AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007064.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007064.01.T01 MTR_2g019840 66.162 198 28 2 136 294 184 381 1.36e-75 237
MsG0280007064.01.T01 MTR_2g019840 54.286 140 41 2 1 117 208 347 2.05e-38 140
MsG0280007064.01.T01 MTR_2g019810 58.031 193 42 2 136 289 172 364 1.34e-62 203
MsG0280007064.01.T01 MTR_2g019810 57.857 140 36 2 1 117 196 335 3.57e-45 157
MsG0280007064.01.T01 MTR_4g119550 35.266 207 91 4 129 294 186 390 5.62e-29 115
MsG0280007064.01.T01 MTR_4g119550 34.848 132 61 3 11 117 225 356 1.49e-12 68.2
MsG0280007064.01.T01 MTR_2g436400 34.686 271 115 8 60 284 123 377 3.75e-28 112
MsG0280007064.01.T01 MTR_2g436400 41.667 132 52 3 11 117 222 353 1.11e-20 92.0
MsG0280007064.01.T01 MTR_2g437240 32.639 288 131 8 50 289 131 403 1.95e-27 111
MsG0280007064.01.T01 MTR_2g437240 35.211 142 62 5 1 112 228 369 9.23e-12 65.9
MsG0280007064.01.T01 MTR_2g437030 33.457 269 120 6 72 297 217 469 2.50e-26 108
MsG0280007064.01.T01 MTR_2g437030 37.879 132 57 3 11 117 301 432 4.12e-14 73.2
MsG0280007064.01.T01 MTR_2g019830 75.676 74 18 0 216 289 131 204 3.32e-26 103
MsG0280007064.01.T01 MTR_2g436440 30.068 296 144 9 41 289 102 381 8.16e-26 106
MsG0280007064.01.T01 MTR_2g436440 37.594 133 58 3 13 120 223 355 2.16e-14 73.6
MsG0280007064.01.T01 MTR_2g437120 38.191 199 81 4 133 291 194 390 5.57e-25 104
MsG0280007064.01.T01 MTR_2g437020 32.566 304 143 10 41 297 95 383 1.07e-24 103
MsG0280007064.01.T01 MTR_2g437020 37.879 132 57 3 11 117 216 347 5.65e-14 72.4
MsG0280007064.01.T01 MTR_2g437960 39.286 196 74 7 136 289 199 391 1.12e-24 103
MsG0280007064.01.T01 MTR_2g437960 37.324 142 59 5 1 112 216 357 9.93e-13 68.6
MsG0280007064.01.T01 MTR_2g437960 39.286 196 74 7 136 289 199 391 1.22e-24 103
MsG0280007064.01.T01 MTR_2g437960 31.401 207 96 8 1 163 216 420 7.19e-13 69.3
MsG0280007064.01.T01 MTR_2g437080 31.757 296 139 8 41 289 96 375 8.95e-24 100
MsG0280007064.01.T01 MTR_2g437080 40.517 116 45 2 11 102 215 330 5.88e-15 75.1
MsG0280007064.01.T01 MTR_2g437940 32.624 282 135 8 56 289 85 359 2.12e-23 99.4
MsG0280007064.01.T01 MTR_2g437940 36.620 142 60 5 1 112 184 325 2.70e-11 64.3
MsG0280007064.01.T01 MTR_2g438010 30.201 298 144 9 41 289 126 408 2.80e-23 99.8
MsG0280007064.01.T01 MTR_2g438010 35.374 147 65 5 1 117 233 379 3.21e-11 64.3
MsG0280007064.01.T01 MTR_2g438020 37.436 195 79 4 136 289 250 442 1.20e-22 98.6
MsG0280007064.01.T01 MTR_2g438020 36.620 142 60 5 1 112 267 408 3.51e-11 64.3
MsG0280007064.01.T01 MTR_2g437990 30.464 302 137 10 41 289 106 387 2.56e-22 97.1
MsG0280007064.01.T01 MTR_2g437990 30.332 211 95 8 11 179 227 427 4.32e-11 63.9
MsG0280007064.01.T01 MTR_2g437200 37.895 190 75 4 136 284 211 398 5.14e-22 95.9
MsG0280007064.01.T01 MTR_2g437100 38.542 192 75 5 136 286 208 397 8.15e-22 95.5
MsG0280007064.01.T01 MTR_2g437060 29.499 339 153 11 16 284 63 385 8.81e-22 95.1
MsG0280007064.01.T01 MTR_2g437060 38.298 141 61 4 11 126 230 369 2.99e-14 73.2
MsG0280007064.01.T01 MTR_2g076320 30.743 296 149 8 41 291 106 390 2.86e-21 94.0
MsG0280007064.01.T01 MTR_4g119570 39.506 162 88 4 129 282 70 229 3.43e-21 90.9
MsG0280007064.01.T01 MTR_2g437170 36.316 190 78 4 136 284 203 390 1.07e-20 92.4
MsG0280007064.01.T01 MTR_2g437170 36.620 142 60 5 1 112 220 361 2.78e-11 64.3
MsG0280007064.01.T01 MTR_2g437040 29.520 271 129 7 59 283 115 369 1.30e-20 91.7
MsG0280007064.01.T01 MTR_2g437040 34.615 130 60 3 13 117 217 346 2.78e-12 67.4
MsG0280007064.01.T01 MTR_2g437160 34.010 197 87 4 136 291 208 402 1.31e-20 92.0
MsG0280007064.01.T01 MTR_2g437160 37.500 128 55 4 15 117 244 371 4.49e-11 63.9
MsG0280007064.01.T01 MTR_2g437150 35.354 198 83 5 136 291 203 397 1.56e-20 91.7
MsG0280007064.01.T01 MTR_2g437150 36.496 137 58 4 1 108 220 356 5.57e-11 63.5
MsG0280007064.01.T01 MTR_2g437160 30.093 216 96 4 124 284 89 304 1.42e-19 87.8
MsG0280007064.01.T01 MTR_2g437160 37.500 128 55 4 15 117 153 280 3.23e-11 63.5
MsG0280007064.01.T01 MTR_4g119580 33.846 195 86 5 129 282 178 370 1.39e-18 85.9
MsG0280007064.01.T01 MTR_4g119580 35.374 147 65 5 1 117 202 348 3.86e-12 67.0
MsG0280007064.01.T01 MTR_2g436460 34.536 194 83 5 136 287 188 379 3.48e-18 84.7
MsG0280007064.01.T01 MTR_2g436460 34.694 147 65 5 1 116 205 351 2.02e-12 67.8
MsG0280007064.01.T01 MTR_2g437130 32.143 196 90 4 135 289 183 376 7.60e-18 84.0
MsG0280007064.01.T01 MTR_2g437090 37.179 156 57 3 170 284 3 158 1.61e-17 79.3
MsG0280007064.01.T01 MTR_2g437090 39.370 127 52 4 11 112 3 129 3.03e-13 67.4
MsG0280007064.01.T01 MTR_2g437260 27.000 200 105 3 136 294 177 376 7.14e-17 80.9
MsG0280007064.01.T01 MTR_4g007490 26.176 340 169 14 24 285 36 371 4.52e-14 72.4
MsG0280007064.01.T01 MTR_4g120380 33.775 151 70 4 1 121 202 352 8.51e-13 68.9
MsG0280007064.01.T01 MTR_4g120380 33.775 151 70 4 1 121 202 352 1.51e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 61 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAAGAAGTATTGGATATT+TGG 0.165459 2:-10097619 None:intergenic
AAAACAAACACTCAGAAATT+TGG 0.172074 2:-10103412 None:intergenic
ATTCAAATCCTGCTTCAAAA+TGG 0.214854 2:+10102939 MsG0280007064.01.T01:CDS
TTTGATTAAGGATGCTAAAT+TGG 0.230774 2:+10103379 MsG0280007064.01.T01:CDS
AATACTTCTTATGCTGAGTT+TGG 0.261332 2:+10097629 MsG0280007064.01.T01:CDS
TCAATCCAAAGGTTTGATTA+AGG 0.262442 2:+10097689 MsG0280007064.01.T01:CDS
CTTCCTTTCCCATACGGATT+TGG 0.266732 2:-10097446 None:intergenic
AACAATGAAAACAGTTGTTT+TGG 0.284531 2:-10103075 None:intergenic
ACCAATTTCGAAACAAAATA+AGG 0.302219 2:-10102980 None:intergenic
TTGGTGGAAGTAAATGAATT+AGG 0.343678 2:+10103044 MsG0280007064.01.T01:CDS
TTCAAATCCTGCTTCAAAAT+GGG 0.347056 2:+10102940 MsG0280007064.01.T01:CDS
CTTTGCTGAGTCTTGAGAAA+AGG 0.361020 2:+10103312 MsG0280007064.01.T01:CDS
AGTATTTGAGAAGGCAGTTT+TGG 0.367653 2:+10097355 MsG0280007064.01.T01:CDS
TTGAAATTTCTTGAGTCTAA+AGG 0.377057 2:+10103356 MsG0280007064.01.T01:CDS
GATTGATGTGTATAAGAAAT+GGG 0.377187 2:+10103142 MsG0280007064.01.T01:CDS
TGAGTCTAAAGGTTTGATTA+AGG 0.378829 2:+10103367 MsG0280007064.01.T01:CDS
AGATTGATGTGTATAAGAAA+TGG 0.401224 2:+10103141 MsG0280007064.01.T01:CDS
AGCATCCTTAATCAAACCTT+TGG 0.408692 2:-10097694 None:intergenic
TCTTATGCTGAGTTTGGAAA+AGG 0.411390 2:+10097635 MsG0280007064.01.T01:CDS
AACGCCTTCTCAAATCTTGA+AGG 0.412854 2:-10103023 None:intergenic
ATTAAGGATGCTAAATTGGC+TGG 0.417571 2:+10103383 MsG0280007064.01.T01:CDS
TAGTAAACGTGAGATGAATA+TGG 0.427434 2:+10100886 MsG0280007064.01.T01:CDS
TTTGCTGAGTCTTGAGAAAA+GGG 0.428056 2:+10103313 MsG0280007064.01.T01:CDS
AGACTCAGCAAAGAAGTATT+GGG 0.445660 2:-10103302 None:intergenic
TAAGGGATGAAGATGAACTT+AGG 0.453228 2:+10100843 MsG0280007064.01.T01:CDS
AAACTCAGCATAAGAAGTAT+TGG 0.453268 2:-10097627 None:intergenic
TCTTAGCATGCAGCGCGATA+AGG 0.457183 2:-10097418 None:intergenic
AAGACTCAGCAAAGAAGTAT+TGG 0.463288 2:-10103303 None:intergenic
AAGGGATGAAGATGAACTTA+GGG 0.471063 2:+10100844 MsG0280007064.01.T01:CDS
TTGAAATTTCTTCAATCCAA+AGG 0.481678 2:+10097678 MsG0280007064.01.T01:CDS
GTTTGGAAAAGGGTTATCCT+AGG 0.491635 2:+10097646 MsG0280007064.01.T01:CDS
ACACGACCATGGTCATCTAC+TGG 0.491648 2:+10103588 MsG0280007064.01.T01:CDS
TGGTCATCTACTGGATTTGA+TGG 0.492545 2:+10103597 MsG0280007064.01.T01:CDS
CTTATGCTGAGTTTGGAAAA+GGG 0.495841 2:+10097636 MsG0280007064.01.T01:CDS
CAGAGACTTTGAAAGGTGTA+GGG 0.502615 2:-10097722 None:intergenic
GAAGTTTGTGTATTGCTTCG+AGG 0.509974 2:+10103439 MsG0280007064.01.T01:CDS
TGAAGATGAACTTAGGGATG+TGG 0.518628 2:+10100850 MsG0280007064.01.T01:CDS
AAGATTTGAGAAGGCGTTGG+TGG 0.538322 2:+10103028 MsG0280007064.01.T01:CDS
TCAAATCCTGCTTCAAAATG+GGG 0.541281 2:+10102941 MsG0280007064.01.T01:CDS
ACTGCCTTCTCAAATACTGC+AGG 0.547454 2:-10097350 None:intergenic
TTTGGAAAAGGGTTATCCTA+GGG 0.547987 2:+10097647 MsG0280007064.01.T01:CDS
CAATCTGAGAAGTTACATCA+AGG 0.559433 2:+10103556 MsG0280007064.01.T01:CDS
GAAGTATCCATGGTGTATGT+TGG 0.562557 2:+10097524 MsG0280007064.01.T01:CDS
ATGGTGTATGTTGGCATCTG+TGG 0.563796 2:+10097533 MsG0280007064.01.T01:CDS
TCAGAGACTTTGAAAGGTGT+AGG 0.564549 2:-10097723 None:intergenic
CATCAATCTTCCTTTCCCAA+AGG 0.572836 2:-10103127 None:intergenic
TTCAAGATTTGAGAAGGCGT+TGG 0.575297 2:+10103025 MsG0280007064.01.T01:CDS
GATTGTGATCGCCAATCTCA+CGG 0.576415 2:-10103538 None:intergenic
AATTTCAACGCAAAAGCCCT+AGG 0.586081 2:-10097663 None:intergenic
AATTTCAAGACAAAAGCTCT+AGG 0.592288 2:-10103341 None:intergenic
GAAGCCTTCAAGATTTGAGA+AGG 0.601495 2:+10103019 MsG0280007064.01.T01:CDS
GAAACCTGCAGTATTTGAGA+AGG 0.606941 2:+10097346 MsG0280007064.01.T01:CDS
AGATCCTCAGAGACTTTGAA+AGG 0.621290 2:-10097729 None:intergenic
AAACACTCAGAAATTTGGAA+AGG 0.625518 2:-10103407 None:intergenic
AAAATAAGGACTTTAGACTC+AGG 0.629406 2:-10102966 None:intergenic
AATCTGAGAAGTTACATCAA+GGG 0.642206 2:+10103557 MsG0280007064.01.T01:CDS
GGGTCTCTGCGACACGACCA+TGG 0.642865 2:+10103577 MsG0280007064.01.T01:CDS
AGAGACTTTGAAAGGTGTAG+GGG 0.645255 2:-10097721 None:intergenic
ATTGATGTGTATAAGAAATG+GGG 0.652614 2:+10103143 MsG0280007064.01.T01:CDS
ACAGATGCCAACATACACCA+TGG 0.670800 2:-10097531 None:intergenic
TCAAATCCAGTAGATGACCA+TGG 0.710000 2:-10103594 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAATAAAAAAATCCTT+TGG + Chr2:10103111-10103130 MsG0280007064.01.T01:CDS 10.0%
!! AAATTTCTATCAAAATAAAA+GGG - Chr2:10098650-10098669 None:intergenic 10.0%
!! AATTAATAAAAAAATCCTTT+GGG + Chr2:10103112-10103131 MsG0280007064.01.T01:CDS 10.0%
!! CAATTAAGTATAATATTTAA+TGG + Chr2:10101608-10101627 MsG0280007064.01.T01:intron 10.0%
!! TAACATAACATTTATATTAT+AGG + Chr2:10101905-10101924 MsG0280007064.01.T01:intron 10.0%
!!! TAAAAGTTCTTTTATATTTT+GGG + Chr2:10099595-10099614 MsG0280007064.01.T01:intron 10.0%
!!! TTAAAAGTTCTTTTATATTT+TGG + Chr2:10099594-10099613 MsG0280007064.01.T01:intron 10.0%
!!! TTAACATTTATTTTCAAATT+TGG - Chr2:10101095-10101114 None:intergenic 10.0%
!!! TTTTTTTTAACAAGTAAAAA+TGG - Chr2:10100942-10100961 None:intergenic 10.0%
!! AAAAAAAAAGTCATTGAAAT+TGG + Chr2:10100954-10100973 MsG0280007064.01.T01:intron 15.0%
!! ACTTTATGATATATGAATTA+CGG - Chr2:10099986-10100005 None:intergenic 15.0%
!! CAAATTTCTATCAAAATAAA+AGG - Chr2:10098651-10098670 None:intergenic 15.0%
!! CGACAATATAATATAATATT+TGG - Chr2:10100699-10100718 None:intergenic 15.0%
!! TAAACTAAAATATTTACACA+TGG - Chr2:10099015-10099034 None:intergenic 15.0%
!! TTATTAAATACTCAATGTAA+TGG - Chr2:10101656-10101675 None:intergenic 15.0%
!!! ATATAATATGATTTTTCTTG+TGG + Chr2:10098263-10098282 MsG0280007064.01.T01:intron 15.0%
!!! CTTTTATTTTGATAGAAATT+TGG + Chr2:10098649-10098668 MsG0280007064.01.T01:intron 15.0%
!!! TATTATAATACTTTTTCAAG+CGG + Chr2:10100768-10100787 MsG0280007064.01.T01:intron 15.0%
!!! TTTTGATAAAATGATAACAA+GGG - Chr2:10102838-10102857 None:intergenic 15.0%
!! AAATTCTATAAAGGACTATA+AGG - Chr2:10098988-10099007 None:intergenic 20.0%
!! AATTATTCTTATTCAGTTTG+TGG + Chr2:10098617-10098636 MsG0280007064.01.T01:intron 20.0%
!! ATTTATATTATAGGCATGTT+TGG + Chr2:10101914-10101933 MsG0280007064.01.T01:intron 20.0%
!! ATTTATTGAGTCAAATGTTA+TGG + Chr2:10100798-10100817 MsG0280007064.01.T01:intron 20.0%
!! TAGTTCTTACATACAAAATT+GGG - Chr2:10101466-10101485 None:intergenic 20.0%
!! TCTAATCATCTAATGTATTT+GGG + Chr2:10099362-10099381 MsG0280007064.01.T01:intron 20.0%
!! TTATTCAGGGATTTATAAAA+AGG + Chr2:10100262-10100281 MsG0280007064.01.T01:intron 20.0%
!! TTATTGTATTATATTGTACG+TGG + Chr2:10101053-10101072 MsG0280007064.01.T01:intron 20.0%
!! TTTGATAAAATGATAACAAG+GGG - Chr2:10102837-10102856 None:intergenic 20.0%
!!! ACTTTTTTTCTTTCTTCTTA+GGG - Chr2:10100345-10100364 None:intergenic 20.0%
!!! ATCAACATGAGTATATATTT+TGG + Chr2:10098136-10098155 MsG0280007064.01.T01:intron 20.0%
!!! ATTATAATACTTTTTCAAGC+GGG + Chr2:10100769-10100788 MsG0280007064.01.T01:intron 20.0%
!!! CATTTTTCATATCATAATAG+TGG - Chr2:10101795-10101814 None:intergenic 20.0%
!!! CTTTTGATAAAATGATAACA+AGG - Chr2:10102839-10102858 None:intergenic 20.0%
!!! GTGTTCTAGTTTTTTTTTAA+GGG - Chr2:10100377-10100396 None:intergenic 20.0%
!!! TACTTTTTTTCTTTCTTCTT+AGG - Chr2:10100346-10100365 None:intergenic 20.0%
!!! TATGTTAACTTGTGTATTTT+AGG - Chr2:10101892-10101911 None:intergenic 20.0%
!!! TATTTTCAACTCATTTTAGT+TGG - Chr2:10101228-10101247 None:intergenic 20.0%
!!! TTAGTTCTTACATACAAAAT+TGG - Chr2:10101467-10101486 None:intergenic 20.0%
!!! TTATGTTTTGCTAAATACTT+AGG + Chr2:10099450-10099469 MsG0280007064.01.T01:intron 20.0%
!!! TTGAAATAGTCTAGTTTAAT+TGG + Chr2:10097981-10098000 MsG0280007064.01.T01:intron 20.0%
! AAAAAGTCATTGAAATTGGA+AGG + Chr2:10100958-10100977 MsG0280007064.01.T01:intron 25.0%
! AAAACAAACACTCAGAAATT+TGG - Chr2:10103415-10103434 None:intergenic 25.0%
! AAAGTATAGGATCATTTAGT+TGG - Chr2:10101497-10101516 None:intergenic 25.0%
! AACTAATTTCCTTTGTAGAA+GGG + Chr2:10099566-10099585 MsG0280007064.01.T01:intron 25.0%
! AACTATCTCATTCAAAATCT+TGG + Chr2:10102531-10102550 MsG0280007064.01.T01:intron 25.0%
! ACCAATTTCGAAACAAAATA+AGG - Chr2:10102983-10103002 None:intergenic 25.0%
! ACTATCTCATTCAAAATCTT+GGG + Chr2:10102532-10102551 MsG0280007064.01.T01:intron 25.0%
! AGAAAAAAGATGTTTCCAAT+AGG + Chr2:10103495-10103514 MsG0280007064.01.T01:CDS 25.0%
! AGATTAATGCGTATAAGAAA+TGG + Chr2:10097467-10097486 MsG0280007064.01.T01:intron 25.0%
! AGATTGATGTGTATAAGAAA+TGG + Chr2:10103141-10103160 MsG0280007064.01.T01:CDS 25.0%
! ATAAGGAAAAACGTATTGTT+AGG - Chr2:10097404-10097423 None:intergenic 25.0%
! ATAGGATAAAATGCTATAGA+TGG + Chr2:10099756-10099775 MsG0280007064.01.T01:intron 25.0%
! ATATGACTATATACCATGTT+TGG - Chr2:10098247-10098266 None:intergenic 25.0%
! ATGAAGTTAGTATCTTAGTT+TGG - Chr2:10102247-10102266 None:intergenic 25.0%
! ATTAAACAAGATGAGTAATG+TGG - Chr2:10099239-10099258 None:intergenic 25.0%
! ATTAATGCGTATAAGAAATG+GGG + Chr2:10097469-10097488 MsG0280007064.01.T01:intron 25.0%
! ATTGATGTGTATAAGAAATG+GGG + Chr2:10103143-10103162 MsG0280007064.01.T01:CDS 25.0%
! CATGTGATTTGAATAATGAA+AGG - Chr2:10102629-10102648 None:intergenic 25.0%
! CTAATCATCTAATGTATTTG+GGG + Chr2:10099363-10099382 MsG0280007064.01.T01:intron 25.0%
! CTTTCATTATTCAAATCACA+TGG + Chr2:10102627-10102646 MsG0280007064.01.T01:intron 25.0%
! GAGATTCATATTTAGACTAT+AGG + Chr2:10098844-10098863 MsG0280007064.01.T01:intron 25.0%
! GATGATCAAGTAACAAAATA+TGG - Chr2:10098030-10098049 None:intergenic 25.0%
! GATTAATGCGTATAAGAAAT+GGG + Chr2:10097468-10097487 MsG0280007064.01.T01:intron 25.0%
! GATTGATGTGTATAAGAAAT+GGG + Chr2:10103142-10103161 MsG0280007064.01.T01:CDS 25.0%
! GCAAAAAAGAGTGAAATTTA+AGG - Chr2:10098203-10098222 None:intergenic 25.0%
! GTCTAATCATCTAATGTATT+TGG + Chr2:10099361-10099380 MsG0280007064.01.T01:intron 25.0%
! GTTATATATGAAACTTTCCA+AGG + Chr2:10100180-10100199 MsG0280007064.01.T01:intron 25.0%
! TAACTAATTTCCTTTGTAGA+AGG + Chr2:10099565-10099584 MsG0280007064.01.T01:intron 25.0%
! TAGAAATACTTGTTTGACAA+CGG + Chr2:10098098-10098117 MsG0280007064.01.T01:intron 25.0%
! TATGACTATATACCATGTTT+GGG - Chr2:10098246-10098265 None:intergenic 25.0%
! TCTCTATAAAATATGGTCTT+TGG + Chr2:10098171-10098190 MsG0280007064.01.T01:intron 25.0%
! TGAAATTGGAAGGAAAAAAA+GGG + Chr2:10100968-10100987 MsG0280007064.01.T01:intron 25.0%
! TTAGTTTCACATCAACAATT+AGG + Chr2:10099059-10099078 MsG0280007064.01.T01:intron 25.0%
! TTGAAATTGGAAGGAAAAAA+AGG + Chr2:10100967-10100986 MsG0280007064.01.T01:intron 25.0%
! TTGAAATTTCTTCAATCCAA+AGG + Chr2:10097678-10097697 MsG0280007064.01.T01:CDS 25.0%
! TTGAAATTTCTTGAGTCTAA+AGG + Chr2:10103356-10103375 MsG0280007064.01.T01:CDS 25.0%
! TTGTCAACGATATTTAGTAA+TGG - Chr2:10101577-10101596 None:intergenic 25.0%
! TTTGATTAAGGATGCTAAAT+TGG + Chr2:10103379-10103398 MsG0280007064.01.T01:CDS 25.0%
!! AACAATGAAAACAGTTGTTT+TGG - Chr2:10103078-10103097 None:intergenic 25.0%
!! AAGATTTTGAATGAGATAGT+TGG - Chr2:10102532-10102551 None:intergenic 25.0%
!! AAGCTTTTATAAAAGATAGC+AGG - Chr2:10102800-10102819 None:intergenic 25.0%
!! ATAAAAAAATCCTTTGGGAA+AGG + Chr2:10103117-10103136 MsG0280007064.01.T01:CDS 25.0%
!! GATCTAAAGAGAGAATTTTT+GGG - Chr2:10102691-10102710 None:intergenic 25.0%
!! GGAGTTAGAAATTTTATTCA+GGG + Chr2:10100249-10100268 MsG0280007064.01.T01:intron 25.0%
!! TGCTATCTTTTATAAAAGCT+TGG + Chr2:10102799-10102818 MsG0280007064.01.T01:intron 25.0%
!! TTTCTGAGTTTCTCTATTTT+AGG + Chr2:10100536-10100555 MsG0280007064.01.T01:intron 25.0%
!! TTTGTTATACATGTGCATTT+AGG + Chr2:10098684-10098703 MsG0280007064.01.T01:intron 25.0%
!! TTTTACGAACATAATTGATC+AGG - Chr2:10100594-10100613 None:intergenic 25.0%
!! TTTTGTGATATTAGCAATGA+TGG + Chr2:10098950-10098969 MsG0280007064.01.T01:intron 25.0%
!!! AAGTTCTTTTATATTTTGGG+AGG + Chr2:10099598-10099617 MsG0280007064.01.T01:intron 25.0%
!!! AATCTTTTTCAACATCCTAT+TGG - Chr2:10103513-10103532 None:intergenic 25.0%
!!! AATGAGTTTCATGATTTGTT+AGG + Chr2:10101292-10101311 MsG0280007064.01.T01:intron 25.0%
!!! ACAATGAAAACAGTTGTTTT+GGG - Chr2:10103077-10103096 None:intergenic 25.0%
!!! AGTTCTTTTATATTTTGGGA+GGG + Chr2:10099599-10099618 MsG0280007064.01.T01:intron 25.0%
!!! ATGAGTTTCATGATTTGTTA+GGG + Chr2:10101293-10101312 MsG0280007064.01.T01:intron 25.0%
!!! ATGTCATTTTCTTATTTGTG+AGG + Chr2:10100662-10100681 MsG0280007064.01.T01:intron 25.0%
!!! CAAGTATTTCTAGTCTAAAA+AGG - Chr2:10098090-10098109 None:intergenic 25.0%
!!! CATAAGAAGTATTGGATATT+TGG - Chr2:10097622-10097641 None:intergenic 25.0%
!!! CGTGTTCTAGTTTTTTTTTA+AGG - Chr2:10100378-10100397 None:intergenic 25.0%
!!! CTCAATAAACCTTTTTTTAC+AGG + Chr2:10100495-10100514 MsG0280007064.01.T01:intron 25.0%
!!! GAAATTTTTTGTTGATCACA+TGG + Chr2:10103248-10103267 MsG0280007064.01.T01:intron 25.0%
!!! GTTTTGGAAGTAAAACAATT+AGG + Chr2:10097371-10097390 MsG0280007064.01.T01:CDS 25.0%
!!! TAAACCTTTTTTTACAGGAA+AGG + Chr2:10100500-10100519 MsG0280007064.01.T01:intron 25.0%
!!! TAGCAAAACATAACTTGTTT+AGG - Chr2:10099443-10099462 None:intergenic 25.0%
!!! TCCTTATTTTGTTTCGAAAT+TGG + Chr2:10102979-10102998 MsG0280007064.01.T01:CDS 25.0%
!!! TGAGTATATATTTTGGTACA+CGG + Chr2:10098143-10098162 MsG0280007064.01.T01:intron 25.0%
!!! TGTCATTTTCTTATTTGTGA+GGG + Chr2:10100663-10100682 MsG0280007064.01.T01:intron 25.0%
!!! TTATAATACTTTTTCAAGCG+GGG + Chr2:10100770-10100789 MsG0280007064.01.T01:intron 25.0%
!!! TTTAGAACCTTTTTTGAAGA+TGG + Chr2:10097904-10097923 MsG0280007064.01.T01:intron 25.0%
AAAACCAACATAATGTGAGA+AGG + Chr2:10098361-10098380 MsG0280007064.01.T01:intron 30.0%
AAAATAACATCCTATACCTC+AGG - Chr2:10098797-10098816 None:intergenic 30.0%
AAAATAAGGACTTTAGACTC+AGG - Chr2:10102969-10102988 None:intergenic 30.0%
AAAATTGAGTTTGGGAAGAA+TGG - Chr2:10102723-10102742 None:intergenic 30.0%
AAACACTCAGAAATTTGGAA+AGG - Chr2:10103410-10103429 None:intergenic 30.0%
AAACTGAATGTGAGGTTATT+GGG - Chr2:10102419-10102438 None:intergenic 30.0%
AATACTTCTTATGCTGAGTT+TGG + Chr2:10097629-10097648 MsG0280007064.01.T01:CDS 30.0%
AATCAGAGTAACAAGATTGT+TGG - Chr2:10102339-10102358 None:intergenic 30.0%
AATCTGAGAAGTTACATCAA+GGG + Chr2:10103557-10103576 MsG0280007064.01.T01:CDS 30.0%
AATGTGATCTTGCTTGAAAT+AGG + Chr2:10099256-10099275 MsG0280007064.01.T01:intron 30.0%
AATTTCAAGACAAAAGCTCT+AGG - Chr2:10103344-10103363 None:intergenic 30.0%
AGACTTATCTCTTCAATTAG+AGG + Chr2:10100227-10100246 MsG0280007064.01.T01:intron 30.0%
AGAGATAAGTCTCAAAACAA+TGG - Chr2:10100219-10100238 None:intergenic 30.0%
AGATCCTTTCCTGTAAAAAA+AGG - Chr2:10100507-10100526 None:intergenic 30.0%
AGTCAATTATGTTACACTAC+CGG + Chr2:10100425-10100444 MsG0280007064.01.T01:intron 30.0%
ATAAAAGATAGCAGGATTTC+TGG - Chr2:10102792-10102811 None:intergenic 30.0%
ATAAAATGCTATAGATGGAG+CGG + Chr2:10099761-10099780 MsG0280007064.01.T01:intron 30.0%
ATATGTGCCATCTTCAAAAA+AGG - Chr2:10097914-10097933 None:intergenic 30.0%
ATTAATCTTCCTTTCCCATA+CGG - Chr2:10097455-10097474 None:intergenic 30.0%
ATTCAAATCCTGCTTCAAAA+TGG + Chr2:10102939-10102958 MsG0280007064.01.T01:CDS 30.0%
ATTTATAAAAAGGAGGAAGG+AGG + Chr2:10100272-10100291 MsG0280007064.01.T01:intron 30.0%
CATGGCATCAAATTCTATAA+AGG - Chr2:10098997-10099016 None:intergenic 30.0%
GACTTATCTCTTCAATTAGA+GGG + Chr2:10100228-10100247 MsG0280007064.01.T01:intron 30.0%
GAGAACTTGATACAAAGTAT+AGG - Chr2:10101510-10101529 None:intergenic 30.0%
GAGAGAAGAAAATTGAGTTT+GGG - Chr2:10102731-10102750 None:intergenic 30.0%
GATGCTTCAACTTTCAAATA+AGG + Chr2:10097823-10097842 MsG0280007064.01.T01:intron 30.0%
GGTGATGTCTCTATAAAATA+TGG + Chr2:10098164-10098183 MsG0280007064.01.T01:intron 30.0%
GTAACGAATAACGATATGTA+GGG + Chr2:10100990-10101009 MsG0280007064.01.T01:intron 30.0%
TAAAGGACTATAAGGATCTA+TGG - Chr2:10098980-10098999 None:intergenic 30.0%
TAAGCACTTGTGTAATAGAA+GGG - Chr2:10099216-10099235 None:intergenic 30.0%
TAATAATTGTGTTGTAACCC+CGG + Chr2:10099087-10099106 MsG0280007064.01.T01:intron 30.0%
TAGTAAACGTGAGATGAATA+TGG + Chr2:10100886-10100905 MsG0280007064.01.T01:CDS 30.0%
TATCTTCTGCAAAATCTGTT+CGG - Chr2:10100027-10100046 None:intergenic 30.0%
TCAATCCAAAGGTTTGATTA+AGG + Chr2:10097689-10097708 MsG0280007064.01.T01:CDS 30.0%
TGAGAGAAGAAAATTGAGTT+TGG - Chr2:10102732-10102751 None:intergenic 30.0%
TGAGTCTAAAGGTTTGATTA+AGG + Chr2:10103367-10103386 MsG0280007064.01.T01:CDS 30.0%
TGGAAATATGAGATACGAAA+TGG + Chr2:10100126-10100145 MsG0280007064.01.T01:intron 30.0%
TGGAAGAGGATAATTAACTT+TGG - Chr2:10099837-10099856 None:intergenic 30.0%
TGTTATCATAAGCAAAGAAC+TGG - Chr2:10098320-10098339 None:intergenic 30.0%
TTAACTAATCCCTTCTACAA+AGG - Chr2:10099578-10099597 None:intergenic 30.0%
TTATGGATGAAATGAAGCTT+CGG + Chr2:10100815-10100834 MsG0280007064.01.T01:intron 30.0%
TTCAAATCCTGCTTCAAAAT+GGG + Chr2:10102940-10102959 MsG0280007064.01.T01:CDS 30.0%
TTCAGGGATTTATAAAAAGG+AGG + Chr2:10100265-10100284 MsG0280007064.01.T01:intron 30.0%
TTGATATTGCTTGACCTATA+GGG + Chr2:10099645-10099664 MsG0280007064.01.T01:intron 30.0%
TTGGTGGAAGTAAATGAATT+AGG + Chr2:10103044-10103063 MsG0280007064.01.T01:CDS 30.0%
TTGTCTCTTAATCGATTATG+TGG - Chr2:10101408-10101427 None:intergenic 30.0%
TTGTTGATCACATGGATATT+TGG + Chr2:10103256-10103275 MsG0280007064.01.T01:intron 30.0%
! AAACTCAGCATAAGAAGTAT+TGG - Chr2:10097630-10097649 None:intergenic 30.0%
! ACTCAATTTTCTTCTCTCAA+AGG + Chr2:10102733-10102752 MsG0280007064.01.T01:intron 30.0%
! ATAATATTTAATGGGTCACG+AGG + Chr2:10101617-10101636 MsG0280007064.01.T01:intron 30.0%
! ATGAAGATTGTGTTACTGTT+AGG - Chr2:10102448-10102467 None:intergenic 30.0%
! CTCAATTTTCTTCTCTCAAA+GGG + Chr2:10102734-10102753 MsG0280007064.01.T01:intron 30.0%
! GGAGAGTGTATTTAGATAAA+TGG - Chr2:10101700-10101719 None:intergenic 30.0%
! GGATCTAAAGAGAGAATTTT+TGG - Chr2:10102692-10102711 None:intergenic 30.0%
! GGGAGTTAGAAATTTTATTC+AGG + Chr2:10100248-10100267 MsG0280007064.01.T01:intron 30.0%
! TGAAGATTGTGTTACTGTTA+GGG - Chr2:10102447-10102466 None:intergenic 30.0%
! TTGAATTTTGTTGGAGAGTT+TGG - Chr2:10102577-10102596 None:intergenic 30.0%
! TTGTTACTTGATCATCCTAT+AGG + Chr2:10098034-10098053 MsG0280007064.01.T01:intron 30.0%
!! AGTTAGTCTTAATGTTGTTG+TGG + Chr2:10099928-10099947 MsG0280007064.01.T01:intron 30.0%
!! CAATGAAAACAGTTGTTTTG+GGG - Chr2:10103076-10103095 None:intergenic 30.0%
!! GTTCTTTTATATTTTGGGAG+GGG + Chr2:10099600-10099619 MsG0280007064.01.T01:intron 30.0%
!! TAATAGTGGATAAAAGCTTG+TGG - Chr2:10101781-10101800 None:intergenic 30.0%
!!! CAGTTTTTTGTCAATCACAT+GGG + Chr2:10097576-10097595 MsG0280007064.01.T01:CDS 30.0%
!!! TATAATACTTTTTCAAGCGG+GGG + Chr2:10100771-10100790 MsG0280007064.01.T01:intron 30.0%
!!! TTGGGAAGAATGGTTTTATT+GGG - Chr2:10102713-10102732 None:intergenic 30.0%
!!! TTTGGGAAGAATGGTTTTAT+TGG - Chr2:10102714-10102733 None:intergenic 30.0%
AACTGAATGTGAGGTTATTG+GGG - Chr2:10102418-10102437 None:intergenic 35.0%
AAGATGAAGAAGAAAAGGGT+TGG - Chr2:10102487-10102506 None:intergenic 35.0%
AAGGGATGAAGATGAACTTA+GGG + Chr2:10100844-10100863 MsG0280007064.01.T01:CDS 35.0%
AATAATGAAAGGACTGAGTC+TGG - Chr2:10102618-10102637 None:intergenic 35.0%
ACAAATTTGTCCCCTAAGAA+AGG - Chr2:10101443-10101462 None:intergenic 35.0%
ACACAATGAAGGAATCCTAT+AGG - Chr2:10098052-10098071 None:intergenic 35.0%
ACTAGAACACGTTAGTTGTT+AGG + Chr2:10100387-10100406 MsG0280007064.01.T01:intron 35.0%
ACTATTTCAAACCCCCAAAA+AGG - Chr2:10097971-10097990 None:intergenic 35.0%
AGACACACCTAATCTATCAT+GGG - Chr2:10099345-10099364 None:intergenic 35.0%
AGAGATATGTGAATGCTATG+AGG + Chr2:10097759-10097778 MsG0280007064.01.T01:intron 35.0%
AGCATCCTTAATCAAACCTT+TGG - Chr2:10097697-10097716 None:intergenic 35.0%
AGCTAACTAGGAAATACTTG+TGG - Chr2:10098429-10098448 None:intergenic 35.0%
AGGACAAGCTCATATTATCA+TGG - Chr2:10101541-10101560 None:intergenic 35.0%
AGGATTCCTTCATTGTGTAA+GGG + Chr2:10098054-10098073 MsG0280007064.01.T01:intron 35.0%
AGGTACATTTACATTGTCCT+TGG + Chr2:10101735-10101754 MsG0280007064.01.T01:intron 35.0%
ATAGAAATTTGGTCAGTAGC+AGG + Chr2:10098660-10098679 MsG0280007064.01.T01:intron 35.0%
ATCTTCTGCAAAATCTGTTC+GGG - Chr2:10100026-10100045 None:intergenic 35.0%
ATGTGTATAAGAAATGGGGT+TGG + Chr2:10103147-10103166 MsG0280007064.01.T01:intron 35.0%
ATGTTCGGTACTCACAAAAA+CGG + Chr2:10099733-10099752 MsG0280007064.01.T01:intron 35.0%
ATTAAGGATGCTAAATTGGC+TGG + Chr2:10103383-10103402 MsG0280007064.01.T01:CDS 35.0%
CAATCTGAGAAGTTACATCA+AGG + Chr2:10103556-10103575 MsG0280007064.01.T01:CDS 35.0%
CACATATATGCAACTTGAAG+TGG + Chr2:10097927-10097946 MsG0280007064.01.T01:intron 35.0%
CGATATTAAGCTGACACAAA+TGG + Chr2:10097869-10097888 MsG0280007064.01.T01:intron 35.0%
CTTATGCTGAGTTTGGAAAA+GGG + Chr2:10097636-10097655 MsG0280007064.01.T01:CDS 35.0%
GAAACTGAATGTGAGGTTAT+TGG - Chr2:10102420-10102439 None:intergenic 35.0%
GGGATTTATAAAAAGGAGGA+AGG + Chr2:10100269-10100288 MsG0280007064.01.T01:intron 35.0%
GGTAACGAATAACGATATGT+AGG + Chr2:10100989-10101008 MsG0280007064.01.T01:intron 35.0%
GGTCTCAAGCTAAATATCAT+CGG + Chr2:10101201-10101220 MsG0280007064.01.T01:intron 35.0%
GTAAGCACTTGTGTAATAGA+AGG - Chr2:10099217-10099236 None:intergenic 35.0%
GTTGATATTGCTTGACCTAT+AGG + Chr2:10099644-10099663 MsG0280007064.01.T01:intron 35.0%
TAAAATACCAGTGCAAGGTT+AGG - Chr2:10098760-10098779 None:intergenic 35.0%
TAAGGGATGAAGATGAACTT+AGG + Chr2:10100843-10100862 MsG0280007064.01.T01:CDS 35.0%
TAGACACACCTAATCTATCA+TGG - Chr2:10099346-10099365 None:intergenic 35.0%
TAGGATTCCTTCATTGTGTA+AGG + Chr2:10098053-10098072 MsG0280007064.01.T01:intron 35.0%
TCAAATCCTGCTTCAAAATG+GGG + Chr2:10102941-10102960 MsG0280007064.01.T01:CDS 35.0%
TCTTAATCGATTATGTGGAC+TGG - Chr2:10101403-10101422 None:intergenic 35.0%
TCTTATGCTGAGTTTGGAAA+AGG + Chr2:10097635-10097654 MsG0280007064.01.T01:CDS 35.0%
TGAGAAGGATGGTCTTTATT+CGG + Chr2:10098376-10098395 MsG0280007064.01.T01:intron 35.0%
TGAGTCATAGACCTTTCTTA+GGG + Chr2:10101429-10101448 MsG0280007064.01.T01:intron 35.0%
TGCTGAGACAATAACTTCAT+CGG - Chr2:10097500-10097519 None:intergenic 35.0%
TTGAGTCATAGACCTTTCTT+AGG + Chr2:10101428-10101447 MsG0280007064.01.T01:intron 35.0%
TTTGCTGAGTCTTGAGAAAA+GGG + Chr2:10103313-10103332 MsG0280007064.01.T01:CDS 35.0%
TTTGGAAAAGGGTTATCCTA+GGG + Chr2:10097647-10097666 MsG0280007064.01.T01:CDS 35.0%
TTTGTGTCAGCTTAATATCG+TGG - Chr2:10097869-10097888 None:intergenic 35.0%
! AAGACTCAGCAAAGAAGTAT+TGG - Chr2:10103306-10103325 None:intergenic 35.0%
! AAGATTAGTCCAAATCCGTA+TGG + Chr2:10097437-10097456 MsG0280007064.01.T01:intron 35.0%
! AAGATTTTAAGCCGTGAGAT+TGG + Chr2:10103527-10103546 MsG0280007064.01.T01:CDS 35.0%
! AGATTAGTCCAAATCCGTAT+GGG + Chr2:10097438-10097457 MsG0280007064.01.T01:intron 35.0%
! AGTATTTGAGAAGGCAGTTT+TGG + Chr2:10097355-10097374 MsG0280007064.01.T01:CDS 35.0%
! AGTCTAGTTTAATTGGTGAG+TGG + Chr2:10097988-10098007 MsG0280007064.01.T01:intron 35.0%
! AGTTTTCCCTTACACAATGA+AGG - Chr2:10098063-10098082 None:intergenic 35.0%
! GTCTCAAAACAATGGTTCTA+AGG - Chr2:10100211-10100230 None:intergenic 35.0%
! GTGTTGTGCTTTTAATCTTG+TGG + Chr2:10098894-10098913 MsG0280007064.01.T01:intron 35.0%
! TTCTGGTGATGATTTGAACA+AGG - Chr2:10102775-10102794 None:intergenic 35.0%
! TTCTTATTTGTGAGGGACTA+AGG + Chr2:10100670-10100689 MsG0280007064.01.T01:intron 35.0%
! TTGTTTGAAGTTATGCTCAC+TGG - Chr2:10099502-10099521 None:intergenic 35.0%
! TTTTCCCATCATTGCTGAAA+AGG + Chr2:10100103-10100122 MsG0280007064.01.T01:intron 35.0%
! TTTTGATGAGAGTGATAGCT+GGG - Chr2:10102664-10102683 None:intergenic 35.0%
! TTTTGTCAATCACATGGGTT+GGG + Chr2:10097581-10097600 MsG0280007064.01.T01:CDS 35.0%
! TTTTTGTCAATCACATGGGT+TGG + Chr2:10097580-10097599 MsG0280007064.01.T01:CDS 35.0%
!! AAGCTTTAAAATTGAGCGAG+TGG - Chr2:10098471-10098490 None:intergenic 35.0%
!! AGACTCAGCAAAGAAGTATT+GGG - Chr2:10103305-10103324 None:intergenic 35.0%
!! AGCTTTAAAATTGAGCGAGT+GGG - Chr2:10098470-10098489 None:intergenic 35.0%
!! GGTTGTGAAAGTGTGATTTT+GGG - Chr2:10102511-10102530 None:intergenic 35.0%
!! GTAATGGACTTAACACAAAG+AGG - Chr2:10101561-10101580 None:intergenic 35.0%
!! GTTGTGAAAGTGTGATTTTG+GGG - Chr2:10102510-10102529 None:intergenic 35.0%
!! TGGTTGTGAAAGTGTGATTT+TGG - Chr2:10102512-10102531 None:intergenic 35.0%
!!! CAGCATTTTTGAAGTATCCA+TGG + Chr2:10103188-10103207 MsG0280007064.01.T01:intron 35.0%
!!! GCAGTTTTTTGTCAATCACA+TGG + Chr2:10097575-10097594 MsG0280007064.01.T01:CDS 35.0%
!!! GTCGTTGAGTTGAATTTTGT+TGG - Chr2:10102586-10102605 None:intergenic 35.0%
!!! TCAGCATTTTGAAGTATCCA+TGG + Chr2:10097514-10097533 MsG0280007064.01.T01:intron 35.0%
AACGCCTTCTCAAATCTTGA+AGG - Chr2:10103026-10103045 None:intergenic 40.0%
AATGAAGCTTCGGCTAGATA+AGG + Chr2:10100825-10100844 MsG0280007064.01.T01:intron 40.0%
AATTTCAACGCAAAAGCCCT+AGG - Chr2:10097666-10097685 None:intergenic 40.0%
AGACTATAGGATGCGCATTT+AGG + Chr2:10098857-10098876 MsG0280007064.01.T01:intron 40.0%
AGATCCTCAGAGACTTTGAA+AGG - Chr2:10097732-10097751 None:intergenic 40.0%
ATGAAGCTTCGGCTAGATAA+GGG + Chr2:10100826-10100845 MsG0280007064.01.T01:intron 40.0%
ATGCGTATAAGAAATGGGGT+TGG + Chr2:10097473-10097492 MsG0280007064.01.T01:intron 40.0%
ATTATCCTCTTCCAAGTCTC+AGG + Chr2:10099843-10099862 MsG0280007064.01.T01:intron 40.0%
ATTCCTGCCCATGATAGATT+AGG + Chr2:10099335-10099354 MsG0280007064.01.T01:intron 40.0%
CAGAGTAAAATACCAGTGCA+AGG - Chr2:10098765-10098784 None:intergenic 40.0%
CATCAATCTTCCTTTCCCAA+AGG - Chr2:10103130-10103149 None:intergenic 40.0%
CATCTGAGTGTCAATTTCGA+TGG - Chr2:10101145-10101164 None:intergenic 40.0%
CATGGATATTTGGAAGCCTA+TGG + Chr2:10103266-10103285 MsG0280007064.01.T01:intron 40.0%
CATTCATTCATGCCCAAACA+TGG + Chr2:10098231-10098250 MsG0280007064.01.T01:intron 40.0%
CCAACATAATGTGAGAAGGA+TGG + Chr2:10098365-10098384 MsG0280007064.01.T01:intron 40.0%
CCATCCTTCTCACATTATGT+TGG - Chr2:10098368-10098387 None:intergenic 40.0%
CTCATGTTGTTCCACTGATA+TGG + Chr2:10100080-10100099 MsG0280007064.01.T01:intron 40.0%
CTTTGCTGAGTCTTGAGAAA+AGG + Chr2:10103312-10103331 MsG0280007064.01.T01:CDS 40.0%
GAAACCTGCAGTATTTGAGA+AGG + Chr2:10097346-10097365 MsG0280007064.01.T01:CDS 40.0%
GAAGCCTTCAAGATTTGAGA+AGG + Chr2:10103019-10103038 MsG0280007064.01.T01:CDS 40.0%
GAAGGAGGTAGTACTTATAG+TGG + Chr2:10100287-10100306 MsG0280007064.01.T01:intron 40.0%
GAAGTTTGTGTATTGCTTCG+AGG + Chr2:10103439-10103458 MsG0280007064.01.T01:CDS 40.0%
GAGTCATAGACCTTTCTTAG+GGG + Chr2:10101430-10101449 MsG0280007064.01.T01:intron 40.0%
GCAATATCCATCTGTACTAC+AGG + Chr2:10099958-10099977 MsG0280007064.01.T01:intron 40.0%
GGGGAAGATGAAGAAGAAAA+GGG - Chr2:10102491-10102510 None:intergenic 40.0%
GTACTCACAAATACTGGTGA+TGG + Chr2:10099683-10099702 MsG0280007064.01.T01:intron 40.0%
GTCCTACACATGAACAAGTA+AGG - Chr2:10099131-10099150 None:intergenic 40.0%
GTGTTGTGCTTCTGGTAATA+GGG + Chr2:10098721-10098740 MsG0280007064.01.T01:intron 40.0%
GTTTGGAAAAGGGTTATCCT+AGG + Chr2:10097646-10097665 MsG0280007064.01.T01:CDS 40.0%
TAAGCAAAGAACTGGACAGT+AGG - Chr2:10098312-10098331 None:intergenic 40.0%
TACACCTTTCAAAGTCTCTG+AGG + Chr2:10097725-10097744 MsG0280007064.01.T01:intron 40.0%
TCAAATCCAGTAGATGACCA+TGG - Chr2:10103597-10103616 None:intergenic 40.0%
TGAAGATGAACTTAGGGATG+TGG + Chr2:10100850-10100869 MsG0280007064.01.T01:CDS 40.0%
TGATGGGAAAACCATATCAG+TGG - Chr2:10100094-10100113 None:intergenic 40.0%
TGATGTTCCTAACGCATAGT+TGG + Chr2:10098533-10098552 MsG0280007064.01.T01:intron 40.0%
TGCCTTACTTGTTCATGTGT+AGG + Chr2:10099126-10099145 MsG0280007064.01.T01:intron 40.0%
TGGCATCTGTTCGTAAATTG+AGG + Chr2:10103218-10103237 MsG0280007064.01.T01:intron 40.0%
TGGGGAAGATGAAGAAGAAA+AGG - Chr2:10102492-10102511 None:intergenic 40.0%
TGTGCATCTAATCCAAGAAC+CGG - Chr2:10100447-10100466 None:intergenic 40.0%
TGTGTTGTGCTTCTGGTAAT+AGG + Chr2:10098720-10098739 MsG0280007064.01.T01:intron 40.0%
TGTTAATGCTTCCTGAGACT+TGG - Chr2:10099857-10099876 None:intergenic 40.0%
TTTACTGCCAACTATGCGTT+AGG - Chr2:10098543-10098562 None:intergenic 40.0%
! ACATCTCTGTGACCTTTTTG+GGG + Chr2:10097956-10097975 MsG0280007064.01.T01:intron 40.0%
! AGAGACTTTGAAAGGTGTAG+GGG - Chr2:10097724-10097743 None:intergenic 40.0%
! CACATCTCTGTGACCTTTTT+GGG + Chr2:10097955-10097974 MsG0280007064.01.T01:intron 40.0%
! CAGAGACTTTGAAAGGTGTA+GGG - Chr2:10097725-10097744 None:intergenic 40.0%
! GAAGTATCCATGGTGTATGT+TGG + Chr2:10097524-10097543 MsG0280007064.01.T01:CDS 40.0%
! TCACATCTCTGTGACCTTTT+TGG + Chr2:10097954-10097973 MsG0280007064.01.T01:intron 40.0%
! TCAGAGACTTTGAAAGGTGT+AGG - Chr2:10097726-10097745 None:intergenic 40.0%
! TCCACCTTTTCAGCAATGAT+GGG - Chr2:10100110-10100129 None:intergenic 40.0%
! TTCAAGATTTGAGAAGGCGT+TGG + Chr2:10103025-10103044 MsG0280007064.01.T01:CDS 40.0%
! TTCCACCTTTTCAGCAATGA+TGG - Chr2:10100111-10100130 None:intergenic 40.0%
! TTTGAGAGAAGCACACATCT+CGG + Chr2:10101180-10101199 MsG0280007064.01.T01:intron 40.0%
!! ATGGTTCTAAGGTAAGTCCT+TGG - Chr2:10100200-10100219 None:intergenic 40.0%
!! CACAAATACTGGTGATGGAT+AGG + Chr2:10099688-10099707 MsG0280007064.01.T01:intron 40.0%
!! CTTTTATATTTTGGGAGGGG+TGG + Chr2:10099603-10099622 MsG0280007064.01.T01:intron 40.0%
!! GTTTTGATGAGAGTGATAGC+TGG - Chr2:10102665-10102684 None:intergenic 40.0%
!! TATGTTACACTACCGGTTCT+TGG + Chr2:10100432-10100451 MsG0280007064.01.T01:intron 40.0%
!!! GGGTTTTGAAACTGAATGTG+AGG - Chr2:10102427-10102446 None:intergenic 40.0%
ACACCTAATCTATCATGGGC+AGG - Chr2:10099341-10099360 None:intergenic 45.0%
ACAGATGCCAACATACACCA+TGG - Chr2:10097534-10097553 None:intergenic 45.0%
ACAGTTCCAGATTTCATCCG+GGG - Chr2:10099107-10099126 None:intergenic 45.0%
ACCAAGCAGAACAACAACGA+TGG + Chr2:10102274-10102293 MsG0280007064.01.T01:intron 45.0%
ACTGCCTTCTCAAATACTGC+AGG - Chr2:10097353-10097372 None:intergenic 45.0%
AGTCCAAATCCGTATGGGAA+AGG + Chr2:10097443-10097462 MsG0280007064.01.T01:intron 45.0%
AGTTGGCAGTAAACCTTGTG+AGG + Chr2:10098550-10098569 MsG0280007064.01.T01:intron 45.0%
ATACGTGACATGAACCGCAA+TGG + Chr2:10100044-10100063 MsG0280007064.01.T01:intron 45.0%
ATGGTGTATGTTGGCATCTG+TGG + Chr2:10097533-10097552 MsG0280007064.01.T01:CDS 45.0%
CAAGGTTAGGACAAACAGCA+AGG - Chr2:10098747-10098766 None:intergenic 45.0%
CACAGTTCCAGATTTCATCC+GGG - Chr2:10099108-10099127 None:intergenic 45.0%
CGGTACTCACAAAAACGGAT+AGG + Chr2:10099738-10099757 MsG0280007064.01.T01:intron 45.0%
CTCTTCAAGCAGTTCTGTTG+AGG + Chr2:10098505-10098524 MsG0280007064.01.T01:intron 45.0%
CTGAGAGAGATGAGCTAACT+AGG - Chr2:10098441-10098460 None:intergenic 45.0%
CTTCCTTTCCCATACGGATT+TGG - Chr2:10097449-10097468 None:intergenic 45.0%
CTTGCTTGAAATAGGCTCAC+AGG + Chr2:10099264-10099283 MsG0280007064.01.T01:intron 45.0%
GAGAGTTTGGAAGCAGTTTC+TGG - Chr2:10102564-10102583 None:intergenic 45.0%
GATCGACACAGCAACAACAA+TGG + Chr2:10102306-10102325 MsG0280007064.01.T01:intron 45.0%
GATTGTGATCGCCAATCTCA+CGG - Chr2:10103541-10103560 None:intergenic 45.0%
GCACAGTTCCAGATTTCATC+CGG - Chr2:10099109-10099128 None:intergenic 45.0%
GCACGATATTCCTGAGGTAT+AGG + Chr2:10098784-10098803 MsG0280007064.01.T01:intron 45.0%
GCAGAGCTCATTTAGACTAC+AGG + Chr2:10098916-10098935 MsG0280007064.01.T01:intron 45.0%
GGAGGTAGTACTTATAGTGG+AGG + Chr2:10100290-10100309 MsG0280007064.01.T01:intron 45.0%
GTACCTAGATGAAACCTCGA+GGG - Chr2:10101721-10101740 None:intergenic 45.0%
TACCGAACATGTTATGCTGG+CGG - Chr2:10099723-10099742 None:intergenic 45.0%
TACTCTGCACGATATTCCTG+AGG + Chr2:10098778-10098797 MsG0280007064.01.T01:intron 45.0%
TAGAAGGGAAAACTCCAGCA+CGG - Chr2:10099201-10099220 None:intergenic 45.0%
TCCCATCATTGCTGAAAAGG+TGG + Chr2:10100106-10100125 MsG0280007064.01.T01:intron 45.0%
TCGTAACTGTGTTGTGCTTC+TGG + Chr2:10098713-10098732 MsG0280007064.01.T01:intron 45.0%
TCTAAATACACTCTCCCTCG+AGG + Chr2:10101704-10101723 MsG0280007064.01.T01:intron 45.0%
TGTACCTAGATGAAACCTCG+AGG - Chr2:10101722-10101741 None:intergenic 45.0%
TGTTTGTCCTAACCTTGCAC+TGG + Chr2:10098750-10098769 MsG0280007064.01.T01:intron 45.0%
TTGTAACCCCGGATGAAATC+TGG + Chr2:10099098-10099117 MsG0280007064.01.T01:intron 45.0%
! ACCATCGTTGTTGTTCTGCT+TGG - Chr2:10102278-10102297 None:intergenic 45.0%
! CATCTCTGTGACCTTTTTGG+GGG + Chr2:10097957-10097976 MsG0280007064.01.T01:intron 45.0%
! CGTTGTTGTTCTGCTTGGTT+GGG - Chr2:10102273-10102292 None:intergenic 45.0%
! GTCTTGTTGATAGAGCACCA+AGG - Chr2:10101755-10101774 None:intergenic 45.0%
! TCGTTGTTGTTCTGCTTGGT+TGG - Chr2:10102274-10102293 None:intergenic 45.0%
!! AAGATTTGAGAAGGCGTTGG+TGG + Chr2:10103028-10103047 MsG0280007064.01.T01:CDS 45.0%
!! GAGTACCGAACATGTTATGC+TGG - Chr2:10099726-10099745 None:intergenic 45.0%
!! GCAGTTTTTGAGAGATGCGA+TGG - Chr2:10102885-10102904 None:intergenic 45.0%
!! GCATGCTGCTATTTCCATTG+CGG - Chr2:10100061-10100080 None:intergenic 45.0%
!!! GTTGATCTAGTTTTCCGTGC+TGG + Chr2:10099184-10099203 MsG0280007064.01.T01:intron 45.0%
!! AATTAAGTATAATATTTAAT+GGG + Chr2:10101609-10101628 MsG0280007064.01.T01:intron 5.0%
ACACGACCATGGTCATCTAC+TGG + Chr2:10103588-10103607 MsG0280007064.01.T01:CDS 50.0%
ACCGAACATGTTATGCTGGC+GGG - Chr2:10099722-10099741 None:intergenic 50.0%
ATGGGCAGGAATTCAGAAGC+AGG - Chr2:10099327-10099346 None:intergenic 50.0%
CGTCGGGTACTCACAAATAC+TGG + Chr2:10099677-10099696 MsG0280007064.01.T01:intron 50.0%
CTATAGGGATGACGACACGT+CGG + Chr2:10099660-10099679 MsG0280007064.01.T01:intron 50.0%
GCAGGAATTCAGAAGCAGGA+TGG - Chr2:10099323-10099342 None:intergenic 50.0%
TAAACCTTGTGAGGATCCCG+TGG + Chr2:10098559-10098578 MsG0280007064.01.T01:intron 50.0%
TACGGCACCTGTAGTACAGA+TGG - Chr2:10099968-10099987 None:intergenic 50.0%
TATAGGGATGACGACACGTC+GGG + Chr2:10099661-10099680 MsG0280007064.01.T01:intron 50.0%
TCTCCCTCGAGGTTTCATCT+AGG + Chr2:10101715-10101734 MsG0280007064.01.T01:intron 50.0%
TCTTAGCATGCAGCGCGATA+AGG - Chr2:10097421-10097440 None:intergenic 50.0%
TGCTTCCTGAGACTTGGAAG+AGG - Chr2:10099851-10099870 None:intergenic 50.0%
! GGGTGTTTTGCAAGCACCAT+AGG - Chr2:10103285-10103304 None:intergenic 50.0%
!!! CAGGAACCCCATTTTGAAGC+AGG - Chr2:10102950-10102969 None:intergenic 50.0%
CAAACCACGGGATCCTCACA+AGG - Chr2:10098566-10098585 None:intergenic 55.0%
CCATCTGAGCCACAAACCAC+GGG - Chr2:10098578-10098597 None:intergenic 55.0%
CCCCGCCAGCATAACATGTT+CGG + Chr2:10099718-10099737 MsG0280007064.01.T01:intron 55.0%
CCGAACATGTTATGCTGGCG+GGG - Chr2:10099721-10099740 None:intergenic 55.0%
CGACGTGTCGTCATCCCTAT+AGG - Chr2:10099662-10099681 None:intergenic 55.0%
GCCATCTGAGCCACAAACCA+CGG - Chr2:10098579-10098598 None:intergenic 55.0%
TGTGAGGATCCCGTGGTTTG+TGG + Chr2:10098566-10098585 MsG0280007064.01.T01:intron 55.0%
! CCCGTGGTTTGTGGCTCAGA+TGG + Chr2:10098575-10098594 MsG0280007064.01.T01:intron 60.0%
GGGTCTCTGCGACACGACCA+TGG + Chr2:10103577-10103596 MsG0280007064.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 10097335 10103616 10097335 ID=MsG0280007064.01;Name=MsG0280007064.01
Chr2 mRNA 10097335 10103616 10097335 ID=MsG0280007064.01.T01;Parent=MsG0280007064.01;Name=MsG0280007064.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0|0|0.8|1|1|5|0|322
Chr2 exon 10097335 10097453 10097335 ID=MsG0280007064.01.T01:exon:2313;Parent=MsG0280007064.01.T01
Chr2 exon 10097518 10097737 10097518 ID=MsG0280007064.01.T01:exon:2314;Parent=MsG0280007064.01.T01
Chr2 exon 10100842 10100907 10100842 ID=MsG0280007064.01.T01:exon:2315;Parent=MsG0280007064.01.T01
Chr2 exon 10102936 10103164 10102936 ID=MsG0280007064.01.T01:exon:2316;Parent=MsG0280007064.01.T01
Chr2 exon 10103282 10103616 10103282 ID=MsG0280007064.01.T01:exon:2317;Parent=MsG0280007064.01.T01
Chr2 CDS 10097335 10097453 10097335 ID=MsG0280007064.01.T01:cds;Parent=MsG0280007064.01.T01
Chr2 CDS 10097518 10097737 10097518 ID=MsG0280007064.01.T01:cds;Parent=MsG0280007064.01.T01
Chr2 CDS 10100842 10100907 10100842 ID=MsG0280007064.01.T01:cds;Parent=MsG0280007064.01.T01
Chr2 CDS 10102936 10103164 10102936 ID=MsG0280007064.01.T01:cds;Parent=MsG0280007064.01.T01
Chr2 CDS 10103282 10103616 10103282 ID=MsG0280007064.01.T01:cds;Parent=MsG0280007064.01.T01
Gene Sequence

>MsG0280007064.01.T01

ATGCTCTCTAAGAAACCTGCAGTATTTGAGAAGGCAGTTTTGGAAGTAAAACAATTAGGATTCAATCCTAACAATACGTTTTTCCTTATCGCGCTGCATGCTAAGATTAGTCCAAATCCCATTTTGAAGTATCCATGGTGTATGTTGGCATCTGTGGAAAAAATTGAAGCAGTGATGCAGTTTTTTGTCAATCACATGGGTTGGGAGTCTAATGTGCTTGCCAAATATCCAATACTTCTTATGCTGAGTTTGGAAAAGGGTTATCCTAGGGCTTTTGCGTTGAAATTTCTTCAATCCAAAGGTTTGATTAAGGATGCTAAGTCCCCTACACCTTTCAAAATAAGGGATGAAGATGAACTTAGGGATGTGGAAGTTAAAGTTAGTAGTAAACGTGAGATGAATATGAATATTCAAATCCTGCTTCAAAATGGGGTTCCTGAGTCTAAAGTCCTTATTTTGTTTCGAAATTGGTATTCTATATTCGCTGAGAAGCCTTCAAGATTTGAGAAGGCGTTGGTGGAAGTAAATGAATTAGGATTTAACCCCAAAACAACTGTTTTCATTGTTGCACTGCGTGCTAAAATTAATAAAAAAATCCTTTGGGAAAGGAAGATTGATGTGTATAAGAAATGGGCCTATGGTGCTTGCAAAACACCCAATACTTCTTTGCTGAGTCTTGAGAAAAGGGTTATTCCTAGAGCTTTTGTCTTGAAATTTCTTGAGTCTAAAGGTTTGATTAAGGATGCTAAATTGGCTGGACCTTTCCAAATTTCTGAGTGTTTGTTTTTGAAGAAGTTTGTGTATTGCTTCGAGGAAGAAGCTTCTCAACTGTTGAAGTTGTACGAAGAGAAAAAAGATGTTTCCAATAGGATGTTGAAAAAGATTTTAAGCCGTGAGATTGGCGATCACAATCTGAGAAGTTACATCAAGGGTCTCTGCGACACGACCATGGTCATCTACTGGATTTGA

Protein sequence

>MsG0280007064.01.T01

MLSKKPAVFEKAVLEVKQLGFNPNNTFFLIALHAKISPNPILKYPWCMLASVEKIEAVMQFFVNHMGWESNVLAKYPILLMLSLEKGYPRAFALKFLQSKGLIKDAKSPTPFKIRDEDELRDVEVKVSSKREMNMNIQILLQNGVPESKVLILFRNWYSIFAEKPSRFEKALVEVNELGFNPKTTVFIVALRAKINKKILWERKIDVYKKWAYGACKTPNTSLLSLEKRVIPRAFVLKFLESKGLIKDAKLAGPFQISECLFLKKFVYCFEEEASQLLKLYEEKKDVSNRMLKKILSREIGDHNLRSYIKGLCDTTMVIYWI*