Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096860 | sp|Q8GWQ2|AHL20_ARATH | 61.486 | 296 | 92 | 7 | 1 | 289 | 1 | 281 | 2.86e-103 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096860 | A0A072VM41 | 97.241 | 290 | 7 | 1 | 1 | 289 | 33 | 322 | 0.0 | 562 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0096860 | 0.811241 | 7.726884e-51 | -8.615850e-47 |
| Msa0011510 | Msa0096860 | 0.802811 | 4.698687e-49 | -8.615850e-47 |
| Msa0021870 | Msa0096860 | 0.812440 | 4.234521e-51 | -8.615850e-47 |
| Msa0027860 | Msa0096860 | 0.806878 | 6.642382e-50 | -8.615850e-47 |
| Msa0031650 | Msa0096860 | 0.826144 | 3.187332e-54 | -8.615850e-47 |
| Msa0038010 | Msa0096860 | 0.841951 | 3.479447e-58 | -8.615850e-47 |
| Msa0046390 | Msa0096860 | 0.804186 | 2.437554e-49 | -8.615850e-47 |
| Msa0048950 | Msa0096860 | 0.810708 | 1.007615e-50 | -8.615850e-47 |
| Msa0054760 | Msa0096860 | -0.802854 | 4.603197e-49 | -8.615850e-47 |
| Msa0059880 | Msa0096860 | 0.819474 | 1.139651e-52 | -8.615850e-47 |
| Msa0078160 | Msa0096860 | -0.802264 | 6.092612e-49 | -8.615850e-47 |
| Msa0080010 | Msa0096860 | 0.956575 | 2.134158e-114 | -8.615850e-47 |
| Msa0085110 | Msa0096860 | 0.801907 | 7.214833e-49 | -8.615850e-47 |
| Msa0085710 | Msa0096860 | 0.808638 | 2.807625e-50 | -8.615850e-47 |
| Msa0093530 | Msa0096860 | 0.802386 | 5.751138e-49 | -8.615850e-47 |
| Msa0096860 | Msa0126960 | 0.804968 | 1.674142e-49 | -8.615850e-47 |
| Msa0096860 | Msa0129270 | 0.803156 | 3.986755e-49 | -8.615850e-47 |
| Msa0096860 | Msa0129850 | 0.800273 | 1.557036e-48 | -8.615850e-47 |
| Msa0096860 | Msa0132250 | 0.846709 | 1.831421e-59 | -8.615850e-47 |
| Msa0096860 | Msa0144000 | 0.801640 | 8.185239e-49 | -8.615850e-47 |
| Msa0096860 | Msa0150910 | 0.830349 | 3.088291e-55 | -8.615850e-47 |
| Msa0096860 | Msa0154750 | 0.934402 | 4.269179e-96 | -8.615850e-47 |
| Msa0096860 | Msa0160580 | 0.813476 | 2.511343e-51 | -8.615850e-47 |
| Msa0096860 | Msa0168010 | 0.804491 | 2.105548e-49 | -8.615850e-47 |
| Msa0096860 | Msa0171740 | 0.822367 | 2.459880e-53 | -8.615850e-47 |
| Msa0096860 | Msa0175060 | 0.828183 | 1.035897e-54 | -8.615850e-47 |
| Msa0096860 | Msa0176620 | 0.800198 | 1.612830e-48 | -8.615850e-47 |
| Msa0096860 | Msa0177550 | 0.816921 | 4.309839e-52 | -8.615850e-47 |
| Msa0096860 | Msa0189150 | -0.801369 | 9.301277e-49 | -8.615850e-47 |
| Msa0096860 | Msa0219810 | 0.838239 | 3.236073e-57 | -8.615850e-47 |
| Msa0096860 | Msa0223050 | 0.811687 | 6.182118e-51 | -8.615850e-47 |
| Msa0096860 | Msa0230920 | 0.812894 | 3.369060e-51 | -8.615850e-47 |
| Msa0096860 | Msa0234120 | 0.809464 | 1.867847e-50 | -8.615850e-47 |
| Msa0096860 | Msa0245660 | 0.812776 | 3.575363e-51 | -8.615850e-47 |
| Msa0096860 | Msa0258280 | -0.803554 | 3.298715e-49 | -8.615850e-47 |
| Msa0096860 | Msa0264220 | 0.817995 | 2.469106e-52 | -8.615850e-47 |
| Msa0096860 | Msa0266640 | 0.805727 | 1.160883e-49 | -8.615850e-47 |
| Msa0096860 | Msa0278940 | 0.813230 | 2.843839e-51 | -8.615850e-47 |
| Msa0096860 | Msa0278950 | 0.825093 | 5.657280e-54 | -8.615850e-47 |
| Msa0096860 | Msa0297320 | -0.817674 | 2.916835e-52 | -8.615850e-47 |
| Msa0096860 | Msa0302220 | 0.809983 | 1.444905e-50 | -8.615850e-47 |
| Msa0096860 | Msa0356200 | 0.810071 | 1.383070e-50 | -8.615850e-47 |
| Msa0096860 | Msa0356380 | 0.800040 | 1.736683e-48 | -8.615850e-47 |
| Msa0096860 | Msa0356410 | 0.804246 | 2.368121e-49 | -8.615850e-47 |
| Msa0096860 | Msa0361700 | 0.822639 | 2.127342e-53 | -8.615850e-47 |
| Msa0096860 | Msa0374040 | 0.801493 | 8.775041e-49 | -8.615850e-47 |
| Msa0096860 | Msa0375550 | 0.801277 | 9.716285e-49 | -8.615850e-47 |
| Msa0096860 | Msa0409490 | 0.806305 | 8.772831e-50 | -8.615850e-47 |
| Msa0096860 | Msa0414480 | 0.843930 | 1.034805e-58 | -8.615850e-47 |
| Msa0096860 | Msa0424300 | 0.811592 | 6.481689e-51 | -8.615850e-47 |
| Msa0096860 | Msa0433090 | 0.800991 | 1.111228e-48 | -8.615850e-47 |
| Msa0096860 | Msa0444400 | 0.811876 | 5.621782e-51 | -8.615850e-47 |
| Msa0096860 | Msa0464310 | 0.833965 | 3.938312e-56 | -8.615850e-47 |
| Msa0096860 | Msa0471210 | 0.808031 | 3.782237e-50 | -8.615850e-47 |
| Msa0096860 | Msa0515830 | -0.815674 | 8.190646e-52 | -8.615850e-47 |
| Msa0096860 | Msa0515930 | 0.811460 | 6.924880e-51 | -8.615850e-47 |
| Msa0096860 | Msa0531030 | 0.811328 | 7.395371e-51 | -8.615850e-47 |
| Msa0096860 | Msa0531040 | 0.823429 | 1.391544e-53 | -8.615850e-47 |
| Msa0096860 | Msa0531080 | 0.821982 | 3.021953e-53 | -8.615850e-47 |
| Msa0096860 | Msa0532660 | 0.807436 | 5.059836e-50 | -8.615850e-47 |
| Msa0096860 | Msa0533510 | 0.807384 | 5.189491e-50 | -8.615850e-47 |
| Msa0096860 | Msa0535570 | 0.832451 | 9.384534e-56 | -8.615850e-47 |
| Msa0096860 | Msa0538440 | 0.817904 | 2.588170e-52 | -8.615850e-47 |
| Msa0096860 | Msa0538450 | 0.823311 | 1.483277e-53 | -8.615850e-47 |
| Msa0096860 | Msa0538520 | 0.825026 | 5.866858e-54 | -8.615850e-47 |
| Msa0096860 | Msa0538530 | 0.800563 | 1.359390e-48 | -8.615850e-47 |
| Msa0096860 | Msa0540640 | 0.807782 | 4.273090e-50 | -8.615850e-47 |
| Msa0096860 | Msa0545680 | 0.812306 | 4.531508e-51 | -8.615850e-47 |
| Msa0096860 | Msa0549170 | 0.828277 | 9.830859e-55 | -8.615850e-47 |
| Msa0096860 | Msa0554660 | 0.809925 | 1.487033e-50 | -8.615850e-47 |
| Msa0096860 | Msa0568920 | 0.830013 | 3.729122e-55 | -8.615850e-47 |
| Msa0096860 | Msa0587730 | 0.833892 | 4.108002e-56 | -8.615850e-47 |
| Msa0096860 | Msa0587930 | 0.812793 | 3.544753e-51 | -8.615850e-47 |
| Msa0096860 | Msa0589720 | 0.809473 | 1.859432e-50 | -8.615850e-47 |
| Msa0096860 | Msa0589740 | 0.824601 | 7.388138e-54 | -8.615850e-47 |
| Msa0096860 | Msa0589750 | 0.806136 | 9.523207e-50 | -8.615850e-47 |
| Msa0096860 | Msa0591490 | 0.834792 | 2.442275e-56 | -8.615850e-47 |
| Msa0096860 | Msa0594330 | 0.821813 | 3.306207e-53 | -8.615850e-47 |
| Msa0096860 | Msa0597800 | 0.800885 | 1.168169e-48 | -8.615850e-47 |
| Msa0096860 | Msa0601400 | 0.833508 | 5.121751e-56 | -8.615850e-47 |
| Msa0096860 | Msa0604280 | 0.813901 | 2.024298e-51 | -8.615850e-47 |
| Msa0096860 | Msa0623750 | 0.809828 | 1.560059e-50 | -8.615850e-47 |
| Msa0096860 | Msa0624260 | -0.801189 | 1.012702e-48 | -8.615850e-47 |
| Msa0096860 | Msa0629720 | 0.801857 | 7.386104e-49 | -8.615850e-47 |
| Msa0096860 | Msa0630130 | 0.816174 | 6.335942e-52 | -8.615850e-47 |
| Msa0096860 | Msa0631700 | 0.831777 | 1.376923e-55 | -8.615850e-47 |
| Msa0096860 | Msa0634290 | 0.815541 | 8.771361e-52 | -8.615850e-47 |
| Msa0096860 | Msa0640290 | 0.817223 | 3.685511e-52 | -8.615850e-47 |
| Msa0096860 | Msa0641700 | 0.808898 | 2.470169e-50 | -8.615850e-47 |
| Msa0096860 | Msa0643230 | 0.803315 | 3.695856e-49 | -8.615850e-47 |
| Msa0096860 | Msa0643840 | 0.816748 | 4.712949e-52 | -8.615850e-47 |
| Msa0096860 | Msa0655370 | 0.800109 | 1.681480e-48 | -8.615850e-47 |
| Msa0096860 | Msa0659230 | 0.813931 | 1.993418e-51 | -8.615850e-47 |
| Msa0096860 | Msa0667600 | 0.802321 | 5.928830e-49 | -8.615850e-47 |
| Msa0096860 | Msa0667620 | 0.802854 | 4.603645e-49 | -8.615850e-47 |
| Msa0096860 | Msa0668220 | 0.804905 | 1.725874e-49 | -8.615850e-47 |
| Msa0096860 | Msa0670360 | 0.846221 | 2.488669e-59 | -8.615850e-47 |
| Msa0096860 | Msa0672780 | 0.806447 | 8.189787e-50 | -8.615850e-47 |
| Msa0096860 | Msa0678620 | 0.804854 | 1.769174e-49 | -8.615850e-47 |
| Msa0096860 | Msa0680460 | 0.802702 | 4.948255e-49 | -8.615850e-47 |
| Msa0096860 | Msa0689840 | 0.834352 | 3.149506e-56 | -8.615850e-47 |
| Msa0096860 | Msa0708840 | -0.811996 | 5.294405e-51 | -8.615850e-47 |
| Msa0096860 | Msa0711240 | 0.835508 | 1.610994e-56 | -8.615850e-47 |
| Msa0096860 | Msa0715260 | 0.816636 | 4.992716e-52 | -8.615850e-47 |
| Msa0096860 | Msa0716600 | 0.830630 | 2.635952e-55 | -8.615850e-47 |
| Msa0096860 | Msa0716980 | 0.808685 | 2.743256e-50 | -8.615850e-47 |
| Msa0096860 | Msa0727480 | 0.805520 | 1.282997e-49 | -8.615850e-47 |
| Msa0096860 | Msa0728520 | 0.801881 | 7.303239e-49 | -8.615850e-47 |
| Msa0096860 | Msa0735340 | 0.812121 | 4.972156e-51 | -8.615850e-47 |
| Msa0096860 | Msa0743370 | 0.804969 | 1.673538e-49 | -8.615850e-47 |
| Msa0096860 | Msa0753410 | 0.803904 | 2.790630e-49 | -8.615850e-47 |
| Msa0096860 | Msa0757240 | 0.817038 | 4.055884e-52 | -8.615850e-47 |
| Msa0096860 | Msa0758000 | 0.825845 | 3.753715e-54 | -8.615850e-47 |
| Msa0096860 | Msa0758150 | 0.823953 | 1.049023e-53 | -8.615850e-47 |
| Msa0096860 | Msa0766540 | -0.807503 | 4.896710e-50 | -8.615850e-47 |
| Msa0096860 | Msa0768670 | 0.813166 | 2.936446e-51 | -8.615850e-47 |
| Msa0096860 | Msa0776340 | 0.807385 | 5.186241e-50 | -8.615850e-47 |
| Msa0096860 | Msa0776540 | 0.804992 | 1.655330e-49 | -8.615850e-47 |
| Msa0096860 | Msa0777210 | 0.819150 | 1.350568e-52 | -8.615850e-47 |
| Msa0096860 | Msa0787860 | 0.825186 | 5.378629e-54 | -8.615850e-47 |
| Msa0096860 | Msa0792330 | 0.809011 | 2.335782e-50 | -8.615850e-47 |
| Msa0096860 | Msa0795330 | 0.806745 | 7.084818e-50 | -8.615850e-47 |
| Msa0096860 | Msa0797950 | 0.800667 | 1.294174e-48 | -8.615850e-47 |
| Msa0096860 | Msa0798230 | 0.815818 | 7.605689e-52 | -8.615850e-47 |
| Msa0096860 | Msa0813840 | 0.803229 | 3.852049e-49 | -8.615850e-47 |
| Msa0096860 | Msa0814350 | 0.833037 | 6.711066e-56 | -8.615850e-47 |
| Msa0096860 | Msa0814660 | 0.808146 | 3.574179e-50 | -8.615850e-47 |
| Msa0096860 | Msa0816140 | 0.815966 | 7.049311e-52 | -8.615850e-47 |
| Msa0096860 | Msa0817100 | 0.828872 | 7.061867e-55 | -8.615850e-47 |
| Msa0096860 | Msa0824850 | 0.818959 | 1.492964e-52 | -8.615850e-47 |
| Msa0096860 | Msa0824860 | 0.833090 | 6.510300e-56 | -8.615850e-47 |
| Msa0096860 | Msa0827800 | 0.804637 | 1.962825e-49 | -8.615850e-47 |
| Msa0096860 | Msa0836740 | 0.815584 | 8.579323e-52 | -8.615850e-47 |
| Msa0096860 | Msa0846180 | -0.804339 | 2.265425e-49 | -8.615850e-47 |
| Msa0096860 | Msa0847140 | 0.838417 | 2.910930e-57 | -8.615850e-47 |
| Msa0096860 | Msa0854380 | 0.800868 | 1.177829e-48 | -8.615850e-47 |
| Msa0096860 | Msa0854860 | 0.823225 | 1.553631e-53 | -8.615850e-47 |
| Msa0096860 | Msa0863840 | 0.829599 | 4.704950e-55 | -8.615850e-47 |
| Msa0096860 | Msa0863850 | 0.828685 | 7.837302e-55 | -8.615850e-47 |
| Msa0096860 | Msa0863860 | 0.820774 | 5.743279e-53 | -8.615850e-47 |
| Msa0096860 | Msa0864160 | 0.818835 | 1.593060e-52 | -8.615850e-47 |
| Msa0096860 | Msa0876030 | -0.801482 | 8.820935e-49 | -8.615850e-47 |
| Msa0096860 | Msa0883640 | 0.802038 | 6.781265e-49 | -8.615850e-47 |
| Msa0096860 | Msa0883880 | -0.805717 | 1.166299e-49 | -8.615850e-47 |
| Msa0096860 | Msa0886370 | 0.822554 | 2.225716e-53 | -8.615850e-47 |
| Msa0096860 | Msa0890210 | 0.828523 | 8.573634e-55 | -8.615850e-47 |
| Msa0096860 | Msa0896920 | 0.843318 | 1.508160e-58 | -8.615850e-47 |
| Msa0096860 | Msa0902340 | 0.803364 | 3.610920e-49 | -8.615850e-47 |
| Msa0096860 | Msa0910590 | 0.826216 | 3.063813e-54 | -8.615850e-47 |
| Msa0096860 | Msa0910830 | 0.813808 | 2.121992e-51 | -8.615850e-47 |
| Msa0096860 | Msa0911490 | -0.801944 | 7.089756e-49 | -8.615850e-47 |
| Msa0096860 | Msa0913500 | 0.826863 | 2.147789e-54 | -8.615850e-47 |
| Msa0096860 | Msa0913550 | 0.801911 | 7.199854e-49 | -8.615850e-47 |
| Msa0096860 | Msa0930150 | -0.801701 | 7.952071e-49 | -8.615850e-47 |
| Msa0096860 | Msa0932040 | -0.802588 | 5.224640e-49 | -8.615850e-47 |
| Msa0096860 | Msa0948430 | 0.821435 | 4.043981e-53 | -8.615850e-47 |
| Msa0096860 | Msa0950090 | 0.838666 | 2.511845e-57 | -8.615850e-47 |
| Msa0096860 | Msa0951060 | 0.815288 | 9.984380e-52 | -8.615850e-47 |
| Msa0096860 | Msa0960090 | 0.802239 | 6.164997e-49 | -8.615850e-47 |
| Msa0096860 | Msa0962320 | 0.811949 | 5.420464e-51 | -8.615850e-47 |
| Msa0096860 | Msa0970160 | -0.800865 | 1.179307e-48 | -8.615850e-47 |
| Msa0096860 | Msa0974410 | -0.801116 | 1.047865e-48 | -8.615850e-47 |
| Msa0096860 | Msa0985250 | 0.815452 | 9.177594e-52 | -8.615850e-47 |
| Msa0096860 | Msa0985700 | 0.805180 | 1.511571e-49 | -8.615850e-47 |
| Msa0096860 | Msa0987020 | 0.806466 | 8.115790e-50 | -8.615850e-47 |
| Msa0096860 | Msa0987550 | 0.820848 | 5.522783e-53 | -8.615850e-47 |
| Msa0096860 | Msa0996980 | 0.826531 | 2.578076e-54 | -8.615850e-47 |
| Msa0096860 | Msa0996990 | 0.803178 | 3.946591e-49 | -8.615850e-47 |
| Msa0096860 | Msa1003120 | 0.814386 | 1.581626e-51 | -8.615850e-47 |
| Msa0096860 | Msa1007930 | 0.800290 | 1.545000e-48 | -8.615850e-47 |
| Msa0096860 | Msa1021620 | 0.819478 | 1.137099e-52 | -8.615850e-47 |
| Msa0096860 | Msa1024420 | 0.811186 | 7.940434e-51 | -8.615850e-47 |
| Msa0096860 | Msa1031060 | 0.809936 | 1.479093e-50 | -8.615850e-47 |
| Msa0096860 | Msa1036590 | 0.823661 | 1.228603e-53 | -8.615850e-47 |
| Msa0096860 | Msa1037530 | 0.807470 | 4.975202e-50 | -8.615850e-47 |
| Msa0096860 | Msa1046220 | 0.822104 | 2.831810e-53 | -8.615850e-47 |
| Msa0096860 | Msa1047300 | 0.811623 | 6.381310e-51 | -8.615850e-47 |
| Msa0096860 | Msa1047340 | 0.810263 | 1.257088e-50 | -8.615850e-47 |
| Msa0096860 | Msa1048350 | 0.804758 | 1.852451e-49 | -8.615850e-47 |
| Msa0096860 | Msa1048390 | 0.805656 | 1.201294e-49 | -8.615850e-47 |
| Msa0096860 | Msa1049400 | 0.802659 | 5.050263e-49 | -8.615850e-47 |
| Msa0096860 | Msa1061670 | 0.819328 | 1.230646e-52 | -8.615850e-47 |
| Msa0096860 | Msa1063260 | 0.822318 | 2.526154e-53 | -8.615850e-47 |
| Msa0096860 | Msa1064940 | 0.836102 | 1.139228e-56 | -8.615850e-47 |
| Msa0096860 | Msa1076830 | 0.825841 | 3.762804e-54 | -8.615850e-47 |
| Msa0096860 | Msa1076900 | 0.824606 | 7.367450e-54 | -8.615850e-47 |
| Msa0096860 | Msa1085560 | 0.809746 | 1.624729e-50 | -8.615850e-47 |
| Msa0096860 | Msa1090990 | 0.807377 | 5.206794e-50 | -8.615850e-47 |
| Msa0096860 | Msa1098470 | -0.803388 | 3.570137e-49 | -8.615850e-47 |
| Msa0096860 | Msa1099640 | 0.803473 | 3.428667e-49 | -8.615850e-47 |
| Msa0096860 | Msa1100330 | 0.825641 | 4.196387e-54 | -8.615850e-47 |
| Msa0096860 | Msa1106960 | 0.815952 | 7.101641e-52 | -8.615850e-47 |
| Msa0096860 | Msa1108610 | 0.802850 | 4.612674e-49 | -8.615850e-47 |
| Msa0096860 | Msa1109540 | 0.862247 | 5.800539e-64 | -8.615850e-47 |
| Msa0096860 | Msa1109880 | 0.807719 | 4.406657e-50 | -8.615850e-47 |
| Msa0096860 | Msa1109890 | 0.807124 | 5.892825e-50 | -8.615850e-47 |
| Msa0096860 | Msa1110040 | 0.812922 | 3.321395e-51 | -8.615850e-47 |
| Msa0096860 | Msa1115900 | 0.808816 | 2.572270e-50 | -8.615850e-47 |
| Msa0096860 | Msa1124220 | 0.808479 | 3.034852e-50 | -8.615850e-47 |
| Msa0096860 | Msa1133850 | 0.814193 | 1.745046e-51 | -8.615850e-47 |
| Msa0096860 | Msa1136060 | 0.805349 | 1.393728e-49 | -8.615850e-47 |
| Msa0096860 | Msa1138110 | 0.822706 | 2.052385e-53 | -8.615850e-47 |
| Msa0096860 | Msa1162370 | 0.800512 | 1.392018e-48 | -8.615850e-47 |
| Msa0096860 | Msa1173290 | 0.825043 | 5.811399e-54 | -8.615850e-47 |
| Msa0096860 | Msa1206330 | 0.803081 | 4.132527e-49 | -8.615850e-47 |
| Msa0096860 | Msa1206380 | 0.807993 | 3.851978e-50 | -8.615850e-47 |
| Msa0096860 | Msa1216120 | 0.824359 | 8.425677e-54 | -8.615850e-47 |
| Msa0096860 | Msa1216370 | 0.810504 | 1.115287e-50 | -8.615850e-47 |
| Msa0096860 | Msa1219780 | 0.800282 | 1.550839e-48 | -8.615850e-47 |
| Msa0096860 | Msa1221170 | 0.816683 | 4.873696e-52 | -8.615850e-47 |
| Msa0096860 | Msa1263000 | 0.831779 | 1.375943e-55 | -8.615850e-47 |
| Msa0096860 | Msa1263370 | 0.807119 | 5.906996e-50 | -8.615850e-47 |
| Msa0096860 | Msa1265500 | 0.816898 | 4.361308e-52 | -8.615850e-47 |
| Msa0096860 | Msa1266710 | 0.800066 | 1.715810e-48 | -8.615850e-47 |
| Msa0096860 | Msa1269500 | 0.804995 | 1.652701e-49 | -8.615850e-47 |
| Msa0096860 | Msa1273320 | 0.801262 | 9.781490e-49 | -8.615850e-47 |
| Msa0096860 | Msa1335500 | 0.810992 | 8.745926e-51 | -8.615850e-47 |
| Msa0096860 | Msa1341030 | 0.801789 | 7.627029e-49 | -8.615850e-47 |
| Msa0096860 | Msa1355340 | 0.831782 | 1.373002e-55 | -8.615850e-47 |
| Msa0096860 | Msa1356500 | -0.804154 | 2.475651e-49 | -8.615850e-47 |
| Msa0096860 | Msa1357840 | 0.819717 | 1.002914e-52 | -8.615850e-47 |
| Msa0096860 | Msa1361500 | 0.806596 | 7.617595e-50 | -8.615850e-47 |
| Msa0096860 | Msa1362520 | 0.816451 | 5.493619e-52 | -8.615850e-47 |
| Msa0096860 | Msa1376070 | 0.822129 | 2.794438e-53 | -8.615850e-47 |
| Msa0096860 | Msa1376520 | 0.800766 | 1.235703e-48 | -8.615850e-47 |
| Msa0096860 | Msa1377190 | 0.800908 | 1.155915e-48 | -8.615850e-47 |
| Msa0096860 | Msa1377460 | 0.823708 | 1.197663e-53 | -8.615850e-47 |
| Msa0096860 | Msa1378950 | 0.832831 | 7.551563e-56 | -8.615850e-47 |
| Msa0096860 | Msa1409060 | 0.826249 | 3.008726e-54 | -8.615850e-47 |
| Msa0096860 | Msa1409600 | 0.819034 | 1.435080e-52 | -8.615850e-47 |
| Msa0096860 | Msa1411550 | 0.803547 | 3.309272e-49 | -8.615850e-47 |
| Msa0096860 | Msa1417220 | 0.836465 | 9.213235e-57 | -8.615850e-47 |
| Msa0096860 | Msa1426690 | -0.804962 | 1.679406e-49 | -8.615850e-47 |
| Msa0096860 | Msa1434700 | 0.810835 | 9.458856e-51 | -8.615850e-47 |
| Msa0096860 | Msa1445780 | 0.805565 | 1.255751e-49 | -8.615850e-47 |
| Msa0096860 | Msa1446090 | 0.809237 | 2.089605e-50 | -8.615850e-47 |
| Msa0096860 | Msa1456600 | 0.802869 | 4.571836e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096860 | MtrunA17_Chr1g0186441 | 77.241 | 290 | 19 | 2 | 1 | 289 | 4 | 247 | 3.70e-118 | 339 |
| Msa0096860 | MtrunA17_Chr1g0168121 | 68.345 | 278 | 72 | 5 | 25 | 289 | 1 | 275 | 5.72e-103 | 301 |
| Msa0096860 | MtrunA17_Chr1g0190051 | 54.313 | 313 | 111 | 10 | 1 | 289 | 1 | 305 | 1.17e-79 | 243 |
| Msa0096860 | MtrunA17_Chr3g0112131 | 59.910 | 222 | 71 | 5 | 69 | 278 | 86 | 301 | 1.68e-68 | 215 |
| Msa0096860 | MtrunA17_Chr5g0443311 | 56.364 | 220 | 76 | 5 | 62 | 281 | 51 | 250 | 2.19e-65 | 205 |
| Msa0096860 | MtrunA17_Chr5g0398531 | 74.026 | 154 | 40 | 0 | 62 | 215 | 100 | 253 | 8.74e-65 | 206 |
| Msa0096860 | MtrunA17_Chr8g0351651 | 60.262 | 229 | 84 | 6 | 62 | 289 | 86 | 308 | 1.19e-63 | 202 |
| Msa0096860 | MtrunA17_Chr7g0250031 | 50.923 | 271 | 108 | 5 | 12 | 270 | 1 | 258 | 1.87e-63 | 201 |
| Msa0096860 | MtrunA17_Chr3g0133051 | 50.556 | 180 | 85 | 2 | 54 | 229 | 66 | 245 | 1.83e-58 | 188 |
| Msa0096860 | MtrunA17_Chr4g0054651 | 57.789 | 199 | 73 | 3 | 69 | 265 | 83 | 272 | 3.68e-58 | 188 |
| Msa0096860 | MtrunA17_Chr5g0435681 | 67.133 | 143 | 47 | 0 | 69 | 211 | 96 | 238 | 7.75e-53 | 175 |
| Msa0096860 | MtrunA17_Chr5g0427311 | 43.404 | 235 | 107 | 6 | 27 | 249 | 9 | 229 | 1.47e-44 | 151 |
| Msa0096860 | MtrunA17_Chr1g0186461 | 57.303 | 178 | 28 | 4 | 49 | 226 | 39 | 168 | 1.64e-39 | 136 |
| Msa0096860 | MtrunA17_Chr3g0094471 | 36.923 | 195 | 97 | 2 | 40 | 208 | 33 | 227 | 6.31e-34 | 125 |
| Msa0096860 | MtrunA17_Chr5g0441851 | 31.548 | 168 | 104 | 2 | 53 | 209 | 68 | 235 | 1.13e-28 | 109 |
| Msa0096860 | MtrunA17_Chr5g0397551 | 33.500 | 200 | 113 | 7 | 61 | 248 | 103 | 294 | 3.47e-23 | 97.1 |
| Msa0096860 | MtrunA17_Chr1g0175001 | 29.775 | 178 | 115 | 2 | 61 | 228 | 84 | 261 | 5.54e-22 | 93.2 |
| Msa0096860 | MtrunA17_Chr4g0028211 | 32.370 | 173 | 105 | 3 | 47 | 209 | 23 | 193 | 5.61e-22 | 92.0 |
| Msa0096860 | MtrunA17_Chr4g0028181 | 31.481 | 162 | 101 | 2 | 60 | 211 | 49 | 210 | 1.62e-21 | 91.7 |
| Msa0096860 | MtrunA17_Chr5g0441901 | 33.548 | 155 | 93 | 3 | 60 | 205 | 73 | 226 | 2.24e-21 | 90.1 |
| Msa0096860 | MtrunA17_Chr1g0190011 | 37.500 | 136 | 81 | 2 | 71 | 202 | 88 | 223 | 1.04e-20 | 90.1 |
| Msa0096860 | MtrunA17_Chr6g0476061 | 39.655 | 116 | 67 | 1 | 89 | 201 | 130 | 245 | 1.37e-20 | 89.7 |
| Msa0096860 | MtrunA17_Chr5g0441441 | 35.065 | 154 | 92 | 2 | 62 | 208 | 50 | 202 | 1.43e-20 | 88.2 |
| Msa0096860 | MtrunA17_Chr1g0161621 | 30.864 | 162 | 100 | 2 | 60 | 209 | 99 | 260 | 7.56e-20 | 87.4 |
| Msa0096860 | MtrunA17_Chr1g0179461 | 39.474 | 114 | 65 | 2 | 92 | 201 | 148 | 261 | 2.16e-19 | 87.0 |
| Msa0096860 | MtrunA17_Chr7g0274821 | 39.823 | 113 | 68 | 0 | 89 | 201 | 143 | 255 | 1.13e-17 | 82.0 |
| Msa0096860 | MtrunA17_Chr4g0054661 | 36.667 | 150 | 74 | 5 | 62 | 201 | 118 | 256 | 1.26e-17 | 81.6 |
| Msa0096860 | MtrunA17_Chr7g0247431 | 34.731 | 167 | 100 | 3 | 60 | 220 | 125 | 288 | 1.52e-17 | 81.6 |
| Msa0096860 | MtrunA17_Chr4g0034501 | 39.175 | 97 | 59 | 0 | 60 | 156 | 32 | 128 | 6.17e-17 | 76.6 |
| Msa0096860 | MtrunA17_Chr8g0351761 | 35.294 | 153 | 91 | 2 | 92 | 240 | 145 | 293 | 1.02e-16 | 79.3 |
| Msa0096860 | MtrunA17_Chr8g0386741 | 31.944 | 144 | 94 | 3 | 80 | 220 | 157 | 299 | 1.66e-16 | 78.6 |
| Msa0096860 | MtrunA17_Chr8g0349091 | 40.566 | 106 | 60 | 1 | 55 | 157 | 118 | 223 | 2.01e-16 | 78.2 |
| Msa0096860 | MtrunA17_Chr7g0245841 | 47.761 | 67 | 35 | 0 | 92 | 158 | 130 | 196 | 5.16e-16 | 77.0 |
| Msa0096860 | MtrunA17_Chr1g0188211 | 37.931 | 116 | 68 | 2 | 89 | 201 | 134 | 248 | 6.61e-16 | 76.6 |
| Msa0096860 | MtrunA17_Chr8g0374021 | 31.250 | 160 | 92 | 5 | 93 | 238 | 5 | 160 | 1.04e-14 | 70.5 |
| Msa0096860 | MtrunA17_Chr4g0027371 | 35.915 | 142 | 80 | 4 | 79 | 209 | 4 | 145 | 2.34e-13 | 68.2 |
| Msa0096860 | MtrunA17_Chr4g0056761 | 43.284 | 67 | 38 | 0 | 92 | 158 | 147 | 213 | 3.92e-13 | 68.6 |
| Msa0096860 | MtrunA17_Chr5g0398621 | 29.286 | 140 | 91 | 3 | 92 | 224 | 100 | 238 | 7.47e-13 | 67.0 |
| Msa0096860 | MtrunA17_Chr6g0476241 | 38.739 | 111 | 66 | 2 | 92 | 202 | 180 | 288 | 1.93e-12 | 66.2 |
| Msa0096860 | MtrunA17_Chr4g0027351 | 38.333 | 120 | 65 | 4 | 79 | 190 | 4 | 122 | 3.90e-12 | 62.8 |
| Msa0096860 | MtrunA17_Chr4g0027331 | 37.398 | 123 | 66 | 4 | 79 | 190 | 4 | 126 | 2.03e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096860 | AT4G14465.1 | 61.486 | 296 | 92 | 7 | 1 | 289 | 1 | 281 | 2.91e-104 | 305 |
| Msa0096860 | AT3G04570.1 | 62.762 | 239 | 59 | 5 | 1 | 211 | 1 | 237 | 4.31e-80 | 245 |
| Msa0096860 | AT1G76500.1 | 63.102 | 187 | 55 | 4 | 38 | 213 | 49 | 232 | 1.99e-63 | 202 |
| Msa0096860 | AT2G35270.1 | 65.161 | 155 | 54 | 0 | 62 | 216 | 78 | 232 | 3.76e-62 | 198 |
| Msa0096860 | AT2G45430.1 | 59.292 | 226 | 81 | 6 | 62 | 280 | 89 | 310 | 6.21e-62 | 199 |
| Msa0096860 | AT2G42940.1 | 64.286 | 154 | 55 | 0 | 62 | 215 | 53 | 206 | 3.68e-61 | 194 |
| Msa0096860 | AT4G22810.1 | 54.357 | 241 | 76 | 5 | 62 | 289 | 105 | 324 | 8.09e-61 | 196 |
| Msa0096860 | AT3G60870.1 | 55.838 | 197 | 76 | 4 | 19 | 206 | 7 | 201 | 4.39e-60 | 192 |
| Msa0096860 | AT4G12050.1 | 70.323 | 155 | 45 | 1 | 62 | 215 | 118 | 272 | 1.67e-57 | 188 |
| Msa0096860 | AT5G49700.1 | 41.304 | 276 | 119 | 9 | 25 | 289 | 33 | 276 | 1.89e-57 | 186 |
| Msa0096860 | AT3G55560.1 | 44.648 | 327 | 106 | 11 | 1 | 280 | 1 | 299 | 2.25e-55 | 181 |
| Msa0096860 | AT4G17800.1 | 55.340 | 206 | 66 | 2 | 69 | 268 | 89 | 274 | 7.98e-55 | 179 |
| Msa0096860 | AT4G35390.1 | 68.000 | 150 | 46 | 1 | 62 | 209 | 63 | 212 | 1.14e-50 | 169 |
| Msa0096860 | AT1G20900.1 | 59.259 | 189 | 60 | 2 | 40 | 211 | 56 | 244 | 2.38e-48 | 163 |
| Msa0096860 | AT1G14490.1 | 49.444 | 180 | 79 | 4 | 63 | 232 | 6 | 183 | 3.46e-45 | 152 |
| Msa0096860 | AT1G14490.2 | 49.444 | 180 | 79 | 4 | 63 | 232 | 25 | 202 | 3.54e-45 | 152 |
| Msa0096860 | AT4G17950.1 | 42.069 | 145 | 77 | 3 | 62 | 201 | 196 | 338 | 7.68e-23 | 97.8 |
| Msa0096860 | AT1G63470.1 | 36.986 | 146 | 85 | 3 | 62 | 201 | 147 | 291 | 1.88e-22 | 96.3 |
| Msa0096860 | AT5G62260.2 | 37.097 | 124 | 75 | 1 | 89 | 209 | 160 | 283 | 2.64e-21 | 91.7 |
| Msa0096860 | AT2G33620.1 | 37.241 | 145 | 87 | 3 | 60 | 201 | 135 | 278 | 1.93e-20 | 90.1 |
| Msa0096860 | AT2G33620.4 | 37.241 | 145 | 87 | 3 | 60 | 201 | 135 | 278 | 1.93e-20 | 90.1 |
| Msa0096860 | AT2G33620.2 | 37.241 | 145 | 87 | 3 | 60 | 201 | 135 | 278 | 1.93e-20 | 90.1 |
| Msa0096860 | AT2G33620.3 | 37.241 | 145 | 87 | 3 | 60 | 201 | 135 | 278 | 1.93e-20 | 90.1 |
| Msa0096860 | AT2G45850.1 | 37.415 | 147 | 86 | 2 | 61 | 201 | 131 | 277 | 2.03e-20 | 90.1 |
| Msa0096860 | AT2G45850.2 | 37.415 | 147 | 86 | 2 | 61 | 201 | 131 | 277 | 2.03e-20 | 90.1 |
| Msa0096860 | AT4G12080.1 | 39.316 | 117 | 68 | 1 | 92 | 205 | 173 | 289 | 3.90e-20 | 89.4 |
| Msa0096860 | AT5G62260.1 | 37.931 | 116 | 69 | 1 | 89 | 201 | 160 | 275 | 4.42e-20 | 89.7 |
| Msa0096860 | AT5G62260.3 | 37.931 | 116 | 69 | 1 | 89 | 201 | 160 | 275 | 4.42e-20 | 89.7 |
| Msa0096860 | AT5G51590.1 | 38.938 | 113 | 66 | 1 | 92 | 201 | 181 | 293 | 8.04e-20 | 89.0 |
| Msa0096860 | AT4G25320.1 | 35.220 | 159 | 83 | 3 | 63 | 201 | 123 | 281 | 9.79e-20 | 88.6 |
| Msa0096860 | AT3G04590.2 | 37.273 | 110 | 69 | 0 | 92 | 201 | 174 | 283 | 2.30e-19 | 87.8 |
| Msa0096860 | AT2G45850.3 | 38.667 | 150 | 82 | 4 | 61 | 202 | 131 | 278 | 4.12e-19 | 85.5 |
| Msa0096860 | AT3G04590.1 | 37.273 | 110 | 69 | 0 | 92 | 201 | 174 | 283 | 5.18e-19 | 85.5 |
| Msa0096860 | AT1G63480.5 | 30.811 | 185 | 107 | 6 | 62 | 226 | 124 | 307 | 5.29e-17 | 80.5 |
| Msa0096860 | AT1G63480.7 | 30.811 | 185 | 107 | 6 | 62 | 226 | 124 | 307 | 5.29e-17 | 80.5 |
| Msa0096860 | AT1G63480.4 | 30.811 | 185 | 107 | 6 | 62 | 226 | 124 | 307 | 5.29e-17 | 80.5 |
| Msa0096860 | AT1G63480.3 | 30.811 | 185 | 107 | 6 | 62 | 226 | 124 | 307 | 5.29e-17 | 80.5 |
| Msa0096860 | AT1G63480.6 | 30.811 | 185 | 107 | 6 | 62 | 226 | 124 | 307 | 5.29e-17 | 80.5 |
| Msa0096860 | AT1G63480.2 | 30.811 | 185 | 107 | 6 | 62 | 226 | 130 | 313 | 5.48e-17 | 80.5 |
| Msa0096860 | AT1G63480.1 | 30.811 | 185 | 107 | 6 | 62 | 226 | 130 | 313 | 5.48e-17 | 80.5 |
| Msa0096860 | AT5G46640.1 | 42.759 | 145 | 76 | 3 | 62 | 202 | 155 | 296 | 1.69e-16 | 79.3 |
| Msa0096860 | AT3G61310.1 | 34.694 | 147 | 90 | 2 | 61 | 201 | 133 | 279 | 8.72e-15 | 73.9 |
| Msa0096860 | AT4G00200.2 | 39.655 | 116 | 67 | 1 | 92 | 204 | 126 | 241 | 1.95e-14 | 72.8 |
| Msa0096860 | AT4G00200.1 | 39.655 | 116 | 67 | 1 | 92 | 204 | 126 | 241 | 1.95e-14 | 72.8 |
| Msa0096860 | AT4G22770.2 | 38.333 | 120 | 71 | 1 | 92 | 208 | 153 | 272 | 5.79e-14 | 71.6 |
| Msa0096860 | AT4G22770.1 | 38.333 | 120 | 71 | 1 | 92 | 208 | 153 | 272 | 5.79e-14 | 71.6 |
Find 106 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTGGTGAGTGGGTTCC+TGG | 0.152889 | 1_3:+2566317 | None:intergenic |
| CCAAATTTGTTGCCTAATAA+TGG | 0.209471 | 1_3:-2565579 | Msa0096860:CDS |
| CCATTATTAGGCAACAAATT+TGG | 0.219989 | 1_3:+2565579 | None:intergenic |
| ACAATTCAAGGAGGGTTATC+TGG | 0.264024 | 1_3:-2566347 | Msa0096860:CDS |
| ACATGGCTCTTCAAAGCATT+TGG | 0.272297 | 1_3:+2566110 | None:intergenic |
| GTTACAAAGATGGGTGGTTT+TGG | 0.295281 | 1_3:+2566143 | None:intergenic |
| CCCATCTGCCCTCCATTATT+AGG | 0.325156 | 1_3:+2565567 | None:intergenic |
| CCACTCAACTCAACTCAATA+AGG | 0.342276 | 1_3:+2565504 | None:intergenic |
| AGTGTACTTGGCTGGAGGTC+AGG | 0.342488 | 1_3:-2565859 | Msa0096860:CDS |
| GGTGCTGTTGTAGCACTTCA+TGG | 0.358357 | 1_3:-2565954 | Msa0096860:CDS |
| CCTGCTCCACCAGGTTCAAC+TGG | 0.375523 | 1_3:-2565888 | Msa0096860:CDS |
| CTTGCCTGGGCTGTTGCTCA+TGG | 0.381152 | 1_3:-2565534 | Msa0096860:CDS |
| GATCCAGGTGGTCTTCCTCT+TGG | 0.385010 | 1_3:+2566176 | None:intergenic |
| CATGGCTCTTCAAAGCATTT+GGG | 0.396581 | 1_3:+2566111 | None:intergenic |
| TGGGACATGAGGCTCTTGCC+TGG | 0.399930 | 1_3:-2565548 | Msa0096860:CDS |
| GTAGTTGGAGGTTGTGTTGT+TGG | 0.411543 | 1_3:-2565831 | Msa0096860:CDS |
| GGAGGTCAGGGTCAGGTAGT+TGG | 0.413964 | 1_3:-2565846 | Msa0096860:CDS |
| GTGGTCTTCCTCTTGGTCTT+CGG | 0.414167 | 1_3:+2566183 | None:intergenic |
| TGCAACTGATGACCAATTCC+TGG | 0.414250 | 1_3:+2565648 | None:intergenic |
| GGATCGCCTCCACCAGGAAT+TGG | 0.416217 | 1_3:-2565660 | Msa0096860:CDS |
| CAATTCAAGGAGGGTTATCT+GGG | 0.426102 | 1_3:-2566346 | Msa0096860:CDS |
| CTACCTGGTCCTGCTCCACC+AGG | 0.428797 | 1_3:-2565897 | Msa0096860:CDS |
| GCTATCTCTTGTTACAAAGA+TGG | 0.435101 | 1_3:+2566133 | None:intergenic |
| GTGCAAGGTGGAGGAGCGTC+TGG | 0.440396 | 1_3:-2565684 | Msa0096860:CDS |
| CTTGGCTGGAGGTCAGGGTC+AGG | 0.442843 | 1_3:-2565853 | Msa0096860:CDS |
| AACTGGTCTTACAGTGTACT+TGG | 0.444380 | 1_3:-2565871 | Msa0096860:CDS |
| AGGAATTGGTCATCAGTTGC+AGG | 0.445128 | 1_3:-2565646 | Msa0096860:CDS |
| GTTGGAACTCTTGTTGCAGT+TGG | 0.451198 | 1_3:-2565813 | Msa0096860:CDS |
| CACTTGGTGAGTGGGTTCCT+GGG | 0.452332 | 1_3:+2566318 | None:intergenic |
| TTGGTCATCAGTTGCAGGGT+GGG | 0.456584 | 1_3:-2565641 | Msa0096860:CDS |
| GCCTAATAATGGAGGGCAGA+TGG | 0.462555 | 1_3:-2565568 | Msa0096860:CDS |
| AATCCTTGGTGGACAATTCA+AGG | 0.465438 | 1_3:-2566359 | Msa0096860:CDS |
| GCGGGAGGTGTGCAAGGTGG+AGG | 0.466037 | 1_3:-2565693 | Msa0096860:CDS |
| CTATCTCTTGTTACAAAGAT+GGG | 0.474278 | 1_3:+2566134 | None:intergenic |
| TGCACACCTCCCGCAGAACC+AGG | 0.475741 | 1_3:+2565702 | None:intergenic |
| AAAGGCATGGAAGAAGGATC+TGG | 0.482278 | 1_3:+2565615 | None:intergenic |
| CCAGTTGAACCTGGTGGAGC+AGG | 0.482936 | 1_3:+2565888 | None:intergenic |
| AATGAAGGGCCTGGTTCTGC+GGG | 0.484847 | 1_3:-2565711 | Msa0096860:CDS |
| GGTTCTGCGGGAGGTGTGCA+AGG | 0.486519 | 1_3:-2565699 | Msa0096860:CDS |
| CTGTTGTAGCACTTCATGGT+AGG | 0.488288 | 1_3:-2565950 | Msa0096860:CDS |
| GTGTACTTGGCTGGAGGTCA+GGG | 0.493209 | 1_3:-2565858 | Msa0096860:CDS |
| GGGACATGAGGCTCTTGCCT+GGG | 0.498915 | 1_3:-2565547 | Msa0096860:CDS |
| TTCTGCTATATCAGCTCCAC+CGG | 0.501001 | 1_3:+2566076 | None:intergenic |
| CCTAATAATGGAGGGCAGAT+GGG | 0.501432 | 1_3:-2565567 | Msa0096860:CDS |
| GTTTAAACCACTTGGTGAGT+GGG | 0.503662 | 1_3:+2566310 | None:intergenic |
| ACTTCAACTGCACCTTCTCT+AGG | 0.505701 | 1_3:+2566212 | None:intergenic |
| AGGTAGAAAAGTCCCGGTTA+AGG | 0.506619 | 1_3:+2565914 | None:intergenic |
| GATGATAATGATAATAATGA+AGG | 0.507615 | 1_3:-2565726 | Msa0096860:CDS |
| GGTCAGGGTCAGGTAGTTGG+AGG | 0.515248 | 1_3:-2565843 | Msa0096860:CDS |
| CAGCAGTTCTGGCTAATCCT+TGG | 0.516441 | 1_3:-2566373 | None:intergenic |
| CTTAGACAACCTTCAGCTCC+TGG | 0.520193 | 1_3:-2565975 | Msa0096860:CDS |
| TTATTAGGCAACAAATTTGG+TGG | 0.521583 | 1_3:+2565582 | None:intergenic |
| TTATACAAAGGCATGGAAGA+AGG | 0.526106 | 1_3:+2565609 | None:intergenic |
| GGTCTTACAGTGTACTTGGC+TGG | 0.537231 | 1_3:-2565867 | Msa0096860:CDS |
| AATGATAATAATGAAGGGCC+TGG | 0.537636 | 1_3:-2565720 | Msa0096860:CDS |
| TGTTTAAACCACTTGGTGAG+TGG | 0.539187 | 1_3:+2566309 | None:intergenic |
| CAGTTCTGGCTAATCCTTGG+TGG | 0.541662 | 1_3:-2566370 | None:intergenic |
| TAATGAAGGGCCTGGTTCTG+CGG | 0.545608 | 1_3:-2565712 | Msa0096860:CDS |
| AGAGAAGGTGCAGTTGAAGT+TGG | 0.547259 | 1_3:-2566209 | Msa0096860:CDS |
| TGCTTTGAAGAGCCATGTCA+TGG | 0.550949 | 1_3:-2566105 | Msa0096860:CDS |
| TGGTGTTTGTTTAAACCACT+TGG | 0.552489 | 1_3:+2566302 | None:intergenic |
| GTTTGTGTTCTCAGTGGAAG+TGG | 0.555754 | 1_3:-2566017 | Msa0096860:CDS |
| GAACCTGGTGGAGCAGGACC+AGG | 0.556098 | 1_3:+2565894 | None:intergenic |
| AATTTGTTGCCTAATAATGG+AGG | 0.564310 | 1_3:-2565576 | Msa0096860:CDS |
| GTGTGGCACAATTCGCAAGA+AGG | 0.565025 | 1_3:-2566052 | Msa0096860:CDS |
| TCTGGTGGATCGCCTCCACC+AGG | 0.566478 | 1_3:-2565666 | Msa0096860:CDS |
| TGATTGTTAGGTTTGTGTTG+TGG | 0.569261 | 1_3:+2566282 | None:intergenic |
| AGCCATGTCATGGAGGTAGC+CGG | 0.569908 | 1_3:-2566095 | Msa0096860:CDS |
| GGGTTATCTGGGGTTGACCC+AGG | 0.573460 | 1_3:-2566335 | Msa0096860:CDS |
| GAAGGGCCTGGTTCTGCGGG+AGG | 0.573762 | 1_3:-2565708 | Msa0096860:CDS |
| CGCGGTGTTTGTGTTCTCAG+TGG | 0.579327 | 1_3:-2566023 | Msa0096860:CDS |
| TCATTATCATCGTCATCAAG+TGG | 0.580583 | 1_3:+2565738 | None:intergenic |
| TGATGACCAATTCCTGGTGG+AGG | 0.582864 | 1_3:+2565654 | None:intergenic |
| ACTGTAAGACCAGTTGAACC+TGG | 0.584188 | 1_3:+2565879 | None:intergenic |
| AGACCAAGAGGAAGACCACC+TGG | 0.587335 | 1_3:-2566179 | Msa0096860:CDS |
| AGGACCAGGTAGAAAAGTCC+CGG | 0.591266 | 1_3:+2565908 | None:intergenic |
| TGGCAAATTATACAAAGGCA+TGG | 0.593563 | 1_3:+2565602 | None:intergenic |
| TGGAGGGCAGATGGGACATG+AGG | 0.594853 | 1_3:-2565559 | Msa0096860:CDS |
| TCTGCGGGAGGTGTGCAAGG+TGG | 0.595107 | 1_3:-2565696 | Msa0096860:CDS |
| TTTGGTGGCAAATTATACAA+AGG | 0.596262 | 1_3:+2565597 | None:intergenic |
| ACAACAGCACCAGGAGCTGA+AGG | 0.601528 | 1_3:+2565966 | None:intergenic |
| CACCGGCTACCTCCATGACA+TGG | 0.602203 | 1_3:+2566093 | None:intergenic |
| TGAAGTGCTACAACAGCACC+AGG | 0.605157 | 1_3:+2565957 | None:intergenic |
| ATGATAATGATAATAATGAA+GGG | 0.605731 | 1_3:-2565725 | Msa0096860:CDS |
| TCTTCCATGAGCAACAGCCC+AGG | 0.606494 | 1_3:+2565530 | None:intergenic |
| ATTTGTTGCCTAATAATGGA+GGG | 0.617852 | 1_3:-2565575 | Msa0096860:CDS |
| TCTCTTGTTACAAAGATGGG+TGG | 0.617894 | 1_3:+2566137 | None:intergenic |
| CAAGGTGGAGGAGCGTCTGG+TGG | 0.620899 | 1_3:-2565681 | Msa0096860:CDS |
| GGAATTGGTCATCAGTTGCA+GGG | 0.626929 | 1_3:-2565645 | Msa0096860:CDS |
| CTTGGTGGACAATTCAAGGA+GGG | 0.630959 | 1_3:-2566355 | Msa0096860:CDS |
| AGCTGATATAGCAGAAAGTG+TGG | 0.642948 | 1_3:-2566069 | Msa0096860:CDS |
| CTTACAGTGTACTTGGCTGG+AGG | 0.650202 | 1_3:-2565864 | Msa0096860:CDS |
| ATTGGTCATCAGTTGCAGGG+TGG | 0.653304 | 1_3:-2565642 | Msa0096860:CDS |
| AACAGAGATGAACCTAGAGA+AGG | 0.663205 | 1_3:-2566224 | Msa0096860:CDS |
| GTTGGTAACCGAAGACCAAG+AGG | 0.671648 | 1_3:-2566191 | Msa0096860:CDS |
| CTCAACTCAACTCAATAAGG+TGG | 0.676109 | 1_3:+2565507 | None:intergenic |
| CCAGGAACCCACTCACCAAG+TGG | 0.676419 | 1_3:-2566317 | Msa0096860:CDS |
| AACTGATGACCAATTCCTGG+TGG | 0.683488 | 1_3:+2565651 | None:intergenic |
| CCTCCTTGAATTGTCCACCA+AGG | 0.691826 | 1_3:+2566356 | None:intergenic |
| CATGTCATGGAGGTAGCCGG+TGG | 0.697813 | 1_3:-2566092 | Msa0096860:CDS |
| GTAAGACCAGTTGAACCTGG+TGG | 0.698978 | 1_3:+2565882 | None:intergenic |
| AGTAGCATTAGTAAACGTAG+CGG | 0.707477 | 1_3:+2565773 | None:intergenic |
| AATTCAAGGAGGGTTATCTG+GGG | 0.712203 | 1_3:-2566345 | Msa0096860:CDS |
| CCTTGGTGGACAATTCAAGG+AGG | 0.716947 | 1_3:-2566356 | Msa0096860:CDS |
| TTTGAAGAGCCATGTCATGG+AGG | 0.719459 | 1_3:-2566102 | Msa0096860:CDS |
| TTCGCAAGAAGGCGTCAACG+CGG | 0.746882 | 1_3:-2566041 | Msa0096860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATAATGATAATAATGAA+GGG | - | chr1_3:2566158-2566177 | Msa0096860:CDS | 15.0% |
| !!! | ATGATAATGATAATAATGAA+GGG | - | chr1_3:2566158-2566177 | Msa0096860:CDS | 15.0% |
| !!! | GATGATAATGATAATAATGA+AGG | - | chr1_3:2566157-2566176 | Msa0096860:CDS | 20.0% |
| !!! | GATGATAATGATAATAATGA+AGG | - | chr1_3:2566157-2566176 | Msa0096860:CDS | 20.0% |
| !! | CGTGATTTTCATTGATTGTT+AGG | + | chr1_3:2565616-2565635 | None:intergenic | 30.0% |
| CTATCTCTTGTTACAAAGAT+GGG | + | chr1_3:2565752-2565771 | None:intergenic | 30.0% | |
| !! | TTTGAGATTTTGTCCTTAAC+CGG | - | chr1_3:2565956-2565975 | Msa0096860:CDS | 30.0% |
| ! | TTTGGTGGCAAATTATACAA+AGG | + | chr1_3:2566289-2566308 | None:intergenic | 30.0% |
| TTATTAGGCAACAAATTTGG+TGG | + | chr1_3:2566304-2566323 | None:intergenic | 30.0% | |
| CCATTATTAGGCAACAAATT+TGG | + | chr1_3:2566307-2566326 | None:intergenic | 30.0% | |
| !! | CCAAATTTGTTGCCTAATAA+TGG | - | chr1_3:2566304-2566323 | Msa0096860:CDS | 30.0% |
| !! | AATTTGTTGCCTAATAATGG+AGG | - | chr1_3:2566307-2566326 | Msa0096860:CDS | 30.0% |
| ! | ATTTGTTGCCTAATAATGGA+GGG | - | chr1_3:2566308-2566327 | Msa0096860:CDS | 30.0% |
| !! | CGTGATTTTCATTGATTGTT+AGG | + | chr1_3:2565616-2565635 | None:intergenic | 30.0% |
| CTATCTCTTGTTACAAAGAT+GGG | + | chr1_3:2565752-2565771 | None:intergenic | 30.0% | |
| !! | TTTGAGATTTTGTCCTTAAC+CGG | - | chr1_3:2565956-2565975 | Msa0096860:CDS | 30.0% |
| ! | TTTGGTGGCAAATTATACAA+AGG | + | chr1_3:2566289-2566308 | None:intergenic | 30.0% |
| TTATTAGGCAACAAATTTGG+TGG | + | chr1_3:2566304-2566323 | None:intergenic | 30.0% | |
| CCATTATTAGGCAACAAATT+TGG | + | chr1_3:2566307-2566326 | None:intergenic | 30.0% | |
| !! | CCAAATTTGTTGCCTAATAA+TGG | - | chr1_3:2566304-2566323 | Msa0096860:CDS | 30.0% |
| !! | AATTTGTTGCCTAATAATGG+AGG | - | chr1_3:2566307-2566326 | Msa0096860:CDS | 30.0% |
| ! | ATTTGTTGCCTAATAATGGA+GGG | - | chr1_3:2566308-2566327 | Msa0096860:CDS | 30.0% |
| TGGTGTTTGTTTAAACCACT+TGG | + | chr1_3:2565584-2565603 | None:intergenic | 35.0% | |
| TGATTGTTAGGTTTGTGTTG+TGG | + | chr1_3:2565604-2565623 | None:intergenic | 35.0% | |
| GCTATCTCTTGTTACAAAGA+TGG | + | chr1_3:2565753-2565772 | None:intergenic | 35.0% | |
| ! | TTGAGATTTTGTCCTTAACC+GGG | - | chr1_3:2565957-2565976 | Msa0096860:CDS | 35.0% |
| AGTAGCATTAGTAAACGTAG+CGG | + | chr1_3:2566113-2566132 | None:intergenic | 35.0% | |
| TCATTATCATCGTCATCAAG+TGG | + | chr1_3:2566148-2566167 | None:intergenic | 35.0% | |
| AATGATAATAATGAAGGGCC+TGG | - | chr1_3:2566163-2566182 | Msa0096860:CDS | 35.0% | |
| ! | TTATACAAAGGCATGGAAGA+AGG | + | chr1_3:2566277-2566296 | None:intergenic | 35.0% |
| TGGCAAATTATACAAAGGCA+TGG | + | chr1_3:2566284-2566303 | None:intergenic | 35.0% | |
| TGGTGTTTGTTTAAACCACT+TGG | + | chr1_3:2565584-2565603 | None:intergenic | 35.0% | |
| TGATTGTTAGGTTTGTGTTG+TGG | + | chr1_3:2565604-2565623 | None:intergenic | 35.0% | |
| GCTATCTCTTGTTACAAAGA+TGG | + | chr1_3:2565753-2565772 | None:intergenic | 35.0% | |
| ! | TTGAGATTTTGTCCTTAACC+GGG | - | chr1_3:2565957-2565976 | Msa0096860:CDS | 35.0% |
| AGTAGCATTAGTAAACGTAG+CGG | + | chr1_3:2566113-2566132 | None:intergenic | 35.0% | |
| TCATTATCATCGTCATCAAG+TGG | + | chr1_3:2566148-2566167 | None:intergenic | 35.0% | |
| AATGATAATAATGAAGGGCC+TGG | - | chr1_3:2566163-2566182 | Msa0096860:CDS | 35.0% | |
| ! | TTATACAAAGGCATGGAAGA+AGG | + | chr1_3:2566277-2566296 | None:intergenic | 35.0% |
| TGGCAAATTATACAAAGGCA+TGG | + | chr1_3:2566284-2566303 | None:intergenic | 35.0% | |
| ! | AATCCTTGGTGGACAATTCA+AGG | - | chr1_3:2565524-2565543 | Msa0096860:CDS | 40.0% |
| ACAATTCAAGGAGGGTTATC+TGG | - | chr1_3:2565536-2565555 | Msa0096860:CDS | 40.0% | |
| CAATTCAAGGAGGGTTATCT+GGG | - | chr1_3:2565537-2565556 | Msa0096860:CDS | 40.0% | |
| AATTCAAGGAGGGTTATCTG+GGG | - | chr1_3:2565538-2565557 | Msa0096860:CDS | 40.0% | |
| ! | GTTTAAACCACTTGGTGAGT+GGG | + | chr1_3:2565576-2565595 | None:intergenic | 40.0% |
| ! | TGTTTAAACCACTTGGTGAG+TGG | + | chr1_3:2565577-2565596 | None:intergenic | 40.0% |
| AACAGAGATGAACCTAGAGA+AGG | - | chr1_3:2565659-2565678 | Msa0096860:CDS | 40.0% | |
| !!! | TTTGGTCTGTTTTTGGATCC+AGG | + | chr1_3:2565725-2565744 | None:intergenic | 40.0% |
| ! | GTTACAAAGATGGGTGGTTT+TGG | + | chr1_3:2565743-2565762 | None:intergenic | 40.0% |
| TCTCTTGTTACAAAGATGGG+TGG | + | chr1_3:2565749-2565768 | None:intergenic | 40.0% | |
| ! | CATGGCTCTTCAAAGCATTT+GGG | + | chr1_3:2565775-2565794 | None:intergenic | 40.0% |
| ! | ACATGGCTCTTCAAAGCATT+TGG | + | chr1_3:2565776-2565795 | None:intergenic | 40.0% |
| AGCTGATATAGCAGAAAGTG+TGG | - | chr1_3:2565814-2565833 | Msa0096860:CDS | 40.0% | |
| !! | AACTGGTCTTACAGTGTACT+TGG | - | chr1_3:2566012-2566031 | Msa0096860:CDS | 40.0% |
| ! | AATCCTTGGTGGACAATTCA+AGG | - | chr1_3:2565524-2565543 | Msa0096860:CDS | 40.0% |
| ACAATTCAAGGAGGGTTATC+TGG | - | chr1_3:2565536-2565555 | Msa0096860:CDS | 40.0% | |
| CAATTCAAGGAGGGTTATCT+GGG | - | chr1_3:2565537-2565556 | Msa0096860:CDS | 40.0% | |
| AATTCAAGGAGGGTTATCTG+GGG | - | chr1_3:2565538-2565557 | Msa0096860:CDS | 40.0% | |
| ! | GTTTAAACCACTTGGTGAGT+GGG | + | chr1_3:2565576-2565595 | None:intergenic | 40.0% |
| ! | TGTTTAAACCACTTGGTGAG+TGG | + | chr1_3:2565577-2565596 | None:intergenic | 40.0% |
| AACAGAGATGAACCTAGAGA+AGG | - | chr1_3:2565659-2565678 | Msa0096860:CDS | 40.0% | |
| !!! | TTTGGTCTGTTTTTGGATCC+AGG | + | chr1_3:2565725-2565744 | None:intergenic | 40.0% |
| ! | GTTACAAAGATGGGTGGTTT+TGG | + | chr1_3:2565743-2565762 | None:intergenic | 40.0% |
| TCTCTTGTTACAAAGATGGG+TGG | + | chr1_3:2565749-2565768 | None:intergenic | 40.0% | |
| ! | CATGGCTCTTCAAAGCATTT+GGG | + | chr1_3:2565775-2565794 | None:intergenic | 40.0% |
| ! | ACATGGCTCTTCAAAGCATT+TGG | + | chr1_3:2565776-2565795 | None:intergenic | 40.0% |
| AGCTGATATAGCAGAAAGTG+TGG | - | chr1_3:2565814-2565833 | Msa0096860:CDS | 40.0% | |
| !! | AACTGGTCTTACAGTGTACT+TGG | - | chr1_3:2566012-2566031 | Msa0096860:CDS | 40.0% |
| ! | CTTGGTGGACAATTCAAGGA+GGG | - | chr1_3:2565528-2565547 | Msa0096860:CDS | 45.0% |
| ACTTCAACTGCACCTTCTCT+AGG | + | chr1_3:2565674-2565693 | None:intergenic | 45.0% | |
| ! | AGAGAAGGTGCAGTTGAAGT+TGG | - | chr1_3:2565674-2565693 | Msa0096860:CDS | 45.0% |
| !!! | GGGTGGTTTTGGTCTGTTTT+TGG | + | chr1_3:2565732-2565751 | None:intergenic | 45.0% |
| !! | TGCTTTGAAGAGCCATGTCA+TGG | - | chr1_3:2565778-2565797 | Msa0096860:CDS | 45.0% |
| TTTGAAGAGCCATGTCATGG+AGG | - | chr1_3:2565781-2565800 | Msa0096860:CDS | 45.0% | |
| TTCTGCTATATCAGCTCCAC+CGG | + | chr1_3:2565810-2565829 | None:intergenic | 45.0% | |
| GTTTGTGTTCTCAGTGGAAG+TGG | - | chr1_3:2565866-2565885 | Msa0096860:CDS | 45.0% | |
| CTGTTGTAGCACTTCATGGT+AGG | - | chr1_3:2565933-2565952 | Msa0096860:CDS | 45.0% | |
| AGGTAGAAAAGTCCCGGTTA+AGG | + | chr1_3:2565972-2565991 | None:intergenic | 45.0% | |
| ! | TTAACCGGGACTTTTCTACC+TGG | - | chr1_3:2565971-2565990 | Msa0096860:CDS | 45.0% |
| ACTGTAAGACCAGTTGAACC+TGG | + | chr1_3:2566007-2566026 | None:intergenic | 45.0% | |
| GTAGTTGGAGGTTGTGTTGT+TGG | - | chr1_3:2566052-2566071 | Msa0096860:CDS | 45.0% | |
| GTTGGAACTCTTGTTGCAGT+TGG | - | chr1_3:2566070-2566089 | Msa0096860:CDS | 45.0% | |
| AACTGATGACCAATTCCTGG+TGG | + | chr1_3:2566235-2566254 | None:intergenic | 45.0% | |
| TGCAACTGATGACCAATTCC+TGG | + | chr1_3:2566238-2566257 | None:intergenic | 45.0% | |
| AGGAATTGGTCATCAGTTGC+AGG | - | chr1_3:2566237-2566256 | Msa0096860:CDS | 45.0% | |
| GGAATTGGTCATCAGTTGCA+GGG | - | chr1_3:2566238-2566257 | Msa0096860:CDS | 45.0% | |
| ! | AAAGGCATGGAAGAAGGATC+TGG | + | chr1_3:2566271-2566290 | None:intergenic | 45.0% |
| ! | CCTAATAATGGAGGGCAGAT+GGG | - | chr1_3:2566316-2566335 | Msa0096860:CDS | 45.0% |
| ! | CTTGGTGGACAATTCAAGGA+GGG | - | chr1_3:2565528-2565547 | Msa0096860:CDS | 45.0% |
| ACTTCAACTGCACCTTCTCT+AGG | + | chr1_3:2565674-2565693 | None:intergenic | 45.0% | |
| ! | AGAGAAGGTGCAGTTGAAGT+TGG | - | chr1_3:2565674-2565693 | Msa0096860:CDS | 45.0% |
| !!! | GGGTGGTTTTGGTCTGTTTT+TGG | + | chr1_3:2565732-2565751 | None:intergenic | 45.0% |
| !! | TGCTTTGAAGAGCCATGTCA+TGG | - | chr1_3:2565778-2565797 | Msa0096860:CDS | 45.0% |
| TTTGAAGAGCCATGTCATGG+AGG | - | chr1_3:2565781-2565800 | Msa0096860:CDS | 45.0% | |
| TTCTGCTATATCAGCTCCAC+CGG | + | chr1_3:2565810-2565829 | None:intergenic | 45.0% | |
| GTTTGTGTTCTCAGTGGAAG+TGG | - | chr1_3:2565866-2565885 | Msa0096860:CDS | 45.0% | |
| CTGTTGTAGCACTTCATGGT+AGG | - | chr1_3:2565933-2565952 | Msa0096860:CDS | 45.0% | |
| AGGTAGAAAAGTCCCGGTTA+AGG | + | chr1_3:2565972-2565991 | None:intergenic | 45.0% | |
| ! | TTAACCGGGACTTTTCTACC+TGG | - | chr1_3:2565971-2565990 | Msa0096860:CDS | 45.0% |
| ACTGTAAGACCAGTTGAACC+TGG | + | chr1_3:2566007-2566026 | None:intergenic | 45.0% | |
| GTAGTTGGAGGTTGTGTTGT+TGG | - | chr1_3:2566052-2566071 | Msa0096860:CDS | 45.0% | |
| GTTGGAACTCTTGTTGCAGT+TGG | - | chr1_3:2566070-2566089 | Msa0096860:CDS | 45.0% | |
| AACTGATGACCAATTCCTGG+TGG | + | chr1_3:2566235-2566254 | None:intergenic | 45.0% | |
| TGCAACTGATGACCAATTCC+TGG | + | chr1_3:2566238-2566257 | None:intergenic | 45.0% | |
| AGGAATTGGTCATCAGTTGC+AGG | - | chr1_3:2566237-2566256 | Msa0096860:CDS | 45.0% | |
| GGAATTGGTCATCAGTTGCA+GGG | - | chr1_3:2566238-2566257 | Msa0096860:CDS | 45.0% | |
| ! | AAAGGCATGGAAGAAGGATC+TGG | + | chr1_3:2566271-2566290 | None:intergenic | 45.0% |
| ! | CCTAATAATGGAGGGCAGAT+GGG | - | chr1_3:2566316-2566335 | Msa0096860:CDS | 45.0% |
| CCTCCTTGAATTGTCCACCA+AGG | + | chr1_3:2565530-2565549 | None:intergenic | 50.0% | |
| ! | CCTTGGTGGACAATTCAAGG+AGG | - | chr1_3:2565527-2565546 | Msa0096860:CDS | 50.0% |
| !! | GTTGGTAACCGAAGACCAAG+AGG | - | chr1_3:2565692-2565711 | Msa0096860:CDS | 50.0% |
| ! | GTGGTCTTCCTCTTGGTCTT+CGG | + | chr1_3:2565703-2565722 | None:intergenic | 50.0% |
| !!! | GGTCTGTTTTTGGATCCAGG+TGG | + | chr1_3:2565722-2565741 | None:intergenic | 50.0% |
| GTGTGGCACAATTCGCAAGA+AGG | - | chr1_3:2565831-2565850 | Msa0096860:CDS | 50.0% | |
| CTTAGACAACCTTCAGCTCC+TGG | - | chr1_3:2565908-2565927 | Msa0096860:CDS | 50.0% | |
| ! | TGAAGTGCTACAACAGCACC+AGG | + | chr1_3:2565929-2565948 | None:intergenic | 50.0% |
| !! | GGTGCTGTTGTAGCACTTCA+TGG | - | chr1_3:2565929-2565948 | Msa0096860:CDS | 50.0% |
| AGGACCAGGTAGAAAAGTCC+CGG | + | chr1_3:2565978-2565997 | None:intergenic | 50.0% | |
| GTAAGACCAGTTGAACCTGG+TGG | + | chr1_3:2566004-2566023 | None:intergenic | 50.0% | |
| GGTCTTACAGTGTACTTGGC+TGG | - | chr1_3:2566016-2566035 | Msa0096860:CDS | 50.0% | |
| CTTACAGTGTACTTGGCTGG+AGG | - | chr1_3:2566019-2566038 | Msa0096860:CDS | 50.0% | |
| !! | TAATGAAGGGCCTGGTTCTG+CGG | - | chr1_3:2566171-2566190 | Msa0096860:CDS | 50.0% |
| TGATGACCAATTCCTGGTGG+AGG | + | chr1_3:2566232-2566251 | None:intergenic | 50.0% | |
| ATTGGTCATCAGTTGCAGGG+TGG | - | chr1_3:2566241-2566260 | Msa0096860:CDS | 50.0% | |
| TTGGTCATCAGTTGCAGGGT+GGG | - | chr1_3:2566242-2566261 | Msa0096860:CDS | 50.0% | |
| ! | GCCTAATAATGGAGGGCAGA+TGG | - | chr1_3:2566315-2566334 | Msa0096860:CDS | 50.0% |
| CCCATCTGCCCTCCATTATT+AGG | + | chr1_3:2566319-2566338 | None:intergenic | 50.0% | |
| CCTCCTTGAATTGTCCACCA+AGG | + | chr1_3:2565530-2565549 | None:intergenic | 50.0% | |
| ! | CCTTGGTGGACAATTCAAGG+AGG | - | chr1_3:2565527-2565546 | Msa0096860:CDS | 50.0% |
| !! | GTTGGTAACCGAAGACCAAG+AGG | - | chr1_3:2565692-2565711 | Msa0096860:CDS | 50.0% |
| ! | GTGGTCTTCCTCTTGGTCTT+CGG | + | chr1_3:2565703-2565722 | None:intergenic | 50.0% |
| !!! | GGTCTGTTTTTGGATCCAGG+TGG | + | chr1_3:2565722-2565741 | None:intergenic | 50.0% |
| GTGTGGCACAATTCGCAAGA+AGG | - | chr1_3:2565831-2565850 | Msa0096860:CDS | 50.0% | |
| CTTAGACAACCTTCAGCTCC+TGG | - | chr1_3:2565908-2565927 | Msa0096860:CDS | 50.0% | |
| ! | TGAAGTGCTACAACAGCACC+AGG | + | chr1_3:2565929-2565948 | None:intergenic | 50.0% |
| !! | GGTGCTGTTGTAGCACTTCA+TGG | - | chr1_3:2565929-2565948 | Msa0096860:CDS | 50.0% |
| AGGACCAGGTAGAAAAGTCC+CGG | + | chr1_3:2565978-2565997 | None:intergenic | 50.0% | |
| GTAAGACCAGTTGAACCTGG+TGG | + | chr1_3:2566004-2566023 | None:intergenic | 50.0% | |
| GGTCTTACAGTGTACTTGGC+TGG | - | chr1_3:2566016-2566035 | Msa0096860:CDS | 50.0% | |
| CTTACAGTGTACTTGGCTGG+AGG | - | chr1_3:2566019-2566038 | Msa0096860:CDS | 50.0% | |
| !! | TAATGAAGGGCCTGGTTCTG+CGG | - | chr1_3:2566171-2566190 | Msa0096860:CDS | 50.0% |
| TGATGACCAATTCCTGGTGG+AGG | + | chr1_3:2566232-2566251 | None:intergenic | 50.0% | |
| ATTGGTCATCAGTTGCAGGG+TGG | - | chr1_3:2566241-2566260 | Msa0096860:CDS | 50.0% | |
| TTGGTCATCAGTTGCAGGGT+GGG | - | chr1_3:2566242-2566261 | Msa0096860:CDS | 50.0% | |
| ! | GCCTAATAATGGAGGGCAGA+TGG | - | chr1_3:2566315-2566334 | Msa0096860:CDS | 50.0% |
| CCCATCTGCCCTCCATTATT+AGG | + | chr1_3:2566319-2566338 | None:intergenic | 50.0% | |
| ! | CACTTGGTGAGTGGGTTCCT+GGG | + | chr1_3:2565568-2565587 | None:intergenic | 55.0% |
| AGACCAAGAGGAAGACCACC+TGG | - | chr1_3:2565704-2565723 | Msa0096860:CDS | 55.0% | |
| GATCCAGGTGGTCTTCCTCT+TGG | + | chr1_3:2565710-2565729 | None:intergenic | 55.0% | |
| AGCCATGTCATGGAGGTAGC+CGG | - | chr1_3:2565788-2565807 | Msa0096860:CDS | 55.0% | |
| !! | TTCGCAAGAAGGCGTCAACG+CGG | - | chr1_3:2565842-2565861 | Msa0096860:CDS | 55.0% |
| CGCGGTGTTTGTGTTCTCAG+TGG | - | chr1_3:2565860-2565879 | Msa0096860:CDS | 55.0% | |
| ACAACAGCACCAGGAGCTGA+AGG | + | chr1_3:2565920-2565939 | None:intergenic | 55.0% | |
| AGTGTACTTGGCTGGAGGTC+AGG | - | chr1_3:2566024-2566043 | Msa0096860:CDS | 55.0% | |
| GTGTACTTGGCTGGAGGTCA+GGG | - | chr1_3:2566025-2566044 | Msa0096860:CDS | 55.0% | |
| !! | AATGAAGGGCCTGGTTCTGC+GGG | - | chr1_3:2566172-2566191 | Msa0096860:CDS | 55.0% |
| TCTTCCATGAGCAACAGCCC+AGG | + | chr1_3:2566356-2566375 | None:intergenic | 55.0% | |
| ! | CACTTGGTGAGTGGGTTCCT+GGG | + | chr1_3:2565568-2565587 | None:intergenic | 55.0% |
| AGACCAAGAGGAAGACCACC+TGG | - | chr1_3:2565704-2565723 | Msa0096860:CDS | 55.0% | |
| GATCCAGGTGGTCTTCCTCT+TGG | + | chr1_3:2565710-2565729 | None:intergenic | 55.0% | |
| AGCCATGTCATGGAGGTAGC+CGG | - | chr1_3:2565788-2565807 | Msa0096860:CDS | 55.0% | |
| !! | TTCGCAAGAAGGCGTCAACG+CGG | - | chr1_3:2565842-2565861 | Msa0096860:CDS | 55.0% |
| CGCGGTGTTTGTGTTCTCAG+TGG | - | chr1_3:2565860-2565879 | Msa0096860:CDS | 55.0% | |
| ACAACAGCACCAGGAGCTGA+AGG | + | chr1_3:2565920-2565939 | None:intergenic | 55.0% | |
| AGTGTACTTGGCTGGAGGTC+AGG | - | chr1_3:2566024-2566043 | Msa0096860:CDS | 55.0% | |
| GTGTACTTGGCTGGAGGTCA+GGG | - | chr1_3:2566025-2566044 | Msa0096860:CDS | 55.0% | |
| !! | AATGAAGGGCCTGGTTCTGC+GGG | - | chr1_3:2566172-2566191 | Msa0096860:CDS | 55.0% |
| TCTTCCATGAGCAACAGCCC+AGG | + | chr1_3:2566356-2566375 | None:intergenic | 55.0% | |
| ! | GGGTTATCTGGGGTTGACCC+AGG | - | chr1_3:2565548-2565567 | Msa0096860:CDS | 60.0% |
| ! | CCACTTGGTGAGTGGGTTCC+TGG | + | chr1_3:2565569-2565588 | None:intergenic | 60.0% |
| CCAGGAACCCACTCACCAAG+TGG | - | chr1_3:2565566-2565585 | Msa0096860:CDS | 60.0% | |
| ! | CACCGGCTACCTCCATGACA+TGG | + | chr1_3:2565793-2565812 | None:intergenic | 60.0% |
| CATGTCATGGAGGTAGCCGG+TGG | - | chr1_3:2565791-2565810 | Msa0096860:CDS | 60.0% | |
| CCAGTTGAACCTGGTGGAGC+AGG | + | chr1_3:2565998-2566017 | None:intergenic | 60.0% | |
| CCTGCTCCACCAGGTTCAAC+TGG | - | chr1_3:2565995-2566014 | Msa0096860:CDS | 60.0% | |
| GGAGGTCAGGGTCAGGTAGT+TGG | - | chr1_3:2566037-2566056 | Msa0096860:CDS | 60.0% | |
| GGTCAGGGTCAGGTAGTTGG+AGG | - | chr1_3:2566040-2566059 | Msa0096860:CDS | 60.0% | |
| GGATCGCCTCCACCAGGAAT+TGG | - | chr1_3:2566223-2566242 | Msa0096860:CDS | 60.0% | |
| TGGAGGGCAGATGGGACATG+AGG | - | chr1_3:2566324-2566343 | Msa0096860:CDS | 60.0% | |
| TGGGACATGAGGCTCTTGCC+TGG | - | chr1_3:2566335-2566354 | Msa0096860:CDS | 60.0% | |
| GGGACATGAGGCTCTTGCCT+GGG | - | chr1_3:2566336-2566355 | Msa0096860:CDS | 60.0% | |
| CTTGCCTGGGCTGTTGCTCA+TGG | - | chr1_3:2566349-2566368 | Msa0096860:CDS | 60.0% | |
| ! | GGGTTATCTGGGGTTGACCC+AGG | - | chr1_3:2565548-2565567 | Msa0096860:CDS | 60.0% |
| ! | CCACTTGGTGAGTGGGTTCC+TGG | + | chr1_3:2565569-2565588 | None:intergenic | 60.0% |
| CCAGGAACCCACTCACCAAG+TGG | - | chr1_3:2565566-2565585 | Msa0096860:CDS | 60.0% | |
| ! | CACCGGCTACCTCCATGACA+TGG | + | chr1_3:2565793-2565812 | None:intergenic | 60.0% |
| CATGTCATGGAGGTAGCCGG+TGG | - | chr1_3:2565791-2565810 | Msa0096860:CDS | 60.0% | |
| CCAGTTGAACCTGGTGGAGC+AGG | + | chr1_3:2565998-2566017 | None:intergenic | 60.0% | |
| CCTGCTCCACCAGGTTCAAC+TGG | - | chr1_3:2565995-2566014 | Msa0096860:CDS | 60.0% | |
| GGAGGTCAGGGTCAGGTAGT+TGG | - | chr1_3:2566037-2566056 | Msa0096860:CDS | 60.0% | |
| GGTCAGGGTCAGGTAGTTGG+AGG | - | chr1_3:2566040-2566059 | Msa0096860:CDS | 60.0% | |
| GGATCGCCTCCACCAGGAAT+TGG | - | chr1_3:2566223-2566242 | Msa0096860:CDS | 60.0% | |
| TGGAGGGCAGATGGGACATG+AGG | - | chr1_3:2566324-2566343 | Msa0096860:CDS | 60.0% | |
| TGGGACATGAGGCTCTTGCC+TGG | - | chr1_3:2566335-2566354 | Msa0096860:CDS | 60.0% | |
| GGGACATGAGGCTCTTGCCT+GGG | - | chr1_3:2566336-2566355 | Msa0096860:CDS | 60.0% | |
| CTTGCCTGGGCTGTTGCTCA+TGG | - | chr1_3:2566349-2566368 | Msa0096860:CDS | 60.0% | |
| CTACCTGGTCCTGCTCCACC+AGG | - | chr1_3:2565986-2566005 | Msa0096860:CDS | 65.0% | |
| GAACCTGGTGGAGCAGGACC+AGG | + | chr1_3:2565992-2566011 | None:intergenic | 65.0% | |
| CTTGGCTGGAGGTCAGGGTC+AGG | - | chr1_3:2566030-2566049 | Msa0096860:CDS | 65.0% | |
| TGCACACCTCCCGCAGAACC+AGG | + | chr1_3:2566184-2566203 | None:intergenic | 65.0% | |
| ! | GGTTCTGCGGGAGGTGTGCA+AGG | - | chr1_3:2566184-2566203 | Msa0096860:CDS | 65.0% |
| ! | TCTGCGGGAGGTGTGCAAGG+TGG | - | chr1_3:2566187-2566206 | Msa0096860:CDS | 65.0% |
| !! | GTGCAAGGTGGAGGAGCGTC+TGG | - | chr1_3:2566199-2566218 | Msa0096860:CDS | 65.0% |
| !! | CAAGGTGGAGGAGCGTCTGG+TGG | - | chr1_3:2566202-2566221 | Msa0096860:CDS | 65.0% |
| ! | TCTGGTGGATCGCCTCCACC+AGG | - | chr1_3:2566217-2566236 | Msa0096860:CDS | 65.0% |
| CTACCTGGTCCTGCTCCACC+AGG | - | chr1_3:2565986-2566005 | Msa0096860:CDS | 65.0% | |
| GAACCTGGTGGAGCAGGACC+AGG | + | chr1_3:2565992-2566011 | None:intergenic | 65.0% | |
| CTTGGCTGGAGGTCAGGGTC+AGG | - | chr1_3:2566030-2566049 | Msa0096860:CDS | 65.0% | |
| TGCACACCTCCCGCAGAACC+AGG | + | chr1_3:2566184-2566203 | None:intergenic | 65.0% | |
| ! | GGTTCTGCGGGAGGTGTGCA+AGG | - | chr1_3:2566184-2566203 | Msa0096860:CDS | 65.0% |
| ! | TCTGCGGGAGGTGTGCAAGG+TGG | - | chr1_3:2566187-2566206 | Msa0096860:CDS | 65.0% |
| !! | GTGCAAGGTGGAGGAGCGTC+TGG | - | chr1_3:2566199-2566218 | Msa0096860:CDS | 65.0% |
| !! | CAAGGTGGAGGAGCGTCTGG+TGG | - | chr1_3:2566202-2566221 | Msa0096860:CDS | 65.0% |
| ! | TCTGGTGGATCGCCTCCACC+AGG | - | chr1_3:2566217-2566236 | Msa0096860:CDS | 65.0% |
| !! | GAAGGGCCTGGTTCTGCGGG+AGG | - | chr1_3:2566175-2566194 | Msa0096860:CDS | 70.0% |
| ! | GCGGGAGGTGTGCAAGGTGG+AGG | - | chr1_3:2566190-2566209 | Msa0096860:CDS | 70.0% |
| !! | GAAGGGCCTGGTTCTGCGGG+AGG | - | chr1_3:2566175-2566194 | Msa0096860:CDS | 70.0% |
| ! | GCGGGAGGTGTGCAAGGTGG+AGG | - | chr1_3:2566190-2566209 | Msa0096860:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 2565518 | 2566387 | 2565518 | ID=Msa0096860;Name=Msa0096860 |
| chr1_3 | mRNA | 2565518 | 2566387 | 2565518 | ID=Msa0096860-mRNA-1;Parent=Msa0096860;Name=Msa0096860-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|1|1|0|289 |
| chr1_3 | exon | 2565518 | 2566387 | 2565518 | ID=Msa0096860-mRNA-1:exon:678;Parent=Msa0096860-mRNA-1 |
| chr1_3 | CDS | 2565518 | 2566387 | 2565518 | ID=Msa0096860-mRNA-1:cds;Parent=Msa0096860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
