTATATC+CGG | - | Chr3:72241817-72241836 | None:intergenic | 35.0% | |
| GTGACAAAAATGTAAGCACT+TGG | + | Chr3:72240363-72240382 | MsG0380015589.01.T01:intron | 35.0% | |
| GTTGTTCAGCTAACAATCTA+TGG | - | Chr3:72239456-72239475 | None:intergenic | 35.0% | |
| TAGATTGTTAGCTGAACAAC+TGG | + | Chr3:72239456-72239475 | MsG0380015589.01.T01:intron | 35.0% | |
| TCCACAGCTGATAAAAATAG+AGG | - | Chr3:72239598-72239617 | None:intergenic | 35.0% | |
| TGCAAATAACTTACTTCCTC+TGG | - | Chr3:72241579-72241598 | None:intergenic | 35.0% | |
| TGGATAGTTCTTTCTTGTCA+GGG | - | Chr3:72239705-72239724 | None:intergenic | 35.0% | |
| TTAAATTCTCTGCAGTGAAC+AGG | - | Chr3:72241965-72241984 | None:intergenic | 35.0% | |
| TTCCATGATTTCACAGGAAT+AGG | + | Chr3:72242021-72242040 | MsG0380015589.01.T01:CDS | 35.0% | |
| TTTCCCTAACCAAATTCACT+GGG | - | Chr3:72240418-72240437 | None:intergenic | 35.0% | |
| TTTCTACCAATCAATTTGGC+AGG | + | Chr3:72239800-72239819 | MsG0380015589.01.T01:CDS | 35.0% | |
| ! | ATGGCAGCAACATTTTTGAA+AGG | + | Chr3:72240704-72240723 | MsG0380015589.01.T01:intron | 35.0% |
| ! | TGCATACAACTTCACAGTTT+TGG | - | Chr3:72240552-72240571 | None:intergenic | 35.0% |
| ! | TGTTTATAATTTGGGGTAGC+CGG | + | Chr3:72241795-72241814 | MsG0380015589.01.T01:intron | 35.0% |
| ! | TTCTTTTACTCTGCAAATGG+AGG | + | Chr3:72240271-72240290 | MsG0380015589.01.T01:CDS | 35.0% |
| ! | TTTGCAGCTAAACTTGTTTG+GGG | + | Chr3:72241764-72241783 | MsG0380015589.01.T01:intron | 35.0% |
| !! | AGTTCAGTATGTTGTTTCCT+TGG | + | Chr3:72240313-72240332 | MsG0380015589.01.T01:CDS | 35.0% |
| !! | AGTTCTAAGAGAATTGTCTG+TGG | + | Chr3:72242086-72242105 | MsG0380015589.01.T01:CDS | 35.0% |
| !! | GTTCTAAGAGAATTGTCTGT+GGG | + | Chr3:72242087-72242106 | MsG0380015589.01.T01:CDS | 35.0% |
| !! | TGGCAGCAACATTTTTGAAA+GGG | + | Chr3:72240705-72240724 | MsG0380015589.01.T01:intron | 35.0% |
| !!! | ATATTTTTTTGGGGTAGCCA+AGG | + | Chr3:72241849-72241868 | MsG0380015589.01.T01:intron | 35.0% |
| !!! | TCCTCTATTTTTATCAGCTG+TGG | + | Chr3:72239594-72239613 | MsG0380015589.01.T01:CDS | 35.0% |
| AACAAGGGAAGAGGTTTGAT+CGG | + | Chr3:72240118-72240137 | MsG0380015589.01.T01:intron | 40.0% | |
| AACATACTGGGAATGACAAC+AGG | - | Chr3:72240015-72240034 | None:intergenic | 40.0% | |
| AATACACACTGGAAGGTTGA+TGG | + | Chr3:72239285-72239304 | MsG0380015589.01.T01:CDS | 40.0% | |
| AATTTGGCAGGCTTCTCATA+TGG | + | Chr3:72239812-72239831 | MsG0380015589.01.T01:CDS | 40.0% | |
| ACATGGGATGGAAATGCAAT+TGG | - | Chr3:72241910-72241929 | None:intergenic | 40.0% | |
| ACTTAAGGCTGTATGCTTTC+AGG | + | Chr3:72240455-72240474 | MsG0380015589.01.T01:intron | 40.0% | |
| ATGGAAATGCAATTGGTCAC+AGG | - | Chr3:72241903-72241922 | None:intergenic | 40.0% | |
| CTACTAAACGCAAACTTGGT+TGG | + | Chr3:72240613-72240632 | MsG0380015589.01.T01:intron | 40.0% | |
| CTGTGACAAATCATGGAAGT+TGG | - | Chr3:72240838-72240857 | None:intergenic | 40.0% | |
| CTTTCCCTAACCAAATTCAC+TGG | - | Chr3:72240419-72240438 | None:intergenic | 40.0% | |
| GAAAACATCAGGCAACCTAA+TGG | - | Chr3:72240254-72240273 | None:intergenic | 40.0% | |
| TCATGTGTCGAAGTTAACTC+AGG | - | Chr3:72239841-72239860 | None:intergenic | 40.0% | |
| TCTCCCAGTGAATTTGGTTA+GGG | + | Chr3:72240412-72240431 | MsG0380015589.01.T01:intron | 40.0% | |
| TGGAAATGCAATTGGTCACA+GGG | - | Chr3:72241902-72241921 | None:intergenic | 40.0% | |
| TTTACTCTGCAAATGGAGGA+TGG | + | Chr3:72240275-72240294 | MsG0380015589.01.T01:CDS | 40.0% | |
| ! | AAGATAGCGCTGAAAGTAAC+AGG | - | Chr3:72239422-72239441 | None:intergenic | 40.0% |
| ! | TGCAGGTAATAAGGTGTTCT+TGG | + | Chr3:72241032-72241051 | MsG0380015589.01.T01:intron | 40.0% |
| !! | GTTGGTGATATCCAGAACAA+GGG | + | Chr3:72240103-72240122 | MsG0380015589.01.T01:CDS | 40.0% |
| !! | TGCAGTTTGTTGGTTCTATG+TGG | + | Chr3:72239619-72239638 | MsG0380015589.01.T01:CDS | 40.0% |
| !! | TGTTGGTGATATCCAGAACA+AGG | + | Chr3:72240102-72240121 | MsG0380015589.01.T01:CDS | 40.0% |
| ACCAAATTCACTGGGAGACT+AGG | - | Chr3:72240410-72240429 | None:intergenic | 45.0% | |
| CCAACACATACTGTACCAAC+CGG | - | Chr3:72240088-72240107 | None:intergenic | 45.0% | |
| GAGAAGCCTGCCAAATTGAT+TGG | - | Chr3:72239809-72239828 | None:intergenic | 45.0% | |
| GATATCCAGAACAAGGGAAG+AGG | + | Chr3:72240109-72240128 | MsG0380015589.01.T01:CDS | 45.0% | |
| GGAAATGCAATTGGTCACAG+GGG | - | Chr3:72241901-72241920 | None:intergenic | 45.0% | |
| GTAGTTGTAAACCCTCCTTG+TGG | - | Chr3:72239353-72239372 | None:intergenic | 45.0% | |
| GTCTCCCAGTGAATTTGGTT+AGG | + | Chr3:72240411-72240430 | MsG0380015589.01.T01:intron | 45.0% | |
| GTTATTAGCCACCACAAGGA+GGG | + | Chr3:72239339-72239358 | MsG0380015589.01.T01:CDS | 45.0% | |
| TATACACTCATGGCATCCTC+AGG | + | Chr3:72239385-72239404 | MsG0380015589.01.T01:CDS | 45.0% | |
| TCAAACCTCTTCCCTTGTTC+TGG | - | Chr3:72240117-72240136 | None:intergenic | 45.0% | |
| TCCTAGTCTCCCAGTGAATT+TGG | + | Chr3:72240406-72240425 | MsG0380015589.01.T01:intron | 45.0% | |
| TGTTATTAGCCACCACAAGG+AGG | + | Chr3:72239338-72239357 | MsG0380015589.01.T01:CDS | 45.0% | |
| TGTTTCCTTGGCTATCACAG+AGG | + | Chr3:72240325-72240344 | MsG0380015589.01.T01:CDS | 45.0% | |
| ! | AACTTTTGTGAGCTTCCGGT+TGG | + | Chr3:72240070-72240089 | MsG0380015589.01.T01:CDS | 45.0% |
| ! | AGCTGTGGATTGCAGTTTGT+TGG | + | Chr3:72239609-72239628 | MsG0380015589.01.T01:CDS | 45.0% |
| ! | CAGCAACTTTTGTGAGCTTC+CGG | + | Chr3:72240066-72240085 | MsG0380015589.01.T01:intron | 45.0% |
| ! | CGTTGTTATTAGCCACCACA+AGG | + | Chr3:72239335-72239354 | MsG0380015589.01.T01:CDS | 45.0% |
| !! | AGGGAGCTTGAGAGTGTTAT+TGG | - | Chr3:72239686-72239705 | None:intergenic | 45.0% |
| !! | AAAAAATATTATTCTTTAAT+TGG | - | Chr3:72241838-72241857 | None:intergenic | 5.0% |
| !! | AAACAAATATATTAAATTTA+AGG | + | Chr3:72241142-72241161 | MsG0380015589.01.T01:intron | 5.0% |
| !!! | ATTAAAGAATAATATTTTTT+TGG | + | Chr3:72241838-72241857 | MsG0380015589.01.T01:intron | 5.0% |
| !!! | TTAAAGAATAATATTTTTTT+GGG | + | Chr3:72241839-72241858 | MsG0380015589.01.T01:intron | 5.0% |
| AATGCCTGGGAGTCTCCATT+AGG | + | Chr3:72240236-72240255 | MsG0380015589.01.T01:CDS | 50.0% | |
| ACAGGTTGCGATCTAACCTG+AGG | - | Chr3:72239404-72239423 | None:intergenic | 50.0% | |
| AGGCATTCTTTGACCGACCT+GGG | - | Chr3:72240223-72240242 | None:intergenic | 50.0% | |
| AGGTCGGTCAAAGAATGCCT+GGG | + | Chr3:72240223-72240242 | MsG0380015589.01.T01:intron | 50.0% | |
| ATCAATGCACGGCAATCCCT+GGG | - | Chr3:72240914-72240933 | None:intergenic | 50.0% | |
| CTCTGCAAATGGAGGATGGA+CGG | + | Chr3:72240279-72240298 | MsG0380015589.01.T01:CDS | 50.0% | |
| GAGAGCTTAAACTCCCAGGT+CGG | + | Chr3:72240207-72240226 | MsG0380015589.01.T01:intron | 50.0% | |
| GATTGCCTCTGTGATAGCCA+AGG | - | Chr3:72240333-72240352 | None:intergenic | 50.0% | |
| GGCTATCACAGAGGCAATCA+AGG | + | Chr3:72240334-72240353 | MsG0380015589.01.T01:CDS | 50.0% | |
| GTTGTAAACCCTCCTTGTGG+TGG | - | Chr3:72239350-72239369 | None:intergenic | 50.0% | |
| TCTGCAAATGGAGGATGGAC+GGG | + | Chr3:72240280-72240299 | MsG0380015589.01.T01:CDS | 50.0% | |
| ! | CCGGTTGGTACAGTATGTGT+TGG | + | Chr3:72240085-72240104 | MsG0380015589.01.T01:CDS | 50.0% |
| ! | CTCTGAGAGCTTAAACTCCC+AGG | + | Chr3:72240203-72240222 | MsG0380015589.01.T01:intron | 50.0% |
| AGGCTACCCCTCCCATATGA+AGG | + | Chr3:72241869-72241888 | MsG0380015589.01.T01:intron | 55.0% | |
| CAGGCATTCTTTGACCGACC+TGG | - | Chr3:72240224-72240243 | None:intergenic | 55.0% | |
| CAGGTCGGTCAAAGAATGCC+TGG | + | Chr3:72240222-72240241 | MsG0380015589.01.T01:intron | 55.0% | |
| CATCAATGCACGGCAATCCC+TGG | - | Chr3:72240915-72240934 | None:intergenic | 55.0% | |
| CGTAGCCCTTCATATGGGAG+GGG | - | Chr3:72241878-72241897 | None:intergenic | 55.0% | |
| GCAACCTAATGGAGACTCCC+AGG | - | Chr3:72240243-72240262 | None:intergenic | 55.0% | |
| GCGTAGCCCTTCATATGGGA+GGG | - | Chr3:72241879-72241898 | None:intergenic | 55.0% | |
| GGCTACCCCTCCCATATGAA+GGG | + | Chr3:72241870-72241889 | MsG0380015589.01.T01:intron | 55.0% | |
| TCATATGGGAGGGGTAGCCT+TGG | - | Chr3:72241869-72241888 | None:intergenic | 55.0% | |
| ! | AGGGGCGTAGCCCTTCATAT+GGG | - | Chr3:72241883-72241902 | None:intergenic | 55.0% |
| CTTCGAGCTTCGCCGCTGAT+TGG | - | Chr3:72241082-72241101 | None:intergenic | 60.0% | |
| GGCGTAGCCCTTCATATGGG+AGG | - | Chr3:72241880-72241899 | None:intergenic | 60.0% | |
| ! | CAGGGGCGTAGCCCTTCATA+TGG | - | Chr3:72241884-72241903 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 72239279 | 72242215 | 72239279 | ID=MsG0380015589.01;Name=MsG0380015589.01 |
| Chr3 | mRNA | 72239279 | 72242215 | 72239279 | ID=MsG0380015589.01.T01;Parent=MsG0380015589.01;Name=MsG0380015589.01.T01;_AED=0.45;_eAED=0.58;_QI=0|0.5|0.28|1|0.5|0.42|7|0|339 |
| Chr3 | exon | 72239279 | 72239421 | 72239279 | ID=MsG0380015589.01.T01:exon:621;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72239567 | 72239872 | 72239567 | ID=MsG0380015589.01.T01:exon:622;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72240069 | 72240130 | 72240069 | ID=MsG0380015589.01.T01:exon:623;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72240225 | 72240373 | 72240225 | ID=MsG0380015589.01.T01:exon:624;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72240916 | 72241044 | 72240916 | ID=MsG0380015589.01.T01:exon:625;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72241771 | 72241795 | 72241771 | ID=MsG0380015589.01.T01:exon:626;Parent=MsG0380015589.01.T01 |
| Chr3 | exon | 72242010 | 72242215 | 72242010 | ID=MsG0380015589.01.T01:exon:627;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72239279 | 72239421 | 72239279 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72239567 | 72239872 | 72239567 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72240069 | 72240130 | 72240069 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72240225 | 72240373 | 72240225 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72240916 | 72241044 | 72240916 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72241771 | 72241795 | 72241771 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Chr3 | CDS | 72242010 | 72242215 | 72242010 | ID=MsG0380015589.01.T01:cds;Parent=MsG0380015589.01.T01 |
| Gene Sequence |
| Protein sequence |
