AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0182840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182840 MtrunA17_Chr1g0210091 96.455 536 17 1 1 534 1 536 0.0 1070
Msa0182840 MtrunA17_Chr5g0432751 65.762 479 156 4 59 533 29 503 0.0 664
Msa0182840 MtrunA17_Chr2g0310391 30.920 511 312 14 37 530 3 489 6.87e-75 245
Msa0182840 MtrunA17_Chr8g0382901 32.609 506 317 13 31 530 463 950 2.20e-74 254
Msa0182840 MtrunA17_Chr8g0382901 31.263 483 295 11 42 517 7 459 9.79e-67 233
Msa0182840 MtrunA17_Chr7g0255531 32.623 469 290 10 64 520 29 483 3.58e-74 244
Msa0182840 MtrunA17_Chr3g0101571 31.423 471 291 11 64 523 37 486 2.83e-73 241
Msa0182840 MtrunA17_Chr5g0405001 31.323 514 313 13 36 533 21 510 6.71e-73 241
Msa0182840 MtrunA17_Chr3g0101721 29.492 512 322 13 44 535 15 507 1.20e-72 240
Msa0182840 MtrunA17_Chr4g0047661 31.828 487 306 12 43 517 29 501 1.55e-72 240
Msa0182840 MtrunA17_Chr4g0047631 32.422 512 301 15 16 514 14 493 5.12e-72 238
Msa0182840 MtrunA17_Chr5g0445441 30.864 486 306 12 43 517 59 525 1.31e-71 238
Msa0182840 MtrunA17_Chr3g0101581 28.743 501 326 10 33 523 10 489 3.36e-71 236
Msa0182840 MtrunA17_Chr2g0310381 31.493 489 295 14 55 526 20 485 3.55e-71 236
Msa0182840 MtrunA17_Chr5g0445461 29.746 511 312 14 43 535 18 499 6.04e-71 235
Msa0182840 MtrunA17_Chr3g0101731 30.290 482 304 11 64 533 37 498 6.54e-71 235
Msa0182840 MtrunA17_Chr4g0047641 30.675 489 310 11 43 517 27 500 8.92e-71 235
Msa0182840 MtrunA17_Chr8g0361471 29.435 513 319 11 44 530 11 506 1.03e-70 234
Msa0182840 MtrunA17_Chr4g0058231 30.478 502 301 13 40 517 5 482 1.66e-70 234
Msa0182840 MtrunA17_Chr8g0356001 28.916 498 335 10 42 534 21 504 1.88e-70 234
Msa0182840 MtrunA17_Chr5g0431641 27.168 519 343 10 28 534 3 498 2.34e-70 233
Msa0182840 MtrunA17_Chr3g0116741 30.214 513 325 14 32 534 25 514 2.48e-70 234
Msa0182840 MtrunA17_Chr6g0472311 29.672 519 326 12 37 533 15 516 3.06e-70 234
Msa0182840 MtrunA17_Chr4g0047691 31.328 482 298 11 49 517 38 499 5.16e-70 233
Msa0182840 MtrunA17_Chr4g0011901 32.272 471 284 13 52 507 17 467 9.72e-70 232
Msa0182840 MtrunA17_Chr3g0101611 30.309 485 302 12 64 534 39 501 1.72e-69 231
Msa0182840 MtrunA17_Chr5g0403351 29.600 500 309 12 40 517 9 487 2.62e-69 231
Msa0182840 MtrunA17_Chr5g0403331 30.498 482 307 10 64 533 36 501 7.74e-69 229
Msa0182840 MtrunA17_Chr5g0403321 29.508 488 307 13 64 533 35 503 8.61e-69 229
Msa0182840 MtrunA17_Chr5g0445451 29.505 505 321 11 43 535 18 499 1.45e-68 229
Msa0182840 MtrunA17_Chr6g0484811 30.237 506 320 14 43 533 15 502 3.07e-68 228
Msa0182840 MtrunA17_Chr4g0058281 30.408 490 305 12 40 514 27 495 4.20e-68 228
Msa0182840 MtrunA17_Chr3g0116681 29.940 501 330 11 39 533 17 502 8.33e-68 227
Msa0182840 MtrunA17_Chr5g0445421 29.273 509 302 13 24 517 72 537 1.18e-67 228
Msa0182840 MtrunA17_Chr6g0465511 28.125 512 327 11 44 530 11 506 1.84e-67 226
Msa0182840 MtrunA17_Chr5g0401691 31.590 459 290 10 64 517 52 491 2.48e-67 226
Msa0182840 MtrunA17_Chr8g0355961 30.723 498 326 12 43 534 20 504 4.31e-67 225
Msa0182840 MtrunA17_Chr3g0101601 31.198 484 306 12 45 517 14 481 6.45e-67 224
Msa0182840 MtrunA17_Chr3g0101811 28.687 495 309 11 64 533 38 513 9.01e-67 224
Msa0182840 MtrunA17_Chr5g0445381 30.000 470 289 10 64 517 70 515 1.26e-66 224
Msa0182840 MtrunA17_Chr1g0162811 30.178 507 318 13 43 533 11 497 1.79e-66 223
Msa0182840 MtrunA17_Chr6g0466331 27.930 512 328 11 44 530 11 506 2.06e-66 223
Msa0182840 MtrunA17_Chr3g0086691 31.692 467 310 8 72 533 41 503 3.47e-66 223
Msa0182840 MtrunA17_Chr3g0094171 32.258 465 281 14 57 507 36 480 3.76e-66 223
Msa0182840 MtrunA17_Chr6g0463791 29.878 492 301 14 45 517 17 483 6.47e-66 222
Msa0182840 MtrunA17_Chr3g0101671 29.249 506 327 11 44 534 14 503 7.28e-66 222
Msa0182840 MtrunA17_Chr3g0101711 29.563 504 308 12 40 517 6 488 8.55e-66 222
Msa0182840 MtrunA17_Chr4g0058191 29.303 488 324 12 40 522 5 476 1.44e-65 221
Msa0182840 MtrunA17_Chr4g0052851 31.441 458 278 11 64 514 34 462 2.73e-65 220
Msa0182840 MtrunA17_Chr5g0445531 28.145 469 298 11 64 517 39 483 2.86e-65 220
Msa0182840 MtrunA17_Chr6g0463801 29.067 461 305 7 64 518 38 482 4.01e-65 220
Msa0182840 MtrunA17_Chr5g0395321 29.211 469 311 7 43 509 21 470 4.37e-65 221
Msa0182840 MtrunA17_Chr4g0035921 30.595 487 301 11 43 509 17 486 5.36e-65 220
Msa0182840 MtrunA17_Chr4g0030701 30.595 487 304 14 54 517 26 501 6.14e-65 220
Msa0182840 MtrunA17_Chr4g0011921 31.328 482 297 10 37 507 9 467 6.33e-65 219
Msa0182840 MtrunA17_Chr4g0058201 29.661 472 309 11 55 517 20 477 6.93e-65 219
Msa0182840 MtrunA17_Chr5g0401681 29.713 488 317 10 37 517 6 474 7.44e-65 219
Msa0182840 MtrunA17_Chr3g0086661 31.078 473 305 11 72 533 41 503 8.81e-65 219
Msa0182840 MtrunA17_Chr4g0024771 30.000 470 293 14 62 517 37 484 8.95e-65 219
Msa0182840 MtrunA17_Chr8g0344151 31.441 458 296 10 58 509 32 477 1.18e-64 219
Msa0182840 MtrunA17_Chr1g0174441 31.013 474 297 13 58 515 49 508 1.70e-64 219
Msa0182840 MtrunA17_Chr5g0446161 28.074 488 331 8 50 534 28 498 2.06e-64 218
Msa0182840 MtrunA17_Chr3g0101701 30.426 470 292 12 64 517 39 489 2.47e-64 218
Msa0182840 MtrunA17_Chr1g0198191 28.778 483 316 13 46 515 30 497 2.65e-64 218
Msa0182840 MtrunA17_Chr4g0057001 30.769 481 310 11 44 517 33 497 2.65e-64 218
Msa0182840 MtrunA17_Chr4g0076161 30.118 508 303 13 36 517 6 487 3.63e-64 217
Msa0182840 MtrunA17_Chr3g0101691 29.851 469 296 11 64 517 39 489 3.69e-64 217
Msa0182840 MtrunA17_Chr4g0052861 29.796 490 316 11 36 517 5 474 5.34e-64 217
Msa0182840 MtrunA17_Chr3g0101631 29.175 497 323 12 33 517 1 480 8.81e-64 216
Msa0182840 MtrunA17_Chr2g0296661 32.809 445 269 11 85 517 53 479 1.22e-63 216
Msa0182840 MtrunA17_Chr3g0101661 29.607 483 311 9 64 535 39 503 2.78e-63 215
Msa0182840 MtrunA17_Chr8g0372251 30.723 498 304 16 55 533 27 502 4.04e-63 214
Msa0182840 MtrunA17_Chr3g0101651 29.851 469 296 11 64 517 39 489 9.17e-63 214
Msa0182840 MtrunA17_Chr3g0086651 31.304 460 292 12 72 517 41 490 1.24e-62 213
Msa0182840 MtrunA17_Chr6g0484841 30.498 482 299 14 52 517 27 488 1.34e-62 213
Msa0182840 MtrunA17_Chr5g0446151 28.542 487 324 9 55 534 30 499 1.42e-62 213
Msa0182840 MtrunA17_Chr3g0101621 29.752 484 309 12 46 517 11 475 2.50e-62 212
Msa0182840 MtrunA17_Chr5g0395331 29.350 477 305 9 46 509 20 477 2.93e-62 212
Msa0182840 MtrunA17_Chr7g0254641 30.786 471 309 10 59 517 33 498 2.95e-62 213
Msa0182840 MtrunA17_Chr5g0430131 31.070 486 302 13 46 517 21 487 3.62e-62 212
Msa0182840 MtrunA17_Chr3g0094231 29.915 468 293 11 64 517 37 483 4.58e-62 212
Msa0182840 MtrunA17_Chr4g0020041 29.025 472 294 12 64 517 38 486 5.70e-62 211
Msa0182840 MtrunA17_Chr8g0344181 30.044 456 302 10 60 509 35 479 6.00e-62 211
Msa0182840 MtrunA17_Chr4g0011961 30.105 475 303 10 43 508 13 467 1.29e-61 210
Msa0182840 MtrunA17_Chr8g0390881 29.730 481 299 15 64 526 37 496 1.55e-61 210
Msa0182840 MtrunA17_Chr4g0053621 30.020 493 309 12 37 517 10 478 1.79e-61 210
Msa0182840 MtrunA17_Chr5g0431671 27.122 483 318 12 64 534 39 499 1.82e-61 210
Msa0182840 MtrunA17_Chr1g0174461 29.810 473 305 13 58 517 30 488 1.48e-60 208
Msa0182840 MtrunA17_Chr3g0101761 28.738 515 326 13 42 534 9 504 1.88e-60 207
Msa0182840 MtrunA17_Chr3g0101821 30.724 511 314 14 42 533 9 498 2.28e-60 207
Msa0182840 MtrunA17_Chr7g0246221 29.032 496 312 12 46 523 17 490 4.41e-60 206
Msa0182840 MtrunA17_Chr5g0430031 29.376 497 311 15 46 526 24 496 4.87e-60 206
Msa0182840 MtrunA17_Chr5g0419691 30.670 463 277 12 64 507 30 467 5.44e-60 206
Msa0182840 MtrunA17_Chr5g0431511 28.261 460 298 10 64 509 34 475 9.12e-60 206
Msa0182840 MtrunA17_Chr4g0017411 29.978 457 286 10 64 514 31 459 1.08e-59 205
Msa0182840 MtrunA17_Chr8g0344191 28.138 494 337 10 21 509 31 511 1.08e-59 206
Msa0182840 MtrunA17_Chr4g0061381 29.916 478 302 13 72 533 40 500 1.11e-59 205
Msa0182840 MtrunA17_Chr7g0265611 28.602 472 306 9 44 501 28 482 2.04e-59 205
Msa0182840 MtrunA17_Chr1g0207841 30.349 458 285 11 83 517 57 503 2.11e-59 205
Msa0182840 MtrunA17_Chr3g0084921 28.992 476 318 11 58 521 30 497 2.48e-59 204
Msa0182840 MtrunA17_Chr3g0101751 30.041 486 310 11 64 535 43 512 2.86e-59 204
Msa0182840 MtrunA17_Chr5g0430101 29.652 489 310 14 43 517 17 485 5.77e-59 203
Msa0182840 MtrunA17_Chr4g0030711 29.540 457 292 11 83 517 56 504 6.84e-59 204
Msa0182840 MtrunA17_Chr8g0339331 28.631 482 325 10 48 517 23 497 8.41e-59 203
Msa0182840 MtrunA17_Chr5g0430091 31.006 487 295 17 57 526 34 496 8.56e-59 203
Msa0182840 MtrunA17_Chr1g0174451 28.717 491 325 11 43 517 8 489 1.19e-58 202
Msa0182840 MtrunA17_Chr5g0431501 27.813 471 310 10 64 521 34 487 1.25e-58 202
Msa0182840 MtrunA17_Chr5g0431461 27.813 471 310 10 64 521 34 487 1.25e-58 202
Msa0182840 MtrunA17_Chr1g0156101 28.270 474 302 11 56 507 25 482 1.39e-58 202
Msa0182840 MtrunA17_Chr5g0430081 29.365 504 314 16 36 517 3 486 1.54e-58 202
Msa0182840 MtrunA17_Chr3g0101801 28.261 506 334 9 41 535 20 507 1.77e-58 202
Msa0182840 MtrunA17_Chr7g0246151 28.571 490 322 10 39 517 14 486 2.33e-58 202
Msa0182840 MtrunA17_Chr7g0258221 29.839 496 311 15 44 517 8 488 2.41e-58 202
Msa0182840 MtrunA17_Chr4g0039391 31.746 441 280 11 85 517 56 483 3.02e-58 201
Msa0182840 MtrunA17_Chr2g0280261 30.735 449 288 7 64 507 35 465 4.84e-58 201
Msa0182840 MtrunA17_Chr5g0395381 27.292 469 295 7 43 509 21 445 5.39e-58 200
Msa0182840 MtrunA17_Chr4g0052881 30.277 469 300 11 57 517 26 475 7.78e-58 200
Msa0182840 MtrunA17_Chr7g0218611 30.435 483 303 15 60 526 27 492 9.78e-58 200
Msa0182840 MtrunA17_Chr4g0056951 30.979 439 286 9 85 517 65 492 1.06e-57 200
Msa0182840 MtrunA17_Chr4g0058261 27.935 494 326 12 55 534 54 531 1.08e-57 201
Msa0182840 MtrunA17_Chr7g0246121 30.787 445 283 10 74 509 45 473 1.09e-57 200
Msa0182840 MtrunA17_Chr4g0039901 28.059 474 316 10 64 529 36 492 1.18e-57 200
Msa0182840 MtrunA17_Chr7g0224551 28.953 487 299 14 58 517 26 492 1.22e-57 200
Msa0182840 MtrunA17_Chr7g0218601 26.869 495 331 14 45 526 15 491 1.67e-57 199
Msa0182840 MtrunA17_Chr1g0160851 28.435 524 327 15 28 534 3 495 2.66e-57 199
Msa0182840 MtrunA17_Chr7g0224561 29.448 489 296 15 56 517 26 492 2.78e-57 199
Msa0182840 MtrunA17_Chr7g0246131 29.940 501 318 13 37 523 10 491 3.64e-57 199
Msa0182840 MtrunA17_Chr8g0357421 28.310 491 310 10 64 535 38 505 4.38e-57 198
Msa0182840 MtrunA17_Chr3g0101831 28.713 505 325 12 44 533 15 499 5.50e-57 198
Msa0182840 MtrunA17_Chr1g0162801 30.149 471 291 11 64 517 38 487 5.67e-57 198
Msa0182840 MtrunA17_Chr4g0011871 29.630 459 288 10 64 507 30 468 1.06e-56 197
Msa0182840 MtrunA17_Chr6g0451691 27.059 510 336 11 34 517 11 510 2.96e-56 197
Msa0182840 MtrunA17_Chr1g0174481 27.837 467 314 10 58 515 29 481 3.01e-56 196
Msa0182840 MtrunA17_Chr4g0011981 30.131 458 286 11 64 507 30 467 3.66e-56 196
Msa0182840 MtrunA17_Chr1g0213671 28.753 473 302 13 64 517 35 491 4.57e-56 196
Msa0182840 MtrunA17_Chr7g0235551 29.211 469 303 13 64 516 35 490 7.28e-56 195
Msa0182840 MtrunA17_Chr1g0174471 27.061 473 321 10 55 515 42 502 7.96e-56 196
Msa0182840 MtrunA17_Chr8g0357431 27.528 534 343 12 18 535 1 506 3.05e-55 193
Msa0182840 MtrunA17_Chr5g0406651 30.271 479 298 13 64 526 31 489 3.32e-55 193
Msa0182840 MtrunA17_Chr2g0296651 27.767 497 313 12 37 515 4 472 4.85e-55 192
Msa0182840 MtrunA17_Chr1g0176831 26.819 481 320 11 43 509 38 500 1.85e-54 191
Msa0182840 MtrunA17_Chr6g0451751 26.148 501 348 11 34 517 11 506 2.52e-54 191
Msa0182840 MtrunA17_Chr6g0451741 26.719 509 339 10 34 518 31 529 3.57e-54 191
Msa0182840 MtrunA17_Chr1g0200961 30.398 477 297 12 58 517 23 481 6.81e-54 189
Msa0182840 MtrunA17_Chr8g0351801 27.790 457 297 10 85 517 55 502 1.20e-52 187
Msa0182840 MtrunA17_Chr5g0430111 30.332 422 263 14 46 452 21 426 1.40e-52 184
Msa0182840 MtrunA17_Chr2g0314731 26.250 480 327 12 43 509 5 470 2.31e-52 185
Msa0182840 MtrunA17_Chr1g0167321 28.690 481 304 10 56 517 24 484 5.39e-52 184
Msa0182840 MtrunA17_Chr1g0205361 26.121 513 353 11 28 534 3 495 1.20e-51 184
Msa0182840 MtrunA17_Chr6g0458561 27.647 510 336 14 29 517 13 510 1.54e-51 184
Msa0182840 MtrunA17_Chr4g0011881 28.000 500 320 13 42 526 14 488 1.91e-51 183
Msa0182840 MtrunA17_Chr6g0451641 26.181 508 331 14 35 517 11 499 2.92e-51 183
Msa0182840 MtrunA17_Chr8g0362701 28.311 438 300 8 85 515 56 486 3.28e-51 182
Msa0182840 MtrunA17_Chr1g0156081 28.481 474 301 11 56 507 49 506 7.89e-51 182
Msa0182840 MtrunA17_Chr2g0314721 26.582 474 324 10 43 507 21 479 9.54e-51 181
Msa0182840 MtrunA17_Chr4g0074581 27.837 467 303 14 53 501 60 510 1.06e-50 182
Msa0182840 MtrunA17_Chr6g0466901 26.931 505 328 12 34 513 7 495 1.09e-50 181
Msa0182840 MtrunA17_Chr1g0164211 26.653 484 319 12 64 534 32 492 1.13e-50 181
Msa0182840 MtrunA17_Chr1g0197851 27.010 485 326 14 28 506 3 465 3.71e-50 179
Msa0182840 MtrunA17_Chr4g0046331 27.713 516 316 16 37 517 5 498 5.82e-50 179
Msa0182840 MtrunA17_Chr1g0197881 26.987 478 325 12 34 506 6 464 7.06e-50 179
Msa0182840 MtrunA17_Chr1g0205371 28.310 491 322 11 37 517 12 482 1.20e-49 178
Msa0182840 MtrunA17_Chr6g0451781 28.106 491 307 11 57 517 65 539 1.50e-49 179
Msa0182840 MtrunA17_Chr3g0101741 26.698 427 281 10 101 517 3 407 3.21e-49 175
Msa0182840 MtrunA17_Chr5g0419451 27.673 477 313 16 47 514 45 498 5.91e-49 177
Msa0182840 MtrunA17_Chr8g0362481 28.205 429 284 11 101 517 3 419 1.48e-48 174
Msa0182840 MtrunA17_Chr1g0197891 27.009 448 305 11 64 506 35 465 2.89e-48 174
Msa0182840 MtrunA17_Chr8g0339311 27.439 492 333 14 57 533 38 520 4.21e-48 174
Msa0182840 MtrunA17_Chr6g0466941 27.634 503 328 14 34 513 7 496 5.02e-48 174
Msa0182840 MtrunA17_Chr4g0046631 25.586 469 324 9 62 517 45 501 5.71e-48 174
Msa0182840 MtrunA17_Chr3g0082701 26.769 523 346 13 27 526 3 511 6.99e-48 174
Msa0182840 MtrunA17_Chr7g0258211 27.706 462 315 11 72 524 48 499 8.45e-48 173
Msa0182840 MtrunA17_Chr1g0200951 27.214 463 306 13 66 514 64 509 1.56e-47 173
Msa0182840 MtrunA17_Chr7g0246181 30.390 487 300 13 37 507 10 473 2.61e-47 172
Msa0182840 MtrunA17_Chr1g0156061 28.446 457 264 8 52 507 44 438 2.66e-47 171
Msa0182840 MtrunA17_Chr5g0413911 27.743 483 309 13 60 514 39 509 2.84e-46 169
Msa0182840 MtrunA17_Chr2g0304871 26.506 498 344 12 32 517 10 497 4.55e-46 169
Msa0182840 MtrunA17_Chr4g0008101 24.400 500 342 10 43 517 18 506 9.93e-46 168
Msa0182840 MtrunA17_Chr4g0046351 27.328 494 309 15 53 517 24 496 1.57e-45 167
Msa0182840 MtrunA17_Chr4g0046321 26.721 494 312 15 53 517 24 496 1.57e-45 167
Msa0182840 MtrunA17_Chr8g0346261 27.664 488 305 17 65 533 86 544 2.48e-45 167
Msa0182840 MtrunA17_Chr1g0197871 26.739 460 291 15 64 506 35 465 2.67e-45 166
Msa0182840 MtrunA17_Chr2g0334021 25.420 476 316 10 57 516 30 482 8.29e-44 162
Msa0182840 MtrunA17_Chr8g0364651 26.844 488 328 13 43 515 7 480 1.79e-43 161
Msa0182840 MtrunA17_Chr2g0310351 41.624 197 104 5 334 526 3 192 2.85e-43 152
Msa0182840 MtrunA17_Chr3g0107541 25.618 445 307 12 91 521 80 514 4.53e-43 160
Msa0182840 MtrunA17_Chr2g0280121 27.004 474 316 11 76 533 49 508 4.62e-43 160
Msa0182840 MtrunA17_Chr5g0409051 24.131 489 345 12 44 515 11 490 1.07e-42 159
Msa0182840 MtrunA17_Chr8g0370641 26.243 503 338 17 33 514 10 500 4.03e-42 158
Msa0182840 MtrunA17_Chr3g0107611 25.591 465 320 13 59 505 46 502 4.78e-42 158
Msa0182840 MtrunA17_Chr4g0058211 38.119 202 116 6 323 522 10 204 1.03e-41 149
Msa0182840 MtrunA17_Chr8g0377341 26.606 545 337 20 2 525 14 516 1.04e-41 157
Msa0182840 MtrunA17_Chr2g0280071 27.049 488 322 13 64 533 64 535 2.50e-41 158
Msa0182840 MtrunA17_Chr2g0280081 27.112 509 335 12 37 525 503 995 2.67e-41 159
Msa0182840 MtrunA17_Chr2g0280081 26.350 463 312 9 75 522 44 492 4.95e-36 143
Msa0182840 MtrunA17_Chr8g0370651 25.285 526 336 17 28 517 3 507 1.13e-39 151
Msa0182840 MtrunA17_Chr1g0160861 31.525 295 171 6 253 534 60 336 2.18e-39 146
Msa0182840 MtrunA17_Chr3g0101591 37.895 190 111 2 335 523 42 225 2.83e-38 140
Msa0182840 MtrunA17_Chr1g0174431 38.710 186 111 3 334 517 3 187 3.10e-37 137
Msa0182840 MtrunA17_Chr5g0431591 30.415 217 144 2 320 535 107 317 1.24e-35 135
Msa0182840 MtrunA17_Chr4g0011851 36.893 206 121 5 324 526 8 207 1.47e-35 132
Msa0182840 MtrunA17_Chr2g0280041 25.910 467 304 13 88 533 89 534 8.14e-35 137
Msa0182840 MtrunA17_Chr4g0046681 34.054 185 117 3 334 517 33 213 3.48e-34 129
Msa0182840 MtrunA17_Chr8g0387101 26.407 462 309 10 88 533 59 505 4.24e-34 135
Msa0182840 MtrunA17_Chr2g0314781 36.810 163 96 2 348 509 1 157 1.74e-33 125
Msa0182840 MtrunA17_Chr4g0011941 38.286 175 101 3 334 507 3 171 4.65e-33 125
Msa0182840 MtrunA17_Chr8g0364631 25.690 471 316 13 64 515 33 488 1.19e-32 130
Msa0182840 MtrunA17_Chr5g0430071 29.283 321 198 10 211 517 36 341 5.11e-32 126
Msa0182840 MtrunA17_Chr6g0463621 35.602 191 110 6 334 517 3 187 9.94e-32 121
Msa0182840 MtrunA17_Chr8g0390871 34.450 209 116 6 323 517 9 210 1.18e-31 122
Msa0182840 MtrunA17_Chr5g0446101 28.483 323 195 12 211 520 1 300 1.25e-31 124
Msa0182840 MtrunA17_Chr2g0280011 36.098 205 120 4 335 533 11 210 3.66e-31 120
Msa0182840 MtrunA17_Chr5g0402981 32.044 181 117 3 343 521 3 179 1.93e-30 117
Msa0182840 MtrunA17_Chr5g0445351 36.420 162 93 3 360 517 52 207 3.13e-30 117
Msa0182840 MtrunA17_Chr5g0423621 34.254 181 108 4 348 525 1 173 3.21e-30 116
Msa0182840 MtrunA17_Chr6g0451811 31.937 191 125 2 328 517 1 187 4.94e-29 114
Msa0182840 MtrunA17_Chr2g0280061 35.122 205 122 4 335 533 11 210 2.36e-28 112
Msa0182840 MtrunA17_Chr6g0451771 31.937 191 125 3 328 517 18 204 5.66e-28 111
Msa0182840 MtrunA17_Chr4g0046661 35.165 182 113 3 334 514 27 204 7.13e-28 111
Msa0182840 MtrunA17_Chr4g0046701 36.111 144 88 1 374 517 2 141 1.61e-27 108
Msa0182840 MtrunA17_Chr5g0445371 29.630 216 116 4 320 535 50 229 6.02e-27 109
Msa0182840 MtrunA17_Chr6g0463611 25.697 323 203 9 23 329 7 308 6.37e-27 111
Msa0182840 MtrunA17_Chr6g0451681 32.418 182 118 3 334 514 279 456 1.61e-26 112
Msa0182840 MtrunA17_Chr6g0451681 32.075 159 103 4 35 191 35 190 6.04e-16 80.5
Msa0182840 MtrunA17_Chr5g0445761 36.872 179 106 3 334 511 3 175 1.73e-25 104
Msa0182840 MtrunA17_Chr3g0105761 33.898 177 109 4 334 508 2 172 2.99e-25 103
Msa0182840 MtrunA17_Chr3g0086681 33.129 163 107 1 371 533 5 165 3.16e-25 102
Msa0182840 MtrunA17_Chr6g0477081 29.630 243 154 6 202 441 13 241 1.16e-24 102
Msa0182840 MtrunA17_Chr3g0116731 38.596 114 60 1 384 497 3 106 2.54e-24 98.6
Msa0182840 MtrunA17_Chr0c19g0493771 23.843 432 278 15 94 502 217 620 4.38e-24 106
Msa0182840 MtrunA17_Chr5g0445361 36.296 135 80 2 401 535 8 136 7.33e-24 97.4
Msa0182840 MtrunA17_Chr5g0396521 24.835 455 284 15 95 504 103 544 1.93e-23 103
Msa0182840 MtrunA17_Chr3g0107551 28.061 196 136 3 328 521 1 193 2.47e-23 98.2
Msa0182840 MtrunA17_Chr1g0179811 24.198 405 276 11 95 486 108 494 6.49e-23 102
Msa0182840 MtrunA17_Chr3g0117301 36.885 122 71 2 382 503 1 116 1.55e-22 93.2
Msa0182840 MtrunA17_Chr5g0445751 28.488 172 120 2 59 230 40 208 3.19e-22 97.4
Msa0182840 MtrunA17_Chr3g0101541 37.405 131 76 1 379 509 1 125 5.42e-22 92.0
Msa0182840 MtrunA17_Chr5g0430151 37.324 142 81 3 361 500 4 139 1.64e-21 92.0
Msa0182840 MtrunA17_Chr5g0445411 31.783 129 87 1 64 191 46 174 3.98e-21 90.9
Msa0182840 MtrunA17_Chr3g0117321 36.441 118 74 1 65 182 9 125 4.10e-21 89.4
Msa0182840 MtrunA17_Chr4g0076171 32.184 174 93 4 348 517 1 153 4.34e-21 90.5
Msa0182840 MtrunA17_Chr5g0430041 36.000 150 86 3 357 505 4 144 5.51e-21 90.5
Msa0182840 MtrunA17_Chr7g0262111 24.846 487 280 15 58 503 36 477 8.16e-21 95.9
Msa0182840 MtrunA17_Chr1g0204271 22.588 456 296 16 85 510 56 484 8.28e-21 95.9
Msa0182840 MtrunA17_Chr5g0430171 29.808 208 132 5 58 264 35 229 9.04e-21 91.3
Msa0182840 MtrunA17_Chr1g0203141 22.299 435 302 13 81 503 77 487 1.04e-20 95.5
Msa0182840 MtrunA17_Chr2g0313831 24.057 424 276 12 77 481 70 466 4.99e-20 93.2
Msa0182840 MtrunA17_Chr1g0174421 24.916 297 203 7 37 325 25 309 5.95e-20 91.3
Msa0182840 MtrunA17_Chr4g0011861 30.303 165 114 1 64 228 30 193 8.65e-20 90.1
Msa0182840 MtrunA17_Chr5g0431631 29.221 154 108 1 21 173 8 161 1.08e-19 86.3
Msa0182840 MtrunA17_Chr5g0444981 34.940 166 100 3 342 506 21 179 2.19e-19 87.0
Msa0182840 MtrunA17_Chr8g0372591 32.540 126 84 1 331 455 2 127 1.20e-18 82.8
Msa0182840 MtrunA17_Chr7g0215181 24.251 367 246 11 140 500 138 478 1.87e-18 88.6
Msa0182840 MtrunA17_Chr2g0310371 34.677 124 80 1 56 179 21 143 2.10e-18 82.0
Msa0182840 MtrunA17_Chr3g0128461 22.782 417 292 13 93 500 98 493 2.42e-18 88.2
Msa0182840 MtrunA17_Chr4g0028321 34.677 124 76 2 400 523 26 144 2.67e-18 82.4
Msa0182840 MtrunA17_Chr4g0030761 35.246 122 60 4 382 503 1 103 1.61e-17 79.7
Msa0182840 MtrunA17_Chr2g0288661 23.756 442 292 17 77 500 73 487 4.11e-17 84.3
Msa0182840 MtrunA17_Chr1g0151221 21.192 453 304 15 65 481 41 476 4.54e-17 84.3
Msa0182840 MtrunA17_Chr1g0203151 22.398 442 276 15 88 503 83 483 9.41e-17 83.2
Msa0182840 MtrunA17_Chr4g0011931 26.217 267 169 9 31 289 3 249 1.29e-16 80.5
Msa0182840 MtrunA17_Chr3g0135841 21.535 469 288 15 65 481 44 484 5.79e-16 80.9
Msa0182840 MtrunA17_Chr2g0308651 24.051 395 259 13 134 506 16 391 6.32e-16 80.1
Msa0182840 MtrunA17_Chr4g0030741 25.172 290 177 9 83 355 83 349 6.96e-16 79.3
Msa0182840 MtrunA17_Chr4g0046691 23.552 259 187 5 63 318 39 289 9.61e-16 78.2
Msa0182840 MtrunA17_Chr6g0479681 25.641 234 149 6 288 503 275 501 1.86e-15 79.3
Msa0182840 MtrunA17_Chr8g0362731 23.902 410 260 16 110 500 1 377 2.30e-15 78.2
Msa0182840 MtrunA17_Chr5g0446131 24.069 403 266 14 93 481 88 464 2.88e-15 78.6
Msa0182840 MtrunA17_Chr8g0351391 23.192 401 262 13 146 523 123 500 6.90e-15 77.4
Msa0182840 MtrunA17_Chr6g0472221 22.093 430 292 12 89 503 97 498 1.07e-14 76.6
Msa0182840 MtrunA17_Chr2g0286091 32.370 173 104 6 335 503 308 471 1.77e-14 75.9
Msa0182840 MtrunA17_Chr2g0313821 22.066 426 282 11 77 481 70 466 3.62e-14 75.1
Msa0182840 MtrunA17_Chr8g0354531 28.079 203 133 5 334 534 454 645 4.13e-14 75.1
Msa0182840 MtrunA17_Chr2g0307291 24.586 423 277 15 93 500 92 487 4.33e-14 74.7
Msa0182840 MtrunA17_Chr5g0431601 35.802 81 51 1 101 181 3 82 5.67e-14 67.4
Msa0182840 MtrunA17_Chr8g0351311 22.294 462 311 14 85 523 65 501 6.45e-14 74.3
Msa0182840 MtrunA17_Chr6g0451801 23.984 246 166 5 34 264 11 250 1.08e-13 72.4
Msa0182840 MtrunA17_Chr4g0056981 48.571 70 35 1 360 428 3 72 1.19e-13 66.2
Msa0182840 MtrunA17_Chr8g0381541 21.075 465 302 18 64 506 44 465 1.26e-13 73.2
Msa0182840 MtrunA17_Chr8g0354571 29.557 203 130 7 334 534 333 524 1.29e-13 73.2
Msa0182840 MtrunA17_Chr8g0381571 21.622 444 283 18 64 485 44 444 1.65e-13 72.8
Msa0182840 MtrunA17_Chr6g0457421 22.222 441 289 14 79 500 71 476 2.75e-13 72.4
Msa0182840 MtrunA17_Chr1g0207851 24.510 204 146 5 83 284 57 254 3.17e-13 71.2
Msa0182840 MtrunA17_Chr5g0402971 21.549 297 213 7 54 338 31 319 3.60e-13 70.5
Msa0182840 MtrunA17_Chr5g0397971 22.360 483 300 20 64 515 32 470 4.65e-13 71.6
Msa0182840 MtrunA17_Chr2g0293411 28.251 223 142 6 289 506 254 463 9.51e-13 70.5
Msa0182840 MtrunA17_Chr2g0307301 21.875 416 297 8 93 500 92 487 1.74e-12 69.7
Msa0182840 MtrunA17_Chr5g0445341 32.500 80 53 1 101 179 3 82 1.92e-12 63.2
Msa0182840 MtrunA17_Chr2g0313801 21.727 359 253 10 153 500 144 485 2.74e-12 69.3
Msa0182840 MtrunA17_Chr2g0313791 21.622 444 301 15 77 503 70 483 2.98e-12 68.9
Msa0182840 MtrunA17_Chr8g0351441 23.866 419 272 19 129 523 103 498 5.24e-12 68.2
Msa0182840 MtrunA17_Chr6g0484771 28.099 121 86 1 101 221 3 122 5.73e-12 63.5
Msa0182840 MtrunA17_Chr3g0089361 26.715 277 173 8 255 514 200 463 7.68e-12 67.8
Msa0182840 MtrunA17_Chr8g0354541 26.087 184 123 5 351 532 4 176 8.00e-12 63.9
Msa0182840 MtrunA17_Chr7g0260821 21.903 452 318 18 67 502 40 472 1.13e-11 67.0
Msa0182840 MtrunA17_Chr7g0248991 22.156 334 217 12 136 449 41 351 1.20e-11 66.6
Msa0182840 MtrunA17_Chr4g0014051 23.913 460 296 20 61 503 78 500 1.42e-11 67.0
Msa0182840 MtrunA17_Chr8g0380931 28.431 204 123 6 308 501 286 476 2.59e-11 65.9
Msa0182840 MtrunA17_Chr2g0313751 24.122 427 271 19 77 481 98 493 2.66e-11 66.2
Msa0182840 MtrunA17_Chr2g0313761 28.571 182 122 4 320 500 306 480 2.99e-11 65.9
Msa0182840 MtrunA17_Chr5g0430051 35.965 114 59 5 22 133 6 107 4.13e-11 60.5
Msa0182840 MtrunA17_Chr1g0163211 24.889 225 148 8 289 507 268 477 4.51e-11 65.1
Msa0182840 MtrunA17_Chr8g0383801 50.000 52 22 1 438 489 8 55 6.08e-11 59.3
Msa0182840 MtrunA17_Chr3g0107561 21.986 282 185 9 1 274 8 262 7.06e-11 63.9
Msa0182840 MtrunA17_Chr8g0372331 30.631 111 73 2 408 517 1 108 7.35e-11 60.1
Msa0182840 MtrunA17_Chr7g0226771 22.766 470 314 12 44 503 14 444 9.02e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182840 AT2G30490.1 66.094 466 151 4 73 535 43 504 0.0 647
Msa0182840 AT4G22710.1 32.895 456 280 11 72 517 62 501 2.88e-74 245
Msa0182840 AT4G22690.1 32.675 456 281 11 72 517 93 532 9.53e-74 244
Msa0182840 AT2G40890.1 32.035 462 296 7 64 517 28 479 2.22e-73 242
Msa0182840 AT5G07990.1 30.273 512 332 14 32 533 3 499 5.55e-72 238
Msa0182840 AT1G74550.1 31.056 483 301 10 43 517 6 464 7.19e-71 235
Msa0182840 AT3G26280.1 31.697 489 302 11 42 516 14 484 2.90e-70 234
Msa0182840 AT3G26280.2 31.697 489 302 11 42 516 31 501 3.45e-70 234
Msa0182840 AT3G48280.1 29.289 478 301 14 57 522 24 476 7.47e-68 227
Msa0182840 AT4G12300.1 32.258 465 293 11 62 517 41 492 9.99e-68 227
Msa0182840 AT3G48290.1 30.947 475 283 13 59 517 29 474 1.25e-67 226
Msa0182840 AT4G12320.1 30.803 461 303 8 64 517 43 494 2.07e-67 226
Msa0182840 AT5G67310.1 31.677 483 292 17 47 517 27 483 9.28e-67 224
Msa0182840 AT4G36220.1 30.642 483 292 13 71 531 48 509 2.07e-66 224
Msa0182840 AT4G13290.1 30.303 462 293 10 64 517 34 474 7.20e-65 219
Msa0182840 AT4G37410.1 29.960 494 299 13 42 517 9 473 7.54e-65 219
Msa0182840 AT5G36220.1 29.959 484 307 10 45 517 16 478 1.06e-64 219
Msa0182840 AT3G26270.1 30.105 475 303 10 60 521 29 487 1.16e-64 219
Msa0182840 AT4G37310.1 28.834 489 314 12 43 517 16 484 1.87e-64 219
Msa0182840 AT4G13310.1 30.258 466 296 10 64 517 33 481 6.56e-64 217
Msa0182840 AT3G48270.1 29.956 454 284 12 59 503 27 455 9.19e-64 216
Msa0182840 AT2G30770.1 29.247 465 300 14 64 517 34 480 2.18e-63 215
Msa0182840 AT3G25180.1 28.711 512 319 14 28 517 3 490 4.80e-63 215
Msa0182840 AT3G48290.2 30.595 487 295 10 59 517 29 500 6.09e-63 214
Msa0182840 AT4G12310.1 30.837 454 296 9 72 517 53 496 6.80e-63 214
Msa0182840 AT1G74540.1 32.409 469 284 12 60 517 24 470 8.44e-63 214
Msa0182840 AT1G13080.1 31.106 479 294 13 56 516 24 484 1.03e-62 214
Msa0182840 AT3G48310.1 28.105 459 290 12 59 505 28 458 1.75e-62 213
Msa0182840 AT5G10600.1 30.617 454 295 8 64 512 47 485 2.81e-62 213
Msa0182840 AT4G37340.1 29.741 464 294 13 64 517 31 472 2.35e-61 210
Msa0182840 AT5G04630.1 28.921 491 319 14 40 515 15 490 5.12e-61 209
Msa0182840 AT3G26300.1 28.243 478 316 10 43 511 13 472 8.43e-61 209
Msa0182840 AT4G13770.1 28.455 492 312 12 36 511 7 474 1.13e-60 208
Msa0182840 AT1G13110.1 27.746 519 340 13 32 534 2 501 1.23e-60 208
Msa0182840 AT5G10610.1 30.416 457 290 11 64 512 33 469 2.33e-60 207
Msa0182840 AT3G26230.1 29.817 493 312 12 43 516 3 480 4.25e-60 207
Msa0182840 AT1G13090.2 29.412 476 304 12 64 525 29 486 4.42e-60 206
Msa0182840 AT3G26180.1 28.797 507 315 13 33 516 1 484 6.67e-60 206
Msa0182840 AT5G04330.1 30.426 470 297 13 64 517 33 488 3.38e-59 204
Msa0182840 AT4G37320.1 28.195 493 309 13 43 517 7 472 4.79e-59 204
Msa0182840 AT3G26170.1 27.944 501 327 13 33 516 1 484 8.18e-59 203
Msa0182840 AT2G45560.1 28.400 500 331 13 43 525 9 498 8.41e-59 203
Msa0182840 AT5G06900.1 29.646 452 300 9 64 511 35 472 9.40e-59 203
Msa0182840 AT4G37330.1 29.114 474 298 12 55 517 23 469 1.05e-58 202
Msa0182840 AT2G23220.1 30.870 460 287 10 64 514 47 484 1.47e-58 203
Msa0182840 AT3G48300.1 28.043 460 300 11 65 517 31 466 2.15e-58 202
Msa0182840 AT3G48300.2 28.043 460 300 11 65 517 33 468 2.24e-58 202
Msa0182840 AT3G26210.1 28.540 459 301 11 72 517 40 484 2.72e-58 202
Msa0182840 AT4G37370.1 28.367 490 304 14 43 517 13 470 4.79e-58 201
Msa0182840 AT5G25130.1 29.787 470 300 12 60 517 26 477 8.71e-58 200
Msa0182840 AT3G26160.1 29.122 467 304 10 64 516 31 484 1.06e-57 200
Msa0182840 AT3G52970.1 27.049 488 335 7 44 517 17 497 1.18e-57 201
Msa0182840 AT3G26150.1 28.515 505 319 14 33 516 1 484 1.50e-57 200
Msa0182840 AT2G23190.1 29.124 491 319 8 33 515 45 514 2.21e-57 200
Msa0182840 AT5G57260.1 28.879 464 295 12 64 511 31 475 2.90e-57 199
Msa0182840 AT5G25120.1 29.713 488 299 15 43 511 6 468 6.68e-57 198
Msa0182840 AT4G37430.1 28.189 486 322 9 42 517 8 476 6.97e-57 198
Msa0182840 AT3G26310.1 29.006 493 310 12 43 517 10 480 9.21e-57 197
Msa0182840 AT3G26320.1 28.195 493 308 15 45 517 15 481 1.64e-56 197
Msa0182840 AT2G30750.1 29.060 468 297 12 64 517 34 480 2.45e-56 196
Msa0182840 AT1G11610.1 26.749 486 324 12 59 533 29 493 2.56e-56 196
Msa0182840 AT3G48320.1 28.088 502 312 13 34 517 3 473 3.07e-56 196
Msa0182840 AT1G11610.2 27.234 470 313 11 59 517 29 480 4.16e-56 196
Msa0182840 AT3G26330.1 28.085 470 302 12 64 517 32 481 7.48e-56 195
Msa0182840 AT3G52970.2 26.494 502 334 8 44 517 17 511 8.26e-56 196
Msa0182840 AT4G37400.1 29.909 438 286 9 85 517 52 473 1.37e-55 194
Msa0182840 AT5G24950.1 27.542 472 308 13 60 517 29 480 2.25e-55 194
Msa0182840 AT3G10560.1 28.067 481 319 14 46 515 30 494 2.78e-55 194
Msa0182840 AT1G33720.1 28.599 514 315 16 37 525 12 498 2.93e-55 194
Msa0182840 AT5G35715.1 29.070 430 282 10 100 517 2 420 3.10e-55 192
Msa0182840 AT3G44250.1 29.462 465 298 11 60 511 25 472 5.68e-55 193
Msa0182840 AT4G31500.1 29.060 468 302 13 55 509 21 471 8.85e-55 192
Msa0182840 AT5G25140.1 27.893 484 313 13 43 511 6 468 1.19e-54 192
Msa0182840 AT2G45550.1 27.944 501 331 15 39 525 14 498 1.33e-54 192
Msa0182840 AT3G28740.1 30.444 473 288 12 59 516 35 481 1.36e-54 192
Msa0182840 AT3G20140.1 26.923 468 321 8 64 525 43 495 2.34e-54 191
Msa0182840 AT5G57220.1 28.074 488 320 10 37 517 4 467 3.17e-54 191
Msa0182840 AT1G13100.1 29.587 436 279 10 90 511 51 472 7.67e-54 189
Msa0182840 AT5G25180.1 26.939 490 303 10 45 511 11 468 1.13e-53 189
Msa0182840 AT3G26190.1 29.263 475 305 12 60 519 25 483 1.24e-53 189
Msa0182840 AT4G37360.1 28.306 484 314 13 43 517 13 472 2.47e-53 188
Msa0182840 AT5G04660.1 26.705 528 356 14 19 533 1 510 4.80e-53 188
Msa0182840 AT3G26200.1 28.392 479 307 9 57 517 22 482 1.12e-52 187
Msa0182840 AT3G26220.1 29.878 492 309 11 42 516 11 483 3.57e-52 185
Msa0182840 AT5G09970.1 30.213 470 284 19 65 514 71 516 8.98e-52 185
Msa0182840 AT2G24180.1 27.813 471 298 14 64 517 37 482 1.65e-51 184
Msa0182840 AT3G53280.1 29.060 468 310 10 60 517 25 480 1.71e-51 183
Msa0182840 AT5G44620.1 27.335 439 303 8 85 517 67 495 2.02e-51 184
Msa0182840 AT3G61040.1 30.081 492 302 20 49 524 21 486 2.63e-51 183
Msa0182840 AT4G15330.1 26.964 471 325 10 65 529 40 497 4.21e-51 183
Msa0182840 AT1G01280.1 28.632 475 282 16 72 517 41 487 6.89e-51 182
Msa0182840 AT3G26830.1 28.033 478 299 12 42 501 12 462 1.92e-50 181
Msa0182840 AT3G20090.2 25.957 470 307 11 74 525 54 500 2.96e-50 181
Msa0182840 AT1G64940.1 27.198 489 325 11 45 515 15 490 6.02e-50 179
Msa0182840 AT3G10570.1 25.850 441 304 10 85 515 67 494 9.47e-50 179
Msa0182840 AT3G53300.1 29.079 478 302 14 64 524 29 486 1.06e-49 179
Msa0182840 AT2G45570.1 28.723 470 302 16 72 525 47 499 1.93e-49 178
Msa0182840 AT4G31940.1 27.921 505 340 11 33 517 1 501 2.54e-49 178
Msa0182840 AT3G26290.1 27.530 494 319 14 57 534 25 495 3.91e-49 177
Msa0182840 AT4G31970.1 28.175 504 339 11 33 517 1 500 5.57e-49 177
Msa0182840 AT1G64930.1 27.004 474 308 12 64 515 33 490 6.10e-49 177
Msa0182840 AT3G26290.2 27.530 494 319 14 57 534 38 508 6.58e-49 177
Msa0182840 AT4G12330.1 26.773 437 307 7 85 517 67 494 9.55e-49 176
Msa0182840 AT3G20110.1 26.667 495 325 12 39 517 9 481 2.38e-48 175
Msa0182840 AT1G74110.1 27.101 476 310 16 59 514 59 517 3.19e-48 175
Msa0182840 AT4G15360.1 26.160 474 323 10 43 503 16 475 3.47e-48 175
Msa0182840 AT3G20940.1 25.880 483 312 10 64 525 43 500 4.90e-48 174
Msa0182840 AT2G42250.1 28.302 477 308 15 64 524 42 500 5.03e-48 174
Msa0182840 AT2G02580.1 29.730 518 321 12 37 534 1 495 5.64e-48 174
Msa0182840 AT2G12190.1 27.331 472 310 12 64 515 33 491 6.31e-48 174
Msa0182840 AT2G45580.1 28.184 479 287 16 74 524 49 498 1.14e-47 173
Msa0182840 AT1G11600.1 26.998 463 314 12 53 501 25 477 1.15e-47 173
Msa0182840 AT5G42590.1 29.132 484 314 13 44 517 17 481 2.44e-47 172
Msa0182840 AT5G24960.1 29.053 475 309 14 54 517 24 481 4.00e-47 171
Msa0182840 AT5G36220.2 33.016 315 185 8 208 517 39 332 6.27e-47 167
Msa0182840 AT1G66540.1 28.684 380 241 10 147 517 1 359 1.16e-46 167
Msa0182840 AT2G14100.1 26.214 515 339 12 26 525 10 498 1.33e-46 171
Msa0182840 AT4G20240.1 28.244 393 261 9 64 448 34 413 5.46e-46 167
Msa0182840 AT5G05260.2 26.907 472 319 13 62 514 39 503 6.60e-46 169
Msa0182840 AT5G06905.1 26.565 527 319 18 45 533 13 509 7.99e-46 168
Msa0182840 AT3G20130.1 26.981 467 292 11 70 514 49 488 1.05e-45 168
Msa0182840 AT1G64950.1 27.542 472 307 12 64 515 33 489 1.56e-45 167
Msa0182840 AT1G13710.1 27.292 480 317 15 36 501 20 481 2.42e-45 167
Msa0182840 AT4G31950.1 27.221 529 332 15 33 533 1 504 3.08e-45 167
Msa0182840 AT5G61320.1 28.889 450 286 11 75 515 45 469 6.34e-45 166
Msa0182840 AT4G13310.2 30.081 369 239 7 64 424 33 390 7.92e-45 163
Msa0182840 AT3G32047.1 27.632 456 294 13 83 524 62 495 8.43e-45 165
Msa0182840 AT5G47990.1 26.039 457 300 11 85 525 64 498 2.10e-44 164
Msa0182840 AT3G20080.2 25.370 473 325 8 64 524 43 499 3.26e-44 164
Msa0182840 AT3G20080.1 25.370 473 325 8 64 524 43 499 3.26e-44 164
Msa0182840 AT2G46660.1 25.786 477 329 13 55 525 62 519 3.94e-44 164
Msa0182840 AT3G03470.1 26.692 517 326 12 23 515 3 490 6.01e-44 163
Msa0182840 AT1G33730.1 32.168 286 177 7 253 530 89 365 7.47e-44 159
Msa0182840 AT1G33730.2 32.168 286 177 7 253 530 89 365 7.47e-44 159
Msa0182840 AT2G25160.1 25.261 479 328 14 58 517 29 496 1.17e-43 162
Msa0182840 AT5G25900.1 24.174 484 330 11 50 516 28 491 2.38e-43 161
Msa0182840 AT3G20120.4 26.049 453 298 12 81 517 59 490 3.02e-43 161
Msa0182840 AT2G27000.1 27.426 474 304 13 70 525 46 497 3.92e-43 161
Msa0182840 AT1G50520.1 27.692 455 285 14 91 525 71 501 5.18e-43 161
Msa0182840 AT3G20950.1 25.306 490 325 14 56 525 35 503 6.41e-43 160
Msa0182840 AT2G22330.1 25.697 502 339 13 33 514 28 515 7.08e-43 160
Msa0182840 AT2G22330.2 25.697 502 339 13 33 514 51 538 9.05e-43 160
Msa0182840 AT1G58260.1 26.395 466 319 12 60 507 34 493 1.00e-42 160
Msa0182840 AT4G39950.1 26.441 503 333 14 33 514 27 513 1.41e-42 160
Msa0182840 AT4G39950.2 26.441 503 333 14 33 514 67 553 3.27e-42 159
Msa0182840 AT1G33720.4 33.451 284 168 10 253 525 93 366 5.24e-42 155
Msa0182840 AT1G33720.3 33.451 284 168 10 253 525 93 366 5.24e-42 155
Msa0182840 AT1G33720.5 33.451 284 168 10 253 525 93 366 5.24e-42 155
Msa0182840 AT1G50560.1 27.876 452 284 13 85 516 65 494 7.14e-42 157
Msa0182840 AT5G05260.1 26.013 469 295 13 62 514 39 471 7.66e-42 157
Msa0182840 AT3G61880.1 25.361 485 322 15 65 533 68 528 3.21e-41 156
Msa0182840 AT4G15350.1 24.123 456 316 9 83 525 55 493 3.26e-41 155
Msa0182840 AT3G61880.2 25.361 485 322 15 65 533 68 528 9.61e-41 155
Msa0182840 AT1G79370.1 25.896 502 323 15 59 525 36 523 1.41e-40 154
Msa0182840 AT1G64900.1 26.362 459 314 10 70 515 38 485 1.70e-40 153
Msa0182840 AT5G42580.1 26.338 467 275 13 85 525 61 484 1.70e-40 153
Msa0182840 AT3G20100.1 25.697 502 340 11 36 525 19 499 2.31e-40 153
Msa0182840 AT4G15330.2 26.539 471 299 15 65 529 40 469 2.51e-40 152
Msa0182840 AT3G20960.2 25.157 477 321 11 70 534 48 500 6.81e-40 152
Msa0182840 AT1G66540.2 30.847 295 179 8 227 517 27 300 8.83e-40 147
Msa0182840 AT1G33720.2 32.468 308 164 11 253 525 93 391 4.89e-39 147
Msa0182840 AT1G01190.1 25.893 448 297 13 65 501 75 498 1.32e-38 149
Msa0182840 AT2G27010.1 26.471 476 301 13 70 535 42 478 1.35e-38 148
Msa0182840 AT1G01190.2 25.893 448 297 13 65 501 80 503 1.53e-38 148
Msa0182840 AT3G20130.2 26.747 415 255 11 122 514 73 460 6.32e-38 146
Msa0182840 AT4G20240.2 26.933 375 254 8 64 431 34 395 9.22e-38 144
Msa0182840 AT1G28430.1 23.789 454 316 12 85 525 62 498 2.31e-37 145
Msa0182840 AT1G13080.2 29.379 354 215 12 181 516 30 366 7.14e-37 141
Msa0182840 AT2G45580.2 32.862 283 170 10 253 524 71 344 1.05e-36 140
Msa0182840 AT1G16410.1 22.587 518 367 10 37 535 19 521 1.71e-36 142
Msa0182840 AT3G20090.1 26.494 385 242 11 159 525 1 362 3.08e-36 139
Msa0182840 AT3G20935.1 35.961 203 126 4 324 525 126 325 3.15e-36 138
Msa0182840 AT3G20960.1 25.980 408 264 13 139 534 16 397 3.18e-36 140
Msa0182840 AT3G20120.2 34.742 213 121 5 313 517 152 354 1.82e-35 137
Msa0182840 AT3G20120.3 34.742 213 121 5 313 517 152 354 1.82e-35 137
Msa0182840 AT3G20120.1 34.742 213 121 5 313 517 152 354 1.82e-35 137
Msa0182840 AT4G15380.1 24.242 495 347 8 44 525 16 495 2.85e-35 139
Msa0182840 AT3G25180.2 28.101 395 246 15 28 401 3 380 5.81e-35 136
Msa0182840 AT1G16400.1 22.107 484 355 8 37 503 18 496 5.27e-34 135
Msa0182840 AT3G26180.2 32.906 234 130 5 299 516 128 350 4.74e-32 127
Msa0182840 AT3G20080.4 33.182 220 129 5 313 524 153 362 8.03e-32 127
Msa0182840 AT3G20080.5 33.182 220 129 5 313 524 153 362 8.03e-32 127
Msa0182840 AT3G20080.6 33.182 220 129 5 313 524 153 362 8.03e-32 127
Msa0182840 AT3G20080.3 33.182 220 129 5 313 524 153 362 8.03e-32 127
Msa0182840 AT2G05180.1 26.087 414 275 12 70 472 48 441 8.51e-32 127
Msa0182840 AT5G35917.1 25.845 414 270 13 57 450 35 431 2.19e-29 121
Msa0182840 AT3G53290.1 27.830 424 249 12 117 524 11 393 2.54e-29 120
Msa0182840 AT3G61040.2 27.226 393 254 15 49 428 21 394 2.43e-28 117
Msa0182840 AT5G24960.2 28.093 388 259 12 54 433 24 399 1.38e-27 115
Msa0182840 AT1G31800.1 23.415 410 271 12 94 485 138 522 6.43e-24 106
Msa0182840 AT1G16410.2 21.891 402 289 8 37 419 19 414 1.17e-22 100
Msa0182840 AT4G15110.1 23.736 455 286 13 95 503 110 549 1.89e-22 101
Msa0182840 AT2G45580.3 24.468 376 237 12 74 424 49 402 2.45e-22 99.8
Msa0182840 AT2G26710.1 26.106 452 288 17 60 500 68 484 7.59e-20 93.2
Msa0182840 AT1G13090.1 32.704 159 103 3 64 221 29 184 3.85e-19 88.6
Msa0182840 AT5G24910.1 24.829 439 263 15 93 500 99 501 3.43e-18 88.2
Msa0182840 AT3G14640.1 22.811 434 304 12 77 500 71 483 3.50e-18 88.2
Msa0182840 AT3G14640.2 22.811 434 304 12 77 500 93 505 3.76e-18 88.2
Msa0182840 AT5G52400.1 24.594 431 275 16 88 502 94 490 5.22e-18 87.4
Msa0182840 AT4G39510.1 25.316 237 160 5 287 511 254 485 7.05e-18 87.0
Msa0182840 AT3G14620.1 23.898 431 272 16 77 486 75 470 7.10e-18 87.0
Msa0182840 AT3G53130.1 22.169 415 272 11 95 486 108 494 7.30e-17 84.0
Msa0182840 AT1G57750.1 23.272 434 277 16 103 511 74 476 8.35e-17 83.6
Msa0182840 AT2G44890.1 21.912 502 332 19 34 503 6 479 4.37e-16 81.6
Msa0182840 AT5G24900.1 21.578 431 286 15 93 500 95 496 1.03e-15 80.5
Msa0182840 AT3G14650.1 22.348 443 265 12 77 486 71 467 1.39e-15 80.1
Msa0182840 AT3G14690.2 23.877 423 283 15 77 486 106 502 2.07e-15 79.3
Msa0182840 AT2G21910.1 23.303 442 288 17 96 511 70 486 2.30e-15 79.3
Msa0182840 AT3G14690.1 23.877 423 283 15 77 486 71 467 3.54e-15 78.6
Msa0182840 AT3G14680.1 23.133 415 278 12 81 481 75 462 7.18e-15 77.8
Msa0182840 AT2G23180.1 28.804 184 120 3 334 511 314 492 7.32e-15 77.8
Msa0182840 AT5G02900.1 23.897 272 179 7 261 509 190 456 7.71e-15 77.4
Msa0182840 AT1G47620.1 28.571 182 121 3 334 511 319 495 8.82e-15 77.4
Msa0182840 AT5G24900.2 22.400 375 252 14 142 500 28 379 1.88e-14 75.9
Msa0182840 AT2G28850.1 28.000 225 141 10 288 503 247 459 2.98e-14 75.9
Msa0182840 AT1G73340.1 21.921 479 326 15 32 501 13 452 6.90e-14 74.7
Msa0182840 AT3G14630.2 22.803 421 287 13 91 500 139 532 7.34e-14 74.7
Msa0182840 AT5G52320.2 22.171 433 284 16 103 509 75 480 7.82e-14 74.3
Msa0182840 AT5G52320.1 22.171 433 284 16 103 509 75 480 8.28e-14 74.3
Msa0182840 AT3G14630.1 22.803 421 287 13 91 500 84 477 8.56e-14 74.3
Msa0182840 AT5G35920.1 30.159 126 83 2 389 513 7 128 1.53e-13 68.9
Msa0182840 AT3G14660.1 22.482 427 284 14 77 486 71 467 1.81e-13 73.2
Msa0182840 AT4G32170.1 26.667 180 124 3 334 510 308 482 2.61e-13 72.8
Msa0182840 AT5G38450.1 22.633 433 303 13 79 500 74 485 3.62e-13 72.4
Msa0182840 AT2G45560.2 24.415 299 207 9 43 328 9 301 6.78e-13 70.1
Msa0182840 AT2G26170.2 27.368 190 130 5 313 500 222 405 1.01e-12 70.5
Msa0182840 AT3G26125.1 28.272 191 107 5 334 503 323 504 1.23e-12 70.9
Msa0182840 AT2G26170.1 27.368 190 130 5 313 500 305 488 1.61e-12 70.5
Msa0182840 AT1G65340.1 25.140 179 126 3 334 511 312 483 1.75e-12 70.1
Msa0182840 AT2G45970.1 23.750 480 321 15 33 485 3 464 1.94e-12 70.1
Msa0182840 AT2G45560.3 27.041 196 129 5 43 227 9 201 2.77e-12 67.4
Msa0182840 AT1G67110.1 23.176 466 307 14 43 500 57 479 3.33e-12 69.3
Msa0182840 AT4G39490.1 26.531 196 118 4 334 511 309 496 5.10e-12 68.9
Msa0182840 AT3G56630.1 22.689 476 313 19 60 506 23 472 7.79e-12 68.2
Msa0182840 AT4G39500.1 26.776 183 119 4 334 510 272 445 8.19e-12 67.8
Msa0182840 AT4G39500.2 26.776 183 119 4 334 510 322 495 9.67e-12 67.8
Msa0182840 AT3G14660.2 29.412 153 100 3 335 486 176 321 1.51e-11 66.6
Msa0182840 AT3G01900.1 22.574 474 289 20 66 503 31 462 1.62e-11 67.0
Msa0182840 AT1G57750.2 22.917 384 245 15 103 461 74 431 7.32e-11 64.7
Msa0182840 AT4G20235.1 24.204 157 113 3 36 188 5 159 7.67e-11 64.3
Msa0182840 AT3G53305.1 31.469 143 84 2 377 516 183 314 8.00e-11 63.9
Msa0182840 AT2G29090.2 22.687 454 283 17 64 500 50 452 8.61e-11 64.7
Msa0182840 AT2G29090.1 22.687 454 283 17 64 500 50 452 8.61e-11 64.7

Find 114 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCACATGCTACTATAATTT+TGG 0.087381 1_4:-71655193 None:intergenic
TATTCATGCTTCTAATTAAT+TGG 0.116068 1_4:-71656727 None:intergenic
CCAATATTGGGATTGGTTAT+TGG 0.163761 1_4:+71656589 Msa0182840:CDS
TGATATCTCATCACGAATTT+TGG 0.170810 1_4:-71656206 None:intergenic
TATACTTGCATTGCCAATAT+TGG 0.185290 1_4:+71656576 Msa0182840:CDS
TTCAATGTAGCTTGTAAATA+TGG 0.211831 1_4:-71656277 None:intergenic
TAGCTTGTAAATATGGTAAT+TGG 0.216052 1_4:-71656270 None:intergenic
AGAAGATCCTTTGTTTATTC+AGG 0.220852 1_4:+71655358 Msa0182840:CDS
CCAAATATAGGAACAGAAAA+AGG 0.221284 1_4:-71654873 None:intergenic
TAACAATGTCATTAGCCTTT+AGG 0.230345 1_4:-71655244 None:intergenic
AAGATTGATGTTAGTGAAAA+AGG 0.236921 1_4:+71656655 Msa0182840:CDS
GTTCAGGCCAGAGAGGTTTA+TGG 0.244464 1_4:+71656459 Msa0182840:CDS
ACAACTACCTTAGACTCTTT+TGG 0.248706 1_4:-71656385 None:intergenic
CCAATAACCAATCCCAATAT+TGG 0.264649 1_4:-71656589 None:intergenic
GTATATAAATAATAAGATTA+TGG 0.265858 1_4:-71654799 None:intergenic
ATCTTCTTGAGATTCAAATT+TGG 0.276322 1_4:-71655342 None:intergenic
GAGATATCAAAAGTGCTTAA+AGG 0.304585 1_4:+71656220 Msa0182840:CDS
CTGTTCCTATATTTGGAAAC+TGG 0.307968 1_4:+71654880 Msa0182840:CDS
AATTGTGATGGGTTGGATTA+GGG 0.309221 1_4:-71654609 None:intergenic
GAATTGTGATGGGTTGGATT+AGG 0.310308 1_4:-71654610 None:intergenic
ATCCTTGTAAGAAAGTATTT+AGG 0.321223 1_4:-71656761 None:intergenic
CTTGTAATGTTTCATCATTA+AGG 0.323181 1_4:+71656817 Msa0182840:three_prime_UTR
ACATCAATCTTTGTCCCATT+TGG 0.324398 1_4:-71656643 None:intergenic
CATTCACAAGGTGTCGAATT+CGG 0.332376 1_4:+71655038 Msa0182840:CDS
CACTATTCCAAAAGAGTCTA+AGG 0.336542 1_4:+71656378 Msa0182840:CDS
AGGTTTATGGAAGAAGAAAA+TGG 0.344219 1_4:+71656472 Msa0182840:CDS
ATGAGATTGTTTATATATGT+TGG 0.344618 1_4:-71654585 None:intergenic
ATACTTGCATTGCCAATATT+GGG 0.348313 1_4:+71656577 Msa0182840:CDS
GCATCCATGTCACAAACTTA+TGG 0.355356 1_4:+71654939 Msa0182840:CDS
CTCCTAGCTTAGCCTCTTCA+AGG 0.360974 1_4:-71656351 None:intergenic
TTTGATATCTTCACTGGTAA+TGG 0.361516 1_4:+71655083 Msa0182840:CDS
TGAAGCCAGTTTCCAAATAT+AGG 0.379114 1_4:-71654885 None:intergenic
GGGAAAAGCCAGAGGAGTTC+AGG 0.379839 1_4:+71656443 Msa0182840:CDS
TTTCTTGTGGCTGTTTGAAT+TGG 0.379847 1_4:-71654832 None:intergenic
TATATAAATAATAAGATTAT+GGG 0.385112 1_4:-71654798 None:intergenic
CTCCTAAATACTTTCTTACA+AGG 0.396955 1_4:+71656759 Msa0182840:three_prime_UTR
GCAAGTCTTTGCACTTGTTA+AGG 0.401186 1_4:-71655478 None:intergenic
TGAGATTGTTTATATATGTT+GGG 0.401787 1_4:-71654584 None:intergenic
TCTTCTTCCATAAACCTCTC+TGG 0.415289 1_4:-71656466 None:intergenic
CATGCTTCTAATTAATTGGA+TGG 0.416508 1_4:-71656723 None:intergenic
TTATCACTACTCATTGTCAT+TGG 0.418192 1_4:+71656857 Msa0182840:three_prime_UTR
CTCTCTGGCCTGAACTCCTC+TGG 0.419325 1_4:-71656451 None:intergenic
TGCATTGCCAATATTGGGAT+TGG 0.422760 1_4:+71656582 Msa0182840:CDS
AGAACTTGTGTGGCAAGGTT+TGG 0.429159 1_4:-71655014 None:intergenic
TGTTTGAATTGGAATGAGTT+AGG 0.435056 1_4:-71654821 None:intergenic
GGCAATGCAAGTATAATTCC+AGG 0.436185 1_4:-71656568 None:intergenic
GGCTTGCAAATAATCCATTA+TGG 0.437729 1_4:+71656419 Msa0182840:CDS
TATCTCATGCTTCTCCCCAT+TGG 0.439651 1_4:-71656020 None:intergenic
CTCCTTCTTCCAACACCAAA+TGG 0.439686 1_4:-71656541 None:intergenic
GGGATTGGTTATTGGAAAGT+TGG 0.444232 1_4:+71656597 Msa0182840:CDS
GTGGGAACAAGAGATGGATT+TGG 0.456128 1_4:+71655211 Msa0182840:CDS
CTTTGTTTATTCAGGCTACA+AGG 0.457477 1_4:+71655366 Msa0182840:CDS
TTTGAGATGAAGGGTCCAAA+TGG 0.459373 1_4:+71656628 Msa0182840:CDS
TAACTCTGAGAGAAGCCGTT+TGG 0.459987 1_4:+71655391 Msa0182840:CDS
AACACTATGGTCCATGGAAT+GGG 0.462904 1_4:+71656147 Msa0182840:CDS
GTTGTCTTTGATATCTTCAC+TGG 0.469116 1_4:+71655077 Msa0182840:CDS
TGCCATTTGGTGTTGGAAGA+AGG 0.471804 1_4:+71656539 Msa0182840:CDS
AGCAATGGAGGTTGAGAGAG+AGG 0.473548 1_4:-71654766 None:intergenic
CTAAGGTAGTTGTTAATGCT+TGG 0.478997 1_4:+71656395 Msa0182840:CDS
AGGTAGTTGTTAATGCTTGG+TGG 0.488346 1_4:+71656398 Msa0182840:CDS
AATGGAATTGATGCTGTTGC+TGG 0.494586 1_4:+71656490 Msa0182840:CDS
ATTGATGCTGTTGCTGGTGG+AGG 0.502170 1_4:+71656496 Msa0182840:CDS
TTTGGTAGTTCAAGACCTAA+AGG 0.503601 1_4:+71655229 Msa0182840:CDS
TGTGGCACTAACAATGGAAT+TGG 0.505105 1_4:-71656322 None:intergenic
CTCTGCTATTGCCCATTCCA+TGG 0.506561 1_4:-71656158 None:intergenic
AATGAAGAATTGTGATGGGT+TGG 0.507584 1_4:-71654616 None:intergenic
TGTTGTATAATATCATGTAT+AGG 0.510844 1_4:+71655306 Msa0182840:CDS
TTGAGATGAAGGGTCCAAAT+GGG 0.513105 1_4:+71656629 Msa0182840:CDS
AGTGCAAAGACTTGCAAACT+AGG 0.513772 1_4:+71655486 Msa0182840:CDS
TAGCATGTGGGAACAAGAGA+TGG 0.517111 1_4:+71655205 Msa0182840:CDS
ATTCAAAACTCTGTGCCAAA+CGG 0.524560 1_4:-71655406 None:intergenic
CACTGGTAATGGACAAGACA+TGG 0.525228 1_4:+71655094 Msa0182840:CDS
CAACACTATGGTCCATGGAA+TGG 0.525695 1_4:+71656146 Msa0182840:CDS
TTTGGAAACTGGCTTCAAGT+TGG 0.528996 1_4:+71654891 Msa0182840:CDS
TCCAAAATTATAGTAGCATG+TGG 0.531443 1_4:+71655192 Msa0182840:CDS
TCACTGTCTATGGTGATCAC+TGG 0.533919 1_4:+71655120 Msa0182840:CDS
GAATGAATGAAGAATTGTGA+TGG 0.543256 1_4:-71654621 None:intergenic
AATGACATTGTTAAAAGTGA+AGG 0.546134 1_4:+71655254 Msa0182840:CDS
TGCAAATAATCCATTATGGT+GGG 0.550834 1_4:+71656423 Msa0182840:CDS
GTTGGAAGAAGGAGTTGTCC+TGG 0.554516 1_4:+71656550 Msa0182840:CDS
TTCATGTGTGGCACTAACAA+TGG 0.554765 1_4:-71656328 None:intergenic
TTGCAAATAATCCATTATGG+TGG 0.566374 1_4:+71656422 Msa0182840:CDS
AGGTAGGTATGTGTGTTCCA+TGG 0.567485 1_4:-71654554 None:intergenic
AATGAATGAAGAATTGTGAT+GGG 0.569694 1_4:-71654620 None:intergenic
GCCTCTTCAAGGTTCATGTG+TGG 0.574340 1_4:-71656340 None:intergenic
GAACAAAACAGTAGAGTGGT+TGG 0.574910 1_4:-71656701 None:intergenic
CCAAGTTTGAGTAGGAAAAG+TGG 0.576121 1_4:-71654963 None:intergenic
AGAGACAACACTATGGTCCA+TGG 0.577331 1_4:+71656141 Msa0182840:CDS
AGGTTTGTGCCATTTGGTGT+TGG 0.591497 1_4:+71656532 Msa0182840:CDS
ATATCAAAGACAACGTTGCG+AGG 0.594691 1_4:-71655068 None:intergenic
CAGAGGAGTTCAGGCCAGAG+AGG 0.599738 1_4:+71656452 Msa0182840:CDS
ATCATAGATGCTGAGATGAA+AGG 0.602760 1_4:+71656061 Msa0182840:CDS
CATGGATTCATCACAAACCA+TGG 0.604890 1_4:+71654537 None:intergenic
AACCTTGAAGAGGCTAAGCT+AGG 0.612366 1_4:+71656349 Msa0182840:CDS
CTTGTAGCCTGAATAAACAA+AGG 0.620729 1_4:-71655365 None:intergenic
GCCACACATGAACCTTGAAG+AGG 0.620898 1_4:+71656339 Msa0182840:CDS
GGGAGAGACACAAGCAATGG+AGG 0.621749 1_4:-71654778 None:intergenic
GGAATTGATGCTGTTGCTGG+TGG 0.622718 1_4:+71656493 Msa0182840:CDS
CTGCAATAGAGACAACACTA+TGG 0.631238 1_4:+71656134 Msa0182840:CDS
TATGTTGGGAGTGACGAGGT+AGG 0.633378 1_4:-71654570 None:intergenic
ACAACTACTACATTGAGAAG+AGG 0.634874 1_4:+71655525 Msa0182840:CDS
ACTACTACATTGAGAAGAGG+AGG 0.635199 1_4:+71655528 Msa0182840:CDS
CCAAAATTATAGTAGCATGT+GGG 0.637648 1_4:+71655193 Msa0182840:CDS
TATGGGAGAGACACAAGCAA+TGG 0.644987 1_4:-71654781 None:intergenic
TTGATGCTGTTGCTGGTGGA+GGG 0.645611 1_4:+71656497 Msa0182840:CDS
ACACAAGTTCTTCATTCACA+AGG 0.648627 1_4:+71655026 Msa0182840:CDS
AATGAAGAACTTGTGTGGCA+AGG 0.651530 1_4:-71655019 None:intergenic
GCAAAGACTTGCAAACTAGG+AGG 0.652894 1_4:+71655489 Msa0182840:CDS
GCAATGGAGGTTGAGAGAGA+GGG 0.657238 1_4:-71654765 None:intergenic
GATGGAACAAAACAGTAGAG+TGG 0.661540 1_4:-71656705 None:intergenic
TATATATGTTGGGAGTGACG+AGG 0.666373 1_4:-71654574 None:intergenic
TGGTCCATAAGTTTGTGACA+TGG 0.694950 1_4:-71654943 None:intergenic
ATTATGGTGGGAAAAGCCAG+AGG 0.721699 1_4:+71656435 Msa0182840:CDS
TTGTGAATGAAGAACTTGTG+TGG 0.724900 1_4:-71655024 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATATAATTAATA+TGG - chr1_4:71655933-71655952 None:intergenic 0.0%
!! AAAAAATTATATAATTAATA+TGG - chr1_4:71655933-71655952 None:intergenic 0.0%
!! GTATATAAATAATAAGATTA+TGG - chr1_4:71654802-71654821 None:intergenic 10.0%
!! GTATATAAATAATAAGATTA+TGG - chr1_4:71654802-71654821 None:intergenic 10.0%
!!! ATAATTAATATGGATTTTTG+TGG - chr1_4:71655923-71655942 None:intergenic 15.0%
!!! ATAATTAATATGGATTTTTG+TGG - chr1_4:71655923-71655942 None:intergenic 15.0%
!! TGAGATTGTTTATATATGTT+GGG - chr1_4:71654587-71654606 None:intergenic 20.0%
!! ATGAGATTGTTTATATATGT+TGG - chr1_4:71654588-71654607 None:intergenic 20.0%
!!! AAGAGTTTTGTAGTAATTAT+TGG - chr1_4:71654738-71654757 None:intergenic 20.0%
!! TGTTGTATAATATCATGTAT+AGG + chr1_4:71655306-71655325 Msa0182840:CDS 20.0%
!!! CAGAGTTTTGAATATAATTA+TGG + chr1_4:71655416-71655435 Msa0182840:CDS 20.0%
!!! AATAAGTTGATAATAGCTAA+CGG + chr1_4:71655690-71655709 Msa0182840:intron 20.0%
!! TACTCTATGTTACATATAAA+TGG - chr1_4:71655968-71655987 None:intergenic 20.0%
!! TATTCATGCTTCTAATTAAT+TGG - chr1_4:71656730-71656749 None:intergenic 20.0%
!! TGAGATTGTTTATATATGTT+GGG - chr1_4:71654587-71654606 None:intergenic 20.0%
!! ATGAGATTGTTTATATATGT+TGG - chr1_4:71654588-71654607 None:intergenic 20.0%
!!! AAGAGTTTTGTAGTAATTAT+TGG - chr1_4:71654738-71654757 None:intergenic 20.0%
!! TGTTGTATAATATCATGTAT+AGG + chr1_4:71655306-71655325 Msa0182840:CDS 20.0%
!!! CAGAGTTTTGAATATAATTA+TGG + chr1_4:71655416-71655435 Msa0182840:CDS 20.0%
!!! AATAAGTTGATAATAGCTAA+CGG + chr1_4:71655690-71655709 Msa0182840:intron 20.0%
!! TACTCTATGTTACATATAAA+TGG - chr1_4:71655968-71655987 None:intergenic 20.0%
!! TATTCATGCTTCTAATTAAT+TGG - chr1_4:71656730-71656749 None:intergenic 20.0%
! AATGAATGAAGAATTGTGAT+GGG - chr1_4:71654623-71654642 None:intergenic 25.0%
! GCAAAAAGAGTGAAAAATAT+TGG - chr1_4:71654705-71654724 None:intergenic 25.0%
! CAAATATAGGAACAGAAAAA+GGG - chr1_4:71654875-71654894 None:intergenic 25.0%
! ACAACTTTGTTAGTGAAAAA+CGG - chr1_4:71655173-71655192 None:intergenic 25.0%
! AATGACATTGTTAAAAGTGA+AGG + chr1_4:71655254-71655273 Msa0182840:CDS 25.0%
! ATCTTCTTGAGATTCAAATT+TGG - chr1_4:71655345-71655364 None:intergenic 25.0%
! TAATTAAGTGCTTATTGCAT+AGG + chr1_4:71655603-71655622 Msa0182840:intron 25.0%
!! AGACTATTTGGAATAGTTTA+TGG - chr1_4:71655734-71655753 None:intergenic 25.0%
!! CATAAGTATTTGAGACTATT+TGG - chr1_4:71655746-71655765 None:intergenic 25.0%
! AGTATAACAAAATGCCAATA+GGG - chr1_4:71655887-71655906 None:intergenic 25.0%
! TAGTATAACAAAATGCCAAT+AGG - chr1_4:71655888-71655907 None:intergenic 25.0%
!! GATTTTTGTGGATGTATTTT+TGG - chr1_4:71655911-71655930 None:intergenic 25.0%
! TTTCTTCTCCAGAAAAATAA+TGG + chr1_4:71655994-71656013 Msa0182840:intron 25.0%
!! TAGCTTGTAAATATGGTAAT+TGG - chr1_4:71656273-71656292 None:intergenic 25.0%
!! TTCAATGTAGCTTGTAAATA+TGG - chr1_4:71656280-71656299 None:intergenic 25.0%
! AAGATTGATGTTAGTGAAAA+AGG + chr1_4:71656655-71656674 Msa0182840:CDS 25.0%
!!! ATCCTTGTAAGAAAGTATTT+AGG - chr1_4:71656764-71656783 None:intergenic 25.0%
! CTTGTAATGTTTCATCATTA+AGG + chr1_4:71656817-71656836 Msa0182840:three_prime_UTR 25.0%
! AATGAATGAAGAATTGTGAT+GGG - chr1_4:71654623-71654642 None:intergenic 25.0%
! GCAAAAAGAGTGAAAAATAT+TGG - chr1_4:71654705-71654724 None:intergenic 25.0%
! CAAATATAGGAACAGAAAAA+GGG - chr1_4:71654875-71654894 None:intergenic 25.0%
! ACAACTTTGTTAGTGAAAAA+CGG - chr1_4:71655173-71655192 None:intergenic 25.0%
! AATGACATTGTTAAAAGTGA+AGG + chr1_4:71655254-71655273 Msa0182840:CDS 25.0%
! ATCTTCTTGAGATTCAAATT+TGG - chr1_4:71655345-71655364 None:intergenic 25.0%
! TAATTAAGTGCTTATTGCAT+AGG + chr1_4:71655603-71655622 Msa0182840:intron 25.0%
!! AGACTATTTGGAATAGTTTA+TGG - chr1_4:71655734-71655753 None:intergenic 25.0%
!! CATAAGTATTTGAGACTATT+TGG - chr1_4:71655746-71655765 None:intergenic 25.0%
! AGTATAACAAAATGCCAATA+GGG - chr1_4:71655887-71655906 None:intergenic 25.0%
! TAGTATAACAAAATGCCAAT+AGG - chr1_4:71655888-71655907 None:intergenic 25.0%
!! GATTTTTGTGGATGTATTTT+TGG - chr1_4:71655911-71655930 None:intergenic 25.0%
! TTTCTTCTCCAGAAAAATAA+TGG + chr1_4:71655994-71656013 Msa0182840:intron 25.0%
!! TAGCTTGTAAATATGGTAAT+TGG - chr1_4:71656273-71656292 None:intergenic 25.0%
!! TTCAATGTAGCTTGTAAATA+TGG - chr1_4:71656280-71656299 None:intergenic 25.0%
! AAGATTGATGTTAGTGAAAA+AGG + chr1_4:71656655-71656674 Msa0182840:CDS 25.0%
!!! ATCCTTGTAAGAAAGTATTT+AGG - chr1_4:71656764-71656783 None:intergenic 25.0%
! CTTGTAATGTTTCATCATTA+AGG + chr1_4:71656817-71656836 Msa0182840:three_prime_UTR 25.0%
GAATGAATGAAGAATTGTGA+TGG - chr1_4:71654624-71654643 None:intergenic 30.0%
!!! TTGGTTTTTTTGAGAGTTGA+AGG - chr1_4:71654686-71654705 None:intergenic 30.0%
TGTTTGAATTGGAATGAGTT+AGG - chr1_4:71654824-71654843 None:intergenic 30.0%
CCAAATATAGGAACAGAAAA+AGG - chr1_4:71654876-71654895 None:intergenic 30.0%
! CCTTTTTCTGTTCCTATATT+TGG + chr1_4:71654873-71654892 Msa0182840:CDS 30.0%
TTTGATATCTTCACTGGTAA+TGG + chr1_4:71655083-71655102 Msa0182840:CDS 30.0%
TCCAAAATTATAGTAGCATG+TGG + chr1_4:71655192-71655211 Msa0182840:CDS 30.0%
CCAAAATTATAGTAGCATGT+GGG + chr1_4:71655193-71655212 Msa0182840:CDS 30.0%
!! TAACAATGTCATTAGCCTTT+AGG - chr1_4:71655247-71655266 None:intergenic 30.0%
! AGAAGATCCTTTGTTTATTC+AGG + chr1_4:71655358-71655377 Msa0182840:CDS 30.0%
TATTAGTCAAGTTTCTTGTC+TGG + chr1_4:71655570-71655589 Msa0182840:intron 30.0%
TGCTTAACTGCTTATGATAT+AGG + chr1_4:71655626-71655645 Msa0182840:intron 30.0%
! TGATATCTCATCACGAATTT+TGG - chr1_4:71656209-71656228 None:intergenic 30.0%
!! GAGATATCAAAAGTGCTTAA+AGG + chr1_4:71656220-71656239 Msa0182840:CDS 30.0%
TTGCAAATAATCCATTATGG+TGG + chr1_4:71656422-71656441 Msa0182840:CDS 30.0%
TGCAAATAATCCATTATGGT+GGG + chr1_4:71656423-71656442 Msa0182840:CDS 30.0%
AGGTTTATGGAAGAAGAAAA+TGG + chr1_4:71656472-71656491 Msa0182840:CDS 30.0%
TATACTTGCATTGCCAATAT+TGG + chr1_4:71656576-71656595 Msa0182840:CDS 30.0%
ATACTTGCATTGCCAATATT+GGG + chr1_4:71656577-71656596 Msa0182840:CDS 30.0%
!!! GTGTCAAATTTTGAGATGAA+GGG + chr1_4:71656619-71656638 Msa0182840:CDS 30.0%
ATTGATGTTAGTGAAAAAGG+TGG + chr1_4:71656658-71656677 Msa0182840:CDS 30.0%
CATGCTTCTAATTAATTGGA+TGG - chr1_4:71656726-71656745 None:intergenic 30.0%
CTCCTAAATACTTTCTTACA+AGG + chr1_4:71656759-71656778 Msa0182840:three_prime_UTR 30.0%
TTATCACTACTCATTGTCAT+TGG + chr1_4:71656857-71656876 Msa0182840:three_prime_UTR 30.0%
GAATGAATGAAGAATTGTGA+TGG - chr1_4:71654624-71654643 None:intergenic 30.0%
!!! TTGGTTTTTTTGAGAGTTGA+AGG - chr1_4:71654686-71654705 None:intergenic 30.0%
TGTTTGAATTGGAATGAGTT+AGG - chr1_4:71654824-71654843 None:intergenic 30.0%
CCAAATATAGGAACAGAAAA+AGG - chr1_4:71654876-71654895 None:intergenic 30.0%
! CCTTTTTCTGTTCCTATATT+TGG + chr1_4:71654873-71654892 Msa0182840:CDS 30.0%
TTTGATATCTTCACTGGTAA+TGG + chr1_4:71655083-71655102 Msa0182840:CDS 30.0%
TCCAAAATTATAGTAGCATG+TGG + chr1_4:71655192-71655211 Msa0182840:CDS 30.0%
CCAAAATTATAGTAGCATGT+GGG + chr1_4:71655193-71655212 Msa0182840:CDS 30.0%
!! TAACAATGTCATTAGCCTTT+AGG - chr1_4:71655247-71655266 None:intergenic 30.0%
! AGAAGATCCTTTGTTTATTC+AGG + chr1_4:71655358-71655377 Msa0182840:CDS 30.0%
TATTAGTCAAGTTTCTTGTC+TGG + chr1_4:71655570-71655589 Msa0182840:intron 30.0%
TGCTTAACTGCTTATGATAT+AGG + chr1_4:71655626-71655645 Msa0182840:intron 30.0%
! TGATATCTCATCACGAATTT+TGG - chr1_4:71656209-71656228 None:intergenic 30.0%
!! GAGATATCAAAAGTGCTTAA+AGG + chr1_4:71656220-71656239 Msa0182840:CDS 30.0%
TTGCAAATAATCCATTATGG+TGG + chr1_4:71656422-71656441 Msa0182840:CDS 30.0%
TGCAAATAATCCATTATGGT+GGG + chr1_4:71656423-71656442 Msa0182840:CDS 30.0%
AGGTTTATGGAAGAAGAAAA+TGG + chr1_4:71656472-71656491 Msa0182840:CDS 30.0%
TATACTTGCATTGCCAATAT+TGG + chr1_4:71656576-71656595 Msa0182840:CDS 30.0%
ATACTTGCATTGCCAATATT+GGG + chr1_4:71656577-71656596 Msa0182840:CDS 30.0%
!!! GTGTCAAATTTTGAGATGAA+GGG + chr1_4:71656619-71656638 Msa0182840:CDS 30.0%
ATTGATGTTAGTGAAAAAGG+TGG + chr1_4:71656658-71656677 Msa0182840:CDS 30.0%
CATGCTTCTAATTAATTGGA+TGG - chr1_4:71656726-71656745 None:intergenic 30.0%
CTCCTAAATACTTTCTTACA+AGG + chr1_4:71656759-71656778 Msa0182840:three_prime_UTR 30.0%
TTATCACTACTCATTGTCAT+TGG + chr1_4:71656857-71656876 Msa0182840:three_prime_UTR 30.0%
!! AATTGTGATGGGTTGGATTA+GGG - chr1_4:71654612-71654631 None:intergenic 35.0%
!! AATGAAGAATTGTGATGGGT+TGG - chr1_4:71654619-71654638 None:intergenic 35.0%
!!! GAGTCATGTTTTGATTTGTG+AGG - chr1_4:71654662-71654681 None:intergenic 35.0%
TTTCTTGTGGCTGTTTGAAT+TGG - chr1_4:71654835-71654854 None:intergenic 35.0%
! GAGGTGAAGAATTTTTCTTG+TGG - chr1_4:71654848-71654867 None:intergenic 35.0%
CTGTTCCTATATTTGGAAAC+TGG + chr1_4:71654880-71654899 Msa0182840:CDS 35.0%
TGAAGCCAGTTTCCAAATAT+AGG - chr1_4:71654888-71654907 None:intergenic 35.0%
!!! TTTTGGAACCAAGTTTGAGT+AGG - chr1_4:71654974-71654993 None:intergenic 35.0%
CAAACTTGGTTCCAAAAACT+TGG + chr1_4:71654977-71654996 Msa0182840:CDS 35.0%
! AGAGACAACAACCAAGTTTT+TGG - chr1_4:71654991-71655010 None:intergenic 35.0%
TTGTGAATGAAGAACTTGTG+TGG - chr1_4:71655027-71655046 None:intergenic 35.0%
ACACAAGTTCTTCATTCACA+AGG + chr1_4:71655026-71655045 Msa0182840:CDS 35.0%
GTTGTCTTTGATATCTTCAC+TGG + chr1_4:71655077-71655096 Msa0182840:CDS 35.0%
! CCCACATGCTACTATAATTT+TGG - chr1_4:71655196-71655215 None:intergenic 35.0%
! TTTGGTAGTTCAAGACCTAA+AGG + chr1_4:71655229-71655248 Msa0182840:CDS 35.0%
CTTGTAGCCTGAATAAACAA+AGG - chr1_4:71655368-71655387 None:intergenic 35.0%
! CTTTGTTTATTCAGGCTACA+AGG + chr1_4:71655366-71655385 Msa0182840:CDS 35.0%
ATTCAAAACTCTGTGCCAAA+CGG - chr1_4:71655409-71655428 None:intergenic 35.0%
! GAGATTTTATTCCCTTGCTT+AGG + chr1_4:71655438-71655457 Msa0182840:CDS 35.0%
TTAAGGTAGCCTCTCAAAAA+TGG - chr1_4:71655464-71655483 None:intergenic 35.0%
ACAACTACTACATTGAGAAG+AGG + chr1_4:71655525-71655544 Msa0182840:CDS 35.0%
! ACACGTTTGAGTTTATCTAC+TGG - chr1_4:71655769-71655788 None:intergenic 35.0%
GTGATTGGATCTATGTGTAA+AGG - chr1_4:71655858-71655877 None:intergenic 35.0%
!! ATTGGCTGCCATTATTTTTC+TGG - chr1_4:71656005-71656024 None:intergenic 35.0%
AGAAAAATAATGGCAGCCAA+TGG + chr1_4:71656004-71656023 Msa0182840:intron 35.0%
GAAAAATAATGGCAGCCAAT+GGG + chr1_4:71656005-71656024 Msa0182840:intron 35.0%
AAAAATAATGGCAGCCAATG+GGG + chr1_4:71656006-71656025 Msa0182840:CDS 35.0%
ATCATAGATGCTGAGATGAA+AGG + chr1_4:71656061-71656080 Msa0182840:CDS 35.0%
!!! CGAATTTTGGTTTGAACTTC+TGG - chr1_4:71656196-71656215 None:intergenic 35.0%
CACTATTCCAAAAGAGTCTA+AGG + chr1_4:71656378-71656397 Msa0182840:CDS 35.0%
! ACAACTACCTTAGACTCTTT+TGG - chr1_4:71656388-71656407 None:intergenic 35.0%
CTAAGGTAGTTGTTAATGCT+TGG + chr1_4:71656395-71656414 Msa0182840:CDS 35.0%
GGCTTGCAAATAATCCATTA+TGG + chr1_4:71656419-71656438 Msa0182840:CDS 35.0%
!!! GATTTTAGGTTTGTGCCATT+TGG + chr1_4:71656526-71656545 Msa0182840:CDS 35.0%
CCAATAACCAATCCCAATAT+TGG - chr1_4:71656592-71656611 None:intergenic 35.0%
!! CCAATATTGGGATTGGTTAT+TGG + chr1_4:71656589-71656608 Msa0182840:CDS 35.0%
!!! GGTGTCAAATTTTGAGATGA+AGG + chr1_4:71656618-71656637 Msa0182840:CDS 35.0%
ACATCAATCTTTGTCCCATT+TGG - chr1_4:71656646-71656665 None:intergenic 35.0%
!! AATTGTGATGGGTTGGATTA+GGG - chr1_4:71654612-71654631 None:intergenic 35.0%
!! AATGAAGAATTGTGATGGGT+TGG - chr1_4:71654619-71654638 None:intergenic 35.0%
!!! GAGTCATGTTTTGATTTGTG+AGG - chr1_4:71654662-71654681 None:intergenic 35.0%
TTTCTTGTGGCTGTTTGAAT+TGG - chr1_4:71654835-71654854 None:intergenic 35.0%
! GAGGTGAAGAATTTTTCTTG+TGG - chr1_4:71654848-71654867 None:intergenic 35.0%
CTGTTCCTATATTTGGAAAC+TGG + chr1_4:71654880-71654899 Msa0182840:CDS 35.0%
TGAAGCCAGTTTCCAAATAT+AGG - chr1_4:71654888-71654907 None:intergenic 35.0%
!!! TTTTGGAACCAAGTTTGAGT+AGG - chr1_4:71654974-71654993 None:intergenic 35.0%
CAAACTTGGTTCCAAAAACT+TGG + chr1_4:71654977-71654996 Msa0182840:CDS 35.0%
! AGAGACAACAACCAAGTTTT+TGG - chr1_4:71654991-71655010 None:intergenic 35.0%
TTGTGAATGAAGAACTTGTG+TGG - chr1_4:71655027-71655046 None:intergenic 35.0%
ACACAAGTTCTTCATTCACA+AGG + chr1_4:71655026-71655045 Msa0182840:CDS 35.0%
GTTGTCTTTGATATCTTCAC+TGG + chr1_4:71655077-71655096 Msa0182840:CDS 35.0%
! CCCACATGCTACTATAATTT+TGG - chr1_4:71655196-71655215 None:intergenic 35.0%
! TTTGGTAGTTCAAGACCTAA+AGG + chr1_4:71655229-71655248 Msa0182840:CDS 35.0%
CTTGTAGCCTGAATAAACAA+AGG - chr1_4:71655368-71655387 None:intergenic 35.0%
! CTTTGTTTATTCAGGCTACA+AGG + chr1_4:71655366-71655385 Msa0182840:CDS 35.0%
ATTCAAAACTCTGTGCCAAA+CGG - chr1_4:71655409-71655428 None:intergenic 35.0%
! GAGATTTTATTCCCTTGCTT+AGG + chr1_4:71655438-71655457 Msa0182840:CDS 35.0%
TTAAGGTAGCCTCTCAAAAA+TGG - chr1_4:71655464-71655483 None:intergenic 35.0%
ACAACTACTACATTGAGAAG+AGG + chr1_4:71655525-71655544 Msa0182840:CDS 35.0%
! ACACGTTTGAGTTTATCTAC+TGG - chr1_4:71655769-71655788 None:intergenic 35.0%
GTGATTGGATCTATGTGTAA+AGG - chr1_4:71655858-71655877 None:intergenic 35.0%
!! ATTGGCTGCCATTATTTTTC+TGG - chr1_4:71656005-71656024 None:intergenic 35.0%
AGAAAAATAATGGCAGCCAA+TGG + chr1_4:71656004-71656023 Msa0182840:intron 35.0%
GAAAAATAATGGCAGCCAAT+GGG + chr1_4:71656005-71656024 Msa0182840:intron 35.0%
AAAAATAATGGCAGCCAATG+GGG + chr1_4:71656006-71656025 Msa0182840:CDS 35.0%
ATCATAGATGCTGAGATGAA+AGG + chr1_4:71656061-71656080 Msa0182840:CDS 35.0%
!!! CGAATTTTGGTTTGAACTTC+TGG - chr1_4:71656196-71656215 None:intergenic 35.0%
CACTATTCCAAAAGAGTCTA+AGG + chr1_4:71656378-71656397 Msa0182840:CDS 35.0%
! ACAACTACCTTAGACTCTTT+TGG - chr1_4:71656388-71656407 None:intergenic 35.0%
CTAAGGTAGTTGTTAATGCT+TGG + chr1_4:71656395-71656414 Msa0182840:CDS 35.0%
GGCTTGCAAATAATCCATTA+TGG + chr1_4:71656419-71656438 Msa0182840:CDS 35.0%
!!! GATTTTAGGTTTGTGCCATT+TGG + chr1_4:71656526-71656545 Msa0182840:CDS 35.0%
CCAATAACCAATCCCAATAT+TGG - chr1_4:71656592-71656611 None:intergenic 35.0%
!! CCAATATTGGGATTGGTTAT+TGG + chr1_4:71656589-71656608 Msa0182840:CDS 35.0%
!!! GGTGTCAAATTTTGAGATGA+AGG + chr1_4:71656618-71656637 Msa0182840:CDS 35.0%
ACATCAATCTTTGTCCCATT+TGG - chr1_4:71656646-71656665 None:intergenic 35.0%
TATATATGTTGGGAGTGACG+AGG - chr1_4:71654577-71654596 None:intergenic 40.0%
!! GAATTGTGATGGGTTGGATT+AGG - chr1_4:71654613-71654632 None:intergenic 40.0%
ATAGGAACAGAAAAAGGGCT+TGG - chr1_4:71654870-71654889 None:intergenic 40.0%
! TTTGGAAACTGGCTTCAAGT+TGG + chr1_4:71654891-71654910 Msa0182840:CDS 40.0%
GCATCCATGTCACAAACTTA+TGG + chr1_4:71654939-71654958 Msa0182840:CDS 40.0%
TGGTCCATAAGTTTGTGACA+TGG - chr1_4:71654946-71654965 None:intergenic 40.0%
CCAAGTTTGAGTAGGAAAAG+TGG - chr1_4:71654966-71654985 None:intergenic 40.0%
!! CCACTTTTCCTACTCAAACT+TGG + chr1_4:71654963-71654982 Msa0182840:CDS 40.0%
AATGAAGAACTTGTGTGGCA+AGG - chr1_4:71655022-71655041 None:intergenic 40.0%
!! CATTCACAAGGTGTCGAATT+CGG + chr1_4:71655038-71655057 Msa0182840:CDS 40.0%
ATATCAAAGACAACGTTGCG+AGG - chr1_4:71655071-71655090 None:intergenic 40.0%
! GACATGGTTTTCACTGTCTA+TGG + chr1_4:71655110-71655129 Msa0182840:CDS 40.0%
CTCAAAAATGGCCTAAGCAA+GGG - chr1_4:71655452-71655471 None:intergenic 40.0%
TCTCAAAAATGGCCTAAGCA+AGG - chr1_4:71655453-71655472 None:intergenic 40.0%
!!! TTGCTTAGGCCATTTTTGAG+AGG + chr1_4:71655452-71655471 Msa0182840:CDS 40.0%
! GCAAGTCTTTGCACTTGTTA+AGG - chr1_4:71655481-71655500 None:intergenic 40.0%
AGTGCAAAGACTTGCAAACT+AGG + chr1_4:71655486-71655505 Msa0182840:CDS 40.0%
ACTACTACATTGAGAAGAGG+AGG + chr1_4:71655528-71655547 Msa0182840:CDS 40.0%
TGTGGTTAACCACGAAATTG+AGG + chr1_4:71655810-71655829 Msa0182840:intron 40.0%
TTACGTGATCCTCAATTTCG+TGG - chr1_4:71655822-71655841 None:intergenic 40.0%
CCAATAGGGTGAATTGTGAT+TGG - chr1_4:71655873-71655892 None:intergenic 40.0%
CCAATCACAATTCACCCTAT+TGG + chr1_4:71655870-71655889 Msa0182840:intron 40.0%
CTGCAATAGAGACAACACTA+TGG + chr1_4:71656134-71656153 Msa0182840:CDS 40.0%
AACACTATGGTCCATGGAAT+GGG + chr1_4:71656147-71656166 Msa0182840:CDS 40.0%
TGTGGCACTAACAATGGAAT+TGG - chr1_4:71656325-71656344 None:intergenic 40.0%
TTCATGTGTGGCACTAACAA+TGG - chr1_4:71656331-71656350 None:intergenic 40.0%
AGGTAGTTGTTAATGCTTGG+TGG + chr1_4:71656398-71656417 Msa0182840:CDS 40.0%
TCTTCTTCCATAAACCTCTC+TGG - chr1_4:71656469-71656488 None:intergenic 40.0%
AATGGAATTGATGCTGTTGC+TGG + chr1_4:71656490-71656509 Msa0182840:CDS 40.0%
!! GTGGAGGGAAAGTTGATTTT+AGG + chr1_4:71656512-71656531 Msa0182840:CDS 40.0%
GGCAATGCAAGTATAATTCC+AGG - chr1_4:71656571-71656590 None:intergenic 40.0%
TGCATTGCCAATATTGGGAT+TGG + chr1_4:71656582-71656601 Msa0182840:CDS 40.0%
!! GGGATTGGTTATTGGAAAGT+TGG + chr1_4:71656597-71656616 Msa0182840:CDS 40.0%
! TTTGAGATGAAGGGTCCAAA+TGG + chr1_4:71656628-71656647 Msa0182840:CDS 40.0%
TTGAGATGAAGGGTCCAAAT+GGG + chr1_4:71656629-71656648 Msa0182840:CDS 40.0%
GAACAAAACAGTAGAGTGGT+TGG - chr1_4:71656704-71656723 None:intergenic 40.0%
GATGGAACAAAACAGTAGAG+TGG - chr1_4:71656708-71656727 None:intergenic 40.0%
CTCTTTCTCTCTAAGCTGAT+TGG + chr1_4:71656916-71656935 Msa0182840:three_prime_UTR 40.0%
TATATATGTTGGGAGTGACG+AGG - chr1_4:71654577-71654596 None:intergenic 40.0%
!! GAATTGTGATGGGTTGGATT+AGG - chr1_4:71654613-71654632 None:intergenic 40.0%
ATAGGAACAGAAAAAGGGCT+TGG - chr1_4:71654870-71654889 None:intergenic 40.0%
! TTTGGAAACTGGCTTCAAGT+TGG + chr1_4:71654891-71654910 Msa0182840:CDS 40.0%
GCATCCATGTCACAAACTTA+TGG + chr1_4:71654939-71654958 Msa0182840:CDS 40.0%
TGGTCCATAAGTTTGTGACA+TGG - chr1_4:71654946-71654965 None:intergenic 40.0%
CCAAGTTTGAGTAGGAAAAG+TGG - chr1_4:71654966-71654985 None:intergenic 40.0%
!! CCACTTTTCCTACTCAAACT+TGG + chr1_4:71654963-71654982 Msa0182840:CDS 40.0%
AATGAAGAACTTGTGTGGCA+AGG - chr1_4:71655022-71655041 None:intergenic 40.0%
!! CATTCACAAGGTGTCGAATT+CGG + chr1_4:71655038-71655057 Msa0182840:CDS 40.0%
ATATCAAAGACAACGTTGCG+AGG - chr1_4:71655071-71655090 None:intergenic 40.0%
! GACATGGTTTTCACTGTCTA+TGG + chr1_4:71655110-71655129 Msa0182840:CDS 40.0%
CTCAAAAATGGCCTAAGCAA+GGG - chr1_4:71655452-71655471 None:intergenic 40.0%
TCTCAAAAATGGCCTAAGCA+AGG - chr1_4:71655453-71655472 None:intergenic 40.0%
!!! TTGCTTAGGCCATTTTTGAG+AGG + chr1_4:71655452-71655471 Msa0182840:CDS 40.0%
! GCAAGTCTTTGCACTTGTTA+AGG - chr1_4:71655481-71655500 None:intergenic 40.0%
AGTGCAAAGACTTGCAAACT+AGG + chr1_4:71655486-71655505 Msa0182840:CDS 40.0%
ACTACTACATTGAGAAGAGG+AGG + chr1_4:71655528-71655547 Msa0182840:CDS 40.0%
TGTGGTTAACCACGAAATTG+AGG + chr1_4:71655810-71655829 Msa0182840:intron 40.0%
TTACGTGATCCTCAATTTCG+TGG - chr1_4:71655822-71655841 None:intergenic 40.0%
CCAATAGGGTGAATTGTGAT+TGG - chr1_4:71655873-71655892 None:intergenic 40.0%
CCAATCACAATTCACCCTAT+TGG + chr1_4:71655870-71655889 Msa0182840:intron 40.0%
CTGCAATAGAGACAACACTA+TGG + chr1_4:71656134-71656153 Msa0182840:CDS 40.0%
AACACTATGGTCCATGGAAT+GGG + chr1_4:71656147-71656166 Msa0182840:CDS 40.0%
TGTGGCACTAACAATGGAAT+TGG - chr1_4:71656325-71656344 None:intergenic 40.0%
TTCATGTGTGGCACTAACAA+TGG - chr1_4:71656331-71656350 None:intergenic 40.0%
AGGTAGTTGTTAATGCTTGG+TGG + chr1_4:71656398-71656417 Msa0182840:CDS 40.0%
TCTTCTTCCATAAACCTCTC+TGG - chr1_4:71656469-71656488 None:intergenic 40.0%
AATGGAATTGATGCTGTTGC+TGG + chr1_4:71656490-71656509 Msa0182840:CDS 40.0%
!! GTGGAGGGAAAGTTGATTTT+AGG + chr1_4:71656512-71656531 Msa0182840:CDS 40.0%
GGCAATGCAAGTATAATTCC+AGG - chr1_4:71656571-71656590 None:intergenic 40.0%
TGCATTGCCAATATTGGGAT+TGG + chr1_4:71656582-71656601 Msa0182840:CDS 40.0%
!! GGGATTGGTTATTGGAAAGT+TGG + chr1_4:71656597-71656616 Msa0182840:CDS 40.0%
! TTTGAGATGAAGGGTCCAAA+TGG + chr1_4:71656628-71656647 Msa0182840:CDS 40.0%
TTGAGATGAAGGGTCCAAAT+GGG + chr1_4:71656629-71656648 Msa0182840:CDS 40.0%
GAACAAAACAGTAGAGTGGT+TGG - chr1_4:71656704-71656723 None:intergenic 40.0%
GATGGAACAAAACAGTAGAG+TGG - chr1_4:71656708-71656727 None:intergenic 40.0%
AGGTAGGTATGTGTGTTCCA+TGG - chr1_4:71654557-71654576 None:intergenic 45.0%
TATGGGAGAGACACAAGCAA+TGG - chr1_4:71654784-71654803 None:intergenic 45.0%
AGAACTTGTGTGGCAAGGTT+TGG - chr1_4:71655017-71655036 None:intergenic 45.0%
!! CACTGGTAATGGACAAGACA+TGG + chr1_4:71655094-71655113 Msa0182840:CDS 45.0%
TCACTGTCTATGGTGATCAC+TGG + chr1_4:71655120-71655139 Msa0182840:CDS 45.0%
TAGCATGTGGGAACAAGAGA+TGG + chr1_4:71655205-71655224 Msa0182840:CDS 45.0%
! GTGGGAACAAGAGATGGATT+TGG + chr1_4:71655211-71655230 Msa0182840:CDS 45.0%
! TAACTCTGAGAGAAGCCGTT+TGG + chr1_4:71655391-71655410 Msa0182840:CDS 45.0%
GCAAAGACTTGCAAACTAGG+AGG + chr1_4:71655489-71655508 Msa0182840:CDS 45.0%
! CTCAAACGTGTTCTCTGAAG+CGG + chr1_4:71655778-71655797 Msa0182840:intron 45.0%
TATCTCATGCTTCTCCCCAT+TGG - chr1_4:71656023-71656042 None:intergenic 45.0%
AGAGACAACACTATGGTCCA+TGG + chr1_4:71656141-71656160 Msa0182840:CDS 45.0%
CAACACTATGGTCCATGGAA+TGG + chr1_4:71656146-71656165 Msa0182840:CDS 45.0%
AACCTTGAAGAGGCTAAGCT+AGG + chr1_4:71656349-71656368 Msa0182840:CDS 45.0%
!!! TCTGGCTTTTCCCACCATAA+TGG - chr1_4:71656436-71656455 None:intergenic 45.0%
! ATTATGGTGGGAAAAGCCAG+AGG + chr1_4:71656435-71656454 Msa0182840:CDS 45.0%
!! AGGTTTGTGCCATTTGGTGT+TGG + chr1_4:71656532-71656551 Msa0182840:CDS 45.0%
!! TGCCATTTGGTGTTGGAAGA+AGG + chr1_4:71656539-71656558 Msa0182840:CDS 45.0%
CTCCTTCTTCCAACACCAAA+TGG - chr1_4:71656544-71656563 None:intergenic 45.0%
AGGTAGGTATGTGTGTTCCA+TGG - chr1_4:71654557-71654576 None:intergenic 45.0%
TATGGGAGAGACACAAGCAA+TGG - chr1_4:71654784-71654803 None:intergenic 45.0%
AGAACTTGTGTGGCAAGGTT+TGG - chr1_4:71655017-71655036 None:intergenic 45.0%
!! CACTGGTAATGGACAAGACA+TGG + chr1_4:71655094-71655113 Msa0182840:CDS 45.0%
TCACTGTCTATGGTGATCAC+TGG + chr1_4:71655120-71655139 Msa0182840:CDS 45.0%
TAGCATGTGGGAACAAGAGA+TGG + chr1_4:71655205-71655224 Msa0182840:CDS 45.0%
! GTGGGAACAAGAGATGGATT+TGG + chr1_4:71655211-71655230 Msa0182840:CDS 45.0%
! TAACTCTGAGAGAAGCCGTT+TGG + chr1_4:71655391-71655410 Msa0182840:CDS 45.0%
GCAAAGACTTGCAAACTAGG+AGG + chr1_4:71655489-71655508 Msa0182840:CDS 45.0%
! CTCAAACGTGTTCTCTGAAG+CGG + chr1_4:71655778-71655797 Msa0182840:intron 45.0%
TATCTCATGCTTCTCCCCAT+TGG - chr1_4:71656023-71656042 None:intergenic 45.0%
AGAGACAACACTATGGTCCA+TGG + chr1_4:71656141-71656160 Msa0182840:CDS 45.0%
CAACACTATGGTCCATGGAA+TGG + chr1_4:71656146-71656165 Msa0182840:CDS 45.0%
AACCTTGAAGAGGCTAAGCT+AGG + chr1_4:71656349-71656368 Msa0182840:CDS 45.0%
!!! TCTGGCTTTTCCCACCATAA+TGG - chr1_4:71656436-71656455 None:intergenic 45.0%
! ATTATGGTGGGAAAAGCCAG+AGG + chr1_4:71656435-71656454 Msa0182840:CDS 45.0%
!! AGGTTTGTGCCATTTGGTGT+TGG + chr1_4:71656532-71656551 Msa0182840:CDS 45.0%
!! TGCCATTTGGTGTTGGAAGA+AGG + chr1_4:71656539-71656558 Msa0182840:CDS 45.0%
CTCCTTCTTCCAACACCAAA+TGG - chr1_4:71656544-71656563 None:intergenic 45.0%
!! TATATAAATAATAAGATTAT+GGG - chr1_4:71654801-71654820 None:intergenic 5.0%
!! TATATAAATAATAAGATTAT+GGG - chr1_4:71654801-71654820 None:intergenic 5.0%
TATGTTGGGAGTGACGAGGT+AGG - chr1_4:71654573-71654592 None:intergenic 50.0%
GCAATGGAGGTTGAGAGAGA+GGG - chr1_4:71654768-71654787 None:intergenic 50.0%
AGCAATGGAGGTTGAGAGAG+AGG - chr1_4:71654769-71654788 None:intergenic 50.0%
GGAACAGAAAAAGGGCTTGG+AGG - chr1_4:71654867-71654886 None:intergenic 50.0%
CTCTGCTATTGCCCATTCCA+TGG - chr1_4:71656161-71656180 None:intergenic 50.0%
GCCACACATGAACCTTGAAG+AGG + chr1_4:71656339-71656358 Msa0182840:CDS 50.0%
GCCTCTTCAAGGTTCATGTG+TGG - chr1_4:71656343-71656362 None:intergenic 50.0%
CTCCTAGCTTAGCCTCTTCA+AGG - chr1_4:71656354-71656373 None:intergenic 50.0%
GTTCAGGCCAGAGAGGTTTA+TGG + chr1_4:71656459-71656478 Msa0182840:CDS 50.0%
GGAATTGATGCTGTTGCTGG+TGG + chr1_4:71656493-71656512 Msa0182840:CDS 50.0%
ATTGATGCTGTTGCTGGTGG+AGG + chr1_4:71656496-71656515 Msa0182840:CDS 50.0%
TTGATGCTGTTGCTGGTGGA+GGG + chr1_4:71656497-71656516 Msa0182840:CDS 50.0%
GTTGGAAGAAGGAGTTGTCC+TGG + chr1_4:71656550-71656569 Msa0182840:CDS 50.0%
TATGTTGGGAGTGACGAGGT+AGG - chr1_4:71654573-71654592 None:intergenic 50.0%
GCAATGGAGGTTGAGAGAGA+GGG - chr1_4:71654768-71654787 None:intergenic 50.0%
AGCAATGGAGGTTGAGAGAG+AGG - chr1_4:71654769-71654788 None:intergenic 50.0%
GGAACAGAAAAAGGGCTTGG+AGG - chr1_4:71654867-71654886 None:intergenic 50.0%
CTCTGCTATTGCCCATTCCA+TGG - chr1_4:71656161-71656180 None:intergenic 50.0%
GCCACACATGAACCTTGAAG+AGG + chr1_4:71656339-71656358 Msa0182840:CDS 50.0%
GCCTCTTCAAGGTTCATGTG+TGG - chr1_4:71656343-71656362 None:intergenic 50.0%
CTCCTAGCTTAGCCTCTTCA+AGG - chr1_4:71656354-71656373 None:intergenic 50.0%
GTTCAGGCCAGAGAGGTTTA+TGG + chr1_4:71656459-71656478 Msa0182840:CDS 50.0%
GGAATTGATGCTGTTGCTGG+TGG + chr1_4:71656493-71656512 Msa0182840:CDS 50.0%
ATTGATGCTGTTGCTGGTGG+AGG + chr1_4:71656496-71656515 Msa0182840:CDS 50.0%
TTGATGCTGTTGCTGGTGGA+GGG + chr1_4:71656497-71656516 Msa0182840:CDS 50.0%
GTTGGAAGAAGGAGTTGTCC+TGG + chr1_4:71656550-71656569 Msa0182840:CDS 50.0%
GGGAGAGACACAAGCAATGG+AGG - chr1_4:71654781-71654800 None:intergenic 55.0%
CTGAAGCGGTCTCACAAGTG+TGG + chr1_4:71655792-71655811 Msa0182840:intron 55.0%
GGGAAAAGCCAGAGGAGTTC+AGG + chr1_4:71656443-71656462 Msa0182840:CDS 55.0%
GGGAGAGACACAAGCAATGG+AGG - chr1_4:71654781-71654800 None:intergenic 55.0%
CTGAAGCGGTCTCACAAGTG+TGG + chr1_4:71655792-71655811 Msa0182840:intron 55.0%
GGGAAAAGCCAGAGGAGTTC+AGG + chr1_4:71656443-71656462 Msa0182840:CDS 55.0%
CTCTCTGGCCTGAACTCCTC+TGG - chr1_4:71656454-71656473 None:intergenic 60.0%
CAGAGGAGTTCAGGCCAGAG+AGG + chr1_4:71656452-71656471 Msa0182840:CDS 60.0%
CTCTCTGGCCTGAACTCCTC+TGG - chr1_4:71656454-71656473 None:intergenic 60.0%
CAGAGGAGTTCAGGCCAGAG+AGG + chr1_4:71656452-71656471 Msa0182840:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 71654540 71656936 71654540 ID=Msa0182840;Name=Msa0182840
chr1_4 mRNA 71654540 71656936 71654540 ID=Msa0182840-mRNA-1;Parent=Msa0182840;Name=Msa0182840-mRNA-1;_AED=0.01;_eAED=0.01;_QI=135|1|1|1|1|1|2|198|535
chr1_4 exon 71654540 71655549 71654540 ID=Msa0182840-mRNA-1:exon:23967;Parent=Msa0182840-mRNA-1
chr1_4 exon 71656006 71656936 71656006 ID=Msa0182840-mRNA-1:exon:23968;Parent=Msa0182840-mRNA-1
chr1_4 five_prime_UTR 71654540 71654674 71654540 ID=Msa0182840-mRNA-1:five_prime_utr;Parent=Msa0182840-mRNA-1
chr1_4 CDS 71654675 71655549 71654675 ID=Msa0182840-mRNA-1:cds;Parent=Msa0182840-mRNA-1
chr1_4 CDS 71656006 71656738 71656006 ID=Msa0182840-mRNA-1:cds;Parent=Msa0182840-mRNA-1
chr1_4 three_prime_UTR 71656739 71656936 71656739 ID=Msa0182840-mRNA-1:three_prime_utr;Parent=Msa0182840-mRNA-1
Gene Sequence

>Msa0182840

ATGACTCTCCTTCAACTCTCAAAAAAACCAATATTTTTCACTCTTTTTGCAATGCTCATTCCAATAATTACTACAAAACTCTTTTTTACACCCTCTCTCTCAACCTCCATTGCTTGTGTCTCTCCCATAATCTTATTATTTATATACCTAACTCATTCCAATTCAAACAGCCACAAGAAAAATTCTTCACCTCCAAGCCCTTTTTCTGTTCCTATATTTGGAAACTGGCTTCAAGTTGGCAATGATCTCAATCATCGTATGCTTGCATCCATGTCACAAACTTATGGACCACTTTTCCTACTCAAACTTGGTTCCAAAAACTTGGTTGTTGTCTCTGATCCAAACCTTGCCACACAAGTTCTTCATTCACAAGGTGTCGAATTCGGTTCTCGTCCTCGCAACGTTGTCTTTGATATCTTCACTGGTAATGGACAAGACATGGTTTTCACTGTCTATGGTGATCACTGGCGCAAAATGCGAAGAATCATGACATTGCCGTTTTTCACTAACAAAGTTGTCCAAAATTATAGTAGCATGTGGGAACAAGAGATGGATTTGGTAGTTCAAGACCTAAAGGCTAATGACATTGTTAAAAGTGAAGGCATTGTAATTAGAAAACGTCTTCAGCTGATGTTGTATAATATCATGTATAGGATGATGTTTGATGCCAAATTTGAATCTCAAGAAGATCCTTTGTTTATTCAGGCTACAAGGTTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAATATAATTATGGAGATTTTATTCCCTTGCTTAGGCCATTTTTGAGAGGCTACCTTAACAAGTGCAAAGACTTGCAAACTAGGAGGCTTGCATTTTTCAACAACTACTACATTGAGAAGAGGAGAAAAATAATGGCAGCCAATGGGGAGAAGCATGAGATAAACTGTGCAATTGATCATATCATAGATGCTGAGATGAAAGGTGAAATAAGTGAAGATAATGTGACTTACATAGTAGAGAACATTAATGTTGCTGCAATAGAGACAACACTATGGTCCATGGAATGGGCAATAGCAGAGTTAGTGAATCATCCAGAAGTTCAAACCAAAATTCGTGATGAGATATCAAAAGTGCTTAAAGGTGAACAAGTCACAGAATCAAACTTAAACCAATTACCATATTTACAAGCTACATTGAAAGAGATATTGAGATTGCATACACCAATTCCATTGTTAGTGCCACACATGAACCTTGAAGAGGCTAAGCTAGGAGAGTACACTATTCCAAAAGAGTCTAAGGTAGTTGTTAATGCTTGGTGGCTTGCAAATAATCCATTATGGTGGGAAAAGCCAGAGGAGTTCAGGCCAGAGAGGTTTATGGAAGAAGAAAATGGAATTGATGCTGTTGCTGGTGGAGGGAAAGTTGATTTTAGGTTTGTGCCATTTGGTGTTGGAAGAAGGAGTTGTCCTGGAATTATACTTGCATTGCCAATATTGGGATTGGTTATTGGAAAGTTGGTGTCAAATTTTGAGATGAAGGGTCCAAATGGGACAAAGATTGATGTTAGTGAAAAAGGTGGACAATTTAGCTTGCACATTGCCAACCACTCTACTGTTTTGTTCCATCCAATTAATTAG

Protein sequence

>Msa0182840

MTLLQLSKKPIFFTLFAMLIPIITTKLFFTPSLSTSIACVSPIILLFIYLTHSNSNSHKKNSSPPSPFSVPIFGNWLQVGNDLNHRMLASMSQTYGPLFLLKLGSKNLVVVSDPNLATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSSMWEQEMDLVVQDLKANDIVKSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYYIEKRRKIMAANGEKHEINCAIDHIIDAEMKGEISEDNVTYIVENINVAAIETTLWSMEWAIAELVNHPEVQTKIRDEISKVLKGEQVTESNLNQLPYLQATLKEILRLHTPIPLLVPHMNLEEAKLGEYTIPKESKVVVNAWWLANNPLWWEKPEEFRPERFMEEENGIDAVAGGGKVDFRFVPFGVGRRSCPGIILALPILGLVIGKLVSNFEMKGPNGTKIDVSEKGGQFSLHIANHSTVLFHPIN*