Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1439070 | XP_003630349.2 | 88.889 | 144 | 16 | 0 | 1 | 144 | 399 | 542 | 1.30e-81 | 260 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1439070 | sp|Q8W033|AL3I1_ARATH | 55.245 | 143 | 64 | 0 | 2 | 144 | 406 | 548 | 5.21e-52 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1439070 | G7LF15 | 88.889 | 144 | 16 | 0 | 1 | 144 | 399 | 542 | 6.20e-82 | 260 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008850 | Msa1439070 | 0.833760 | 4.431061e-56 | -8.615850e-47 |
Msa0017120 | Msa1439070 | 0.803444 | 3.476514e-49 | -8.615850e-47 |
Msa0020630 | Msa1439070 | 0.841252 | 5.319077e-58 | -8.615850e-47 |
Msa0038310 | Msa1439070 | 0.818448 | 1.949844e-52 | -8.615850e-47 |
Msa0040410 | Msa1439070 | 0.805912 | 1.061500e-49 | -8.615850e-47 |
Msa0040550 | Msa1439070 | -0.843936 | 1.031138e-58 | -8.615850e-47 |
Msa0043240 | Msa1439070 | -0.829341 | 5.434749e-55 | -8.615850e-47 |
Msa0053960 | Msa1439070 | 0.809293 | 2.032607e-50 | -8.615850e-47 |
Msa0054760 | Msa1439070 | 0.811717 | 6.089027e-51 | -8.615850e-47 |
Msa0057740 | Msa1439070 | 0.800240 | 1.581620e-48 | -8.615850e-47 |
Msa0061600 | Msa1439070 | -0.801610 | 8.302274e-49 | -8.615850e-47 |
Msa0064550 | Msa1439070 | 0.833137 | 6.338680e-56 | -8.615850e-47 |
Msa0068410 | Msa1439070 | 0.853086 | 3.014139e-61 | -8.615850e-47 |
Msa0084630 | Msa1439070 | 0.818468 | 1.929245e-52 | -8.615850e-47 |
Msa0084680 | Msa1439070 | 0.806013 | 1.010697e-49 | -8.615850e-47 |
Msa0086090 | Msa1439070 | 0.828429 | 9.035577e-55 | -8.615850e-47 |
Msa0089210 | Msa1439070 | 0.811265 | 7.635038e-51 | -8.615850e-47 |
Msa0094240 | Msa1439070 | 0.807815 | 4.204398e-50 | -8.615850e-47 |
Msa0094670 | Msa1439070 | 0.807547 | 4.792553e-50 | -8.615850e-47 |
Msa0103060 | Msa1439070 | 0.811318 | 7.433131e-51 | -8.615850e-47 |
Msa0106130 | Msa1439070 | -0.800323 | 1.520866e-48 | -8.615850e-47 |
Msa0114240 | Msa1439070 | 0.803922 | 2.766122e-49 | -8.615850e-47 |
Msa0114250 | Msa1439070 | 0.835642 | 1.489626e-56 | -8.615850e-47 |
Msa1349360 | Msa1439070 | 0.807138 | 5.852601e-50 | -8.615850e-47 |
Msa1349810 | Msa1439070 | 0.846289 | 2.384924e-59 | -8.615850e-47 |
Msa1352290 | Msa1439070 | 0.813444 | 2.551577e-51 | -8.615850e-47 |
Msa1356730 | Msa1439070 | 0.816725 | 4.769336e-52 | -8.615850e-47 |
Msa1359620 | Msa1439070 | 0.802522 | 5.390997e-49 | -8.615850e-47 |
Msa1361090 | Msa1439070 | 0.811593 | 6.480121e-51 | -8.615850e-47 |
Msa1361190 | Msa1439070 | 0.825122 | 5.567902e-54 | -8.615850e-47 |
Msa1361200 | Msa1439070 | 0.801806 | 7.569249e-49 | -8.615850e-47 |
Msa1367940 | Msa1439070 | 0.802565 | 5.282767e-49 | -8.615850e-47 |
Msa1368980 | Msa1439070 | 0.816790 | 4.611769e-52 | -8.615850e-47 |
Msa1373910 | Msa1439070 | 0.856955 | 2.266136e-62 | -8.615850e-47 |
Msa1373950 | Msa1439070 | 0.815561 | 8.680870e-52 | -8.615850e-47 |
Msa1376350 | Msa1439070 | 0.804393 | 2.207557e-49 | -8.615850e-47 |
Msa1380720 | Msa1439070 | 0.801517 | 8.672623e-49 | -8.615850e-47 |
Msa1381130 | Msa1439070 | 0.803561 | 3.287134e-49 | -8.615850e-47 |
Msa1384620 | Msa1439070 | 0.821025 | 5.028291e-53 | -8.615850e-47 |
Msa1395580 | Msa1439070 | 0.810144 | 1.333892e-50 | -8.615850e-47 |
Msa1397540 | Msa1439070 | 0.807588 | 4.698457e-50 | -8.615850e-47 |
Msa1400700 | Msa1439070 | -0.859320 | 4.488398e-63 | -8.615850e-47 |
Msa1405770 | Msa1439070 | 0.807894 | 4.044479e-50 | -8.615850e-47 |
Msa1407210 | Msa1439070 | -0.823565 | 1.293535e-53 | -8.615850e-47 |
Msa1418200 | Msa1439070 | 0.833434 | 5.345742e-56 | -8.615850e-47 |
Msa1422890 | Msa1439070 | 0.818085 | 2.355736e-52 | -8.615850e-47 |
Msa1423660 | Msa1439070 | -0.834229 | 3.381653e-56 | -8.615850e-47 |
Msa1425540 | Msa1439070 | 0.803712 | 3.058297e-49 | -8.615850e-47 |
Msa1428420 | Msa1439070 | 0.808613 | 2.841817e-50 | -8.615850e-47 |
Msa1428990 | Msa1439070 | 0.823826 | 1.123914e-53 | -8.615850e-47 |
Msa1434660 | Msa1439070 | 0.802650 | 5.073925e-49 | -8.615850e-47 |
Msa1439070 | Msa1443550 | 0.825061 | 5.756984e-54 | -8.615850e-47 |
Msa1439070 | Msa1447160 | -0.815700 | 8.084375e-52 | -8.615850e-47 |
Msa1439070 | Msa1450420 | 0.804310 | 2.297127e-49 | -8.615850e-47 |
Msa1439070 | Msa1451780 | 0.819585 | 1.074998e-52 | -8.615850e-47 |
Msa1439070 | Msa1458920 | 0.812892 | 3.372738e-51 | -8.615850e-47 |
Msa1439070 | Msa1459540 | 0.808568 | 2.904677e-50 | -8.615850e-47 |
Msa1439070 | Msa1460310 | -0.837480 | 5.070928e-57 | -8.615850e-47 |
Msa1439070 | Msa1462600 | 0.823199 | 1.574894e-53 | -8.615850e-47 |
Msa0605250 | Msa1439070 | 0.813177 | 2.920013e-51 | -8.615850e-47 |
Msa0605620 | Msa1439070 | 0.805266 | 1.450710e-49 | -8.615850e-47 |
Msa0606060 | Msa1439070 | 0.819971 | 8.777100e-53 | -8.615850e-47 |
Msa0607280 | Msa1439070 | 0.809128 | 2.205252e-50 | -8.615850e-47 |
Msa0607300 | Msa1439070 | 0.807102 | 5.955276e-50 | -8.615850e-47 |
Msa0618520 | Msa1439070 | 0.811830 | 5.754297e-51 | -8.615850e-47 |
Msa0619330 | Msa1439070 | 0.835688 | 1.450172e-56 | -8.615850e-47 |
Msa0622250 | Msa1439070 | 0.800654 | 1.302387e-48 | -8.615850e-47 |
Msa0627050 | Msa1439070 | 0.808016 | 3.809276e-50 | -8.615850e-47 |
Msa0633720 | Msa1439070 | 0.801573 | 8.447526e-49 | -8.615850e-47 |
Msa0645820 | Msa1439070 | 0.825760 | 3.932326e-54 | -8.615850e-47 |
Msa0646340 | Msa1439070 | 0.814562 | 1.446250e-51 | -8.615850e-47 |
Msa0646570 | Msa1439070 | 0.812288 | 4.572335e-51 | -8.615850e-47 |
Msa0647000 | Msa1439070 | 0.812041 | 5.174267e-51 | -8.615850e-47 |
Msa0649310 | Msa1439070 | 0.827273 | 1.713524e-54 | -8.615850e-47 |
Msa0650650 | Msa1439070 | 0.855192 | 7.440152e-62 | -8.615850e-47 |
Msa0650740 | Msa1439070 | 0.848500 | 5.893388e-60 | -8.615850e-47 |
Msa0657860 | Msa1439070 | 0.805501 | 1.294774e-49 | -8.615850e-47 |
Msa0659040 | Msa1439070 | 0.803064 | 4.166904e-49 | -8.615850e-47 |
Msa0659520 | Msa1439070 | 0.812143 | 4.917766e-51 | -8.615850e-47 |
Msa0675010 | Msa1439070 | 0.808436 | 3.100713e-50 | -8.615850e-47 |
Msa0676100 | Msa1439070 | 0.811437 | 7.002886e-51 | -8.615850e-47 |
Msa0679780 | Msa1439070 | 0.814639 | 1.390395e-51 | -8.615850e-47 |
Msa0685540 | Msa1439070 | 0.817720 | 2.848287e-52 | -8.615850e-47 |
Msa0686610 | Msa1439070 | 0.819408 | 1.179790e-52 | -8.615850e-47 |
Msa0690350 | Msa1439070 | 0.819236 | 1.291184e-52 | -8.615850e-47 |
Msa0693400 | Msa1439070 | 0.819847 | 9.366990e-53 | -8.615850e-47 |
Msa0698900 | Msa1439070 | 0.801597 | 8.352068e-49 | -8.615850e-47 |
Msa0702070 | Msa1439070 | 0.829094 | 6.239569e-55 | -8.615850e-47 |
Msa0702120 | Msa1439070 | 0.815506 | 8.927348e-52 | -8.615850e-47 |
Msa0702200 | Msa1439070 | 0.826849 | 2.164429e-54 | -8.615850e-47 |
Msa0702620 | Msa1439070 | 0.801770 | 7.696174e-49 | -8.615850e-47 |
Msa0706380 | Msa1439070 | 0.817288 | 3.564475e-52 | -8.615850e-47 |
Msa0707780 | Msa1439070 | 0.824373 | 8.362873e-54 | -8.615850e-47 |
Msa0714600 | Msa1439070 | 0.809912 | 1.496806e-50 | -8.615850e-47 |
Msa0719340 | Msa1439070 | 0.818728 | 1.684892e-52 | -8.615850e-47 |
Msa0725480 | Msa1439070 | -0.805249 | 1.462005e-49 | -8.615850e-47 |
Msa0730180 | Msa1439070 | 0.801834 | 7.466954e-49 | -8.615850e-47 |
Msa0733000 | Msa1439070 | 0.821630 | 3.646112e-53 | -8.615850e-47 |
Msa0740420 | Msa1439070 | 0.800916 | 1.151639e-48 | -8.615850e-47 |
Msa0748980 | Msa1439070 | 0.825242 | 5.216674e-54 | -8.615850e-47 |
Msa0761640 | Msa1439070 | 0.806476 | 8.074172e-50 | -8.615850e-47 |
Msa0766030 | Msa1439070 | 0.805687 | 1.183330e-49 | -8.615850e-47 |
Msa0768490 | Msa1439070 | 0.808656 | 2.782331e-50 | -8.615850e-47 |
Msa0772150 | Msa1439070 | 0.810606 | 1.060280e-50 | -8.615850e-47 |
Msa0772210 | Msa1439070 | 0.817470 | 3.242834e-52 | -8.615850e-47 |
Msa0775580 | Msa1439070 | 0.812603 | 3.901856e-51 | -8.615850e-47 |
Msa0790640 | Msa1439070 | 0.804227 | 2.389736e-49 | -8.615850e-47 |
Msa0792510 | Msa1439070 | 0.828992 | 6.605519e-55 | -8.615850e-47 |
Msa0799710 | Msa1439070 | 0.810171 | 1.316402e-50 | -8.615850e-47 |
Msa0811510 | Msa1439070 | 0.816673 | 4.898510e-52 | -8.615850e-47 |
Msa0812970 | Msa1439070 | 0.813746 | 2.189491e-51 | -8.615850e-47 |
Msa0825520 | Msa1439070 | 0.819880 | 9.206512e-53 | -8.615850e-47 |
Msa0828570 | Msa1439070 | 0.839168 | 1.861962e-57 | -8.615850e-47 |
Msa0829570 | Msa1439070 | 0.810072 | 1.382655e-50 | -8.615850e-47 |
Msa0837990 | Msa1439070 | 0.823195 | 1.578637e-53 | -8.615850e-47 |
Msa0842050 | Msa1439070 | 0.818374 | 2.026445e-52 | -8.615850e-47 |
Msa0130250 | Msa1439070 | 0.806139 | 9.511884e-50 | -8.615850e-47 |
Msa0154240 | Msa1439070 | 0.809832 | 1.557169e-50 | -8.615850e-47 |
Msa0154270 | Msa1439070 | 0.813515 | 2.461968e-51 | -8.615850e-47 |
Msa0155610 | Msa1439070 | 0.811675 | 6.218453e-51 | -8.615850e-47 |
Msa0159750 | Msa1439070 | 0.841474 | 4.648312e-58 | -8.615850e-47 |
Msa0176620 | Msa1439070 | -0.800205 | 1.607159e-48 | -8.615850e-47 |
Msa0178940 | Msa1439070 | 0.811776 | 5.909988e-51 | -8.615850e-47 |
Msa0182310 | Msa1439070 | -0.821244 | 4.476494e-53 | -8.615850e-47 |
Msa0182930 | Msa1439070 | 0.808004 | 3.831929e-50 | -8.615850e-47 |
Msa0185390 | Msa1439070 | 0.809020 | 2.326052e-50 | -8.615850e-47 |
Msa0194570 | Msa1439070 | 0.803650 | 3.150340e-49 | -8.615850e-47 |
Msa0200950 | Msa1439070 | -0.804219 | 2.399843e-49 | -8.615850e-47 |
Msa0202740 | Msa1439070 | 0.805916 | 1.059291e-49 | -8.615850e-47 |
Msa0216210 | Msa1439070 | 0.802130 | 6.493242e-49 | -8.615850e-47 |
Msa0217470 | Msa1439070 | 0.834433 | 3.006765e-56 | -8.615850e-47 |
Msa0222070 | Msa1439070 | 0.803837 | 2.881472e-49 | -8.615850e-47 |
Msa0222120 | Msa1439070 | 0.808761 | 2.642197e-50 | -8.615850e-47 |
Msa0224370 | Msa1439070 | 0.801197 | 1.008698e-48 | -8.615850e-47 |
Msa0224400 | Msa1439070 | 0.805376 | 1.375367e-49 | -8.615850e-47 |
Msa0227490 | Msa1439070 | 0.821931 | 3.105291e-53 | -8.615850e-47 |
Msa0227500 | Msa1439070 | 0.807569 | 4.740092e-50 | -8.615850e-47 |
Msa1226360 | Msa1439070 | 0.807544 | 4.799135e-50 | -8.615850e-47 |
Msa1226600 | Msa1439070 | 0.817836 | 2.681656e-52 | -8.615850e-47 |
Msa1233770 | Msa1439070 | 0.832301 | 1.022040e-55 | -8.615850e-47 |
Msa1237260 | Msa1439070 | 0.814674 | 1.366282e-51 | -8.615850e-47 |
Msa1241820 | Msa1439070 | 0.810724 | 9.997739e-51 | -8.615850e-47 |
Msa1243730 | Msa1439070 | 0.807405 | 5.135752e-50 | -8.615850e-47 |
Msa1245120 | Msa1439070 | -0.808427 | 3.114181e-50 | -8.615850e-47 |
Msa1258280 | Msa1439070 | 0.804995 | 1.652979e-49 | -8.615850e-47 |
Msa1262310 | Msa1439070 | 0.807493 | 4.919484e-50 | -8.615850e-47 |
Msa1263670 | Msa1439070 | 0.800125 | 1.668632e-48 | -8.615850e-47 |
Msa1264560 | Msa1439070 | 0.811537 | 6.662664e-51 | -8.615850e-47 |
Msa1266710 | Msa1439070 | -0.816031 | 6.817681e-52 | -8.615850e-47 |
Msa1272950 | Msa1439070 | 0.825986 | 3.474685e-54 | -8.615850e-47 |
Msa1276080 | Msa1439070 | 0.827165 | 1.819065e-54 | -8.615850e-47 |
Msa1278420 | Msa1439070 | 0.805953 | 1.040795e-49 | -8.615850e-47 |
Msa1293050 | Msa1439070 | 0.812562 | 3.982227e-51 | -8.615850e-47 |
Msa1298740 | Msa1439070 | 0.809805 | 1.577618e-50 | -8.615850e-47 |
Msa1306190 | Msa1439070 | 0.801200 | 1.007368e-48 | -8.615850e-47 |
Msa1306200 | Msa1439070 | 0.841118 | 5.768793e-58 | -8.615850e-47 |
Msa1317030 | Msa1439070 | 0.801191 | 1.011711e-48 | -8.615850e-47 |
Msa1317710 | Msa1439070 | 0.808629 | 2.819708e-50 | -8.615850e-47 |
Msa1323060 | Msa1439070 | 0.802963 | 4.372158e-49 | -8.615850e-47 |
Msa1323160 | Msa1439070 | -0.805607 | 1.230419e-49 | -8.615850e-47 |
Msa1325980 | Msa1439070 | 0.801604 | 8.325536e-49 | -8.615850e-47 |
Msa1326000 | Msa1439070 | 0.815244 | 1.020771e-51 | -8.615850e-47 |
Msa1326400 | Msa1439070 | 0.819771 | 9.750623e-53 | -8.615850e-47 |
Msa1335970 | Msa1439070 | -0.831534 | 1.580578e-55 | -8.615850e-47 |
Msa0377280 | Msa1439070 | 0.839586 | 1.450358e-57 | -8.615850e-47 |
Msa0380430 | Msa1439070 | 0.813786 | 2.145892e-51 | -8.615850e-47 |
Msa0380520 | Msa1439070 | 0.814687 | 1.356859e-51 | -8.615850e-47 |
Msa0380650 | Msa1439070 | 0.801126 | 1.042959e-48 | -8.615850e-47 |
Msa0382500 | Msa1439070 | 0.800416 | 1.456351e-48 | -8.615850e-47 |
Msa0386390 | Msa1439070 | 0.809725 | 1.641550e-50 | -8.615850e-47 |
Msa0388200 | Msa1439070 | 0.801158 | 1.027524e-48 | -8.615850e-47 |
Msa0389060 | Msa1439070 | 0.837954 | 3.832429e-57 | -8.615850e-47 |
Msa0392050 | Msa1439070 | 0.829120 | 6.147017e-55 | -8.615850e-47 |
Msa0393140 | Msa1439070 | 0.804479 | 2.118333e-49 | -8.615850e-47 |
Msa0401340 | Msa1439070 | 0.852886 | 3.438209e-61 | -8.615850e-47 |
Msa0404690 | Msa1439070 | 0.840895 | 6.599269e-58 | -8.615850e-47 |
Msa0413180 | Msa1439070 | 0.811439 | 6.997193e-51 | -8.615850e-47 |
Msa0413740 | Msa1439070 | 0.823071 | 1.687422e-53 | -8.615850e-47 |
Msa0416540 | Msa1439070 | 0.801107 | 1.052639e-48 | -8.615850e-47 |
Msa0423600 | Msa1439070 | 0.813914 | 2.010436e-51 | -8.615850e-47 |
Msa0427740 | Msa1439070 | -0.823055 | 1.702129e-53 | -8.615850e-47 |
Msa0427970 | Msa1439070 | -0.824583 | 7.460851e-54 | -8.615850e-47 |
Msa0430020 | Msa1439070 | 0.822042 | 2.927425e-53 | -8.615850e-47 |
Msa0433670 | Msa1439070 | 0.803398 | 3.553116e-49 | -8.615850e-47 |
Msa0440310 | Msa1439070 | 0.801209 | 1.003213e-48 | -8.615850e-47 |
Msa0448080 | Msa1439070 | 0.825028 | 5.859901e-54 | -8.615850e-47 |
Msa0448120 | Msa1439070 | 0.860976 | 1.418916e-63 | -8.615850e-47 |
Msa0450460 | Msa1439070 | 0.804115 | 2.522493e-49 | -8.615850e-47 |
Msa0458110 | Msa1439070 | 0.815349 | 9.674022e-52 | -8.615850e-47 |
Msa0458790 | Msa1439070 | 0.831329 | 1.775435e-55 | -8.615850e-47 |
Msa0462590 | Msa1439070 | 0.824536 | 7.652803e-54 | -8.615850e-47 |
Msa0463020 | Msa1439070 | 0.805308 | 1.421036e-49 | -8.615850e-47 |
Msa0466100 | Msa1439070 | 0.805932 | 1.051137e-49 | -8.615850e-47 |
Msa0467920 | Msa1439070 | -0.804070 | 2.576405e-49 | -8.615850e-47 |
Msa0469950 | Msa1439070 | 0.830472 | 2.880849e-55 | -8.615850e-47 |
Msa0471090 | Msa1439070 | 0.803602 | 3.223788e-49 | -8.615850e-47 |
Msa0475740 | Msa1439070 | 0.807309 | 5.383965e-50 | -8.615850e-47 |
Msa0479790 | Msa1439070 | 0.810236 | 1.274539e-50 | -8.615850e-47 |
Msa0984000 | Msa1439070 | 0.808661 | 2.775127e-50 | -8.615850e-47 |
Msa1002040 | Msa1439070 | 0.815709 | 8.045125e-52 | -8.615850e-47 |
Msa1004210 | Msa1439070 | 0.826480 | 2.650546e-54 | -8.615850e-47 |
Msa1014350 | Msa1439070 | 0.849589 | 2.934676e-60 | -8.615850e-47 |
Msa1016150 | Msa1439070 | 0.801703 | 7.945700e-49 | -8.615850e-47 |
Msa1016670 | Msa1439070 | 0.817917 | 2.571809e-52 | -8.615850e-47 |
Msa1026880 | Msa1439070 | 0.821311 | 4.319748e-53 | -8.615850e-47 |
Msa1033160 | Msa1439070 | 0.818014 | 2.444820e-52 | -8.615850e-47 |
Msa1036250 | Msa1439070 | 0.801892 | 7.265235e-49 | -8.615850e-47 |
Msa1036350 | Msa1439070 | 0.844176 | 8.889605e-59 | -8.615850e-47 |
Msa1037060 | Msa1439070 | -0.866004 | 3.914533e-65 | -8.615850e-47 |
Msa1038320 | Msa1439070 | 0.824381 | 8.326389e-54 | -8.615850e-47 |
Msa1040730 | Msa1439070 | -0.821378 | 4.168429e-53 | -8.615850e-47 |
Msa1044040 | Msa1439070 | 0.810484 | 1.126442e-50 | -8.615850e-47 |
Msa1046610 | Msa1439070 | 0.811250 | 7.689368e-51 | -8.615850e-47 |
Msa1055360 | Msa1439070 | 0.843067 | 1.759390e-58 | -8.615850e-47 |
Msa1061130 | Msa1439070 | 0.820795 | 5.677651e-53 | -8.615850e-47 |
Msa1061520 | Msa1439070 | 0.812293 | 4.559078e-51 | -8.615850e-47 |
Msa1064210 | Msa1439070 | 0.816937 | 4.274642e-52 | -8.615850e-47 |
Msa1067910 | Msa1439070 | 0.821593 | 3.717546e-53 | -8.615850e-47 |
Msa1076520 | Msa1439070 | 0.812452 | 4.209679e-51 | -8.615850e-47 |
Msa1076630 | Msa1439070 | 0.822328 | 2.512744e-53 | -8.615850e-47 |
Msa1077940 | Msa1439070 | -0.837315 | 5.589199e-57 | -8.615850e-47 |
Msa1082150 | Msa1439070 | 0.838879 | 2.211822e-57 | -8.615850e-47 |
Msa1093390 | Msa1439070 | 0.855772 | 5.040852e-62 | -8.615850e-47 |
Msa1096280 | Msa1439070 | 0.829969 | 3.823407e-55 | -8.615850e-47 |
Msa1102540 | Msa1439070 | 0.813471 | 2.517054e-51 | -8.615850e-47 |
Msa1106560 | Msa1439070 | 0.805704 | 1.173709e-49 | -8.615850e-47 |
Msa1106830 | Msa1439070 | 0.800028 | 1.746663e-48 | -8.615850e-47 |
Msa0242290 | Msa1439070 | 0.814772 | 1.299350e-51 | -8.615850e-47 |
Msa0258670 | Msa1439070 | -0.820527 | 6.544013e-53 | -8.615850e-47 |
Msa0259980 | Msa1439070 | 0.803367 | 3.606334e-49 | -8.615850e-47 |
Msa0260190 | Msa1439070 | 0.817600 | 3.031233e-52 | -8.615850e-47 |
Msa0263620 | Msa1439070 | 0.806457 | 8.151400e-50 | -8.615850e-47 |
Msa0264940 | Msa1439070 | -0.836065 | 1.163794e-56 | -8.615850e-47 |
Msa0265580 | Msa1439070 | 0.843841 | 1.093351e-58 | -8.615850e-47 |
Msa0282170 | Msa1439070 | 0.803258 | 3.797993e-49 | -8.615850e-47 |
Msa0283680 | Msa1439070 | 0.818337 | 2.066311e-52 | -8.615850e-47 |
Msa0288240 | Msa1439070 | 0.822135 | 2.784786e-53 | -8.615850e-47 |
Msa0296610 | Msa1439070 | 0.818600 | 1.801143e-52 | -8.615850e-47 |
Msa0297950 | Msa1439070 | -0.847486 | 1.122167e-59 | -8.615850e-47 |
Msa0298940 | Msa1439070 | 0.804418 | 2.181307e-49 | -8.615850e-47 |
Msa0301180 | Msa1439070 | 0.821472 | 3.965821e-53 | -8.615850e-47 |
Msa0302990 | Msa1439070 | -0.838798 | 2.321210e-57 | -8.615850e-47 |
Msa0303440 | Msa1439070 | 0.847608 | 1.038208e-59 | -8.615850e-47 |
Msa0303500 | Msa1439070 | 0.842364 | 2.704824e-58 | -8.615850e-47 |
Msa0312570 | Msa1439070 | 0.804951 | 1.688345e-49 | -8.615850e-47 |
Msa0312780 | Msa1439070 | 0.805539 | 1.271436e-49 | -8.615850e-47 |
Msa0314790 | Msa1439070 | 0.807245 | 5.553918e-50 | -8.615850e-47 |
Msa0314980 | Msa1439070 | 0.811156 | 8.059326e-51 | -8.615850e-47 |
Msa0320540 | Msa1439070 | 0.837743 | 4.341234e-57 | -8.615850e-47 |
Msa0333900 | Msa1439070 | 0.820175 | 7.878608e-53 | -8.615850e-47 |
Msa0334020 | Msa1439070 | 0.816849 | 4.472085e-52 | -8.615850e-47 |
Msa0334980 | Msa1439070 | 0.809972 | 1.452915e-50 | -8.615850e-47 |
Msa0335890 | Msa1439070 | -0.861450 | 1.017459e-63 | -8.615850e-47 |
Msa0336270 | Msa1439070 | 0.846370 | 2.266948e-59 | -8.615850e-47 |
Msa0339860 | Msa1439070 | 0.803350 | 3.635918e-49 | -8.615850e-47 |
Msa0344070 | Msa1439070 | 0.813523 | 2.451993e-51 | -8.615850e-47 |
Msa0344680 | Msa1439070 | 0.825871 | 3.699945e-54 | -8.615850e-47 |
Msa0354390 | Msa1439070 | 0.857334 | 1.751651e-62 | -8.615850e-47 |
Msa0357380 | Msa1439070 | 0.809782 | 1.596110e-50 | -8.615850e-47 |
Msa1113210 | Msa1439070 | 0.820850 | 5.516202e-53 | -8.615850e-47 |
Msa1116010 | Msa1439070 | 0.801645 | 8.167664e-49 | -8.615850e-47 |
Msa1130070 | Msa1439070 | 0.811437 | 7.005904e-51 | -8.615850e-47 |
Msa1130650 | Msa1439070 | 0.803009 | 4.276325e-49 | -8.615850e-47 |
Msa1133660 | Msa1439070 | 0.840525 | 8.253596e-58 | -8.615850e-47 |
Msa1134560 | Msa1439070 | 0.807902 | 4.028151e-50 | -8.615850e-47 |
Msa1140010 | Msa1439070 | 0.802590 | 5.218633e-49 | -8.615850e-47 |
Msa1144730 | Msa1439070 | 0.830081 | 3.588732e-55 | -8.615850e-47 |
Msa1151820 | Msa1439070 | 0.804832 | 1.787407e-49 | -8.615850e-47 |
Msa1157030 | Msa1439070 | 0.812207 | 4.761761e-51 | -8.615850e-47 |
Msa1161160 | Msa1439070 | 0.810798 | 9.634761e-51 | -8.615850e-47 |
Msa1164800 | Msa1439070 | -0.864574 | 1.102600e-64 | -8.615850e-47 |
Msa1173380 | Msa1439070 | 0.814134 | 1.798367e-51 | -8.615850e-47 |
Msa1177240 | Msa1439070 | 0.806336 | 8.643345e-50 | -8.615850e-47 |
Msa1177620 | Msa1439070 | 0.835738 | 1.408790e-56 | -8.615850e-47 |
Msa1182800 | Msa1439070 | 0.817309 | 3.526420e-52 | -8.615850e-47 |
Msa1182830 | Msa1439070 | 0.849981 | 2.280258e-60 | -8.615850e-47 |
Msa1193400 | Msa1439070 | 0.805223 | 1.480559e-49 | -8.615850e-47 |
Msa1207480 | Msa1439070 | -0.801202 | 1.006382e-48 | -8.615850e-47 |
Msa1211390 | Msa1439070 | 0.809724 | 1.642378e-50 | -8.615850e-47 |
Msa1214900 | Msa1439070 | 0.810955 | 8.912721e-51 | -8.615850e-47 |
Msa1219780 | Msa1439070 | -0.834422 | 3.025757e-56 | -8.615850e-47 |
Msa1220740 | Msa1439070 | 0.801022 | 1.095223e-48 | -8.615850e-47 |
Msa1221570 | Msa1439070 | -0.813937 | 1.987781e-51 | -8.615850e-47 |
Msa1222030 | Msa1439070 | -0.853620 | 2.118847e-61 | -8.615850e-47 |
Msa1223460 | Msa1439070 | 0.804081 | 2.563936e-49 | -8.615850e-47 |
Msa0487490 | Msa1439070 | 0.823612 | 1.261216e-53 | -8.615850e-47 |
Msa0504730 | Msa1439070 | 0.803360 | 3.618323e-49 | -8.615850e-47 |
Msa0505390 | Msa1439070 | 0.823432 | 1.389504e-53 | -8.615850e-47 |
Msa0514330 | Msa1439070 | -0.812221 | 4.728609e-51 | -8.615850e-47 |
Msa0518570 | Msa1439070 | -0.822508 | 2.282237e-53 | -8.615850e-47 |
Msa0521570 | Msa1439070 | 0.801553 | 8.528681e-49 | -8.615850e-47 |
Msa0524120 | Msa1439070 | 0.809741 | 1.628582e-50 | -8.615850e-47 |
Msa0530340 | Msa1439070 | 0.801632 | 8.217596e-49 | -8.615850e-47 |
Msa0542010 | Msa1439070 | 0.801672 | 8.060942e-49 | -8.615850e-47 |
Msa0545230 | Msa1439070 | 0.821672 | 3.565191e-53 | -8.615850e-47 |
Msa0546740 | Msa1439070 | 0.811911 | 5.523589e-51 | -8.615850e-47 |
Msa0550110 | Msa1439070 | 0.808247 | 3.401644e-50 | -8.615850e-47 |
Msa0553520 | Msa1439070 | 0.818290 | 2.117347e-52 | -8.615850e-47 |
Msa0568600 | Msa1439070 | 0.811069 | 8.419225e-51 | -8.615850e-47 |
Msa0568610 | Msa1439070 | 0.823554 | 1.301568e-53 | -8.615850e-47 |
Msa0570680 | Msa1439070 | 0.806326 | 8.687078e-50 | -8.615850e-47 |
Msa0574170 | Msa1439070 | 0.809159 | 2.171601e-50 | -8.615850e-47 |
Msa0576420 | Msa1439070 | 0.828676 | 7.874353e-55 | -8.615850e-47 |
Msa0577050 | Msa1439070 | 0.800128 | 1.666406e-48 | -8.615850e-47 |
Msa0579340 | Msa1439070 | 0.842671 | 2.242673e-58 | -8.615850e-47 |
Msa0584280 | Msa1439070 | 0.821647 | 3.611891e-53 | -8.615850e-47 |
Msa0589600 | Msa1439070 | 0.807102 | 5.953660e-50 | -8.615850e-47 |
Msa0595780 | Msa1439070 | 0.812089 | 5.051232e-51 | -8.615850e-47 |
Msa0598250 | Msa1439070 | 0.820947 | 5.239111e-53 | -8.615850e-47 |
Msa0600820 | Msa1439070 | 0.803406 | 3.540278e-49 | -8.615850e-47 |
Msa0851740 | Msa1439070 | 0.815129 | 1.082802e-51 | -8.615850e-47 |
Msa0853480 | Msa1439070 | 0.804592 | 2.006031e-49 | -8.615850e-47 |
Msa0864730 | Msa1439070 | 0.820198 | 7.786632e-53 | -8.615850e-47 |
Msa0864750 | Msa1439070 | 0.819440 | 1.159919e-52 | -8.615850e-47 |
Msa0882700 | Msa1439070 | 0.805942 | 1.046138e-49 | -8.615850e-47 |
Msa0899700 | Msa1439070 | 0.806490 | 8.022555e-50 | -8.615850e-47 |
Msa0903730 | Msa1439070 | 0.801161 | 1.025957e-48 | -8.615850e-47 |
Msa0922340 | Msa1439070 | 0.802960 | 4.378251e-49 | -8.615850e-47 |
Msa0925160 | Msa1439070 | 0.800362 | 1.493628e-48 | -8.615850e-47 |
Msa0936690 | Msa1439070 | 0.803245 | 3.822853e-49 | -8.615850e-47 |
Msa0944690 | Msa1439070 | 0.828765 | 7.495511e-55 | -8.615850e-47 |
Msa0964680 | Msa1439070 | 0.808044 | 3.756785e-50 | -8.615850e-47 |
Msa0971860 | Msa1439070 | 0.809897 | 1.507660e-50 | -8.615850e-47 |
Msa0973230 | Msa1439070 | 0.804368 | 2.234246e-49 | -8.615850e-47 |
Msa0973890 | Msa1439070 | 0.806683 | 7.302866e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1439070 | MtrunA17_Chr8g0384741 | 88.889 | 144 | 16 | 0 | 1 | 144 | 399 | 542 | 1.19e-85 | 260 |
Msa1439070 | MtrunA17_Chr3g0124811 | 49.650 | 143 | 72 | 0 | 1 | 143 | 348 | 490 | 2.28e-48 | 162 |
Msa1439070 | MtrunA17_Chr2g0328781 | 41.429 | 140 | 82 | 0 | 2 | 141 | 354 | 493 | 5.28e-30 | 112 |
Msa1439070 | MtrunA17_Chr8g0372381 | 41.007 | 139 | 82 | 0 | 2 | 140 | 340 | 478 | 1.09e-29 | 112 |
Msa1439070 | MtrunA17_Chr4g0032441 | 44.531 | 128 | 71 | 0 | 2 | 129 | 339 | 466 | 2.03e-29 | 111 |
Msa1439070 | MtrunA17_Chr1g0159811 | 45.669 | 127 | 45 | 4 | 1 | 103 | 346 | 472 | 6.26e-28 | 107 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1439070 | AT4G34240.3 | 55.245 | 143 | 64 | 0 | 2 | 144 | 264 | 406 | 7.64e-54 | 174 |
Msa1439070 | AT4G34240.4 | 55.245 | 143 | 64 | 0 | 2 | 144 | 391 | 533 | 3.97e-53 | 176 |
Msa1439070 | AT4G34240.1 | 55.245 | 143 | 64 | 0 | 2 | 144 | 406 | 548 | 5.29e-53 | 176 |
Msa1439070 | AT1G44170.3 | 48.252 | 143 | 74 | 0 | 1 | 143 | 279 | 421 | 9.37e-47 | 156 |
Msa1439070 | AT1G44170.1 | 48.252 | 143 | 74 | 0 | 1 | 143 | 342 | 484 | 3.48e-46 | 156 |
Msa1439070 | AT1G44170.2 | 48.252 | 143 | 74 | 0 | 1 | 143 | 342 | 484 | 3.48e-46 | 156 |
Msa1439070 | AT4G36250.1 | 42.657 | 143 | 82 | 0 | 2 | 144 | 342 | 484 | 9.57e-32 | 117 |
Find 52 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTATGCAAGAGGAGATATT+TGG | 0.197595 | tig0028698:-53154 | Msa1439070:CDS |
GATTGCTCCAACTATCTTAT+TGG | 0.199481 | tig0028698:-53197 | Msa1439070:five_prime_UTR |
ACAGTAATAATTGGCAAAAT+TGG | 0.249721 | tig0028698:+53130 | None:intergenic |
GCAACTCGTGGTTTGCCTTT+TGG | 0.266266 | tig0028698:-52288 | Msa1439070:CDS |
TATATAAAACTGATTTCTTA+TGG | 0.269097 | tig0028698:+52205 | None:intergenic |
ATAAATTTATTCACAGTGAT+TGG | 0.311303 | tig0028698:+51930 | None:intergenic |
ATGGTACTCACAGTAATAAT+TGG | 0.320472 | tig0028698:+53121 | None:intergenic |
GGTATCAGACAAAATTGTTT+AGG | 0.335599 | tig0028698:-53353 | Msa1439070:five_prime_UTR |
CAGATAATTCTTGCTTTGCT+TGG | 0.345687 | tig0028698:-52090 | Msa1439070:CDS |
ATTCACAGTGATTGGGCCTC+TGG | 0.347371 | tig0028698:+51938 | None:intergenic |
TAATTCTTGCTTTGCTTGGA+TGG | 0.383020 | tig0028698:-52086 | Msa1439070:CDS |
TGTATATGGAGGGTACCTTA+TGG | 0.386947 | tig0028698:+52161 | None:intergenic |
TATGTGGACAAGATATCTTC+TGG | 0.414474 | tig0028698:-52927 | Msa1439070:CDS |
TAAATTTATTCACAGTGATT+GGG | 0.421081 | tig0028698:+51931 | None:intergenic |
AGATATGCAGCCAAAGGCTT+TGG | 0.424118 | tig0028698:+52981 | None:intergenic |
AAAATCAAGGCCAAAGCCTT+TGG | 0.435468 | tig0028698:-52991 | Msa1439070:CDS |
AGAGTTGGAGAAAGTGGAAT+GGG | 0.441960 | tig0028698:-52263 | Msa1439070:CDS |
TTATGCAAGAGGAGATATTT+GGG | 0.457790 | tig0028698:-53153 | Msa1439070:CDS |
GAAACTCTTGAATGAGGATA+AGG | 0.463840 | tig0028698:-53374 | Msa1439070:five_prime_UTR |
TTGGAGAGAGTTGGAGAAAG+TGG | 0.478831 | tig0028698:-52269 | Msa1439070:CDS |
CACGAGTCGTGCTATTGAGT+TGG | 0.482693 | tig0028698:+53377 | None:intergenic |
TATCAGTCTCTGATCTCTGA+TGG | 0.485074 | tig0028698:-52030 | Msa1439070:three_prime_UTR |
TTGATTCCGATCCATCCATA+AGG | 0.489103 | tig0028698:-52176 | Msa1439070:CDS |
TCCTTCTCAGGTGTATATGG+AGG | 0.493263 | tig0028698:+52150 | None:intergenic |
CCTTCTCAGGTGTATATGGA+GGG | 0.495634 | tig0028698:+52151 | None:intergenic |
GGAACATCCAATAAGATAGT+TGG | 0.497071 | tig0028698:+53190 | None:intergenic |
GAGAGTTGGAGAAAGTGGAA+TGG | 0.507177 | tig0028698:-52264 | Msa1439070:CDS |
ATCAGTCTCTGATCTCTGAT+GGG | 0.511456 | tig0028698:-52029 | Msa1439070:three_prime_UTR |
AAACAATGAGCAACTGAAGA+AGG | 0.517946 | tig0028698:-52952 | Msa1439070:CDS |
ATCAGACAAAATTGTTTAGG+AGG | 0.520290 | tig0028698:-53350 | Msa1439070:five_prime_UTR |
AGTGGAATGGGTTGCTACCA+TGG | 0.521895 | tig0028698:-52251 | Msa1439070:CDS |
TTTCTCCAACTCTCTCCAAA+AGG | 0.522943 | tig0028698:+52273 | None:intergenic |
GGATGTTCCACAAGAAGCTA+TGG | 0.525082 | tig0028698:-53176 | Msa1439070:exon |
TGCATAACCATAGCTTCTTG+TGG | 0.525176 | tig0028698:+53169 | None:intergenic |
TATGGAGGGTACCTTATGGA+TGG | 0.573766 | tig0028698:+52165 | None:intergenic |
GCTTTAGTATAATAAAATCA+AGG | 0.574080 | tig0028698:-53004 | Msa1439070:CDS |
AGAAGCTATGGTTATGCAAG+AGG | 0.586940 | tig0028698:-53164 | Msa1439070:exon |
GCAACTGAAGAAGGATTATG+TGG | 0.588911 | tig0028698:-52943 | Msa1439070:CDS |
TTTGTAAGGTTGAGGACCAG+AGG | 0.589148 | tig0028698:-51954 | Msa1439070:three_prime_UTR |
CCCTCCATATACACCTGAGA+AGG | 0.591816 | tig0028698:-52151 | Msa1439070:CDS |
AGGGTACCTTATGGATGGAT+CGG | 0.593890 | tig0028698:+52170 | None:intergenic |
AAAATTGTTTAGGAGGTCAG+AGG | 0.602545 | tig0028698:-53343 | Msa1439070:five_prime_UTR |
TTGGTGCAGGTTGCAACTCG+TGG | 0.603431 | tig0028698:-52300 | Msa1439070:intron |
CTATCAAAGAGAACTTTCCA+TGG | 0.605714 | tig0028698:+52234 | None:intergenic |
GTGAAGAGATATGCAGCCAA+AGG | 0.606873 | tig0028698:+52975 | None:intergenic |
ACTCGTGAAACTCTTGAATG+AGG | 0.610650 | tig0028698:-53380 | Msa1439070:five_prime_UTR |
AAATTGTTTAGGAGGTCAGA+GGG | 0.611808 | tig0028698:-53342 | Msa1439070:five_prime_UTR |
TGGACAAGATATCTTCTGGA+GGG | 0.613322 | tig0028698:-52923 | Msa1439070:CDS |
GTGGACAAGATATCTTCTGG+AGG | 0.652280 | tig0028698:-52924 | Msa1439070:CDS |
GGTCTAAATGATGATGTGCA+AGG | 0.655883 | tig0028698:-52065 | Msa1439070:exon |
GTCTAAATGATGATGTGCAA+GGG | 0.657116 | tig0028698:-52064 | Msa1439070:exon |
TCAGTCTCTGATCTCTGATG+GGG | 0.664207 | tig0028698:-52028 | Msa1439070:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATAAAACTGATTTCTTA+TGG | + | tig0028698:53131-53150 | None:intergenic | 15.0% |
!!! | TATATAAAACTGATTTCTTA+TGG | + | tig0028698:53131-53150 | None:intergenic | 15.0% |
!! | GCTTTAGTATAATAAAATCA+AGG | - | tig0028698:52329-52348 | Msa1439070:intron | 20.0% |
!! | TTTCATAAATCTATTGTTCT+CGG | - | tig0028698:52528-52547 | Msa1439070:intron | 20.0% |
!! | TTCTCAAATTATTATTGTTG+TGG | + | tig0028698:52833-52852 | None:intergenic | 20.0% |
!! | AACCTTACAAAAAAAAATGT+AGG | + | tig0028698:53370-53389 | None:intergenic | 20.0% |
!! | TAAATTTATTCACAGTGATT+GGG | + | tig0028698:53405-53424 | None:intergenic | 20.0% |
!! | ATAAATTTATTCACAGTGAT+TGG | + | tig0028698:53406-53425 | None:intergenic | 20.0% |
!! | GCTTTAGTATAATAAAATCA+AGG | - | tig0028698:52329-52348 | Msa1439070:intron | 20.0% |
!! | TTTCATAAATCTATTGTTCT+CGG | - | tig0028698:52528-52547 | Msa1439070:intron | 20.0% |
!! | TTCTCAAATTATTATTGTTG+TGG | + | tig0028698:52833-52852 | None:intergenic | 20.0% |
!! | AACCTTACAAAAAAAAATGT+AGG | + | tig0028698:53370-53389 | None:intergenic | 20.0% |
!! | TAAATTTATTCACAGTGATT+GGG | + | tig0028698:53405-53424 | None:intergenic | 20.0% |
!! | ATAAATTTATTCACAGTGAT+TGG | + | tig0028698:53406-53425 | None:intergenic | 20.0% |
! | ACAGTAATAATTGGCAAAAT+TGG | + | tig0028698:52206-52225 | None:intergenic | 25.0% |
!!! | AACATTTACTTTTCCCTTTA+TGG | + | tig0028698:52234-52253 | None:intergenic | 25.0% |
! | TAATCCCTTAATTTCATCAA+AGG | - | tig0028698:52666-52685 | Msa1439070:intron | 25.0% |
! | TCTACCTTTGATGAAATTAA+GGG | + | tig0028698:52673-52692 | None:intergenic | 25.0% |
! | TTCTACCTTTGATGAAATTA+AGG | + | tig0028698:52674-52693 | None:intergenic | 25.0% |
!! | TTACGATCTAAATTTTGTAC+AGG | - | tig0028698:52734-52753 | Msa1439070:intron | 25.0% |
! | AAATATCACATTGACACATT+TGG | - | tig0028698:52868-52887 | Msa1439070:intron | 25.0% |
! | ATGTAGTACATATCTATGTA+TGG | - | tig0028698:52947-52966 | Msa1439070:CDS | 25.0% |
! | TCATGTCTATATCTTACATT+TGG | + | tig0028698:52978-52997 | None:intergenic | 25.0% |
!! | TGAGAAGGAAAAAATTTTGA+GGG | - | tig0028698:53197-53216 | Msa1439070:five_prime_UTR | 25.0% |
! | AAAAATATTGCCACCAAAAA+TGG | + | tig0028698:53223-53242 | None:intergenic | 25.0% |
!!! | CTCCTACATTTTTTTTTGTA+AGG | - | tig0028698:53365-53384 | Msa1439070:five_prime_UTR | 25.0% |
!!! | CATTTTTTTTTGTAAGGTTG+AGG | - | tig0028698:53371-53390 | Msa1439070:five_prime_UTR | 25.0% |
! | ACAGTAATAATTGGCAAAAT+TGG | + | tig0028698:52206-52225 | None:intergenic | 25.0% |
!!! | AACATTTACTTTTCCCTTTA+TGG | + | tig0028698:52234-52253 | None:intergenic | 25.0% |
! | TAATCCCTTAATTTCATCAA+AGG | - | tig0028698:52666-52685 | Msa1439070:intron | 25.0% |
! | TCTACCTTTGATGAAATTAA+GGG | + | tig0028698:52673-52692 | None:intergenic | 25.0% |
! | TTCTACCTTTGATGAAATTA+AGG | + | tig0028698:52674-52693 | None:intergenic | 25.0% |
!! | TTACGATCTAAATTTTGTAC+AGG | - | tig0028698:52734-52753 | Msa1439070:intron | 25.0% |
! | AAATATCACATTGACACATT+TGG | - | tig0028698:52868-52887 | Msa1439070:intron | 25.0% |
! | ATGTAGTACATATCTATGTA+TGG | - | tig0028698:52947-52966 | Msa1439070:CDS | 25.0% |
! | TCATGTCTATATCTTACATT+TGG | + | tig0028698:52978-52997 | None:intergenic | 25.0% |
!! | TGAGAAGGAAAAAATTTTGA+GGG | - | tig0028698:53197-53216 | Msa1439070:five_prime_UTR | 25.0% |
! | AAAAATATTGCCACCAAAAA+TGG | + | tig0028698:53223-53242 | None:intergenic | 25.0% |
!!! | CTCCTACATTTTTTTTTGTA+AGG | - | tig0028698:53365-53384 | Msa1439070:five_prime_UTR | 25.0% |
!!! | CATTTTTTTTTGTAAGGTTG+AGG | - | tig0028698:53371-53390 | Msa1439070:five_prime_UTR | 25.0% |
GGTATCAGACAAAATTGTTT+AGG | - | tig0028698:51999-52018 | Msa1439070:three_prime_UTR | 30.0% | |
ATCAGACAAAATTGTTTAGG+AGG | - | tig0028698:52002-52021 | Msa1439070:three_prime_UTR | 30.0% | |
TCCATCTTGGTTATAAAGAT+TGG | - | tig0028698:52059-52078 | Msa1439070:exon | 30.0% | |
TCCAATCTTTATAACCAAGA+TGG | + | tig0028698:52063-52082 | None:intergenic | 30.0% | |
TTATGCAAGAGGAGATATTT+GGG | - | tig0028698:52180-52199 | Msa1439070:CDS | 30.0% | |
ATGGTACTCACAGTAATAAT+TGG | + | tig0028698:52215-52234 | None:intergenic | 30.0% | |
TATTACTGTGAGTACCATAA+AGG | - | tig0028698:52217-52236 | Msa1439070:CDS | 30.0% | |
ATTACTGTGAGTACCATAAA+GGG | - | tig0028698:52218-52237 | Msa1439070:CDS | 30.0% | |
TACTACATTTGATGAATGAG+AGG | + | tig0028698:52935-52954 | None:intergenic | 30.0% | |
GTAAGATATAGACATGATGA+TGG | - | tig0028698:52981-53000 | Msa1439070:CDS | 30.0% | |
ACTTGTTTGTACAACAATGT+TGG | - | tig0028698:53014-53033 | Msa1439070:CDS | 30.0% | |
!!! | CTCAAAATTTTTTCCTTCTC+AGG | + | tig0028698:53198-53217 | None:intergenic | 30.0% |
! | CTGAGAAGGAAAAAATTTTG+AGG | - | tig0028698:53196-53215 | Msa1439070:five_prime_UTR | 30.0% |
!! | AAAATTTTGAGGGCCATTTT+TGG | - | tig0028698:53207-53226 | Msa1439070:intron | 30.0% |
ACAAAAAAAAATGTAGGAGC+AGG | + | tig0028698:53364-53383 | None:intergenic | 30.0% | |
GGTATCAGACAAAATTGTTT+AGG | - | tig0028698:51999-52018 | Msa1439070:three_prime_UTR | 30.0% | |
ATCAGACAAAATTGTTTAGG+AGG | - | tig0028698:52002-52021 | Msa1439070:three_prime_UTR | 30.0% | |
TCCATCTTGGTTATAAAGAT+TGG | - | tig0028698:52059-52078 | Msa1439070:exon | 30.0% | |
TCCAATCTTTATAACCAAGA+TGG | + | tig0028698:52063-52082 | None:intergenic | 30.0% | |
TTATGCAAGAGGAGATATTT+GGG | - | tig0028698:52180-52199 | Msa1439070:CDS | 30.0% | |
ATGGTACTCACAGTAATAAT+TGG | + | tig0028698:52215-52234 | None:intergenic | 30.0% | |
TATTACTGTGAGTACCATAA+AGG | - | tig0028698:52217-52236 | Msa1439070:CDS | 30.0% | |
ATTACTGTGAGTACCATAAA+GGG | - | tig0028698:52218-52237 | Msa1439070:CDS | 30.0% | |
TACTACATTTGATGAATGAG+AGG | + | tig0028698:52935-52954 | None:intergenic | 30.0% | |
GTAAGATATAGACATGATGA+TGG | - | tig0028698:52981-53000 | Msa1439070:CDS | 30.0% | |
ACTTGTTTGTACAACAATGT+TGG | - | tig0028698:53014-53033 | Msa1439070:CDS | 30.0% | |
!!! | CTCAAAATTTTTTCCTTCTC+AGG | + | tig0028698:53198-53217 | None:intergenic | 30.0% |
! | CTGAGAAGGAAAAAATTTTG+AGG | - | tig0028698:53196-53215 | Msa1439070:five_prime_UTR | 30.0% |
!! | AAAATTTTGAGGGCCATTTT+TGG | - | tig0028698:53207-53226 | Msa1439070:intron | 30.0% |
ACAAAAAAAAATGTAGGAGC+AGG | + | tig0028698:53364-53383 | None:intergenic | 30.0% | |
GAAACTCTTGAATGAGGATA+AGG | - | tig0028698:51978-51997 | Msa1439070:three_prime_UTR | 35.0% | |
AAAATTGTTTAGGAGGTCAG+AGG | - | tig0028698:52009-52028 | Msa1439070:three_prime_UTR | 35.0% | |
AAATTGTTTAGGAGGTCAGA+GGG | - | tig0028698:52010-52029 | Msa1439070:three_prime_UTR | 35.0% | |
AAGAGGGAGAATTGATGTTA+TGG | + | tig0028698:52106-52125 | None:intergenic | 35.0% | |
GATTGCTCCAACTATCTTAT+TGG | - | tig0028698:52136-52155 | Msa1439070:CDS | 35.0% | |
GGAACATCCAATAAGATAGT+TGG | + | tig0028698:52146-52165 | None:intergenic | 35.0% | |
GTTATGCAAGAGGAGATATT+TGG | - | tig0028698:52179-52198 | Msa1439070:CDS | 35.0% | |
! | TCTTTTCCTCACATTTTTGC+AGG | - | tig0028698:52288-52307 | Msa1439070:CDS | 35.0% |
AAACAATGAGCAACTGAAGA+AGG | - | tig0028698:52381-52400 | Msa1439070:intron | 35.0% | |
TATGTGGACAAGATATCTTC+TGG | - | tig0028698:52406-52425 | Msa1439070:intron | 35.0% | |
ATCAGTAGACAGAAAAGGAA+AGG | - | tig0028698:52559-52578 | Msa1439070:intron | 35.0% | |
TCAAAGGTAGAAACATATGC+AGG | - | tig0028698:52682-52701 | Msa1439070:intron | 35.0% | |
CTATCAAAGAGAACTTTCCA+TGG | + | tig0028698:53102-53121 | None:intergenic | 35.0% | |
! | TTTTCCTTCTCAGGTGTATA+TGG | + | tig0028698:53189-53208 | None:intergenic | 35.0% |
CAGATAATTCTTGCTTTGCT+TGG | - | tig0028698:53243-53262 | Msa1439070:intron | 35.0% | |
TAATTCTTGCTTTGCTTGGA+TGG | - | tig0028698:53247-53266 | Msa1439070:intron | 35.0% | |
! | GTCTAAATGATGATGTGCAA+GGG | - | tig0028698:53269-53288 | Msa1439070:intron | 35.0% |
GAAACTCTTGAATGAGGATA+AGG | - | tig0028698:51978-51997 | Msa1439070:three_prime_UTR | 35.0% | |
AAAATTGTTTAGGAGGTCAG+AGG | - | tig0028698:52009-52028 | Msa1439070:three_prime_UTR | 35.0% | |
AAATTGTTTAGGAGGTCAGA+GGG | - | tig0028698:52010-52029 | Msa1439070:three_prime_UTR | 35.0% | |
AAGAGGGAGAATTGATGTTA+TGG | + | tig0028698:52106-52125 | None:intergenic | 35.0% | |
GATTGCTCCAACTATCTTAT+TGG | - | tig0028698:52136-52155 | Msa1439070:CDS | 35.0% | |
GGAACATCCAATAAGATAGT+TGG | + | tig0028698:52146-52165 | None:intergenic | 35.0% | |
GTTATGCAAGAGGAGATATT+TGG | - | tig0028698:52179-52198 | Msa1439070:CDS | 35.0% | |
! | TCTTTTCCTCACATTTTTGC+AGG | - | tig0028698:52288-52307 | Msa1439070:CDS | 35.0% |
AAACAATGAGCAACTGAAGA+AGG | - | tig0028698:52381-52400 | Msa1439070:intron | 35.0% | |
TATGTGGACAAGATATCTTC+TGG | - | tig0028698:52406-52425 | Msa1439070:intron | 35.0% | |
ATCAGTAGACAGAAAAGGAA+AGG | - | tig0028698:52559-52578 | Msa1439070:intron | 35.0% | |
TCAAAGGTAGAAACATATGC+AGG | - | tig0028698:52682-52701 | Msa1439070:intron | 35.0% | |
CTATCAAAGAGAACTTTCCA+TGG | + | tig0028698:53102-53121 | None:intergenic | 35.0% | |
! | TTTTCCTTCTCAGGTGTATA+TGG | + | tig0028698:53189-53208 | None:intergenic | 35.0% |
CAGATAATTCTTGCTTTGCT+TGG | - | tig0028698:53243-53262 | Msa1439070:intron | 35.0% | |
TAATTCTTGCTTTGCTTGGA+TGG | - | tig0028698:53247-53266 | Msa1439070:intron | 35.0% | |
! | GTCTAAATGATGATGTGCAA+GGG | - | tig0028698:53269-53288 | Msa1439070:intron | 35.0% |
ACTCGTGAAACTCTTGAATG+AGG | - | tig0028698:51972-51991 | Msa1439070:three_prime_UTR | 40.0% | |
GTGAGTTTGCATTTCCATCT+TGG | - | tig0028698:52046-52065 | Msa1439070:three_prime_UTR | 40.0% | |
TGCATAACCATAGCTTCTTG+TGG | + | tig0028698:52167-52186 | None:intergenic | 40.0% | |
AGAAGCTATGGTTATGCAAG+AGG | - | tig0028698:52169-52188 | Msa1439070:CDS | 40.0% | |
TGTCTACCTGCAAAAATGTG+AGG | + | tig0028698:52297-52316 | None:intergenic | 40.0% | |
AAAATCAAGGCCAAAGCCTT+TGG | - | tig0028698:52342-52361 | Msa1439070:intron | 40.0% | |
GCAACTGAAGAAGGATTATG+TGG | - | tig0028698:52390-52409 | Msa1439070:intron | 40.0% | |
TGGACAAGATATCTTCTGGA+GGG | - | tig0028698:52410-52429 | Msa1439070:intron | 40.0% | |
GTTGCATCAGTAGACAGAAA+AGG | - | tig0028698:52554-52573 | Msa1439070:intron | 40.0% | |
TTGTACAACAATGTTGGTGC+AGG | - | tig0028698:53020-53039 | Msa1439070:CDS | 40.0% | |
TTTCTCCAACTCTCTCCAAA+AGG | + | tig0028698:53063-53082 | None:intergenic | 40.0% | |
AGAGTTGGAGAAAGTGGAAT+GGG | - | tig0028698:53070-53089 | Msa1439070:intron | 40.0% | |
TTGATTCCGATCCATCCATA+AGG | - | tig0028698:53157-53176 | Msa1439070:CDS | 40.0% | |
!! | TGTATATGGAGGGTACCTTA+TGG | + | tig0028698:53175-53194 | None:intergenic | 40.0% |
!!! | ATTTTGAGGGCCATTTTTGG+TGG | - | tig0028698:53210-53229 | Msa1439070:intron | 40.0% |
! | GGTCTAAATGATGATGTGCA+AGG | - | tig0028698:53268-53287 | Msa1439070:intron | 40.0% |
TATCAGTCTCTGATCTCTGA+TGG | - | tig0028698:53303-53322 | Msa1439070:intron | 40.0% | |
ATCAGTCTCTGATCTCTGAT+GGG | - | tig0028698:53304-53323 | Msa1439070:intron | 40.0% | |
! | GATGGGGTGTGTTTTTCTAT+AGG | - | tig0028698:53321-53340 | Msa1439070:five_prime_UTR | 40.0% |
ACTCGTGAAACTCTTGAATG+AGG | - | tig0028698:51972-51991 | Msa1439070:three_prime_UTR | 40.0% | |
GTGAGTTTGCATTTCCATCT+TGG | - | tig0028698:52046-52065 | Msa1439070:three_prime_UTR | 40.0% | |
TGCATAACCATAGCTTCTTG+TGG | + | tig0028698:52167-52186 | None:intergenic | 40.0% | |
AGAAGCTATGGTTATGCAAG+AGG | - | tig0028698:52169-52188 | Msa1439070:CDS | 40.0% | |
TGTCTACCTGCAAAAATGTG+AGG | + | tig0028698:52297-52316 | None:intergenic | 40.0% | |
AAAATCAAGGCCAAAGCCTT+TGG | - | tig0028698:52342-52361 | Msa1439070:intron | 40.0% | |
GCAACTGAAGAAGGATTATG+TGG | - | tig0028698:52390-52409 | Msa1439070:intron | 40.0% | |
TGGACAAGATATCTTCTGGA+GGG | - | tig0028698:52410-52429 | Msa1439070:intron | 40.0% | |
GTTGCATCAGTAGACAGAAA+AGG | - | tig0028698:52554-52573 | Msa1439070:intron | 40.0% | |
TTGTACAACAATGTTGGTGC+AGG | - | tig0028698:53020-53039 | Msa1439070:CDS | 40.0% | |
TTTCTCCAACTCTCTCCAAA+AGG | + | tig0028698:53063-53082 | None:intergenic | 40.0% | |
AGAGTTGGAGAAAGTGGAAT+GGG | - | tig0028698:53070-53089 | Msa1439070:intron | 40.0% | |
TTGATTCCGATCCATCCATA+AGG | - | tig0028698:53157-53176 | Msa1439070:CDS | 40.0% | |
!! | TGTATATGGAGGGTACCTTA+TGG | + | tig0028698:53175-53194 | None:intergenic | 40.0% |
!!! | ATTTTGAGGGCCATTTTTGG+TGG | - | tig0028698:53210-53229 | Msa1439070:intron | 40.0% |
! | GGTCTAAATGATGATGTGCA+AGG | - | tig0028698:53268-53287 | Msa1439070:intron | 40.0% |
TATCAGTCTCTGATCTCTGA+TGG | - | tig0028698:53303-53322 | Msa1439070:intron | 40.0% | |
ATCAGTCTCTGATCTCTGAT+GGG | - | tig0028698:53304-53323 | Msa1439070:intron | 40.0% | |
! | GATGGGGTGTGTTTTTCTAT+AGG | - | tig0028698:53321-53340 | Msa1439070:five_prime_UTR | 40.0% |
ATTCTCCCTCTTTGTGCAGA+AGG | - | tig0028698:52114-52133 | Msa1439070:CDS | 45.0% | |
GCAATCCTTCTGCACAAAGA+GGG | + | tig0028698:52122-52141 | None:intergenic | 45.0% | |
AGCAATCCTTCTGCACAAAG+AGG | + | tig0028698:52123-52142 | None:intergenic | 45.0% | |
GGATGTTCCACAAGAAGCTA+TGG | - | tig0028698:52157-52176 | Msa1439070:CDS | 45.0% | |
AGATATGCAGCCAAAGGCTT+TGG | + | tig0028698:52355-52374 | None:intergenic | 45.0% | |
GTGAAGAGATATGCAGCCAA+AGG | + | tig0028698:52361-52380 | None:intergenic | 45.0% | |
GTGGACAAGATATCTTCTGG+AGG | - | tig0028698:52409-52428 | Msa1439070:intron | 45.0% | |
GTCGAGTGACTGTGTTTCAT+AGG | + | tig0028698:52789-52808 | None:intergenic | 45.0% | |
TGAAACACAGTCACTCGACA+CGG | - | tig0028698:52790-52809 | Msa1439070:intron | 45.0% | |
!! | GTTTGCCTTTTGGAGAGAGT+TGG | - | tig0028698:53055-53074 | Msa1439070:intron | 45.0% |
TTGGAGAGAGTTGGAGAAAG+TGG | - | tig0028698:53064-53083 | Msa1439070:intron | 45.0% | |
GAGAGTTGGAGAAAGTGGAA+TGG | - | tig0028698:53069-53088 | Msa1439070:intron | 45.0% | |
! | AGGGTACCTTATGGATGGAT+CGG | + | tig0028698:53166-53185 | None:intergenic | 45.0% |
!! | TATGGAGGGTACCTTATGGA+TGG | + | tig0028698:53171-53190 | None:intergenic | 45.0% |
CCTTCTCAGGTGTATATGGA+GGG | + | tig0028698:53185-53204 | None:intergenic | 45.0% | |
TCCTTCTCAGGTGTATATGG+AGG | + | tig0028698:53186-53205 | None:intergenic | 45.0% | |
TCAGTCTCTGATCTCTGATG+GGG | - | tig0028698:53305-53324 | Msa1439070:intron | 45.0% | |
TTTGTAAGGTTGAGGACCAG+AGG | - | tig0028698:53379-53398 | Msa1439070:five_prime_UTR | 45.0% | |
ATTCTCCCTCTTTGTGCAGA+AGG | - | tig0028698:52114-52133 | Msa1439070:CDS | 45.0% | |
GCAATCCTTCTGCACAAAGA+GGG | + | tig0028698:52122-52141 | None:intergenic | 45.0% | |
AGCAATCCTTCTGCACAAAG+AGG | + | tig0028698:52123-52142 | None:intergenic | 45.0% | |
GGATGTTCCACAAGAAGCTA+TGG | - | tig0028698:52157-52176 | Msa1439070:CDS | 45.0% | |
AGATATGCAGCCAAAGGCTT+TGG | + | tig0028698:52355-52374 | None:intergenic | 45.0% | |
GTGAAGAGATATGCAGCCAA+AGG | + | tig0028698:52361-52380 | None:intergenic | 45.0% | |
GTGGACAAGATATCTTCTGG+AGG | - | tig0028698:52409-52428 | Msa1439070:intron | 45.0% | |
GTCGAGTGACTGTGTTTCAT+AGG | + | tig0028698:52789-52808 | None:intergenic | 45.0% | |
TGAAACACAGTCACTCGACA+CGG | - | tig0028698:52790-52809 | Msa1439070:intron | 45.0% | |
!! | GTTTGCCTTTTGGAGAGAGT+TGG | - | tig0028698:53055-53074 | Msa1439070:intron | 45.0% |
TTGGAGAGAGTTGGAGAAAG+TGG | - | tig0028698:53064-53083 | Msa1439070:intron | 45.0% | |
GAGAGTTGGAGAAAGTGGAA+TGG | - | tig0028698:53069-53088 | Msa1439070:intron | 45.0% | |
! | AGGGTACCTTATGGATGGAT+CGG | + | tig0028698:53166-53185 | None:intergenic | 45.0% |
!! | TATGGAGGGTACCTTATGGA+TGG | + | tig0028698:53171-53190 | None:intergenic | 45.0% |
CCTTCTCAGGTGTATATGGA+GGG | + | tig0028698:53185-53204 | None:intergenic | 45.0% | |
TCCTTCTCAGGTGTATATGG+AGG | + | tig0028698:53186-53205 | None:intergenic | 45.0% | |
TCAGTCTCTGATCTCTGATG+GGG | - | tig0028698:53305-53324 | Msa1439070:intron | 45.0% | |
TTTGTAAGGTTGAGGACCAG+AGG | - | tig0028698:53379-53398 | Msa1439070:five_prime_UTR | 45.0% | |
! | CACGAGTCGTGCTATTGAGT+TGG | + | tig0028698:51959-51978 | None:intergenic | 50.0% |
!! | GCAACTCGTGGTTTGCCTTT+TGG | - | tig0028698:53045-53064 | Msa1439070:intron | 50.0% |
!! | AGTGGAATGGGTTGCTACCA+TGG | - | tig0028698:53082-53101 | Msa1439070:intron | 50.0% |
CCCTCCATATACACCTGAGA+AGG | - | tig0028698:53182-53201 | Msa1439070:five_prime_UTR | 50.0% | |
ATTCACAGTGATTGGGCCTC+TGG | + | tig0028698:53398-53417 | None:intergenic | 50.0% | |
! | CACGAGTCGTGCTATTGAGT+TGG | + | tig0028698:51959-51978 | None:intergenic | 50.0% |
!! | GCAACTCGTGGTTTGCCTTT+TGG | - | tig0028698:53045-53064 | Msa1439070:intron | 50.0% |
!! | AGTGGAATGGGTTGCTACCA+TGG | - | tig0028698:53082-53101 | Msa1439070:intron | 50.0% |
CCCTCCATATACACCTGAGA+AGG | - | tig0028698:53182-53201 | Msa1439070:five_prime_UTR | 50.0% | |
ATTCACAGTGATTGGGCCTC+TGG | + | tig0028698:53398-53417 | None:intergenic | 50.0% | |
TTGGTGCAGGTTGCAACTCG+TGG | - | tig0028698:53033-53052 | Msa1439070:intron | 55.0% | |
TTGGTGCAGGTTGCAACTCG+TGG | - | tig0028698:53033-53052 | Msa1439070:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0028698 | gene | 51921 | 53434 | 51921 | ID=Msa1439070;Name=Msa1439070 |
tig0028698 | mRNA | 51921 | 53434 | 51921 | ID=Msa1439070-mRNA-1;Parent=Msa1439070;Name=Msa1439070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|1|1|0.66|0.75|4|156|144 |
tig0028698 | exon | 51921 | 52313 | 51921 | ID=Msa1439070-mRNA-1:exon:11583;Parent=Msa1439070-mRNA-1 |
tig0028698 | exon | 52896 | 53045 | 52896 | ID=Msa1439070-mRNA-1:exon:11582;Parent=Msa1439070-mRNA-1 |
tig0028698 | exon | 53132 | 53222 | 53132 | ID=Msa1439070-mRNA-1:exon:11581;Parent=Msa1439070-mRNA-1 |
tig0028698 | exon | 53310 | 53434 | 53310 | ID=Msa1439070-mRNA-1:exon:11580;Parent=Msa1439070-mRNA-1 |
tig0028698 | five_prime_UTR | 53310 | 53434 | 53310 | ID=Msa1439070-mRNA-1:five_prime_utr;Parent=Msa1439070-mRNA-1 |
tig0028698 | five_prime_UTR | 53180 | 53222 | 53180 | ID=Msa1439070-mRNA-1:five_prime_utr;Parent=Msa1439070-mRNA-1 |
tig0028698 | CDS | 53132 | 53179 | 53132 | ID=Msa1439070-mRNA-1:cds;Parent=Msa1439070-mRNA-1 |
tig0028698 | CDS | 52896 | 53045 | 52896 | ID=Msa1439070-mRNA-1:cds;Parent=Msa1439070-mRNA-1 |
tig0028698 | CDS | 52077 | 52313 | 52077 | ID=Msa1439070-mRNA-1:cds;Parent=Msa1439070-mRNA-1 |
tig0028698 | three_prime_UTR | 51921 | 52076 | 51921 | ID=Msa1439070-mRNA-1:three_prime_utr;Parent=Msa1439070-mRNA-1 |
Gene Sequence |
Protein sequence |