Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174590 | XP_003591474.1 | 94.953 | 317 | 4 | 3 | 1 | 317 | 1 | 305 | 0.0 | 613 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174590 | sp|P42736|RAP23_ARATH | 55.319 | 141 | 51 | 4 | 1 | 134 | 1 | 136 | 9.74e-43 | 150 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174590 | G7IEJ4 | 94.953 | 317 | 4 | 3 | 1 | 317 | 1 | 305 | 0.0 | 613 |
Gene ID | Type | Classification |
---|---|---|
Msa0174590 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006050 | Msa0174590 | -0.818893 | 1.545566e-52 | -8.615850e-47 |
Msa0025690 | Msa0174590 | -0.802943 | 4.413931e-49 | -8.615850e-47 |
Msa0034100 | Msa0174590 | -0.815793 | 7.707758e-52 | -8.615850e-47 |
Msa0040420 | Msa0174590 | -0.803793 | 2.942061e-49 | -8.615850e-47 |
Msa0044320 | Msa0174590 | -0.800186 | 1.621892e-48 | -8.615850e-47 |
Msa0046430 | Msa0174590 | 0.834695 | 2.582440e-56 | -8.615850e-47 |
Msa0059880 | Msa0174590 | 0.817129 | 3.870864e-52 | -8.615850e-47 |
Msa0074220 | Msa0174590 | -0.826972 | 2.023137e-54 | -8.615850e-47 |
Msa0081290 | Msa0174590 | -0.847739 | 9.558575e-60 | -8.615850e-47 |
Msa0090190 | Msa0174590 | 0.807297 | 5.413956e-50 | -8.615850e-47 |
Msa0128110 | Msa0174590 | -0.810583 | 1.072570e-50 | -8.615850e-47 |
Msa0128340 | Msa0174590 | 0.891175 | 5.046294e-74 | -8.615850e-47 |
Msa0128740 | Msa0174590 | 0.890536 | 9.013243e-74 | -8.615850e-47 |
Msa0131090 | Msa0174590 | -0.804985 | 1.660987e-49 | -8.615850e-47 |
Msa0132250 | Msa0174590 | 0.804950 | 1.688638e-49 | -8.615850e-47 |
Msa0137760 | Msa0174590 | 0.822639 | 2.126682e-53 | -8.615850e-47 |
Msa0140270 | Msa0174590 | 0.806681 | 7.309729e-50 | -8.615850e-47 |
Msa0143280 | Msa0174590 | -0.806764 | 7.020512e-50 | -8.615850e-47 |
Msa0150910 | Msa0174590 | 0.822672 | 2.089432e-53 | -8.615850e-47 |
Msa0163960 | Msa0174590 | -0.810633 | 1.045997e-50 | -8.615850e-47 |
Msa0174590 | Msa0177550 | 0.805023 | 1.630491e-49 | -8.615850e-47 |
Msa0174590 | Msa0182840 | 0.827039 | 1.949684e-54 | -8.615850e-47 |
Msa0174590 | Msa0189150 | -0.808271 | 3.361991e-50 | -8.615850e-47 |
Msa0174590 | Msa0190400 | -0.810992 | 8.748809e-51 | -8.615850e-47 |
Msa0174590 | Msa0190670 | 0.806452 | 8.169853e-50 | -8.615850e-47 |
Msa0174590 | Msa0194750 | -0.811147 | 8.095681e-51 | -8.615850e-47 |
Msa0174590 | Msa0196260 | 0.811662 | 6.258415e-51 | -8.615850e-47 |
Msa0174590 | Msa0224880 | 0.812595 | 3.917663e-51 | -8.615850e-47 |
Msa0174590 | Msa0225070 | -0.800837 | 1.194741e-48 | -8.615850e-47 |
Msa0174590 | Msa0238110 | 0.811536 | 6.665953e-51 | -8.615850e-47 |
Msa0174590 | Msa0238140 | 0.819169 | 1.337514e-52 | -8.615850e-47 |
Msa0174590 | Msa0271660 | 0.800498 | 1.400951e-48 | -8.615850e-47 |
Msa0174590 | Msa0274250 | 0.813464 | 2.526245e-51 | -8.615850e-47 |
Msa0174590 | Msa0275560 | 0.802979 | 4.337720e-49 | -8.615850e-47 |
Msa0174590 | Msa0275570 | 0.823870 | 1.097097e-53 | -8.615850e-47 |
Msa0174590 | Msa0278950 | 0.816514 | 5.318814e-52 | -8.615850e-47 |
Msa0174590 | Msa0290800 | 0.801366 | 9.316976e-49 | -8.615850e-47 |
Msa0174590 | Msa0311130 | -0.809208 | 2.119484e-50 | -8.615850e-47 |
Msa0174590 | Msa0315010 | -0.813551 | 2.416976e-51 | -8.615850e-47 |
Msa0174590 | Msa0317300 | 0.807034 | 6.156859e-50 | -8.615850e-47 |
Msa0174590 | Msa0328870 | 0.805680 | 1.187327e-49 | -8.615850e-47 |
Msa0174590 | Msa0349220 | -0.806940 | 6.444103e-50 | -8.615850e-47 |
Msa0174590 | Msa0349910 | 0.809550 | 1.790654e-50 | -8.615850e-47 |
Msa0174590 | Msa0375500 | 0.839884 | 1.212710e-57 | -8.615850e-47 |
Msa0174590 | Msa0384150 | -0.819637 | 1.046001e-52 | -8.615850e-47 |
Msa0174590 | Msa0424300 | 0.824776 | 6.720938e-54 | -8.615850e-47 |
Msa0174590 | Msa0434820 | -0.821448 | 4.017199e-53 | -8.615850e-47 |
Msa0174590 | Msa0447830 | -0.801888 | 7.280150e-49 | -8.615850e-47 |
Msa0174590 | Msa0452770 | 0.810296 | 1.237215e-50 | -8.615850e-47 |
Msa0174590 | Msa0471210 | 0.852700 | 3.885905e-61 | -8.615850e-47 |
Msa0174590 | Msa0472390 | 0.808819 | 2.567623e-50 | -8.615850e-47 |
Msa0174590 | Msa0478730 | -0.812032 | 5.199210e-51 | -8.615850e-47 |
Msa0174590 | Msa0515930 | 0.821297 | 4.351534e-53 | -8.615850e-47 |
Msa0174590 | Msa0522810 | -0.815719 | 8.005370e-52 | -8.615850e-47 |
Msa0174590 | Msa0529360 | 0.815588 | 8.558700e-52 | -8.615850e-47 |
Msa0174590 | Msa0533140 | -0.811105 | 8.268328e-51 | -8.615850e-47 |
Msa0174590 | Msa0538450 | 0.802127 | 6.501530e-49 | -8.615850e-47 |
Msa0174590 | Msa0538520 | 0.804388 | 2.212741e-49 | -8.615850e-47 |
Msa0174590 | Msa0538650 | 0.812392 | 4.338722e-51 | -8.615850e-47 |
Msa0174590 | Msa0569230 | -0.808987 | 2.363971e-50 | -8.615850e-47 |
Msa0174590 | Msa0569930 | -0.804063 | 2.585934e-49 | -8.615850e-47 |
Msa0174590 | Msa0575950 | 0.804972 | 1.671099e-49 | -8.615850e-47 |
Msa0174590 | Msa0580210 | 0.829267 | 5.663684e-55 | -8.615850e-47 |
Msa0174590 | Msa0594320 | 0.812578 | 3.950739e-51 | -8.615850e-47 |
Msa0174590 | Msa0624930 | 0.808231 | 3.429171e-50 | -8.615850e-47 |
Msa0174590 | Msa0631900 | 0.802984 | 4.327455e-49 | -8.615850e-47 |
Msa0174590 | Msa0660070 | -0.807144 | 5.832972e-50 | -8.615850e-47 |
Msa0174590 | Msa0668220 | 0.804726 | 1.880733e-49 | -8.615850e-47 |
Msa0174590 | Msa0670360 | 0.806484 | 8.045910e-50 | -8.615850e-47 |
Msa0174590 | Msa0671400 | 0.800157 | 1.644055e-48 | -8.615850e-47 |
Msa0174590 | Msa0698110 | 0.805250 | 1.461963e-49 | -8.615850e-47 |
Msa0174590 | Msa0705520 | 0.819224 | 1.299174e-52 | -8.615850e-47 |
Msa0174590 | Msa0705710 | -0.800345 | 1.505618e-48 | -8.615850e-47 |
Msa0174590 | Msa0706130 | -0.809026 | 2.319401e-50 | -8.615850e-47 |
Msa0174590 | Msa0735340 | 0.802715 | 4.919320e-49 | -8.615850e-47 |
Msa0174590 | Msa0756670 | -0.807221 | 5.618398e-50 | -8.615850e-47 |
Msa0174590 | Msa0758000 | 0.800175 | 1.630529e-48 | -8.615850e-47 |
Msa0174590 | Msa0787860 | 0.805239 | 1.469376e-49 | -8.615850e-47 |
Msa0174590 | Msa0797010 | -0.819416 | 1.174882e-52 | -8.615850e-47 |
Msa0174590 | Msa0797980 | -0.822645 | 2.120174e-53 | -8.615850e-47 |
Msa0174590 | Msa0813630 | -0.805464 | 1.318352e-49 | -8.615850e-47 |
Msa0174590 | Msa0826940 | -0.803096 | 4.102490e-49 | -8.615850e-47 |
Msa0174590 | Msa0836060 | -0.805764 | 1.140534e-49 | -8.615850e-47 |
Msa0174590 | Msa0868040 | -0.812495 | 4.118965e-51 | -8.615850e-47 |
Msa0174590 | Msa0898830 | -0.805605 | 1.231509e-49 | -8.615850e-47 |
Msa0174590 | Msa0932150 | 0.800105 | 1.684254e-48 | -8.615850e-47 |
Msa0174590 | Msa0967900 | -0.804538 | 2.058911e-49 | -8.615850e-47 |
Msa0174590 | Msa1006170 | 0.805735 | 1.156676e-49 | -8.615850e-47 |
Msa0174590 | Msa1024350 | 0.812293 | 4.560793e-51 | -8.615850e-47 |
Msa0174590 | Msa1031530 | -0.805325 | 1.409987e-49 | -8.615850e-47 |
Msa0174590 | Msa1036020 | 0.801559 | 8.502954e-49 | -8.615850e-47 |
Msa0174590 | Msa1041630 | 0.804640 | 1.960771e-49 | -8.615850e-47 |
Msa0174590 | Msa1044790 | -0.807572 | 4.734151e-50 | -8.615850e-47 |
Msa0174590 | Msa1061670 | 0.803555 | 3.297383e-49 | -8.615850e-47 |
Msa0174590 | Msa1063210 | 0.801066 | 1.073098e-48 | -8.615850e-47 |
Msa0174590 | Msa1072640 | -0.806180 | 9.322533e-50 | -8.615850e-47 |
Msa0174590 | Msa1076830 | 0.821724 | 3.467085e-53 | -8.615850e-47 |
Msa0174590 | Msa1078600 | -0.803377 | 3.588301e-49 | -8.615850e-47 |
Msa0174590 | Msa1085560 | 0.812530 | 4.047682e-51 | -8.615850e-47 |
Msa0174590 | Msa1087380 | 0.821245 | 4.473521e-53 | -8.615850e-47 |
Msa0174590 | Msa1093190 | -0.800917 | 1.151105e-48 | -8.615850e-47 |
Msa0174590 | Msa1109500 | -0.800130 | 1.664817e-48 | -8.615850e-47 |
Msa0174590 | Msa1109880 | 0.801267 | 9.759960e-49 | -8.615850e-47 |
Msa0174590 | Msa1109890 | 0.804721 | 1.885189e-49 | -8.615850e-47 |
Msa0174590 | Msa1116850 | -0.813833 | 2.094816e-51 | -8.615850e-47 |
Msa0174590 | Msa1125450 | -0.808208 | 3.467541e-50 | -8.615850e-47 |
Msa0174590 | Msa1145930 | -0.811104 | 8.270325e-51 | -8.615850e-47 |
Msa0174590 | Msa1157310 | -0.802580 | 5.244827e-49 | -8.615850e-47 |
Msa0174590 | Msa1164570 | -0.805553 | 1.262631e-49 | -8.615850e-47 |
Msa0174590 | Msa1166530 | 0.804367 | 2.234751e-49 | -8.615850e-47 |
Msa0174590 | Msa1182400 | -0.804461 | 2.136563e-49 | -8.615850e-47 |
Msa0174590 | Msa1199750 | -0.811020 | 8.625227e-51 | -8.615850e-47 |
Msa0174590 | Msa1214960 | 0.809224 | 2.102582e-50 | -8.615850e-47 |
Msa0174590 | Msa1286950 | -0.813745 | 2.190731e-51 | -8.615850e-47 |
Msa0174590 | Msa1296870 | 0.804064 | 2.584272e-49 | -8.615850e-47 |
Msa0174590 | Msa1297720 | -0.800888 | 1.166877e-48 | -8.615850e-47 |
Msa0174590 | Msa1319230 | -0.806501 | 7.979681e-50 | -8.615850e-47 |
Msa0174590 | Msa1328600 | -0.807598 | 4.673600e-50 | -8.615850e-47 |
Msa0174590 | Msa1343450 | -0.806649 | 7.423078e-50 | -8.615850e-47 |
Msa0174590 | Msa1345390 | 0.819299 | 1.249067e-52 | -8.615850e-47 |
Msa0174590 | Msa1357750 | 0.816257 | 6.070162e-52 | -8.615850e-47 |
Msa0174590 | Msa1357860 | 0.800866 | 1.178934e-48 | -8.615850e-47 |
Msa0174590 | Msa1363560 | -0.812418 | 4.281363e-51 | -8.615850e-47 |
Msa0174590 | Msa1371060 | -0.807272 | 5.481946e-50 | -8.615850e-47 |
Msa0174590 | Msa1373560 | 0.802539 | 5.347859e-49 | -8.615850e-47 |
Msa0174590 | Msa1376070 | 0.817635 | 2.977634e-52 | -8.615850e-47 |
Msa0174590 | Msa1378840 | -0.811066 | 8.431079e-51 | -8.615850e-47 |
Msa0174590 | Msa1412740 | -0.846869 | 1.655739e-59 | -8.615850e-47 |
Msa0174590 | Msa1429810 | 0.861013 | 1.381917e-63 | -8.615850e-47 |
Msa0174590 | Msa1434700 | 0.818457 | 1.940490e-52 | -8.615850e-47 |
Msa0174590 | Msa1456620 | -0.805347 | 1.395078e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174590 | MtrunA17_Chr1g0195151 | 94.953 | 317 | 4 | 3 | 1 | 317 | 1 | 305 | 0.0 | 613 |
Msa0174590 | MtrunA17_Chr2g0334031 | 35.000 | 380 | 161 | 16 | 1 | 317 | 1 | 357 | 3.43e-46 | 160 |
Msa0174590 | MtrunA17_Chr8g0344961 | 45.455 | 198 | 58 | 4 | 1 | 151 | 1 | 195 | 7.09e-44 | 154 |
Msa0174590 | MtrunA17_Chr2g0295421 | 46.584 | 161 | 51 | 3 | 1 | 134 | 1 | 153 | 3.44e-35 | 128 |
Msa0174590 | MtrunA17_Chr7g0221501 | 56.180 | 89 | 34 | 1 | 50 | 133 | 19 | 107 | 3.75e-28 | 107 |
Msa0174590 | MtrunA17_Chr7g0221471 | 64.198 | 81 | 19 | 2 | 56 | 133 | 34 | 107 | 5.83e-28 | 107 |
Msa0174590 | MtrunA17_Chr4g0044881 | 60.976 | 82 | 23 | 1 | 71 | 143 | 108 | 189 | 8.90e-28 | 108 |
Msa0174590 | MtrunA17_Chr4g0044871 | 45.763 | 118 | 47 | 2 | 77 | 183 | 96 | 207 | 1.34e-27 | 107 |
Msa0174590 | MtrunA17_Chr4g0044911 | 75.410 | 61 | 15 | 0 | 77 | 137 | 96 | 156 | 1.98e-27 | 107 |
Msa0174590 | MtrunA17_Chr4g0044901 | 75.410 | 61 | 15 | 0 | 77 | 137 | 96 | 156 | 4.60e-27 | 106 |
Msa0174590 | MtrunA17_Chr2g0316931 | 69.231 | 65 | 20 | 0 | 70 | 134 | 24 | 88 | 2.74e-25 | 100 |
Msa0174590 | MtrunA17_Chr8g0383591 | 70.968 | 62 | 18 | 0 | 72 | 133 | 140 | 201 | 8.56e-25 | 102 |
Msa0174590 | MtrunA17_Chr2g0283171 | 65.714 | 70 | 23 | 1 | 67 | 135 | 53 | 122 | 1.55e-24 | 97.4 |
Msa0174590 | MtrunA17_Chr2g0282651 | 65.672 | 67 | 23 | 0 | 77 | 143 | 70 | 136 | 2.56e-24 | 99.4 |
Msa0174590 | MtrunA17_Chr4g0026881 | 44.615 | 130 | 58 | 4 | 9 | 135 | 38 | 156 | 3.48e-24 | 98.6 |
Msa0174590 | MtrunA17_Chr3g0099871 | 68.254 | 63 | 20 | 0 | 77 | 139 | 27 | 89 | 8.95e-24 | 97.1 |
Msa0174590 | MtrunA17_Chr8g0375031 | 59.722 | 72 | 29 | 0 | 70 | 141 | 118 | 189 | 1.68e-23 | 96.3 |
Msa0174590 | MtrunA17_Chr5g0396911 | 55.682 | 88 | 33 | 2 | 77 | 160 | 112 | 197 | 3.96e-23 | 97.1 |
Msa0174590 | MtrunA17_Chr8g0335331 | 69.697 | 66 | 18 | 2 | 77 | 140 | 125 | 190 | 4.92e-23 | 94.4 |
Msa0174590 | MtrunA17_Chr2g0283181 | 62.338 | 77 | 28 | 1 | 60 | 135 | 132 | 208 | 5.01e-23 | 96.7 |
Msa0174590 | MtrunA17_Chr4g0046161 | 58.228 | 79 | 29 | 2 | 61 | 135 | 38 | 116 | 1.47e-22 | 90.9 |
Msa0174590 | MtrunA17_Chr1g0184081 | 71.667 | 60 | 16 | 1 | 77 | 135 | 21 | 80 | 1.49e-22 | 91.7 |
Msa0174590 | MtrunA17_Chr2g0282621 | 68.852 | 61 | 19 | 0 | 73 | 133 | 11 | 71 | 1.70e-22 | 92.4 |
Msa0174590 | MtrunA17_Chr7g0261101 | 68.750 | 64 | 19 | 1 | 73 | 135 | 16 | 79 | 2.89e-22 | 90.9 |
Msa0174590 | MtrunA17_Chr1g0186671 | 71.667 | 60 | 16 | 1 | 77 | 135 | 19 | 78 | 3.57e-22 | 90.5 |
Msa0174590 | MtrunA17_Chr7g0250711 | 52.427 | 103 | 39 | 4 | 34 | 134 | 24 | 118 | 5.18e-22 | 92.0 |
Msa0174590 | MtrunA17_Chr7g0250731 | 71.186 | 59 | 16 | 1 | 77 | 134 | 61 | 119 | 5.19e-22 | 92.0 |
Msa0174590 | MtrunA17_Chr8g0335321 | 69.492 | 59 | 17 | 1 | 77 | 134 | 96 | 154 | 5.83e-22 | 91.7 |
Msa0174590 | MtrunA17_Chr7g0261151 | 66.667 | 72 | 21 | 2 | 65 | 135 | 10 | 79 | 6.57e-22 | 89.7 |
Msa0174590 | MtrunA17_Chr3g0115631 | 69.492 | 59 | 18 | 0 | 76 | 134 | 149 | 207 | 7.04e-22 | 94.4 |
Msa0174590 | MtrunA17_Chr7g0250721 | 71.186 | 59 | 16 | 1 | 77 | 134 | 61 | 119 | 7.75e-22 | 91.7 |
Msa0174590 | MtrunA17_Chr5g0425561 | 63.492 | 63 | 23 | 0 | 76 | 138 | 172 | 234 | 8.44e-22 | 94.4 |
Msa0174590 | MtrunA17_Chr8g0335311 | 66.129 | 62 | 20 | 1 | 77 | 137 | 96 | 157 | 1.01e-21 | 90.9 |
Msa0174590 | MtrunA17_Chr5g0438831 | 56.410 | 78 | 34 | 0 | 77 | 154 | 46 | 123 | 1.04e-21 | 92.8 |
Msa0174590 | MtrunA17_Chr8g0387801 | 56.627 | 83 | 32 | 2 | 50 | 132 | 84 | 162 | 1.06e-21 | 93.2 |
Msa0174590 | MtrunA17_Chr1g0186731 | 68.333 | 60 | 18 | 1 | 77 | 135 | 21 | 80 | 1.22e-21 | 89.0 |
Msa0174590 | MtrunA17_Chr2g0297331 | 65.672 | 67 | 19 | 2 | 77 | 142 | 14 | 77 | 1.37e-21 | 88.6 |
Msa0174590 | MtrunA17_Chr4g0055801 | 60.256 | 78 | 29 | 2 | 59 | 135 | 137 | 213 | 1.45e-21 | 92.8 |
Msa0174590 | MtrunA17_Chr4g0055781 | 51.613 | 93 | 43 | 2 | 59 | 150 | 85 | 176 | 1.59e-21 | 91.7 |
Msa0174590 | MtrunA17_Chr2g0324131 | 67.797 | 59 | 19 | 0 | 76 | 134 | 217 | 275 | 1.63e-21 | 94.4 |
Msa0174590 | MtrunA17_Chr1g0170531 | 72.414 | 58 | 15 | 1 | 77 | 133 | 89 | 146 | 3.04e-21 | 90.5 |
Msa0174590 | MtrunA17_Chr1g0158971 | 71.429 | 56 | 16 | 0 | 77 | 132 | 115 | 170 | 3.65e-21 | 92.4 |
Msa0174590 | MtrunA17_Chr4g0055761 | 70.690 | 58 | 16 | 1 | 77 | 133 | 145 | 202 | 3.67e-21 | 90.9 |
Msa0174590 | MtrunA17_Chr3g0126321 | 69.643 | 56 | 17 | 0 | 77 | 132 | 113 | 168 | 7.47e-21 | 91.7 |
Msa0174590 | MtrunA17_Chr1g0196781 | 59.420 | 69 | 27 | 1 | 67 | 134 | 141 | 209 | 1.46e-20 | 90.1 |
Msa0174590 | MtrunA17_Chr5g0437671 | 57.971 | 69 | 29 | 0 | 74 | 142 | 82 | 150 | 1.66e-20 | 91.3 |
Msa0174590 | MtrunA17_Chr8g0382491 | 64.407 | 59 | 21 | 0 | 76 | 134 | 112 | 170 | 1.72e-20 | 89.4 |
Msa0174590 | MtrunA17_Chr2g0323171 | 62.069 | 58 | 22 | 0 | 77 | 134 | 65 | 122 | 2.79e-20 | 86.7 |
Msa0174590 | MtrunA17_Chr4g0002631 | 63.158 | 57 | 21 | 0 | 77 | 133 | 8 | 64 | 3.43e-20 | 86.7 |
Msa0174590 | MtrunA17_Chr5g0438801 | 68.421 | 57 | 18 | 0 | 77 | 133 | 51 | 107 | 3.46e-20 | 88.6 |
Msa0174590 | MtrunA17_Chr4g0026931 | 62.121 | 66 | 24 | 1 | 69 | 133 | 123 | 188 | 3.61e-20 | 88.6 |
Msa0174590 | MtrunA17_Chr1g0184031 | 48.837 | 86 | 43 | 1 | 48 | 132 | 55 | 140 | 4.02e-20 | 87.0 |
Msa0174590 | MtrunA17_Chr1g0196871 | 65.079 | 63 | 21 | 1 | 77 | 138 | 16 | 78 | 4.23e-20 | 83.6 |
Msa0174590 | MtrunA17_Chr5g0412641 | 46.875 | 96 | 37 | 1 | 51 | 132 | 6 | 101 | 7.59e-20 | 89.0 |
Msa0174590 | MtrunA17_Chr1g0186681 | 68.852 | 61 | 17 | 2 | 77 | 135 | 19 | 79 | 1.16e-19 | 83.6 |
Msa0174590 | MtrunA17_Chr5g0432821 | 46.739 | 92 | 46 | 1 | 64 | 152 | 108 | 199 | 1.30e-19 | 87.0 |
Msa0174590 | MtrunA17_Chr4g0023411 | 62.069 | 58 | 22 | 0 | 77 | 134 | 65 | 122 | 1.70e-19 | 84.7 |
Msa0174590 | MtrunA17_Chr7g0257911 | 62.069 | 58 | 22 | 0 | 77 | 134 | 31 | 88 | 1.73e-19 | 86.7 |
Msa0174590 | MtrunA17_Chr3g0137174 | 61.404 | 57 | 22 | 0 | 77 | 133 | 8 | 64 | 1.80e-19 | 84.7 |
Msa0174590 | MtrunA17_Chr2g0331231 | 45.455 | 88 | 44 | 1 | 50 | 133 | 10 | 97 | 1.86e-19 | 85.1 |
Msa0174590 | MtrunA17_Chr6g0486701 | 60.345 | 58 | 23 | 0 | 76 | 133 | 43 | 100 | 1.87e-19 | 85.1 |
Msa0174590 | MtrunA17_Chr8g0367911 | 55.882 | 68 | 28 | 1 | 77 | 142 | 44 | 111 | 2.38e-19 | 86.3 |
Msa0174590 | MtrunA17_Chr1g0189941 | 57.143 | 56 | 24 | 0 | 77 | 132 | 24 | 79 | 2.94e-19 | 83.2 |
Msa0174590 | MtrunA17_Chr3g0131601 | 58.025 | 81 | 28 | 1 | 53 | 133 | 58 | 132 | 3.27e-19 | 85.5 |
Msa0174590 | MtrunA17_Chr8g0390091 | 51.316 | 76 | 36 | 1 | 58 | 133 | 19 | 93 | 4.16e-19 | 84.7 |
Msa0174590 | MtrunA17_Chr7g0275841 | 48.611 | 72 | 37 | 0 | 73 | 144 | 24 | 95 | 4.46e-19 | 83.2 |
Msa0174590 | MtrunA17_Chr7g0232261 | 62.069 | 58 | 22 | 0 | 77 | 134 | 61 | 118 | 5.41e-19 | 84.3 |
Msa0174590 | MtrunA17_Chr1g0184011 | 41.176 | 119 | 62 | 2 | 22 | 132 | 22 | 140 | 7.58e-19 | 83.6 |
Msa0174590 | MtrunA17_Chr4g0062551 | 54.839 | 62 | 28 | 0 | 77 | 138 | 53 | 114 | 7.87e-19 | 81.6 |
Msa0174590 | MtrunA17_Chr5g0399441 | 58.621 | 58 | 24 | 0 | 76 | 133 | 27 | 84 | 1.00e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr4g0003421 | 60.656 | 61 | 24 | 0 | 77 | 137 | 40 | 100 | 1.03e-18 | 84.0 |
Msa0174590 | MtrunA17_Chr7g0252381 | 64.286 | 56 | 20 | 0 | 77 | 132 | 42 | 97 | 1.40e-18 | 84.0 |
Msa0174590 | MtrunA17_Chr6g0461271 | 48.101 | 79 | 41 | 0 | 54 | 132 | 10 | 88 | 1.46e-18 | 84.7 |
Msa0174590 | MtrunA17_Chr7g0265851 | 50.000 | 72 | 36 | 0 | 73 | 144 | 20 | 91 | 1.52e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr8g0340311 | 60.345 | 58 | 23 | 0 | 77 | 134 | 47 | 104 | 1.55e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr8g0378811 | 53.521 | 71 | 32 | 1 | 62 | 132 | 41 | 110 | 1.61e-18 | 83.6 |
Msa0174590 | MtrunA17_Chr5g0437371 | 62.500 | 56 | 21 | 0 | 77 | 132 | 66 | 121 | 1.76e-18 | 84.7 |
Msa0174590 | MtrunA17_Chr4g0063751 | 63.158 | 57 | 21 | 0 | 77 | 133 | 7 | 63 | 2.03e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr4g0062161 | 54.839 | 62 | 28 | 0 | 77 | 138 | 53 | 114 | 2.28e-18 | 82.0 |
Msa0174590 | MtrunA17_Chr3g0083501 | 68.000 | 50 | 16 | 0 | 84 | 133 | 2 | 51 | 2.28e-18 | 78.2 |
Msa0174590 | MtrunA17_Chr1g0183961 | 73.333 | 60 | 15 | 1 | 77 | 135 | 27 | 86 | 3.18e-18 | 80.1 |
Msa0174590 | MtrunA17_Chr3g0134161 | 52.500 | 80 | 35 | 1 | 62 | 138 | 30 | 109 | 4.40e-18 | 80.5 |
Msa0174590 | MtrunA17_Chr3g0140161 | 58.621 | 58 | 24 | 0 | 76 | 133 | 42 | 99 | 5.05e-18 | 80.5 |
Msa0174590 | MtrunA17_Chr4g0055951 | 58.730 | 63 | 24 | 1 | 73 | 133 | 68 | 130 | 5.13e-18 | 82.0 |
Msa0174590 | MtrunA17_Chr7g0261181 | 67.164 | 67 | 21 | 1 | 77 | 142 | 13 | 79 | 5.72e-18 | 79.0 |
Msa0174590 | MtrunA17_Chr7g0217991 | 52.055 | 73 | 33 | 1 | 62 | 132 | 25 | 97 | 6.23e-18 | 84.0 |
Msa0174590 | MtrunA17_Chr8g0350701 | 55.385 | 65 | 27 | 1 | 70 | 132 | 18 | 82 | 7.54e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr2g0286161 | 37.013 | 154 | 74 | 6 | 77 | 213 | 50 | 197 | 7.98e-18 | 82.4 |
Msa0174590 | MtrunA17_Chr2g0301191 | 47.368 | 76 | 39 | 1 | 61 | 135 | 2 | 77 | 8.05e-18 | 80.5 |
Msa0174590 | MtrunA17_Chr4g0066931 | 41.905 | 105 | 57 | 2 | 34 | 136 | 10 | 112 | 8.23e-18 | 82.8 |
Msa0174590 | MtrunA17_Chr2g0333011 | 61.404 | 57 | 22 | 0 | 77 | 133 | 7 | 63 | 1.02e-17 | 79.3 |
Msa0174590 | MtrunA17_Chr3g0129421 | 63.750 | 80 | 19 | 2 | 74 | 153 | 167 | 236 | 1.31e-17 | 82.4 |
Msa0174590 | MtrunA17_Chr8g0346741 | 46.914 | 81 | 35 | 2 | 73 | 153 | 35 | 107 | 1.58e-17 | 79.0 |
Msa0174590 | MtrunA17_Chr1g0184071 | 38.667 | 150 | 74 | 7 | 40 | 185 | 39 | 174 | 2.02e-17 | 78.6 |
Msa0174590 | MtrunA17_Chr1g0183981 | 63.158 | 57 | 20 | 1 | 77 | 132 | 75 | 131 | 3.47e-17 | 79.0 |
Msa0174590 | MtrunA17_Chr1g0150661 | 50.000 | 68 | 30 | 1 | 67 | 134 | 29 | 92 | 3.71e-17 | 79.0 |
Msa0174590 | MtrunA17_Chr7g0253424 | 56.897 | 58 | 25 | 0 | 75 | 132 | 37 | 94 | 4.55e-17 | 79.7 |
Msa0174590 | MtrunA17_Chr1g0170471 | 46.154 | 104 | 48 | 3 | 40 | 135 | 39 | 142 | 5.31e-17 | 77.4 |
Msa0174590 | MtrunA17_Chr1g0203861 | 39.252 | 107 | 63 | 1 | 38 | 144 | 7 | 111 | 5.78e-17 | 78.2 |
Msa0174590 | MtrunA17_Chr6g0453661 | 58.929 | 56 | 23 | 0 | 77 | 132 | 38 | 93 | 7.15e-17 | 80.5 |
Msa0174590 | MtrunA17_Chr6g0473971 | 37.815 | 119 | 69 | 2 | 27 | 144 | 7 | 121 | 8.15e-17 | 78.6 |
Msa0174590 | MtrunA17_Chr4g0042761 | 53.125 | 64 | 29 | 1 | 69 | 132 | 41 | 103 | 1.12e-16 | 79.3 |
Msa0174590 | MtrunA17_Chr1g0150671 | 52.542 | 59 | 28 | 0 | 76 | 134 | 45 | 103 | 1.31e-16 | 78.6 |
Msa0174590 | MtrunA17_Chr7g0261201 | 61.765 | 68 | 25 | 1 | 69 | 135 | 90 | 157 | 1.32e-16 | 77.8 |
Msa0174590 | MtrunA17_Chr1g0150691 | 52.542 | 59 | 28 | 0 | 76 | 134 | 21 | 79 | 1.36e-16 | 77.4 |
Msa0174590 | MtrunA17_Chr2g0301171 | 46.269 | 67 | 36 | 0 | 69 | 135 | 11 | 77 | 1.47e-16 | 77.0 |
Msa0174590 | MtrunA17_Chr8g0334801 | 57.895 | 57 | 24 | 0 | 77 | 133 | 52 | 108 | 1.48e-16 | 77.0 |
Msa0174590 | MtrunA17_Chr1g0184061 | 48.837 | 86 | 39 | 2 | 51 | 135 | 55 | 136 | 1.50e-16 | 77.4 |
Msa0174590 | MtrunA17_Chr6g0473741 | 46.154 | 78 | 42 | 0 | 67 | 144 | 56 | 133 | 1.54e-16 | 77.4 |
Msa0174590 | MtrunA17_Chr8g0345531 | 55.738 | 61 | 26 | 1 | 60 | 119 | 98 | 158 | 1.89e-16 | 79.0 |
Msa0174590 | MtrunA17_Chr1g0150631 | 43.023 | 86 | 46 | 2 | 51 | 134 | 11 | 95 | 1.91e-16 | 77.0 |
Msa0174590 | MtrunA17_Chr1g0200931 | 52.941 | 68 | 29 | 2 | 68 | 132 | 12 | 79 | 2.07e-16 | 74.7 |
Msa0174590 | MtrunA17_Chr6g0461941 | 70.968 | 62 | 18 | 0 | 72 | 133 | 15 | 76 | 2.30e-16 | 76.6 |
Msa0174590 | MtrunA17_Chr1g0153151 | 57.895 | 57 | 24 | 0 | 77 | 133 | 44 | 100 | 3.58e-16 | 75.1 |
Msa0174590 | MtrunA17_Chr6g0473941 | 47.561 | 82 | 41 | 1 | 53 | 134 | 11 | 90 | 4.92e-16 | 75.5 |
Msa0174590 | MtrunA17_Chr6g0473881 | 46.154 | 78 | 42 | 0 | 67 | 144 | 100 | 177 | 5.65e-16 | 77.0 |
Msa0174590 | MtrunA17_Chr1g0167781 | 56.000 | 75 | 32 | 1 | 62 | 135 | 67 | 141 | 6.07e-16 | 75.5 |
Msa0174590 | MtrunA17_Chr6g0473931 | 44.565 | 92 | 49 | 1 | 53 | 144 | 11 | 100 | 6.52e-16 | 75.1 |
Msa0174590 | MtrunA17_Chr4g0057241 | 47.619 | 84 | 39 | 2 | 72 | 155 | 10 | 88 | 7.95e-16 | 73.9 |
Msa0174590 | MtrunA17_Chr6g0473961 | 44.565 | 92 | 49 | 1 | 53 | 144 | 32 | 121 | 1.48e-15 | 74.3 |
Msa0174590 | MtrunA17_Chr5g0401871 | 56.140 | 57 | 25 | 0 | 77 | 133 | 25 | 81 | 1.72e-15 | 73.6 |
Msa0174590 | MtrunA17_Chr4g0017851 | 34.000 | 100 | 62 | 1 | 36 | 135 | 81 | 176 | 2.13e-15 | 75.5 |
Msa0174590 | MtrunA17_Chr2g0301181 | 44.286 | 70 | 39 | 0 | 69 | 138 | 11 | 80 | 2.26e-15 | 74.3 |
Msa0174590 | MtrunA17_Chr7g0261171 | 54.023 | 87 | 34 | 4 | 50 | 132 | 57 | 141 | 2.34e-15 | 74.3 |
Msa0174590 | MtrunA17_Chr1g0155751 | 63.158 | 57 | 21 | 0 | 77 | 133 | 39 | 95 | 2.48e-15 | 74.7 |
Msa0174590 | MtrunA17_Chr6g0473781 | 48.529 | 68 | 35 | 0 | 67 | 134 | 47 | 114 | 2.96e-15 | 73.9 |
Msa0174590 | MtrunA17_Chr1g0205961 | 55.556 | 54 | 24 | 0 | 70 | 123 | 108 | 161 | 3.31e-15 | 75.5 |
Msa0174590 | MtrunA17_Chr1g0146191 | 53.165 | 79 | 33 | 1 | 63 | 137 | 29 | 107 | 4.56e-15 | 73.9 |
Msa0174590 | MtrunA17_Chr1g0183931 | 67.241 | 58 | 18 | 1 | 77 | 133 | 101 | 158 | 5.35e-15 | 73.6 |
Msa0174590 | MtrunA17_Chr7g0243431 | 53.968 | 63 | 22 | 1 | 77 | 132 | 78 | 140 | 6.38e-15 | 75.1 |
Msa0174590 | MtrunA17_Chr6g0473981 | 41.000 | 100 | 58 | 1 | 46 | 144 | 22 | 121 | 6.50e-15 | 73.2 |
Msa0174590 | MtrunA17_Chr8g0345551 | 56.364 | 55 | 22 | 1 | 70 | 124 | 110 | 162 | 8.76e-15 | 74.3 |
Msa0174590 | MtrunA17_Chr1g0209891 | 41.667 | 84 | 45 | 1 | 70 | 149 | 47 | 130 | 1.12e-14 | 73.2 |
Msa0174590 | MtrunA17_Chr3g0136551 | 40.506 | 79 | 47 | 0 | 77 | 155 | 65 | 143 | 1.55e-14 | 72.4 |
Msa0174590 | MtrunA17_Chr6g0486711 | 52.632 | 76 | 32 | 1 | 76 | 151 | 48 | 119 | 1.72e-14 | 71.6 |
Msa0174590 | MtrunA17_Chr6g0474001 | 40.541 | 111 | 60 | 2 | 34 | 144 | 17 | 121 | 2.42e-14 | 72.0 |
Msa0174590 | MtrunA17_Chr1g0186741 | 65.000 | 60 | 20 | 1 | 77 | 135 | 73 | 132 | 2.54e-14 | 70.9 |
Msa0174590 | MtrunA17_Chr3g0108241 | 49.398 | 83 | 37 | 2 | 58 | 135 | 92 | 174 | 3.22e-14 | 71.2 |
Msa0174590 | MtrunA17_Chr6g0473861 | 45.946 | 74 | 40 | 0 | 71 | 144 | 57 | 130 | 3.68e-14 | 71.6 |
Msa0174590 | MtrunA17_Chr6g0473771 | 37.963 | 108 | 65 | 1 | 37 | 144 | 5 | 110 | 5.24e-14 | 67.4 |
Msa0174590 | MtrunA17_Chr3g0136541 | 40.260 | 77 | 46 | 0 | 79 | 155 | 42 | 118 | 1.60e-13 | 68.9 |
Msa0174590 | MtrunA17_Chr5g0396741 | 63.077 | 65 | 24 | 0 | 73 | 137 | 113 | 177 | 1.60e-13 | 70.1 |
Msa0174590 | MtrunA17_Chr1g0149331 | 60.656 | 61 | 24 | 0 | 73 | 133 | 3 | 63 | 1.76e-13 | 68.2 |
Msa0174590 | MtrunA17_Chr5g0423811 | 60.000 | 50 | 20 | 0 | 67 | 116 | 78 | 127 | 2.70e-13 | 69.3 |
Msa0174590 | MtrunA17_Chr4g0002771 | 56.627 | 83 | 30 | 2 | 50 | 132 | 56 | 132 | 7.50e-13 | 66.6 |
Msa0174590 | MtrunA17_Chr3g0142081 | 61.404 | 57 | 22 | 0 | 77 | 133 | 39 | 95 | 8.59e-13 | 66.6 |
Msa0174590 | MtrunA17_Chr5g0396191 | 56.140 | 57 | 25 | 0 | 77 | 133 | 11 | 67 | 1.52e-12 | 65.5 |
Msa0174590 | MtrunA17_Chr6g0464581 | 74.000 | 50 | 13 | 0 | 84 | 133 | 187 | 236 | 2.23e-12 | 67.4 |
Msa0174590 | MtrunA17_Chr5g0396171 | 44.643 | 56 | 31 | 0 | 79 | 134 | 26 | 81 | 2.26e-12 | 62.4 |
Msa0174590 | MtrunA17_Chr1g0186711 | 58.333 | 60 | 24 | 1 | 77 | 135 | 17 | 76 | 2.77e-12 | 62.8 |
Msa0174590 | MtrunA17_Chr7g0225131 | 49.153 | 59 | 27 | 1 | 76 | 134 | 28 | 83 | 2.83e-12 | 62.0 |
Msa0174590 | MtrunA17_Chr1g0201671 | 54.795 | 73 | 33 | 0 | 84 | 156 | 146 | 218 | 2.88e-12 | 66.6 |
Msa0174590 | MtrunA17_Chr1g0186721 | 52.000 | 75 | 34 | 2 | 77 | 150 | 17 | 90 | 3.66e-12 | 62.4 |
Msa0174590 | MtrunA17_Chr5g0438841 | 52.632 | 57 | 27 | 0 | 77 | 133 | 16 | 72 | 4.27e-12 | 63.5 |
Msa0174590 | MtrunA17_Chr5g0398091 | 35.398 | 113 | 63 | 3 | 27 | 132 | 6 | 115 | 6.69e-12 | 64.3 |
Msa0174590 | MtrunA17_Chr3g0137831 | 58.065 | 62 | 26 | 0 | 72 | 133 | 3 | 64 | 9.06e-12 | 63.5 |
Msa0174590 | MtrunA17_Chr1g0203831 | 52.941 | 68 | 31 | 1 | 77 | 144 | 57 | 123 | 1.47e-11 | 62.8 |
Msa0174590 | MtrunA17_Chr6g0473791 | 46.667 | 60 | 32 | 0 | 66 | 125 | 46 | 105 | 2.62e-11 | 60.8 |
Msa0174590 | MtrunA17_Chr5g0398081 | 40.506 | 79 | 41 | 1 | 69 | 141 | 41 | 119 | 4.25e-11 | 62.0 |
Msa0174590 | MtrunA17_Chr5g0398061 | 41.892 | 74 | 37 | 1 | 67 | 134 | 39 | 112 | 4.79e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0174590 | AT3G16770.1 | 55.319 | 141 | 51 | 4 | 1 | 134 | 1 | 136 | 9.90e-44 | 150 |
Msa0174590 | AT2G47520.1 | 55.224 | 134 | 33 | 3 | 1 | 134 | 1 | 107 | 3.63e-39 | 136 |
Msa0174590 | AT1G72360.3 | 51.111 | 135 | 63 | 2 | 1 | 135 | 1 | 132 | 2.85e-35 | 129 |
Msa0174590 | AT1G72360.2 | 50.365 | 137 | 63 | 3 | 1 | 135 | 1 | 134 | 3.77e-35 | 128 |
Msa0174590 | AT1G72360.1 | 78.788 | 66 | 14 | 0 | 70 | 135 | 18 | 83 | 2.35e-31 | 117 |
Msa0174590 | AT5G61890.1 | 50.467 | 107 | 52 | 1 | 73 | 179 | 86 | 191 | 1.88e-28 | 110 |
Msa0174590 | AT1G53910.3 | 46.154 | 182 | 52 | 5 | 1 | 136 | 1 | 182 | 1.87e-26 | 107 |
Msa0174590 | AT1G53910.1 | 45.652 | 184 | 52 | 5 | 1 | 136 | 1 | 184 | 3.56e-26 | 106 |
Msa0174590 | AT1G53910.2 | 45.652 | 184 | 52 | 5 | 1 | 136 | 1 | 184 | 3.56e-26 | 106 |
Msa0174590 | AT5G13330.1 | 73.770 | 61 | 16 | 0 | 73 | 133 | 35 | 95 | 4.73e-26 | 103 |
Msa0174590 | AT2G33710.1 | 50.420 | 119 | 51 | 3 | 16 | 133 | 15 | 126 | 5.01e-26 | 103 |
Msa0174590 | AT2G33710.2 | 75.410 | 61 | 15 | 0 | 73 | 133 | 66 | 126 | 6.68e-26 | 103 |
Msa0174590 | AT4G17490.1 | 56.566 | 99 | 39 | 2 | 49 | 143 | 106 | 204 | 3.90e-25 | 102 |
Msa0174590 | AT5G47230.1 | 45.865 | 133 | 47 | 5 | 26 | 135 | 85 | 215 | 2.17e-24 | 100 |
Msa0174590 | AT3G15210.1 | 74.138 | 58 | 15 | 0 | 77 | 134 | 25 | 82 | 3.36e-24 | 98.6 |
Msa0174590 | AT1G22190.1 | 46.154 | 130 | 52 | 5 | 12 | 139 | 34 | 147 | 3.81e-24 | 99.4 |
Msa0174590 | AT5G44210.1 | 60.000 | 75 | 29 | 1 | 69 | 142 | 24 | 98 | 4.02e-24 | 97.8 |
Msa0174590 | AT2G22200.1 | 52.381 | 84 | 40 | 0 | 51 | 134 | 45 | 128 | 5.97e-24 | 99.0 |
Msa0174590 | AT5G51190.1 | 75.000 | 60 | 14 | 1 | 77 | 135 | 72 | 131 | 6.23e-24 | 97.8 |
Msa0174590 | AT3G14230.3 | 39.130 | 230 | 124 | 6 | 63 | 285 | 109 | 329 | 2.89e-23 | 99.0 |
Msa0174590 | AT3G14230.2 | 39.130 | 230 | 124 | 6 | 63 | 285 | 110 | 330 | 3.20e-23 | 99.0 |
Msa0174590 | AT3G14230.1 | 39.130 | 230 | 124 | 6 | 63 | 285 | 114 | 334 | 3.37e-23 | 99.0 |
Msa0174590 | AT1G28370.2 | 73.684 | 57 | 15 | 0 | 77 | 133 | 58 | 114 | 7.75e-23 | 94.4 |
Msa0174590 | AT1G28370.1 | 67.164 | 67 | 18 | 1 | 77 | 143 | 20 | 82 | 1.28e-22 | 92.8 |
Msa0174590 | AT1G03800.1 | 56.790 | 81 | 34 | 1 | 70 | 150 | 46 | 125 | 2.81e-22 | 94.0 |
Msa0174590 | AT1G78080.1 | 71.186 | 59 | 17 | 0 | 76 | 134 | 151 | 209 | 2.81e-22 | 95.5 |
Msa0174590 | AT1G50640.1 | 71.930 | 57 | 16 | 0 | 77 | 133 | 28 | 84 | 2.82e-22 | 93.6 |
Msa0174590 | AT1G28360.1 | 67.742 | 62 | 20 | 0 | 73 | 134 | 8 | 69 | 3.03e-22 | 92.4 |
Msa0174590 | AT1G36060.1 | 57.692 | 78 | 28 | 1 | 56 | 133 | 127 | 199 | 3.28e-22 | 95.1 |
Msa0174590 | AT5G43410.1 | 71.667 | 60 | 16 | 1 | 77 | 135 | 15 | 74 | 3.39e-22 | 90.5 |
Msa0174590 | AT4G11140.1 | 70.175 | 57 | 17 | 0 | 77 | 133 | 87 | 143 | 3.60e-22 | 94.7 |
Msa0174590 | AT2G20880.1 | 70.690 | 58 | 17 | 0 | 76 | 133 | 186 | 243 | 4.21e-22 | 95.1 |
Msa0174590 | AT4G39780.1 | 47.273 | 110 | 43 | 4 | 38 | 133 | 41 | 149 | 4.92e-22 | 94.0 |
Msa0174590 | AT4G28140.1 | 68.966 | 58 | 18 | 0 | 76 | 133 | 142 | 199 | 5.67e-22 | 94.0 |
Msa0174590 | AT3G23230.1 | 61.972 | 71 | 22 | 2 | 77 | 142 | 20 | 90 | 5.79e-22 | 90.1 |
Msa0174590 | AT5G65130.2 | 61.429 | 70 | 22 | 1 | 65 | 134 | 106 | 170 | 7.89e-22 | 93.6 |
Msa0174590 | AT5G65130.1 | 61.429 | 70 | 22 | 1 | 65 | 134 | 104 | 168 | 7.95e-22 | 93.6 |
Msa0174590 | AT5G61600.1 | 47.423 | 97 | 45 | 2 | 43 | 133 | 49 | 145 | 8.72e-22 | 92.4 |
Msa0174590 | AT3G20310.1 | 70.175 | 57 | 17 | 0 | 77 | 133 | 27 | 83 | 9.15e-22 | 92.4 |
Msa0174590 | AT2G44840.1 | 63.077 | 65 | 23 | 1 | 71 | 134 | 86 | 150 | 2.17e-21 | 91.3 |
Msa0174590 | AT4G27950.1 | 58.904 | 73 | 29 | 1 | 61 | 132 | 101 | 173 | 4.08e-21 | 92.4 |
Msa0174590 | AT4G23750.2 | 69.643 | 56 | 17 | 0 | 77 | 132 | 122 | 177 | 6.34e-21 | 92.0 |
Msa0174590 | AT4G23750.1 | 69.643 | 56 | 17 | 0 | 77 | 132 | 122 | 177 | 6.34e-21 | 92.0 |
Msa0174590 | AT5G47220.1 | 43.443 | 122 | 55 | 3 | 35 | 155 | 78 | 186 | 6.83e-21 | 90.1 |
Msa0174590 | AT4G17500.1 | 70.690 | 58 | 16 | 1 | 77 | 133 | 148 | 205 | 7.36e-21 | 90.5 |
Msa0174590 | AT1G43160.1 | 55.556 | 90 | 40 | 0 | 61 | 150 | 45 | 134 | 9.10e-21 | 88.6 |
Msa0174590 | AT5G07580.1 | 51.685 | 89 | 39 | 2 | 52 | 139 | 88 | 173 | 1.49e-20 | 88.2 |
Msa0174590 | AT5G07310.1 | 73.770 | 61 | 16 | 0 | 73 | 133 | 88 | 148 | 2.45e-20 | 89.0 |
Msa0174590 | AT5G13910.1 | 51.899 | 79 | 35 | 1 | 61 | 136 | 1 | 79 | 2.99e-20 | 87.8 |
Msa0174590 | AT4G13620.1 | 66.102 | 59 | 20 | 0 | 76 | 134 | 231 | 289 | 7.62e-20 | 89.4 |
Msa0174590 | AT1G75490.1 | 50.000 | 76 | 38 | 0 | 77 | 152 | 42 | 117 | 9.38e-20 | 86.3 |
Msa0174590 | AT4G18450.1 | 71.875 | 64 | 14 | 3 | 71 | 132 | 106 | 167 | 1.13e-19 | 87.8 |
Msa0174590 | AT3G23240.1 | 50.000 | 84 | 40 | 2 | 77 | 158 | 82 | 165 | 2.18e-19 | 85.5 |
Msa0174590 | AT1G24590.1 | 67.857 | 56 | 18 | 0 | 77 | 132 | 58 | 113 | 2.30e-19 | 87.0 |
Msa0174590 | AT5G25190.1 | 48.193 | 83 | 30 | 1 | 77 | 159 | 8 | 77 | 2.61e-19 | 84.3 |
Msa0174590 | AT5G11590.1 | 50.617 | 81 | 36 | 1 | 63 | 139 | 33 | 113 | 2.84e-19 | 85.5 |
Msa0174590 | AT4G25480.1 | 44.340 | 106 | 51 | 3 | 29 | 134 | 11 | 108 | 2.93e-19 | 85.1 |
Msa0174590 | AT4G25490.1 | 43.519 | 108 | 57 | 2 | 27 | 134 | 2 | 105 | 2.96e-19 | 85.1 |
Msa0174590 | AT5G53290.1 | 66.071 | 56 | 19 | 0 | 77 | 132 | 125 | 180 | 3.19e-19 | 87.4 |
Msa0174590 | AT5G18450.1 | 62.500 | 56 | 21 | 0 | 77 | 132 | 34 | 89 | 3.82e-19 | 86.7 |
Msa0174590 | AT3G61630.1 | 67.857 | 56 | 18 | 0 | 77 | 132 | 105 | 160 | 3.90e-19 | 86.7 |
Msa0174590 | AT2G46310.1 | 66.071 | 56 | 19 | 0 | 77 | 132 | 99 | 154 | 4.77e-19 | 85.9 |
Msa0174590 | AT4G32800.1 | 60.345 | 58 | 23 | 0 | 76 | 133 | 18 | 75 | 4.93e-19 | 84.7 |
Msa0174590 | AT1G12980.1 | 66.071 | 56 | 19 | 0 | 77 | 132 | 57 | 112 | 5.98e-19 | 86.3 |
Msa0174590 | AT2G31230.1 | 65.000 | 60 | 20 | 1 | 77 | 135 | 86 | 145 | 6.00e-19 | 84.7 |
Msa0174590 | AT3G16280.1 | 60.345 | 58 | 23 | 0 | 76 | 133 | 60 | 117 | 6.15e-19 | 84.7 |
Msa0174590 | AT5G05410.2 | 60.000 | 60 | 24 | 0 | 77 | 136 | 79 | 138 | 7.00e-19 | 85.9 |
Msa0174590 | AT1G12890.1 | 56.338 | 71 | 31 | 0 | 62 | 132 | 6 | 76 | 7.03e-19 | 84.0 |
Msa0174590 | AT5G25810.1 | 53.425 | 73 | 33 | 1 | 63 | 134 | 21 | 93 | 7.04e-19 | 84.0 |
Msa0174590 | AT2G25820.1 | 59.677 | 62 | 25 | 0 | 76 | 137 | 25 | 86 | 8.64e-19 | 84.0 |
Msa0174590 | AT2G35700.1 | 50.667 | 75 | 33 | 1 | 77 | 151 | 45 | 115 | 8.92e-19 | 83.2 |
Msa0174590 | AT3G16280.2 | 60.345 | 58 | 23 | 0 | 76 | 133 | 78 | 135 | 9.11e-19 | 84.3 |
Msa0174590 | AT5G05410.1 | 60.000 | 60 | 24 | 0 | 77 | 136 | 79 | 138 | 9.44e-19 | 85.9 |
Msa0174590 | AT5G50080.2 | 67.692 | 65 | 21 | 0 | 71 | 135 | 80 | 144 | 1.10e-18 | 83.6 |
Msa0174590 | AT4G25470.1 | 46.739 | 92 | 45 | 2 | 43 | 134 | 21 | 108 | 1.18e-18 | 83.6 |
Msa0174590 | AT1G15360.1 | 63.158 | 57 | 21 | 0 | 77 | 133 | 7 | 63 | 1.25e-18 | 82.8 |
Msa0174590 | AT1G15360.2 | 63.158 | 57 | 21 | 0 | 77 | 133 | 7 | 63 | 1.25e-18 | 82.8 |
Msa0174590 | AT5G50080.1 | 67.692 | 65 | 21 | 0 | 71 | 135 | 71 | 135 | 1.30e-18 | 83.2 |
Msa0174590 | AT5G64750.1 | 74.000 | 50 | 13 | 0 | 84 | 133 | 192 | 241 | 1.41e-18 | 85.9 |
Msa0174590 | AT1G28160.1 | 61.667 | 60 | 23 | 0 | 77 | 136 | 39 | 98 | 1.50e-18 | 83.6 |
Msa0174590 | AT2G40340.2 | 59.649 | 57 | 23 | 0 | 77 | 133 | 14 | 70 | 1.99e-18 | 84.0 |
Msa0174590 | AT2G40340.5 | 59.649 | 57 | 23 | 0 | 77 | 133 | 14 | 70 | 1.99e-18 | 84.0 |
Msa0174590 | AT2G40340.4 | 59.649 | 57 | 23 | 0 | 77 | 133 | 14 | 70 | 1.99e-18 | 84.0 |
Msa0174590 | AT3G57600.1 | 62.069 | 58 | 22 | 0 | 77 | 134 | 28 | 85 | 2.17e-18 | 84.0 |
Msa0174590 | AT3G11020.1 | 61.404 | 57 | 22 | 0 | 77 | 133 | 78 | 134 | 2.62e-18 | 84.3 |
Msa0174590 | AT4G16750.1 | 49.367 | 79 | 36 | 1 | 77 | 155 | 40 | 114 | 3.00e-18 | 81.3 |
Msa0174590 | AT1G01250.1 | 40.594 | 101 | 45 | 1 | 50 | 135 | 3 | 103 | 4.32e-18 | 81.3 |
Msa0174590 | AT2G44940.1 | 39.167 | 120 | 67 | 2 | 77 | 196 | 100 | 213 | 5.01e-18 | 83.2 |
Msa0174590 | AT5G18560.1 | 43.220 | 118 | 54 | 5 | 63 | 168 | 41 | 157 | 5.86e-18 | 83.6 |
Msa0174590 | AT5G25390.2 | 61.404 | 57 | 22 | 0 | 77 | 133 | 7 | 63 | 7.97e-18 | 80.5 |
Msa0174590 | AT5G19790.1 | 56.250 | 64 | 28 | 0 | 71 | 134 | 16 | 79 | 9.05e-18 | 81.6 |
Msa0174590 | AT2G40340.3 | 48.780 | 82 | 39 | 1 | 55 | 133 | 47 | 128 | 9.28e-18 | 82.4 |
Msa0174590 | AT2G40340.6 | 48.780 | 82 | 39 | 1 | 55 | 133 | 54 | 135 | 9.69e-18 | 83.2 |
Msa0174590 | AT2G40340.1 | 59.649 | 57 | 23 | 0 | 77 | 133 | 72 | 128 | 1.15e-17 | 82.8 |
Msa0174590 | AT3G50260.1 | 49.315 | 73 | 37 | 0 | 61 | 133 | 5 | 77 | 1.36e-17 | 79.0 |
Msa0174590 | AT1G46768.3 | 46.067 | 89 | 44 | 1 | 46 | 134 | 4 | 88 | 1.48e-17 | 78.6 |
Msa0174590 | AT4G36900.1 | 53.968 | 63 | 29 | 0 | 71 | 133 | 24 | 86 | 1.78e-17 | 79.7 |
Msa0174590 | AT1G46768.1 | 46.067 | 89 | 44 | 1 | 46 | 134 | 4 | 88 | 1.81e-17 | 78.6 |
Msa0174590 | AT1G46768.2 | 46.067 | 89 | 44 | 1 | 46 | 134 | 4 | 88 | 1.81e-17 | 78.6 |
Msa0174590 | AT4G06746.1 | 48.000 | 75 | 39 | 0 | 61 | 135 | 20 | 94 | 2.15e-17 | 78.2 |
Msa0174590 | AT4G31060.1 | 53.333 | 60 | 28 | 0 | 76 | 135 | 26 | 85 | 2.23e-17 | 79.3 |
Msa0174590 | AT3G60490.1 | 59.649 | 57 | 23 | 0 | 77 | 133 | 71 | 127 | 3.24e-17 | 80.1 |
Msa0174590 | AT5G67190.1 | 53.030 | 66 | 31 | 0 | 68 | 133 | 12 | 77 | 4.45e-17 | 78.2 |
Msa0174590 | AT4G34410.1 | 70.000 | 60 | 18 | 0 | 77 | 136 | 136 | 195 | 7.06e-17 | 79.3 |
Msa0174590 | AT2G40350.2 | 54.386 | 57 | 26 | 0 | 77 | 133 | 74 | 130 | 8.80e-17 | 77.0 |
Msa0174590 | AT2G40350.1 | 54.386 | 57 | 26 | 0 | 77 | 133 | 67 | 123 | 1.08e-16 | 76.6 |
Msa0174590 | AT1G04370.1 | 71.667 | 60 | 16 | 1 | 77 | 135 | 20 | 79 | 1.14e-16 | 75.9 |
Msa0174590 | AT1G21910.1 | 44.615 | 65 | 36 | 0 | 77 | 141 | 50 | 114 | 1.42e-16 | 77.8 |
Msa0174590 | AT1G71130.1 | 53.247 | 77 | 27 | 2 | 77 | 144 | 79 | 155 | 1.46e-16 | 76.3 |
Msa0174590 | AT5G25390.1 | 59.649 | 57 | 20 | 1 | 77 | 133 | 7 | 60 | 1.99e-16 | 76.6 |
Msa0174590 | AT2G36450.1 | 56.250 | 64 | 27 | 1 | 73 | 135 | 11 | 74 | 2.03e-16 | 76.6 |
Msa0174590 | AT1G71450.1 | 56.140 | 57 | 25 | 0 | 77 | 133 | 24 | 80 | 2.36e-16 | 76.3 |
Msa0174590 | AT5G51990.1 | 48.750 | 80 | 39 | 1 | 53 | 132 | 32 | 109 | 2.41e-16 | 77.0 |
Msa0174590 | AT2G23340.1 | 57.895 | 57 | 24 | 0 | 77 | 133 | 28 | 84 | 3.39e-16 | 75.5 |
Msa0174590 | AT3G23220.1 | 70.000 | 60 | 17 | 1 | 77 | 135 | 14 | 73 | 4.53e-16 | 74.3 |
Msa0174590 | AT1G06160.1 | 56.000 | 75 | 32 | 1 | 77 | 150 | 82 | 156 | 1.30e-15 | 75.5 |
Msa0174590 | AT1G22985.1 | 56.338 | 71 | 28 | 2 | 74 | 141 | 72 | 142 | 1.61e-15 | 73.2 |
Msa0174590 | AT1G19210.1 | 51.724 | 58 | 28 | 0 | 77 | 134 | 12 | 69 | 1.68e-15 | 73.9 |
Msa0174590 | AT5G21960.1 | 53.448 | 58 | 27 | 0 | 77 | 134 | 7 | 64 | 2.22e-15 | 74.3 |
Msa0174590 | AT1G74930.1 | 38.889 | 90 | 51 | 1 | 66 | 155 | 10 | 95 | 3.49e-15 | 73.2 |
Msa0174590 | AT1G53170.1 | 71.429 | 56 | 16 | 0 | 77 | 132 | 31 | 86 | 1.69e-14 | 71.2 |
Msa0174590 | AT5G67000.1 | 49.275 | 69 | 33 | 1 | 63 | 131 | 109 | 175 | 2.08e-14 | 70.9 |
Msa0174590 | AT1G68550.1 | 71.111 | 45 | 11 | 1 | 79 | 123 | 115 | 157 | 2.10e-14 | 73.2 |
Msa0174590 | AT1G68550.2 | 71.111 | 45 | 11 | 1 | 79 | 123 | 115 | 157 | 2.10e-14 | 73.2 |
Msa0174590 | AT1G64380.1 | 62.121 | 66 | 25 | 0 | 72 | 137 | 131 | 196 | 2.34e-14 | 73.2 |
Msa0174590 | AT5G61590.1 | 53.659 | 82 | 33 | 2 | 77 | 153 | 107 | 188 | 3.18e-14 | 70.9 |
Msa0174590 | AT1G77200.1 | 61.404 | 57 | 22 | 0 | 77 | 133 | 43 | 99 | 4.27e-14 | 71.2 |
Msa0174590 | AT1G63030.2 | 46.875 | 64 | 34 | 0 | 69 | 132 | 22 | 85 | 3.70e-13 | 67.4 |
Msa0174590 | AT1G63030.1 | 46.875 | 64 | 34 | 0 | 69 | 132 | 22 | 85 | 3.70e-13 | 67.4 |
Msa0174590 | AT1G12610.1 | 45.455 | 66 | 36 | 0 | 69 | 134 | 22 | 87 | 5.62e-13 | 67.4 |
Msa0174590 | AT2G40220.1 | 64.286 | 56 | 20 | 0 | 77 | 132 | 55 | 110 | 2.72e-12 | 67.0 |
Msa0174590 | AT5G11190.1 | 48.810 | 84 | 39 | 2 | 77 | 159 | 7 | 87 | 3.19e-12 | 64.7 |
Msa0174590 | AT1G12630.1 | 48.718 | 78 | 38 | 2 | 65 | 141 | 6 | 82 | 5.41e-12 | 64.3 |
Msa0174590 | AT1G33760.1 | 53.968 | 63 | 29 | 0 | 77 | 139 | 20 | 82 | 8.90e-12 | 63.5 |
Msa0174590 | AT3G25890.1 | 40.860 | 93 | 41 | 3 | 27 | 116 | 89 | 170 | 1.36e-11 | 65.1 |
Msa0174590 | AT3G25890.2 | 40.860 | 93 | 41 | 3 | 27 | 116 | 89 | 170 | 1.36e-11 | 65.1 |
Msa0174590 | AT1G49120.1 | 62.222 | 45 | 17 | 0 | 77 | 121 | 87 | 131 | 3.22e-11 | 63.9 |
Msa0174590 | AT1G77640.1 | 50.000 | 64 | 32 | 0 | 71 | 134 | 37 | 100 | 3.80e-11 | 62.8 |
Find 70 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAATGAATTCGGTTATTT+TGG | 0.125184 | 1_4:+60271543 | Msa0174590:CDS |
AAGAATCTGAACTTGGAATT+TGG | 0.210782 | 1_4:+60271360 | Msa0174590:CDS |
GACAGCGTCCATGGGGAAAA+TGG | 0.219427 | 1_4:+60271097 | Msa0174590:CDS |
AACATGTGGTTGGAGATTTA+TGG | 0.220803 | 1_4:+60271775 | Msa0174590:CDS |
TATGGATGGAATTGTAAATT+TGG | 0.227734 | 1_4:+60271919 | Msa0174590:three_prime_UTR |
ACATGTTCCTGAACATTATT+AGG | 0.229532 | 1_4:-60271759 | None:intergenic |
GGTGATGAGAATTCTTTATT+TGG | 0.247700 | 1_4:+60271462 | Msa0174590:CDS |
TATAAGCTAATGAGAGGTTT+TGG | 0.298819 | 1_4:-60270663 | None:intergenic |
GTGATGAGAATTCTTTATTT+GGG | 0.326942 | 1_4:+60271463 | Msa0174590:CDS |
CCAGAACCAGATATGTTAAA+AGG | 0.329981 | 1_4:-60271438 | None:intergenic |
GAAACATTGTTAATTTCATT+TGG | 0.335785 | 1_4:-60272033 | None:intergenic |
CAAGAAAAGGGGTTCGTGTT+TGG | 0.361046 | 1_4:+60271139 | Msa0174590:CDS |
GAGAATTCTTTATTTGGGTC+TGG | 0.362302 | 1_4:+60271468 | Msa0174590:CDS |
CAGATTGACTCCTCAAACTT+CGG | 0.366892 | 1_4:+60270814 | Msa0174590:CDS |
GTCTCACCGCCTCGGAGCTC+TGG | 0.400447 | 1_4:+60270773 | Msa0174590:CDS |
TTCCCATTCTTATGATGATT+CGG | 0.402103 | 1_4:+60271875 | Msa0174590:three_prime_UTR |
GAGCTCTGGCCTAACTCATT+TGG | 0.406373 | 1_4:+60270787 | Msa0174590:CDS |
TCTGGTTCAGTTTCAGAGGT+TGG | 0.409258 | 1_4:+60271486 | Msa0174590:CDS |
TAACCGAATCATCATAAGAA+TGG | 0.417610 | 1_4:-60271878 | None:intergenic |
GATGCCACCTAATAATGTTC+AGG | 0.425054 | 1_4:+60271752 | Msa0174590:CDS |
ATAACCGAATTCATTCTGAT+TGG | 0.426762 | 1_4:-60271538 | None:intergenic |
TGAGAAAGAGAAAGAGAAAG+TGG | 0.432113 | 1_4:+60271584 | Msa0174590:CDS |
GGTTCCAATCAGAATGAATT+CGG | 0.437082 | 1_4:+60271534 | Msa0174590:CDS |
AGAATTGTCTGATGAATTGT+TGG | 0.447038 | 1_4:+60271677 | Msa0174590:CDS |
ATGGATGGAATTGTAAATTT+GGG | 0.449237 | 1_4:+60271920 | Msa0174590:three_prime_UTR |
GAGATTCGTGATCCAAGAAA+AGG | 0.454022 | 1_4:+60271126 | Msa0174590:CDS |
CTATCAGAAGAATCTGAACT+TGG | 0.461732 | 1_4:+60271353 | Msa0174590:CDS |
ATAATAATCCTCCACCGATT+CGG | 0.468591 | 1_4:+60271298 | Msa0174590:CDS |
GTATATTCATCATCTTCGTT+AGG | 0.470910 | 1_4:-60271252 | None:intergenic |
ATCTGTTGGCCAAATGAGTT+AGG | 0.473533 | 1_4:-60270796 | None:intergenic |
AACCGAATCATCATAAGAAT+GGG | 0.474735 | 1_4:-60271877 | None:intergenic |
AGATTCGTGATCCAAGAAAA+GGG | 0.484373 | 1_4:+60271127 | Msa0174590:CDS |
ACAGCGTCCATGGGGAAAAT+GGG | 0.486156 | 1_4:+60271098 | Msa0174590:CDS |
GGAAGCTTCTGTGGCCGAAT+CGG | 0.492257 | 1_4:-60271312 | None:intergenic |
CGGTGAGACGGCGGCCGTCA+CGG | 0.501058 | 1_4:-60270759 | None:intergenic |
GAGGGATTCGACAGCGTCCA+TGG | 0.515025 | 1_4:+60271088 | Msa0174590:CDS |
TGGGTCTGGTTCAGTTTCAG+AGG | 0.517060 | 1_4:+60271482 | Msa0174590:CDS |
GGTGAAATGGTGTTATGAAA+AGG | 0.518858 | 1_4:-60270638 | None:intergenic |
CGGCCGCCGTCTCACCGCCT+CGG | 0.526063 | 1_4:+60270765 | Msa0174590:CDS |
TTTATGTTAATGTGTTTGAG+TGG | 0.531423 | 1_4:-60270578 | None:intergenic |
TTCTGTGGCCGAATCGGTGG+AGG | 0.532952 | 1_4:-60271306 | None:intergenic |
AGGGATTCGACAGCGTCCAT+GGG | 0.533328 | 1_4:+60271089 | Msa0174590:CDS |
AGCTTCTGTGGCCGAATCGG+TGG | 0.534331 | 1_4:-60271309 | None:intergenic |
AAAGGGGTTCGTGTTTGGCT+CGG | 0.554321 | 1_4:+60271144 | Msa0174590:CDS |
GTTTGAGTGGGTTATTATTG+AGG | 0.560271 | 1_4:-60270565 | None:intergenic |
AATGTTCAGGAACATGTGGT+TGG | 0.570780 | 1_4:+60271765 | Msa0174590:CDS |
GTAACGACGAGTAGCATGAA+TGG | 0.574746 | 1_4:-60271274 | None:intergenic |
TAGTGTTGTTGATGATATAG+AGG | 0.578105 | 1_4:-60271333 | None:intergenic |
AGAGCTCCGAGGCGGTGAGA+CGG | 0.588227 | 1_4:-60270771 | None:intergenic |
AGTATTATGATTGATATGAG+AGG | 0.598353 | 1_4:-60270601 | None:intergenic |
TTATGTTAATGTGTTTGAGT+GGG | 0.599258 | 1_4:-60270577 | None:intergenic |
TGATATAGAGGAAGCTTCTG+TGG | 0.601854 | 1_4:-60271321 | None:intergenic |
GACTTCATTCCTCGCCGTGA+CGG | 0.602128 | 1_4:+60270745 | Msa0174590:CDS |
TTTAACATATCTGGTTCTGG+TGG | 0.603079 | 1_4:+60271441 | Msa0174590:CDS |
TCTGTGATGGAGTTCAATGG+TGG | 0.623309 | 1_4:+60271513 | Msa0174590:CDS |
TTGCTGTATAAGCTAATGAG+AGG | 0.624940 | 1_4:-60270669 | None:intergenic |
TGTTCCTGAACATTATTAGG+TGG | 0.627416 | 1_4:-60271756 | None:intergenic |
AGTTTGAGGAGTCAATCTGT+TGG | 0.630209 | 1_4:-60270810 | None:intergenic |
TGATGAATTGTTGGCATACG+AGG | 0.630433 | 1_4:+60271686 | Msa0174590:CDS |
GCTCCGAGGCGGTGAGACGG+CGG | 0.631172 | 1_4:-60270768 | None:intergenic |
AGAGGAAGAATCTCTACAGA+GGG | 0.631798 | 1_4:+60271070 | Msa0174590:CDS |
TAATAATGTTCAGGAACATG+TGG | 0.633928 | 1_4:+60271761 | Msa0174590:CDS |
AGACGGCGGCCGTCACGGCG+AGG | 0.634477 | 1_4:-60270754 | None:intergenic |
AAAAGATCACAGCCTCCCAA+AGG | 0.649152 | 1_4:+60270880 | Msa0174590:CDS |
TAGTAACTCTCACCTTTGGG+AGG | 0.656897 | 1_4:-60270892 | None:intergenic |
GATTCGTGATCCAAGAAAAG+GGG | 0.660902 | 1_4:+60271128 | Msa0174590:CDS |
CAGAGGAAGAATCTCTACAG+AGG | 0.663179 | 1_4:+60271069 | Msa0174590:CDS |
GGGATTCGACAGCGTCCATG+GGG | 0.691972 | 1_4:+60271090 | Msa0174590:CDS |
TGAGTTAGGCCAGAGCTCCG+AGG | 0.714089 | 1_4:-60270782 | None:intergenic |
GTTAGGCCAGAGCTCCGAGG+CGG | 0.715594 | 1_4:-60270779 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAACAAAAAAAATGAAAA+TGG | - | chr1_4:60270937-60270956 | None:intergenic | 10.0% |
!! | TTTAACAAAAAAAATGAAAA+TGG | - | chr1_4:60270937-60270956 | None:intergenic | 10.0% |
!!! | TTCATTTTTTTTGTTAAACT+CGG | + | chr1_4:60270939-60270958 | Msa0174590:intron | 15.0% |
!!! | TGTTGAAAATTTTCTTATTA+AGG | + | chr1_4:60270998-60271017 | Msa0174590:intron | 15.0% |
!!! | TTTGTTCAATTGTAATTTTT+TGG | + | chr1_4:60272003-60272022 | Msa0174590:three_prime_UTR | 15.0% |
!!! | TTCATTTTTTTTGTTAAACT+CGG | + | chr1_4:60270939-60270958 | Msa0174590:intron | 15.0% |
!!! | TGTTGAAAATTTTCTTATTA+AGG | + | chr1_4:60270998-60271017 | Msa0174590:intron | 15.0% |
!!! | TTTGTTCAATTGTAATTTTT+TGG | + | chr1_4:60272003-60272022 | Msa0174590:three_prime_UTR | 15.0% |
!! | ACAAAAAAAATGAAAATGGT+AGG | - | chr1_4:60270933-60270952 | None:intergenic | 20.0% |
!!! | TTTTATCAGATTTACTATGA+TGG | + | chr1_4:60271720-60271739 | Msa0174590:CDS | 20.0% |
!!! | TATCTATTTTTGAGTTTAGT+AGG | + | chr1_4:60271968-60271987 | Msa0174590:three_prime_UTR | 20.0% |
!! | GAAACATTGTTAATTTCATT+TGG | - | chr1_4:60272036-60272055 | None:intergenic | 20.0% |
!!! | AATTTTGTTTTTGTTGTGTT+TGG | - | chr1_4:60270524-60270543 | None:intergenic | 20.0% |
!! | ACAAAAAAAATGAAAATGGT+AGG | - | chr1_4:60270933-60270952 | None:intergenic | 20.0% |
!!! | TTTTATCAGATTTACTATGA+TGG | + | chr1_4:60271720-60271739 | Msa0174590:CDS | 20.0% |
!!! | TATCTATTTTTGAGTTTAGT+AGG | + | chr1_4:60271968-60271987 | Msa0174590:three_prime_UTR | 20.0% |
!! | GAAACATTGTTAATTTCATT+TGG | - | chr1_4:60272036-60272055 | None:intergenic | 20.0% |
! | TTATGTTAATGTGTTTGAGT+GGG | - | chr1_4:60270580-60270599 | None:intergenic | 25.0% |
! | TTTATGTTAATGTGTTTGAG+TGG | - | chr1_4:60270581-60270600 | None:intergenic | 25.0% |
! | AGTATTATGATTGATATGAG+AGG | - | chr1_4:60270604-60270623 | None:intergenic | 25.0% |
!!! | CATTATTTTAACAGAATGTG+TGG | + | chr1_4:60270706-60270725 | Msa0174590:exon | 25.0% |
! | CAAATGAAAAAGAAAGTAGT+CGG | - | chr1_4:60270980-60270999 | None:intergenic | 25.0% |
!! | AATTTTGAATTGTGTCAGTT+TGG | - | chr1_4:60271398-60271417 | None:intergenic | 25.0% |
!! | GTGATGAGAATTCTTTATTT+GGG | + | chr1_4:60271463-60271482 | Msa0174590:CDS | 25.0% |
!!! | AATAACTGTTTTTCATGCTT+CGG | + | chr1_4:60271817-60271836 | Msa0174590:three_prime_UTR | 25.0% |
! | TATGGATGGAATTGTAAATT+TGG | + | chr1_4:60271919-60271938 | Msa0174590:three_prime_UTR | 25.0% |
! | ATGGATGGAATTGTAAATTT+GGG | + | chr1_4:60271920-60271939 | Msa0174590:three_prime_UTR | 25.0% |
! | TTATGTTAATGTGTTTGAGT+GGG | - | chr1_4:60270580-60270599 | None:intergenic | 25.0% |
! | TTTATGTTAATGTGTTTGAG+TGG | - | chr1_4:60270581-60270600 | None:intergenic | 25.0% |
! | AGTATTATGATTGATATGAG+AGG | - | chr1_4:60270604-60270623 | None:intergenic | 25.0% |
!!! | CATTATTTTAACAGAATGTG+TGG | + | chr1_4:60270706-60270725 | Msa0174590:exon | 25.0% |
! | CAAATGAAAAAGAAAGTAGT+CGG | - | chr1_4:60270980-60270999 | None:intergenic | 25.0% |
!! | AATTTTGAATTGTGTCAGTT+TGG | - | chr1_4:60271398-60271417 | None:intergenic | 25.0% |
!! | GTGATGAGAATTCTTTATTT+GGG | + | chr1_4:60271463-60271482 | Msa0174590:CDS | 25.0% |
!!! | AATAACTGTTTTTCATGCTT+CGG | + | chr1_4:60271817-60271836 | Msa0174590:three_prime_UTR | 25.0% |
! | TATGGATGGAATTGTAAATT+TGG | + | chr1_4:60271919-60271938 | Msa0174590:three_prime_UTR | 25.0% |
! | ATGGATGGAATTGTAAATTT+GGG | + | chr1_4:60271920-60271939 | Msa0174590:three_prime_UTR | 25.0% |
! | TATAAGCTAATGAGAGGTTT+TGG | - | chr1_4:60270666-60270685 | None:intergenic | 30.0% |
!!! | TATTTTAACAGAATGTGTGG+TGG | + | chr1_4:60270709-60270728 | Msa0174590:exon | 30.0% |
AAATAGTAACTCTCACCTTT+GGG | - | chr1_4:60270898-60270917 | None:intergenic | 30.0% | |
AAAATAGTAACTCTCACCTT+TGG | - | chr1_4:60270899-60270918 | None:intergenic | 30.0% | |
GTATATTCATCATCTTCGTT+AGG | - | chr1_4:60271255-60271274 | None:intergenic | 30.0% | |
!! | TAGTGTTGTTGATGATATAG+AGG | - | chr1_4:60271336-60271355 | None:intergenic | 30.0% |
AAGAATCTGAACTTGGAATT+TGG | + | chr1_4:60271360-60271379 | Msa0174590:CDS | 30.0% | |
GGTGATGAGAATTCTTTATT+TGG | + | chr1_4:60271462-60271481 | Msa0174590:CDS | 30.0% | |
ATAACCGAATTCATTCTGAT+TGG | - | chr1_4:60271541-60271560 | None:intergenic | 30.0% | |
! | CAGAATGAATTCGGTTATTT+TGG | + | chr1_4:60271543-60271562 | Msa0174590:CDS | 30.0% |
!!! | AATGAATTCGGTTATTTTGG+TGG | + | chr1_4:60271546-60271565 | Msa0174590:CDS | 30.0% |
AGCTGAATTAGCAAAAAATG+AGG | + | chr1_4:60271650-60271669 | Msa0174590:CDS | 30.0% | |
AGAATTGTCTGATGAATTGT+TGG | + | chr1_4:60271677-60271696 | Msa0174590:CDS | 30.0% | |
ACATGTTCCTGAACATTATT+AGG | - | chr1_4:60271762-60271781 | None:intergenic | 30.0% | |
TAATAATGTTCAGGAACATG+TGG | + | chr1_4:60271761-60271780 | Msa0174590:CDS | 30.0% | |
AAAAATTCTGTCTTCACAGA+AGG | - | chr1_4:60271857-60271876 | None:intergenic | 30.0% | |
TTCCCATTCTTATGATGATT+CGG | + | chr1_4:60271875-60271894 | Msa0174590:three_prime_UTR | 30.0% | |
AACCGAATCATCATAAGAAT+GGG | - | chr1_4:60271880-60271899 | None:intergenic | 30.0% | |
TAACCGAATCATCATAAGAA+TGG | - | chr1_4:60271881-60271900 | None:intergenic | 30.0% | |
! | GGTTATCTCTATTTTGCATT+TGG | + | chr1_4:60271896-60271915 | Msa0174590:three_prime_UTR | 30.0% |
! | TCTCTATTTTGCATTTGGTA+TGG | + | chr1_4:60271901-60271920 | Msa0174590:three_prime_UTR | 30.0% |
! | TATTTTGCATTTGGTATGGA+TGG | + | chr1_4:60271905-60271924 | Msa0174590:three_prime_UTR | 30.0% |
! | TATAAGCTAATGAGAGGTTT+TGG | - | chr1_4:60270666-60270685 | None:intergenic | 30.0% |
!!! | TATTTTAACAGAATGTGTGG+TGG | + | chr1_4:60270709-60270728 | Msa0174590:exon | 30.0% |
AAATAGTAACTCTCACCTTT+GGG | - | chr1_4:60270898-60270917 | None:intergenic | 30.0% | |
AAAATAGTAACTCTCACCTT+TGG | - | chr1_4:60270899-60270918 | None:intergenic | 30.0% | |
GTATATTCATCATCTTCGTT+AGG | - | chr1_4:60271255-60271274 | None:intergenic | 30.0% | |
!! | TAGTGTTGTTGATGATATAG+AGG | - | chr1_4:60271336-60271355 | None:intergenic | 30.0% |
AAGAATCTGAACTTGGAATT+TGG | + | chr1_4:60271360-60271379 | Msa0174590:CDS | 30.0% | |
GGTGATGAGAATTCTTTATT+TGG | + | chr1_4:60271462-60271481 | Msa0174590:CDS | 30.0% | |
ATAACCGAATTCATTCTGAT+TGG | - | chr1_4:60271541-60271560 | None:intergenic | 30.0% | |
! | CAGAATGAATTCGGTTATTT+TGG | + | chr1_4:60271543-60271562 | Msa0174590:CDS | 30.0% |
!!! | AATGAATTCGGTTATTTTGG+TGG | + | chr1_4:60271546-60271565 | Msa0174590:CDS | 30.0% |
AGCTGAATTAGCAAAAAATG+AGG | + | chr1_4:60271650-60271669 | Msa0174590:CDS | 30.0% | |
AGAATTGTCTGATGAATTGT+TGG | + | chr1_4:60271677-60271696 | Msa0174590:CDS | 30.0% | |
ACATGTTCCTGAACATTATT+AGG | - | chr1_4:60271762-60271781 | None:intergenic | 30.0% | |
TAATAATGTTCAGGAACATG+TGG | + | chr1_4:60271761-60271780 | Msa0174590:CDS | 30.0% | |
AAAAATTCTGTCTTCACAGA+AGG | - | chr1_4:60271857-60271876 | None:intergenic | 30.0% | |
TTCCCATTCTTATGATGATT+CGG | + | chr1_4:60271875-60271894 | Msa0174590:three_prime_UTR | 30.0% | |
AACCGAATCATCATAAGAAT+GGG | - | chr1_4:60271880-60271899 | None:intergenic | 30.0% | |
TAACCGAATCATCATAAGAA+TGG | - | chr1_4:60271881-60271900 | None:intergenic | 30.0% | |
! | GGTTATCTCTATTTTGCATT+TGG | + | chr1_4:60271896-60271915 | Msa0174590:three_prime_UTR | 30.0% |
! | TCTCTATTTTGCATTTGGTA+TGG | + | chr1_4:60271901-60271920 | Msa0174590:three_prime_UTR | 30.0% |
! | TATTTTGCATTTGGTATGGA+TGG | + | chr1_4:60271905-60271924 | Msa0174590:three_prime_UTR | 30.0% |
!! | GTTTGAGTGGGTTATTATTG+AGG | - | chr1_4:60270568-60270587 | None:intergenic | 35.0% |
!! | GGTGAAATGGTGTTATGAAA+AGG | - | chr1_4:60270641-60270660 | None:intergenic | 35.0% |
TTGCTGTATAAGCTAATGAG+AGG | - | chr1_4:60270672-60270691 | None:intergenic | 35.0% | |
ATGAGAAAAACCGAAGTTTG+AGG | - | chr1_4:60270827-60270846 | None:intergenic | 35.0% | |
! | AACTTCGGTTTTTCTCATAC+TGG | + | chr1_4:60270829-60270848 | Msa0174590:CDS | 35.0% |
!!! | TGTGATCTTTTGAGAGTGTT+GGG | - | chr1_4:60270871-60270890 | None:intergenic | 35.0% |
!!! | TTCTTCCTCTGTTTTTTCAG+TGG | - | chr1_4:60271060-60271079 | None:intergenic | 35.0% |
AGATTCGTGATCCAAGAAAA+GGG | + | chr1_4:60271127-60271146 | Msa0174590:CDS | 35.0% | |
!!! | TAACCTTAGCTTTTTTGCCA+CGG | - | chr1_4:60271227-60271246 | None:intergenic | 35.0% |
! | ATAATAATCCTCCACCGATT+CGG | + | chr1_4:60271298-60271317 | Msa0174590:CDS | 35.0% |
CTATCAGAAGAATCTGAACT+TGG | + | chr1_4:60271353-60271372 | Msa0174590:CDS | 35.0% | |
! | GCTGAACCTTTTAACATATC+TGG | + | chr1_4:60271432-60271451 | Msa0174590:CDS | 35.0% |
CCAGAACCAGATATGTTAAA+AGG | - | chr1_4:60271441-60271460 | None:intergenic | 35.0% | |
!! | CCTTTTAACATATCTGGTTC+TGG | + | chr1_4:60271438-60271457 | Msa0174590:CDS | 35.0% |
!! | TTTAACATATCTGGTTCTGG+TGG | + | chr1_4:60271441-60271460 | Msa0174590:CDS | 35.0% |
! | GAGAATTCTTTATTTGGGTC+TGG | + | chr1_4:60271468-60271487 | Msa0174590:CDS | 35.0% |
!! | TTTTCTGTGATGGAGTTCAA+TGG | + | chr1_4:60271510-60271529 | Msa0174590:CDS | 35.0% |
GGTTCCAATCAGAATGAATT+CGG | + | chr1_4:60271534-60271553 | Msa0174590:CDS | 35.0% | |
TGAGAAAGAGAAAGAGAAAG+TGG | + | chr1_4:60271584-60271603 | Msa0174590:CDS | 35.0% | |
TGTTCCTGAACATTATTAGG+TGG | - | chr1_4:60271759-60271778 | None:intergenic | 35.0% | |
AACATGTGGTTGGAGATTTA+TGG | + | chr1_4:60271775-60271794 | Msa0174590:CDS | 35.0% | |
!! | GTTTGAGTGGGTTATTATTG+AGG | - | chr1_4:60270568-60270587 | None:intergenic | 35.0% |
!! | GGTGAAATGGTGTTATGAAA+AGG | - | chr1_4:60270641-60270660 | None:intergenic | 35.0% |
TTGCTGTATAAGCTAATGAG+AGG | - | chr1_4:60270672-60270691 | None:intergenic | 35.0% | |
ATGAGAAAAACCGAAGTTTG+AGG | - | chr1_4:60270827-60270846 | None:intergenic | 35.0% | |
! | AACTTCGGTTTTTCTCATAC+TGG | + | chr1_4:60270829-60270848 | Msa0174590:CDS | 35.0% |
!!! | TGTGATCTTTTGAGAGTGTT+GGG | - | chr1_4:60270871-60270890 | None:intergenic | 35.0% |
!!! | TTCTTCCTCTGTTTTTTCAG+TGG | - | chr1_4:60271060-60271079 | None:intergenic | 35.0% |
AGATTCGTGATCCAAGAAAA+GGG | + | chr1_4:60271127-60271146 | Msa0174590:CDS | 35.0% | |
!!! | TAACCTTAGCTTTTTTGCCA+CGG | - | chr1_4:60271227-60271246 | None:intergenic | 35.0% |
! | ATAATAATCCTCCACCGATT+CGG | + | chr1_4:60271298-60271317 | Msa0174590:CDS | 35.0% |
CTATCAGAAGAATCTGAACT+TGG | + | chr1_4:60271353-60271372 | Msa0174590:CDS | 35.0% | |
! | GCTGAACCTTTTAACATATC+TGG | + | chr1_4:60271432-60271451 | Msa0174590:CDS | 35.0% |
CCAGAACCAGATATGTTAAA+AGG | - | chr1_4:60271441-60271460 | None:intergenic | 35.0% | |
!! | CCTTTTAACATATCTGGTTC+TGG | + | chr1_4:60271438-60271457 | Msa0174590:CDS | 35.0% |
!! | TTTAACATATCTGGTTCTGG+TGG | + | chr1_4:60271441-60271460 | Msa0174590:CDS | 35.0% |
! | GAGAATTCTTTATTTGGGTC+TGG | + | chr1_4:60271468-60271487 | Msa0174590:CDS | 35.0% |
!! | TTTTCTGTGATGGAGTTCAA+TGG | + | chr1_4:60271510-60271529 | Msa0174590:CDS | 35.0% |
GGTTCCAATCAGAATGAATT+CGG | + | chr1_4:60271534-60271553 | Msa0174590:CDS | 35.0% | |
TGAGAAAGAGAAAGAGAAAG+TGG | + | chr1_4:60271584-60271603 | Msa0174590:CDS | 35.0% | |
TGTTCCTGAACATTATTAGG+TGG | - | chr1_4:60271759-60271778 | None:intergenic | 35.0% | |
AACATGTGGTTGGAGATTTA+TGG | + | chr1_4:60271775-60271794 | Msa0174590:CDS | 35.0% | |
!!! | AGCTAATGAGAGGTTTTGGA+GGG | - | chr1_4:60270662-60270681 | None:intergenic | 40.0% |
!! | AAGCTAATGAGAGGTTTTGG+AGG | - | chr1_4:60270663-60270682 | None:intergenic | 40.0% |
ATCTGTTGGCCAAATGAGTT+AGG | - | chr1_4:60270799-60270818 | None:intergenic | 40.0% | |
AGTTTGAGGAGTCAATCTGT+TGG | - | chr1_4:60270813-60270832 | None:intergenic | 40.0% | |
! | CAGATTGACTCCTCAAACTT+CGG | + | chr1_4:60270814-60270833 | Msa0174590:CDS | 40.0% |
!! | CTGTGATCTTTTGAGAGTGT+TGG | - | chr1_4:60270872-60270891 | None:intergenic | 40.0% |
AGAAGCCACTGAAAAAACAG+AGG | + | chr1_4:60271052-60271071 | Msa0174590:CDS | 40.0% | |
AGAGGAAGAATCTCTACAGA+GGG | + | chr1_4:60271070-60271089 | Msa0174590:CDS | 40.0% | |
GAGATTCGTGATCCAAGAAA+AGG | + | chr1_4:60271126-60271145 | Msa0174590:CDS | 40.0% | |
GATTCGTGATCCAAGAAAAG+GGG | + | chr1_4:60271128-60271147 | Msa0174590:CDS | 40.0% | |
AAAGAAGCTCGAAAAATCCG+TGG | + | chr1_4:60271207-60271226 | Msa0174590:CDS | 40.0% | |
AATCCGTGGCAAAAAAGCTA+AGG | + | chr1_4:60271221-60271240 | Msa0174590:CDS | 40.0% | |
TGATATAGAGGAAGCTTCTG+TGG | - | chr1_4:60271324-60271343 | None:intergenic | 40.0% | |
!!! | AGAGGTTGGTTTTTCTGTGA+TGG | + | chr1_4:60271500-60271519 | Msa0174590:CDS | 40.0% |
TGATGAATTGTTGGCATACG+AGG | + | chr1_4:60271686-60271705 | Msa0174590:CDS | 40.0% | |
GATGCCACCTAATAATGTTC+AGG | + | chr1_4:60271752-60271771 | Msa0174590:CDS | 40.0% | |
AATGTTCAGGAACATGTGGT+TGG | + | chr1_4:60271765-60271784 | Msa0174590:CDS | 40.0% | |
!!! | AGCTAATGAGAGGTTTTGGA+GGG | - | chr1_4:60270662-60270681 | None:intergenic | 40.0% |
!! | AAGCTAATGAGAGGTTTTGG+AGG | - | chr1_4:60270663-60270682 | None:intergenic | 40.0% |
ATCTGTTGGCCAAATGAGTT+AGG | - | chr1_4:60270799-60270818 | None:intergenic | 40.0% | |
AGTTTGAGGAGTCAATCTGT+TGG | - | chr1_4:60270813-60270832 | None:intergenic | 40.0% | |
! | CAGATTGACTCCTCAAACTT+CGG | + | chr1_4:60270814-60270833 | Msa0174590:CDS | 40.0% |
!! | CTGTGATCTTTTGAGAGTGT+TGG | - | chr1_4:60270872-60270891 | None:intergenic | 40.0% |
AGAAGCCACTGAAAAAACAG+AGG | + | chr1_4:60271052-60271071 | Msa0174590:CDS | 40.0% | |
AGAGGAAGAATCTCTACAGA+GGG | + | chr1_4:60271070-60271089 | Msa0174590:CDS | 40.0% | |
GAGATTCGTGATCCAAGAAA+AGG | + | chr1_4:60271126-60271145 | Msa0174590:CDS | 40.0% | |
GATTCGTGATCCAAGAAAAG+GGG | + | chr1_4:60271128-60271147 | Msa0174590:CDS | 40.0% | |
AAAGAAGCTCGAAAAATCCG+TGG | + | chr1_4:60271207-60271226 | Msa0174590:CDS | 40.0% | |
AATCCGTGGCAAAAAAGCTA+AGG | + | chr1_4:60271221-60271240 | Msa0174590:CDS | 40.0% | |
TGATATAGAGGAAGCTTCTG+TGG | - | chr1_4:60271324-60271343 | None:intergenic | 40.0% | |
!!! | AGAGGTTGGTTTTTCTGTGA+TGG | + | chr1_4:60271500-60271519 | Msa0174590:CDS | 40.0% |
TGATGAATTGTTGGCATACG+AGG | + | chr1_4:60271686-60271705 | Msa0174590:CDS | 40.0% | |
GATGCCACCTAATAATGTTC+AGG | + | chr1_4:60271752-60271771 | Msa0174590:CDS | 40.0% | |
AATGTTCAGGAACATGTGGT+TGG | + | chr1_4:60271765-60271784 | Msa0174590:CDS | 40.0% | |
!!! | AGAGGTTTTGGAGGGTGAAA+TGG | - | chr1_4:60270654-60270673 | None:intergenic | 45.0% |
!!! | GATCTTTTGAGAGTGTTGGG+TGG | - | chr1_4:60270868-60270887 | None:intergenic | 45.0% |
AAAAGATCACAGCCTCCCAA+AGG | + | chr1_4:60270880-60270899 | Msa0174590:CDS | 45.0% | |
TAGTAACTCTCACCTTTGGG+AGG | - | chr1_4:60270895-60270914 | None:intergenic | 45.0% | |
CAGAGGAAGAATCTCTACAG+AGG | + | chr1_4:60271069-60271088 | Msa0174590:CDS | 45.0% | |
! | CAAACACGAACCCCTTTTCT+TGG | - | chr1_4:60271141-60271160 | None:intergenic | 45.0% |
CAAGAAAAGGGGTTCGTGTT+TGG | + | chr1_4:60271139-60271158 | Msa0174590:CDS | 45.0% | |
GTAACGACGAGTAGCATGAA+TGG | - | chr1_4:60271277-60271296 | None:intergenic | 45.0% | |
! | TCTGGTTCAGTTTCAGAGGT+TGG | + | chr1_4:60271486-60271505 | Msa0174590:CDS | 45.0% |
! | TCTGTGATGGAGTTCAATGG+TGG | + | chr1_4:60271513-60271532 | Msa0174590:CDS | 45.0% |
!!! | AGAGGTTTTGGAGGGTGAAA+TGG | - | chr1_4:60270654-60270673 | None:intergenic | 45.0% |
!!! | GATCTTTTGAGAGTGTTGGG+TGG | - | chr1_4:60270868-60270887 | None:intergenic | 45.0% |
AAAAGATCACAGCCTCCCAA+AGG | + | chr1_4:60270880-60270899 | Msa0174590:CDS | 45.0% | |
TAGTAACTCTCACCTTTGGG+AGG | - | chr1_4:60270895-60270914 | None:intergenic | 45.0% | |
CAGAGGAAGAATCTCTACAG+AGG | + | chr1_4:60271069-60271088 | Msa0174590:CDS | 45.0% | |
! | CAAACACGAACCCCTTTTCT+TGG | - | chr1_4:60271141-60271160 | None:intergenic | 45.0% |
CAAGAAAAGGGGTTCGTGTT+TGG | + | chr1_4:60271139-60271158 | Msa0174590:CDS | 45.0% | |
GTAACGACGAGTAGCATGAA+TGG | - | chr1_4:60271277-60271296 | None:intergenic | 45.0% | |
! | TCTGGTTCAGTTTCAGAGGT+TGG | + | chr1_4:60271486-60271505 | Msa0174590:CDS | 45.0% |
! | TCTGTGATGGAGTTCAATGG+TGG | + | chr1_4:60271513-60271532 | Msa0174590:CDS | 45.0% |
! | GAGCTCTGGCCTAACTCATT+TGG | + | chr1_4:60270787-60270806 | Msa0174590:CDS | 50.0% |
ACAGCGTCCATGGGGAAAAT+GGG | + | chr1_4:60271098-60271117 | Msa0174590:CDS | 50.0% | |
AAAGGGGTTCGTGTTTGGCT+CGG | + | chr1_4:60271144-60271163 | Msa0174590:CDS | 50.0% | |
! | TGGGTCTGGTTCAGTTTCAG+AGG | + | chr1_4:60271482-60271501 | Msa0174590:CDS | 50.0% |
! | GAGCTCTGGCCTAACTCATT+TGG | + | chr1_4:60270787-60270806 | Msa0174590:CDS | 50.0% |
ACAGCGTCCATGGGGAAAAT+GGG | + | chr1_4:60271098-60271117 | Msa0174590:CDS | 50.0% | |
AAAGGGGTTCGTGTTTGGCT+CGG | + | chr1_4:60271144-60271163 | Msa0174590:CDS | 50.0% | |
! | TGGGTCTGGTTCAGTTTCAG+AGG | + | chr1_4:60271482-60271501 | Msa0174590:CDS | 50.0% |
GACTTCATTCCTCGCCGTGA+CGG | + | chr1_4:60270745-60270764 | Msa0174590:CDS | 55.0% | |
AGGGATTCGACAGCGTCCAT+GGG | + | chr1_4:60271089-60271108 | Msa0174590:CDS | 55.0% | |
GACAGCGTCCATGGGGAAAA+TGG | + | chr1_4:60271097-60271116 | Msa0174590:CDS | 55.0% | |
! | TCTGCAGCCCATTTTCCCCA+TGG | - | chr1_4:60271108-60271127 | None:intergenic | 55.0% |
GGAAGCTTCTGTGGCCGAAT+CGG | - | chr1_4:60271315-60271334 | None:intergenic | 55.0% | |
GACTTCATTCCTCGCCGTGA+CGG | + | chr1_4:60270745-60270764 | Msa0174590:CDS | 55.0% | |
AGGGATTCGACAGCGTCCAT+GGG | + | chr1_4:60271089-60271108 | Msa0174590:CDS | 55.0% | |
GACAGCGTCCATGGGGAAAA+TGG | + | chr1_4:60271097-60271116 | Msa0174590:CDS | 55.0% | |
! | TCTGCAGCCCATTTTCCCCA+TGG | - | chr1_4:60271108-60271127 | None:intergenic | 55.0% |
GGAAGCTTCTGTGGCCGAAT+CGG | - | chr1_4:60271315-60271334 | None:intergenic | 55.0% | |
TGAGTTAGGCCAGAGCTCCG+AGG | - | chr1_4:60270785-60270804 | None:intergenic | 60.0% | |
GAGGGATTCGACAGCGTCCA+TGG | + | chr1_4:60271088-60271107 | Msa0174590:CDS | 60.0% | |
GGGATTCGACAGCGTCCATG+GGG | + | chr1_4:60271090-60271109 | Msa0174590:CDS | 60.0% | |
TTCTGTGGCCGAATCGGTGG+AGG | - | chr1_4:60271309-60271328 | None:intergenic | 60.0% | |
AGCTTCTGTGGCCGAATCGG+TGG | - | chr1_4:60271312-60271331 | None:intergenic | 60.0% | |
TGAGTTAGGCCAGAGCTCCG+AGG | - | chr1_4:60270785-60270804 | None:intergenic | 60.0% | |
GAGGGATTCGACAGCGTCCA+TGG | + | chr1_4:60271088-60271107 | Msa0174590:CDS | 60.0% | |
GGGATTCGACAGCGTCCATG+GGG | + | chr1_4:60271090-60271109 | Msa0174590:CDS | 60.0% | |
TTCTGTGGCCGAATCGGTGG+AGG | - | chr1_4:60271309-60271328 | None:intergenic | 60.0% | |
AGCTTCTGTGGCCGAATCGG+TGG | - | chr1_4:60271312-60271331 | None:intergenic | 60.0% | |
AGAGCTCCGAGGCGGTGAGA+CGG | - | chr1_4:60270774-60270793 | None:intergenic | 65.0% | |
GTTAGGCCAGAGCTCCGAGG+CGG | - | chr1_4:60270782-60270801 | None:intergenic | 65.0% | |
AGAGCTCCGAGGCGGTGAGA+CGG | - | chr1_4:60270774-60270793 | None:intergenic | 65.0% | |
GTTAGGCCAGAGCTCCGAGG+CGG | - | chr1_4:60270782-60270801 | None:intergenic | 65.0% | |
GTCTCACCGCCTCGGAGCTC+TGG | + | chr1_4:60270773-60270792 | Msa0174590:CDS | 70.0% | |
GTCTCACCGCCTCGGAGCTC+TGG | + | chr1_4:60270773-60270792 | Msa0174590:CDS | 70.0% | |
CGGTGAGACGGCGGCCGTCA+CGG | - | chr1_4:60270762-60270781 | None:intergenic | 75.0% | |
GCTCCGAGGCGGTGAGACGG+CGG | - | chr1_4:60270771-60270790 | None:intergenic | 75.0% | |
CGGTGAGACGGCGGCCGTCA+CGG | - | chr1_4:60270762-60270781 | None:intergenic | 75.0% | |
GCTCCGAGGCGGTGAGACGG+CGG | - | chr1_4:60270771-60270790 | None:intergenic | 75.0% | |
! | AGACGGCGGCCGTCACGGCG+AGG | - | chr1_4:60270757-60270776 | None:intergenic | 80.0% |
! | CGGCCGCCGTCTCACCGCCT+CGG | + | chr1_4:60270765-60270784 | Msa0174590:CDS | 80.0% |
! | AGACGGCGGCCGTCACGGCG+AGG | - | chr1_4:60270757-60270776 | None:intergenic | 80.0% |
! | CGGCCGCCGTCTCACCGCCT+CGG | + | chr1_4:60270765-60270784 | Msa0174590:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 60270523 | 60272061 | 60270523 | ID=Msa0174590;Name=Msa0174590 |
chr1_4 | mRNA | 60270523 | 60272061 | 60270523 | ID=Msa0174590-mRNA-1;Parent=Msa0174590;Name=Msa0174590-mRNA-1;_AED=0.04;_eAED=0.04;_QI=198|1|1|1|1|1|2|252|317 |
chr1_4 | exon | 60270523 | 60270901 | 60270523 | ID=Msa0174590-mRNA-1:exon:19021;Parent=Msa0174590-mRNA-1 |
chr1_4 | exon | 60271037 | 60272061 | 60271037 | ID=Msa0174590-mRNA-1:exon:19022;Parent=Msa0174590-mRNA-1 |
chr1_4 | five_prime_UTR | 60270523 | 60270720 | 60270523 | ID=Msa0174590-mRNA-1:five_prime_utr;Parent=Msa0174590-mRNA-1 |
chr1_4 | CDS | 60270721 | 60270901 | 60270721 | ID=Msa0174590-mRNA-1:cds;Parent=Msa0174590-mRNA-1 |
chr1_4 | CDS | 60271037 | 60271809 | 60271037 | ID=Msa0174590-mRNA-1:cds;Parent=Msa0174590-mRNA-1 |
chr1_4 | three_prime_UTR | 60271810 | 60272061 | 60271810 | ID=Msa0174590-mRNA-1:three_prime_utr;Parent=Msa0174590-mRNA-1 |
Gene Sequence |
Protein sequence |