Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219810 | XP_003597042.1 | 81.992 | 261 | 8 | 2 | 1 | 223 | 1 | 260 | 1.19e-139 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219810 | sp|Q9C682|BH115_ARATH | 58.564 | 181 | 65 | 4 | 51 | 223 | 48 | 226 | 1.13e-64 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219810 | G7IKM3 | 81.992 | 261 | 8 | 2 | 1 | 223 | 1 | 260 | 5.68e-140 | 401 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0219810 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004900 | Msa0219810 | 0.818611 | 1.791047e-52 | -8.615850e-47 |
| Msa0021400 | Msa0219810 | 0.800336 | 1.511735e-48 | -8.615850e-47 |
| Msa0021870 | Msa0219810 | 0.808323 | 3.277084e-50 | -8.615850e-47 |
| Msa0024650 | Msa0219810 | 0.823015 | 1.738893e-53 | -8.615850e-47 |
| Msa0031650 | Msa0219810 | 0.800593 | 1.339914e-48 | -8.615850e-47 |
| Msa0038010 | Msa0219810 | 0.839408 | 1.612961e-57 | -8.615850e-47 |
| Msa0048380 | Msa0219810 | 0.801057 | 1.077323e-48 | -8.615850e-47 |
| Msa0053360 | Msa0219810 | -0.801249 | 9.842165e-49 | -8.615850e-47 |
| Msa0069480 | Msa0219810 | 0.807488 | 4.932085e-50 | -8.615850e-47 |
| Msa0078160 | Msa0219810 | -0.806519 | 7.907680e-50 | -8.615850e-47 |
| Msa0080010 | Msa0219810 | 0.828899 | 6.957218e-55 | -8.615850e-47 |
| Msa0084190 | Msa0219810 | 0.822334 | 2.504415e-53 | -8.615850e-47 |
| Msa0085710 | Msa0219810 | 0.832356 | 9.908109e-56 | -8.615850e-47 |
| Msa0096860 | Msa0219810 | 0.838239 | 3.236073e-57 | -8.615850e-47 |
| Msa0111000 | Msa0219810 | -0.801479 | 8.831200e-49 | -8.615850e-47 |
| Msa0120450 | Msa0219810 | 0.819881 | 9.202409e-53 | -8.615850e-47 |
| Msa0130360 | Msa0219810 | 0.828062 | 1.107738e-54 | -8.615850e-47 |
| Msa0132080 | Msa0219810 | -0.805398 | 1.360984e-49 | -8.615850e-47 |
| Msa0132250 | Msa0219810 | 0.839028 | 2.023736e-57 | -8.615850e-47 |
| Msa0136090 | Msa0219810 | 0.811907 | 5.534422e-51 | -8.615850e-47 |
| Msa0154750 | Msa0219810 | 0.816316 | 5.890221e-52 | -8.615850e-47 |
| Msa0163370 | Msa0219810 | 0.803085 | 4.124987e-49 | -8.615850e-47 |
| Msa0163690 | Msa0219810 | 0.825741 | 3.973473e-54 | -8.615850e-47 |
| Msa0175060 | Msa0219810 | 0.837742 | 4.343509e-57 | -8.615850e-47 |
| Msa0188560 | Msa0219810 | 0.823172 | 1.598224e-53 | -8.615850e-47 |
| Msa0191100 | Msa0219810 | 0.806579 | 7.680159e-50 | -8.615850e-47 |
| Msa0218140 | Msa0219810 | 0.801819 | 7.520519e-49 | -8.615850e-47 |
| Msa0218430 | Msa0219810 | -0.817318 | 3.508938e-52 | -8.615850e-47 |
| Msa0219810 | Msa0223050 | 0.829673 | 4.512816e-55 | -8.615850e-47 |
| Msa0219810 | Msa0230920 | 0.816768 | 4.664211e-52 | -8.615850e-47 |
| Msa0219810 | Msa0239610 | -0.818403 | 1.996609e-52 | -8.615850e-47 |
| Msa0219810 | Msa0244310 | 0.800432 | 1.445350e-48 | -8.615850e-47 |
| Msa0219810 | Msa0245660 | 0.811264 | 7.637657e-51 | -8.615850e-47 |
| Msa0219810 | Msa0247780 | 0.814223 | 1.718551e-51 | -8.615850e-47 |
| Msa0219810 | Msa0248320 | 0.816516 | 5.311843e-52 | -8.615850e-47 |
| Msa0219810 | Msa0258740 | 0.812597 | 3.913898e-51 | -8.615850e-47 |
| Msa0219810 | Msa0264220 | 0.816743 | 4.724212e-52 | -8.615850e-47 |
| Msa0219810 | Msa0270730 | -0.806929 | 6.477482e-50 | -8.615850e-47 |
| Msa0219810 | Msa0278080 | -0.802196 | 6.290829e-49 | -8.615850e-47 |
| Msa0219810 | Msa0280160 | 0.801507 | 8.716988e-49 | -8.615850e-47 |
| Msa0219810 | Msa0282830 | 0.800245 | 1.577705e-48 | -8.615850e-47 |
| Msa0219810 | Msa0297270 | -0.804806 | 1.810484e-49 | -8.615850e-47 |
| Msa0219810 | Msa0303900 | 0.816758 | 4.688133e-52 | -8.615850e-47 |
| Msa0219810 | Msa0307630 | 0.808647 | 2.795093e-50 | -8.615850e-47 |
| Msa0219810 | Msa0309490 | -0.821297 | 4.351267e-53 | -8.615850e-47 |
| Msa0219810 | Msa0318360 | 0.801056 | 1.078050e-48 | -8.615850e-47 |
| Msa0219810 | Msa0323090 | 0.806880 | 6.633593e-50 | -8.615850e-47 |
| Msa0219810 | Msa0325260 | 0.810392 | 1.179517e-50 | -8.615850e-47 |
| Msa0219810 | Msa0333770 | 0.827419 | 1.580576e-54 | -8.615850e-47 |
| Msa0219810 | Msa0336430 | 0.805289 | 1.434513e-49 | -8.615850e-47 |
| Msa0219810 | Msa0336520 | 0.806355 | 8.563407e-50 | -8.615850e-47 |
| Msa0219810 | Msa0336640 | 0.825801 | 3.844511e-54 | -8.615850e-47 |
| Msa0219810 | Msa0340270 | 0.812283 | 4.582247e-51 | -8.615850e-47 |
| Msa0219810 | Msa0354600 | 0.805152 | 1.532182e-49 | -8.615850e-47 |
| Msa0219810 | Msa0357470 | 0.809620 | 1.728962e-50 | -8.615850e-47 |
| Msa0219810 | Msa0357510 | 0.806777 | 6.977885e-50 | -8.615850e-47 |
| Msa0219810 | Msa0357530 | 0.804463 | 2.134379e-49 | -8.615850e-47 |
| Msa0219810 | Msa0358470 | 0.818294 | 2.113367e-52 | -8.615850e-47 |
| Msa0219810 | Msa0367350 | 0.800093 | 1.694031e-48 | -8.615850e-47 |
| Msa0219810 | Msa0396700 | 0.800141 | 1.656063e-48 | -8.615850e-47 |
| Msa0219810 | Msa0408830 | -0.803170 | 3.961429e-49 | -8.615850e-47 |
| Msa0219810 | Msa0414480 | 0.823333 | 1.465632e-53 | -8.615850e-47 |
| Msa0219810 | Msa0420280 | -0.816903 | 4.350563e-52 | -8.615850e-47 |
| Msa0219810 | Msa0424220 | -0.800714 | 1.266129e-48 | -8.615850e-47 |
| Msa0219810 | Msa0426030 | 0.800863 | 1.180168e-48 | -8.615850e-47 |
| Msa0219810 | Msa0443040 | 0.802684 | 4.991708e-49 | -8.615850e-47 |
| Msa0219810 | Msa0444400 | 0.810664 | 1.030045e-50 | -8.615850e-47 |
| Msa0219810 | Msa0450890 | -0.800849 | 1.187976e-48 | -8.615850e-47 |
| Msa0219810 | Msa0464620 | 0.807865 | 4.102501e-50 | -8.615850e-47 |
| Msa0219810 | Msa0469770 | -0.807035 | 6.152856e-50 | -8.615850e-47 |
| Msa0219810 | Msa0485210 | -0.805537 | 1.272306e-49 | -8.615850e-47 |
| Msa0219810 | Msa0491800 | 0.803959 | 2.717769e-49 | -8.615850e-47 |
| Msa0219810 | Msa0522810 | -0.806787 | 6.940864e-50 | -8.615850e-47 |
| Msa0219810 | Msa0531040 | 0.814991 | 1.162051e-51 | -8.615850e-47 |
| Msa0219810 | Msa0531080 | 0.804230 | 2.386461e-49 | -8.615850e-47 |
| Msa0219810 | Msa0535570 | 0.812332 | 4.472113e-51 | -8.615850e-47 |
| Msa0219810 | Msa0538650 | 0.814991 | 1.161791e-51 | -8.615850e-47 |
| Msa0219810 | Msa0540640 | 0.816088 | 6.621313e-52 | -8.615850e-47 |
| Msa0219810 | Msa0545680 | 0.813972 | 1.952622e-51 | -8.615850e-47 |
| Msa0219810 | Msa0549170 | 0.801846 | 7.425600e-49 | -8.615850e-47 |
| Msa0219810 | Msa0554660 | 0.807500 | 4.904390e-50 | -8.615850e-47 |
| Msa0219810 | Msa0566490 | 0.801581 | 8.415535e-49 | -8.615850e-47 |
| Msa0219810 | Msa0568920 | 0.819434 | 1.163583e-52 | -8.615850e-47 |
| Msa0219810 | Msa0580410 | -0.800604 | 1.333007e-48 | -8.615850e-47 |
| Msa0219810 | Msa0585720 | -0.802628 | 5.125552e-49 | -8.615850e-47 |
| Msa0219810 | Msa0587730 | 0.824648 | 7.202595e-54 | -8.615850e-47 |
| Msa0219810 | Msa0587930 | 0.832123 | 1.131087e-55 | -8.615850e-47 |
| Msa0219810 | Msa0591490 | 0.801277 | 9.716208e-49 | -8.615850e-47 |
| Msa0219810 | Msa0598470 | -0.800043 | 1.734324e-48 | -8.615850e-47 |
| Msa0219810 | Msa0604280 | 0.827526 | 1.490209e-54 | -8.615850e-47 |
| Msa0219810 | Msa0606600 | 0.802366 | 5.805212e-49 | -8.615850e-47 |
| Msa0219810 | Msa0622890 | 0.852451 | 4.577346e-61 | -8.615850e-47 |
| Msa0219810 | Msa0631700 | 0.815365 | 9.598292e-52 | -8.615850e-47 |
| Msa0219810 | Msa0638300 | -0.823178 | 1.593138e-53 | -8.615850e-47 |
| Msa0219810 | Msa0641700 | 0.807202 | 5.672380e-50 | -8.615850e-47 |
| Msa0219810 | Msa0643230 | 0.814449 | 1.532278e-51 | -8.615850e-47 |
| Msa0219810 | Msa0647300 | 0.812435 | 4.246438e-51 | -8.615850e-47 |
| Msa0219810 | Msa0658150 | 0.807862 | 4.107282e-50 | -8.615850e-47 |
| Msa0219810 | Msa0659230 | 0.802305 | 5.975781e-49 | -8.615850e-47 |
| Msa0219810 | Msa0662230 | -0.808758 | 2.645912e-50 | -8.615850e-47 |
| Msa0219810 | Msa0663580 | -0.805625 | 1.219842e-49 | -8.615850e-47 |
| Msa0219810 | Msa0667620 | 0.803111 | 4.074379e-49 | -8.615850e-47 |
| Msa0219810 | Msa0667840 | -0.806494 | 8.007011e-50 | -8.615850e-47 |
| Msa0219810 | Msa0672780 | 0.820272 | 7.486068e-53 | -8.615850e-47 |
| Msa0219810 | Msa0680460 | 0.831090 | 2.033077e-55 | -8.615850e-47 |
| Msa0219810 | Msa0685080 | 0.806490 | 8.021474e-50 | -8.615850e-47 |
| Msa0219810 | Msa0686830 | 0.814375 | 1.590691e-51 | -8.615850e-47 |
| Msa0219810 | Msa0689840 | 0.813605 | 2.351526e-51 | -8.615850e-47 |
| Msa0219810 | Msa0703000 | 0.808623 | 2.827310e-50 | -8.615850e-47 |
| Msa0219810 | Msa0708020 | 0.802723 | 4.900169e-49 | -8.615850e-47 |
| Msa0219810 | Msa0711240 | 0.817551 | 3.109924e-52 | -8.615850e-47 |
| Msa0219810 | Msa0714230 | -0.818463 | 1.934515e-52 | -8.615850e-47 |
| Msa0219810 | Msa0715250 | 0.805905 | 1.065335e-49 | -8.615850e-47 |
| Msa0219810 | Msa0716980 | 0.826062 | 3.332873e-54 | -8.615850e-47 |
| Msa0219810 | Msa0717030 | 0.822955 | 1.795743e-53 | -8.615850e-47 |
| Msa0219810 | Msa0717540 | -0.800643 | 1.308794e-48 | -8.615850e-47 |
| Msa0219810 | Msa0719330 | -0.805259 | 1.455322e-49 | -8.615850e-47 |
| Msa0219810 | Msa0720810 | 0.814076 | 1.852320e-51 | -8.615850e-47 |
| Msa0219810 | Msa0730890 | 0.800074 | 1.709236e-48 | -8.615850e-47 |
| Msa0219810 | Msa0743370 | 0.819758 | 9.817695e-53 | -8.615850e-47 |
| Msa0219810 | Msa0758150 | 0.815037 | 1.135059e-51 | -8.615850e-47 |
| Msa0219810 | Msa0758880 | -0.802006 | 6.884208e-49 | -8.615850e-47 |
| Msa0219810 | Msa0772160 | -0.803278 | 3.762117e-49 | -8.615850e-47 |
| Msa0219810 | Msa0773030 | 0.815213 | 1.037524e-51 | -8.615850e-47 |
| Msa0219810 | Msa0777210 | 0.801387 | 9.221387e-49 | -8.615850e-47 |
| Msa0219810 | Msa0792410 | 0.807386 | 5.184313e-50 | -8.615850e-47 |
| Msa0219810 | Msa0794090 | 0.813099 | 3.037815e-51 | -8.615850e-47 |
| Msa0219810 | Msa0803310 | 0.809144 | 2.188032e-50 | -8.615850e-47 |
| Msa0219810 | Msa0814350 | 0.813591 | 2.368731e-51 | -8.615850e-47 |
| Msa0219810 | Msa0814660 | 0.821082 | 4.878955e-53 | -8.615850e-47 |
| Msa0219810 | Msa0817100 | 0.830861 | 2.313434e-55 | -8.615850e-47 |
| Msa0219810 | Msa0822680 | -0.806297 | 8.806465e-50 | -8.615850e-47 |
| Msa0219810 | Msa0828350 | 0.800721 | 1.261855e-48 | -8.615850e-47 |
| Msa0219810 | Msa0829250 | -0.803354 | 3.628962e-49 | -8.615850e-47 |
| Msa0219810 | Msa0831320 | 0.803726 | 3.037575e-49 | -8.615850e-47 |
| Msa0219810 | Msa0833360 | -0.801560 | 8.499192e-49 | -8.615850e-47 |
| Msa0219810 | Msa0841930 | 0.806699 | 7.246577e-50 | -8.615850e-47 |
| Msa0219810 | Msa0846870 | 0.801436 | 9.011124e-49 | -8.615850e-47 |
| Msa0219810 | Msa0847140 | 0.824698 | 7.008870e-54 | -8.615850e-47 |
| Msa0219810 | Msa0848720 | -0.821493 | 3.921688e-53 | -8.615850e-47 |
| Msa0219810 | Msa0854860 | 0.813481 | 2.504320e-51 | -8.615850e-47 |
| Msa0219810 | Msa0871790 | -0.824411 | 8.190533e-54 | -8.615850e-47 |
| Msa0219810 | Msa0873880 | 0.808784 | 2.612521e-50 | -8.615850e-47 |
| Msa0219810 | Msa0876030 | -0.806404 | 8.361118e-50 | -8.615850e-47 |
| Msa0219810 | Msa0890210 | 0.845349 | 4.294024e-59 | -8.615850e-47 |
| Msa0219810 | Msa0896920 | 0.847061 | 1.467698e-59 | -8.615850e-47 |
| Msa0219810 | Msa0906680 | 0.805477 | 1.310269e-49 | -8.615850e-47 |
| Msa0219810 | Msa0925630 | -0.801851 | 7.407672e-49 | -8.615850e-47 |
| Msa0219810 | Msa0937160 | -0.805179 | 1.512576e-49 | -8.615850e-47 |
| Msa0219810 | Msa0950090 | 0.829790 | 4.225914e-55 | -8.615850e-47 |
| Msa0219810 | Msa0975950 | 0.816189 | 6.286372e-52 | -8.615850e-47 |
| Msa0219810 | Msa0980980 | -0.807803 | 4.228916e-50 | -8.615850e-47 |
| Msa0219810 | Msa0987020 | 0.801331 | 9.470815e-49 | -8.615850e-47 |
| Msa0219810 | Msa0987550 | 0.808866 | 2.509318e-50 | -8.615850e-47 |
| Msa0219810 | Msa0996980 | 0.805843 | 1.097742e-49 | -8.615850e-47 |
| Msa0219810 | Msa1005370 | 0.830329 | 3.121912e-55 | -8.615850e-47 |
| Msa0219810 | Msa1020160 | -0.801107 | 1.052552e-48 | -8.615850e-47 |
| Msa0219810 | Msa1024420 | 0.833784 | 4.371353e-56 | -8.615850e-47 |
| Msa0219810 | Msa1026490 | 0.800484 | 1.410455e-48 | -8.615850e-47 |
| Msa0219810 | Msa1031060 | 0.822737 | 2.018703e-53 | -8.615850e-47 |
| Msa0219810 | Msa1036590 | 0.825029 | 5.856655e-54 | -8.615850e-47 |
| Msa0219810 | Msa1041910 | 0.802510 | 5.421966e-49 | -8.615850e-47 |
| Msa0219810 | Msa1044050 | -0.807619 | 4.625929e-50 | -8.615850e-47 |
| Msa0219810 | Msa1047300 | 0.833735 | 4.497098e-56 | -8.615850e-47 |
| Msa0219810 | Msa1047340 | 0.834059 | 3.729681e-56 | -8.615850e-47 |
| Msa0219810 | Msa1048390 | 0.800391 | 1.473172e-48 | -8.615850e-47 |
| Msa0219810 | Msa1049400 | 0.811277 | 7.585752e-51 | -8.615850e-47 |
| Msa0219810 | Msa1061670 | 0.809076 | 2.262425e-50 | -8.615850e-47 |
| Msa0219810 | Msa1063260 | 0.826400 | 2.769658e-54 | -8.615850e-47 |
| Msa0219810 | Msa1064940 | 0.802604 | 5.184000e-49 | -8.615850e-47 |
| Msa0219810 | Msa1075030 | 0.805626 | 1.219192e-49 | -8.615850e-47 |
| Msa0219810 | Msa1076900 | 0.828433 | 9.014603e-55 | -8.615850e-47 |
| Msa0219810 | Msa1084800 | 0.811356 | 7.294257e-51 | -8.615850e-47 |
| Msa0219810 | Msa1087200 | 0.819587 | 1.074150e-52 | -8.615850e-47 |
| Msa0219810 | Msa1099640 | 0.805712 | 1.169615e-49 | -8.615850e-47 |
| Msa0219810 | Msa1100330 | 0.816722 | 4.775836e-52 | -8.615850e-47 |
| Msa0219810 | Msa1106960 | 0.806349 | 8.587493e-50 | -8.615850e-47 |
| Msa0219810 | Msa1107520 | 0.813123 | 3.001601e-51 | -8.615850e-47 |
| Msa0219810 | Msa1108610 | 0.827072 | 1.914532e-54 | -8.615850e-47 |
| Msa0219810 | Msa1109540 | 0.814720 | 1.334422e-51 | -8.615850e-47 |
| Msa0219810 | Msa1111650 | 0.802524 | 5.384472e-49 | -8.615850e-47 |
| Msa0219810 | Msa1111910 | 0.800305 | 1.534274e-48 | -8.615850e-47 |
| Msa0219810 | Msa1115900 | 0.837024 | 6.635319e-57 | -8.615850e-47 |
| Msa0219810 | Msa1119670 | 0.822052 | 2.912107e-53 | -8.615850e-47 |
| Msa0219810 | Msa1122550 | 0.824447 | 8.030113e-54 | -8.615850e-47 |
| Msa0219810 | Msa1124220 | 0.804232 | 2.384761e-49 | -8.615850e-47 |
| Msa0219810 | Msa1131070 | 0.808411 | 3.138220e-50 | -8.615850e-47 |
| Msa0219810 | Msa1133850 | 0.806526 | 7.883401e-50 | -8.615850e-47 |
| Msa0219810 | Msa1138110 | 0.801280 | 9.702267e-49 | -8.615850e-47 |
| Msa0219810 | Msa1140480 | -0.810637 | 1.043981e-50 | -8.615850e-47 |
| Msa0219810 | Msa1152330 | 0.816569 | 5.167683e-52 | -8.615850e-47 |
| Msa0219810 | Msa1160540 | 0.816149 | 6.416083e-52 | -8.615850e-47 |
| Msa0219810 | Msa1162370 | 0.822201 | 2.689151e-53 | -8.615850e-47 |
| Msa0219810 | Msa1182530 | -0.838541 | 2.704240e-57 | -8.615850e-47 |
| Msa0219810 | Msa1187750 | 0.812998 | 3.197380e-51 | -8.615850e-47 |
| Msa0219810 | Msa1191350 | 0.809857 | 1.538167e-50 | -8.615850e-47 |
| Msa0219810 | Msa1191530 | -0.812863 | 3.421910e-51 | -8.615850e-47 |
| Msa0219810 | Msa1202220 | -0.809248 | 2.078225e-50 | -8.615850e-47 |
| Msa0219810 | Msa1221270 | 0.804836 | 1.784187e-49 | -8.615850e-47 |
| Msa0219810 | Msa1223710 | 0.809389 | 1.938474e-50 | -8.615850e-47 |
| Msa0219810 | Msa1238250 | 0.808098 | 3.659312e-50 | -8.615850e-47 |
| Msa0219810 | Msa1255030 | -0.803786 | 2.952478e-49 | -8.615850e-47 |
| Msa0219810 | Msa1259570 | 0.802625 | 5.132889e-49 | -8.615850e-47 |
| Msa0219810 | Msa1263370 | 0.806661 | 7.381968e-50 | -8.615850e-47 |
| Msa0219810 | Msa1269200 | 0.803388 | 3.570849e-49 | -8.615850e-47 |
| Msa0219810 | Msa1269500 | 0.833654 | 4.710779e-56 | -8.615850e-47 |
| Msa0219810 | Msa1270860 | -0.813936 | 1.988430e-51 | -8.615850e-47 |
| Msa0219810 | Msa1273320 | 0.804430 | 2.168496e-49 | -8.615850e-47 |
| Msa0219810 | Msa1281780 | 0.806692 | 7.271640e-50 | -8.615850e-47 |
| Msa0219810 | Msa1283980 | 0.801325 | 9.496034e-49 | -8.615850e-47 |
| Msa0219810 | Msa1290090 | -0.802488 | 5.477307e-49 | -8.615850e-47 |
| Msa0219810 | Msa1298060 | 0.806107 | 9.658987e-50 | -8.615850e-47 |
| Msa0219810 | Msa1308010 | -0.811928 | 5.477214e-51 | -8.615850e-47 |
| Msa0219810 | Msa1319030 | 0.811024 | 8.608377e-51 | -8.615850e-47 |
| Msa0219810 | Msa1321010 | 0.830100 | 3.551693e-55 | -8.615850e-47 |
| Msa0219810 | Msa1335210 | -0.808402 | 3.151800e-50 | -8.615850e-47 |
| Msa0219810 | Msa1338510 | 0.820452 | 6.809055e-53 | -8.615850e-47 |
| Msa0219810 | Msa1339530 | 0.810920 | 9.068116e-51 | -8.615850e-47 |
| Msa0219810 | Msa1357840 | 0.839516 | 1.512548e-57 | -8.615850e-47 |
| Msa0219810 | Msa1362520 | 0.817112 | 3.903761e-52 | -8.615850e-47 |
| Msa0219810 | Msa1362590 | 0.811324 | 7.413294e-51 | -8.615850e-47 |
| Msa0219810 | Msa1363690 | 0.820139 | 8.032291e-53 | -8.615850e-47 |
| Msa0219810 | Msa1369390 | -0.807021 | 6.196017e-50 | -8.615850e-47 |
| Msa0219810 | Msa1376520 | 0.818687 | 1.721473e-52 | -8.615850e-47 |
| Msa0219810 | Msa1377190 | 0.846773 | 1.759932e-59 | -8.615850e-47 |
| Msa0219810 | Msa1377460 | 0.829668 | 4.526853e-55 | -8.615850e-47 |
| Msa0219810 | Msa1378950 | 0.831572 | 1.546854e-55 | -8.615850e-47 |
| Msa0219810 | Msa1379270 | -0.801713 | 7.907422e-49 | -8.615850e-47 |
| Msa0219810 | Msa1380740 | 0.800001 | 1.768562e-48 | -8.615850e-47 |
| Msa0219810 | Msa1384130 | 0.808832 | 2.551637e-50 | -8.615850e-47 |
| Msa0219810 | Msa1390040 | 0.812629 | 3.851762e-51 | -8.615850e-47 |
| Msa0219810 | Msa1395080 | 0.808725 | 2.688878e-50 | -8.615850e-47 |
| Msa0219810 | Msa1396550 | 0.809752 | 1.620045e-50 | -8.615850e-47 |
| Msa0219810 | Msa1409060 | 0.819597 | 1.068202e-52 | -8.615850e-47 |
| Msa0219810 | Msa1409600 | 0.809860 | 1.535271e-50 | -8.615850e-47 |
| Msa0219810 | Msa1417220 | 0.848063 | 7.778657e-60 | -8.615850e-47 |
| Msa0219810 | Msa1427600 | -0.810147 | 1.331652e-50 | -8.615850e-47 |
| Msa0219810 | Msa1429190 | 0.811299 | 7.506413e-51 | -8.615850e-47 |
| Msa0219810 | Msa1430630 | -0.831909 | 1.277880e-55 | -8.615850e-47 |
| Msa0219810 | Msa1445780 | 0.816864 | 4.438171e-52 | -8.615850e-47 |
| Msa0219810 | Msa1446090 | 0.800447 | 1.435419e-48 | -8.615850e-47 |
| Msa0219810 | Msa1453540 | -0.810916 | 9.087244e-51 | -8.615850e-47 |
| Msa0219810 | Msa1458270 | 0.805185 | 1.507879e-49 | -8.615850e-47 |
| Msa0219810 | Msa1462610 | 0.810632 | 1.046624e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219810 | MtrunA17_Chr2g0323031 | 81.992 | 261 | 8 | 2 | 1 | 223 | 1 | 260 | 1.09e-143 | 401 |
| Msa0219810 | MtrunA17_Chr4g0042041 | 53.191 | 235 | 81 | 6 | 12 | 223 | 9 | 237 | 5.71e-74 | 224 |
| Msa0219810 | MtrunA17_Chr2g0319301 | 53.879 | 232 | 77 | 6 | 12 | 223 | 9 | 230 | 1.35e-72 | 220 |
| Msa0219810 | MtrunA17_Chr1g0167821 | 47.458 | 177 | 91 | 2 | 49 | 223 | 70 | 246 | 5.36e-44 | 147 |
| Msa0219810 | MtrunA17_Chr4g0038511 | 44.330 | 97 | 53 | 1 | 71 | 167 | 9 | 104 | 6.72e-19 | 82.8 |
| Msa0219810 | MtrunA17_Chr1g0161461 | 43.617 | 94 | 52 | 1 | 73 | 166 | 82 | 174 | 7.73e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219810 | AT1G51070.1 | 58.564 | 181 | 65 | 4 | 51 | 223 | 48 | 226 | 1.15e-65 | 202 |
| Msa0219810 | AT5G54680.1 | 59.091 | 176 | 63 | 4 | 57 | 223 | 59 | 234 | 1.25e-64 | 200 |
| Msa0219810 | AT1G51070.2 | 58.564 | 181 | 65 | 4 | 51 | 223 | 114 | 292 | 1.44e-64 | 202 |
| Msa0219810 | AT4G14410.1 | 46.927 | 179 | 88 | 4 | 48 | 223 | 109 | 283 | 9.46e-43 | 145 |
| Msa0219810 | AT4G14410.2 | 48.352 | 182 | 81 | 6 | 48 | 223 | 103 | 277 | 1.11e-42 | 145 |
| Msa0219810 | AT4G14410.3 | 48.352 | 182 | 81 | 6 | 48 | 223 | 103 | 277 | 1.11e-42 | 145 |
| Msa0219810 | AT3G23210.2 | 48.588 | 177 | 73 | 3 | 58 | 223 | 122 | 291 | 3.98e-40 | 139 |
| Msa0219810 | AT3G23210.1 | 48.588 | 177 | 73 | 3 | 58 | 223 | 151 | 320 | 5.66e-40 | 139 |
| Msa0219810 | AT3G19860.2 | 43.220 | 118 | 62 | 2 | 51 | 164 | 37 | 153 | 1.80e-18 | 82.8 |
| Msa0219810 | AT3G19860.1 | 46.809 | 94 | 49 | 1 | 71 | 164 | 8 | 100 | 7.18e-18 | 80.5 |
| Msa0219810 | AT3G19860.3 | 46.809 | 94 | 49 | 1 | 71 | 164 | 39 | 131 | 1.00e-17 | 80.5 |
| Msa0219810 | AT4G36060.2 | 44.792 | 96 | 52 | 1 | 69 | 164 | 27 | 121 | 2.69e-17 | 78.6 |
| Msa0219810 | AT4G36060.4 | 44.792 | 96 | 52 | 1 | 69 | 164 | 27 | 121 | 2.81e-17 | 78.6 |
| Msa0219810 | AT4G36060.3 | 43.878 | 98 | 54 | 1 | 69 | 166 | 45 | 141 | 6.39e-17 | 77.8 |
| Msa0219810 | AT4G36060.1 | 44.792 | 96 | 52 | 1 | 69 | 164 | 45 | 139 | 6.71e-17 | 77.8 |
Find 70 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACATGATTTAAAGGTTTA+TGG | 0.113264 | 2_1:-67664853 | Msa0219810:intron |
| TCTCAGCTTCATTTCTTAAT+TGG | 0.176160 | 2_1:+67664748 | None:intergenic |
| TATTTCTGCTGCTGATTTCA+TGG | 0.212247 | 2_1:-67666106 | Msa0219810:CDS |
| TCCATTTGGCTCTATGATTA+TGG | 0.214517 | 2_1:-67666144 | Msa0219810:CDS |
| TAGGCTAACCTTGTCAGTTT+TGG | 0.219471 | 2_1:+67664797 | None:intergenic |
| TCACAATAATATTATGGATA+TGG | 0.249624 | 2_1:-67666184 | None:intergenic |
| CCACTGGTGGTTCCTCCATT+TGG | 0.268940 | 2_1:-67666158 | Msa0219810:CDS |
| CTCAGCTTCATTTCTTAATT+GGG | 0.281253 | 2_1:+67664749 | None:intergenic |
| ATGTTATTTGAACAACAATT+TGG | 0.295938 | 2_1:+67663360 | None:intergenic |
| ACTAACAACTTTGTACAATA+AGG | 0.314876 | 2_1:+67663640 | None:intergenic |
| CACTTTCTCACGACCTGCCT+TGG | 0.343619 | 2_1:+67664968 | None:intergenic |
| ATGCCTTTCATTGGTTATCC+TGG | 0.370469 | 2_1:-67663766 | Msa0219810:CDS |
| TGCTAACCACTTTAAGCAAC+TGG | 0.372348 | 2_1:+67663676 | None:intergenic |
| CTCGAACCGCATCATTTAAT+AGG | 0.378908 | 2_1:+67664778 | None:intergenic |
| CTCCTGCTTCTGCTTTCACC+TGG | 0.385039 | 2_1:-67666065 | Msa0219810:CDS |
| CACAAGCTGATGCCTTTCAT+TGG | 0.397178 | 2_1:-67663775 | Msa0219810:CDS |
| GGTTCATGAAGTGTTAGATT+TGG | 0.398133 | 2_1:-67663553 | Msa0219810:three_prime_UTR |
| GATGCCTCAGCCTCAGTCTC+AGG | 0.418685 | 2_1:-67666043 | Msa0219810:CDS |
| AACTGCCACATTGAAATTCC+AGG | 0.421296 | 2_1:+67663748 | None:intergenic |
| GAAGCTAGACAAAGAAAAGT+TGG | 0.439259 | 2_1:-67663875 | Msa0219810:CDS |
| CATGAACCACGGGTGCGAAC+TGG | 0.441058 | 2_1:+67663568 | None:intergenic |
| CGACCTCCAGTTGCTTAAAG+TGG | 0.445912 | 2_1:-67663682 | Msa0219810:exon |
| CAAAGAAAAGTTGGAGCAGC+AGG | 0.452011 | 2_1:-67663866 | Msa0219810:CDS |
| TCCTTTAGCAGCCATGGCAT+TGG | 0.463282 | 2_1:+67663810 | None:intergenic |
| ACCCTCCTTCCTCTCATATG+AGG | 0.478847 | 2_1:-67666008 | Msa0219810:intron |
| AAGCAACTGGAGGTCGAAGC+AGG | 0.492222 | 2_1:+67663689 | None:intergenic |
| TCCAATGCCATGGCTGCTAA+AGG | 0.493863 | 2_1:-67663811 | Msa0219810:CDS |
| ATGGCTGCTAAAGGACCAAC+TGG | 0.500289 | 2_1:-67663802 | Msa0219810:CDS |
| TGTTCAAATCTACATGTAGT+TGG | 0.502227 | 2_1:-67663432 | Msa0219810:three_prime_UTR |
| GAAGGGATAAATTGAATGAC+AGG | 0.502758 | 2_1:-67664944 | Msa0219810:intron |
| ATCCAGGTGAAAGCAGAAGC+AGG | 0.503544 | 2_1:+67666063 | None:intergenic |
| AAATTCGACAACTTCTTACA+TGG | 0.505037 | 2_1:-67663595 | Msa0219810:three_prime_UTR |
| AGACTGAGGCTGAGGCATCC+AGG | 0.513096 | 2_1:+67666047 | None:intergenic |
| ATTTGAACACTTGAAAATTG+TGG | 0.518101 | 2_1:+67663446 | None:intergenic |
| AGTTGGTCCTTTAGCAGCCA+TGG | 0.520788 | 2_1:+67663804 | None:intergenic |
| GCCATAATCATAGAGCCAAA+TGG | 0.530360 | 2_1:+67666143 | None:intergenic |
| ATCAGCTTGTGGTTACCAGT+TGG | 0.540943 | 2_1:+67663787 | None:intergenic |
| AAATGAAGCTGAGAGGCTAA+AGG | 0.557384 | 2_1:-67664739 | Msa0219810:CDS |
| TAGCTTCCTCTCCAATGCCA+TGG | 0.572853 | 2_1:-67663821 | Msa0219810:CDS |
| ATGGATATGGATTCCACTGG+TGG | 0.573000 | 2_1:-67666171 | Msa0219810:CDS |
| AAGGACAAAGTGAATCACTT+AGG | 0.573560 | 2_1:+67663295 | None:intergenic |
| AACTTTGTACAATAAGGAAG+TGG | 0.574450 | 2_1:+67663646 | None:intergenic |
| TGAGCCTGAGACTGAGGCTG+AGG | 0.575513 | 2_1:+67666039 | None:intergenic |
| ATTCCAGGATAACCAATGAA+AGG | 0.593758 | 2_1:+67663763 | None:intergenic |
| AAGCTGAGAGGCTAAAGGAA+AGG | 0.594000 | 2_1:-67664734 | Msa0219810:CDS |
| TATGCATCTAGCTCCAAGGC+AGG | 0.594326 | 2_1:-67664981 | Msa0219810:CDS |
| TGCTGCAGTTGATACATCAC+AGG | 0.594554 | 2_1:-67663716 | Msa0219810:CDS |
| ATCTAACACTTCATGAACCA+CGG | 0.596586 | 2_1:+67663557 | None:intergenic |
| CAATGAAAGGCATCAGCTTG+TGG | 0.597079 | 2_1:+67663776 | None:intergenic |
| ATGATATGAGCCTGAGACTG+AGG | 0.597314 | 2_1:+67666033 | None:intergenic |
| ACCTCATATGAGAGGAAGGA+GGG | 0.598698 | 2_1:+67666007 | None:intergenic |
| AGTCACCTCATATGAGAGGA+AGG | 0.600170 | 2_1:+67666003 | None:intergenic |
| GGTTAACCAGTTCGCACCCG+TGG | 0.600674 | 2_1:-67663574 | Msa0219810:three_prime_UTR |
| TCTAACACTTCATGAACCAC+GGG | 0.603321 | 2_1:+67663558 | None:intergenic |
| CCAAATGGAGGAACCACCAG+TGG | 0.607270 | 2_1:+67666158 | None:intergenic |
| ATTATGGATATGGATTCCAC+TGG | 0.611334 | 2_1:-67666174 | Msa0219810:CDS |
| ATCATATGCATCTAGCTCCA+AGG | 0.614949 | 2_1:-67664985 | Msa0219810:CDS |
| TGTGATGTATCAACTGCAGC+AGG | 0.617840 | 2_1:+67663718 | None:intergenic |
| GGTTAGCCTATTAAATGATG+CGG | 0.622213 | 2_1:-67664784 | Msa0219810:CDS |
| ATTAAATGATGCGGTTCGAG+TGG | 0.625785 | 2_1:-67664775 | Msa0219810:CDS |
| TCAAAGTCACCTCATATGAG+AGG | 0.629158 | 2_1:+67665999 | None:intergenic |
| TAGCAGCCATGGCATTGGAG+AGG | 0.631338 | 2_1:+67663815 | None:intergenic |
| AGGTCGTGAGAAAGTGCGAA+GGG | 0.647351 | 2_1:-67664961 | Msa0219810:CDS |
| CAGGTCGTGAGAAAGTGCGA+AGG | 0.654075 | 2_1:-67664962 | Msa0219810:CDS |
| TAACCACTTTAAGCAACTGG+AGG | 0.675285 | 2_1:+67663679 | None:intergenic |
| TACGCTGCCCAAAACTGACA+AGG | 0.677310 | 2_1:-67664805 | Msa0219810:CDS |
| ATAATCATAGAGCCAAATGG+AGG | 0.683773 | 2_1:+67666146 | None:intergenic |
| CACCTCATATGAGAGGAAGG+AGG | 0.683814 | 2_1:+67666006 | None:intergenic |
| AATTAAGAAATGAAGCTGAG+AGG | 0.692306 | 2_1:-67664746 | Msa0219810:CDS |
| GTTATCCTGGAATTTCAATG+TGG | 0.692809 | 2_1:-67663753 | Msa0219810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGTAAAAGATATTATATA+CGG | - | chr2_1:67664144-67664163 | Msa0219810:intron | 10.0% |
| !!! | AAGTTATTTCTTAAATTTAT+AGG | - | chr2_1:67665418-67665437 | Msa0219810:intron | 10.0% |
| !!! | AATTTTAAAAACAAACAATA+AGG | + | chr2_1:67666171-67666190 | None:intergenic | 10.0% |
| !!! | GTATATAATATCTTTTACAA+AGG | + | chr2_1:67664145-67664164 | None:intergenic | 15.0% |
| !! | AAAATAAATAACTAGTTGAT+GGG | + | chr2_1:67665101-67665120 | None:intergenic | 15.0% |
| !! | TAAAATAAATAACTAGTTGA+TGG | + | chr2_1:67665102-67665121 | None:intergenic | 15.0% |
| !! | ATATAAAAGATAGATAAAGA+CGG | + | chr2_1:67665170-67665189 | None:intergenic | 15.0% |
| !!! | GATTTTGAATGAATTGATTT+TGG | - | chr2_1:67663532-67663551 | Msa0219810:three_prime_UTR | 20.0% |
| !! | TAAGTTAGACAATAAATTTG+AGG | - | chr2_1:67663593-67663612 | Msa0219810:three_prime_UTR | 20.0% |
| !! | TAAAAGATATTATATACGGT+TGG | - | chr2_1:67664148-67664167 | Msa0219810:intron | 20.0% |
| !! | TTCAATTTGACATGATTTAA+AGG | - | chr2_1:67664584-67664603 | Msa0219810:intron | 20.0% |
| !!! | TTTTTCGTATCTTATTATAG+TGG | - | chr2_1:67664773-67664792 | Msa0219810:CDS | 20.0% |
| !! | AAGTAAACTTACTTATACAA+GGG | + | chr2_1:67664917-67664936 | None:intergenic | 20.0% |
| !! | TAGTAAACTAACTAATATGA+GGG | + | chr2_1:67665205-67665224 | None:intergenic | 20.0% |
| !! | ATAGTAAACTAACTAATATG+AGG | + | chr2_1:67665206-67665225 | None:intergenic | 20.0% |
| !!! | ATTTAAGAAATAACTTGTTC+CGG | + | chr2_1:67665414-67665433 | None:intergenic | 20.0% |
| !! | TAAAGTTATGTTTCCTTTAA+AGG | - | chr2_1:67665509-67665528 | Msa0219810:intron | 20.0% |
| !!! | ATGTTATTTGAACAACAATT+TGG | + | chr2_1:67666087-67666106 | None:intergenic | 20.0% |
| ! | AAAATCAATTGTAGAAACTG+CGG | - | chr2_1:67663619-67663638 | Msa0219810:three_prime_UTR | 25.0% |
| ! | AATACTTTATATTTGCAGCT+TGG | - | chr2_1:67663702-67663721 | Msa0219810:CDS | 25.0% |
| ! | AATGTTGAACGATAAATTTG+AGG | - | chr2_1:67663863-67663882 | Msa0219810:CDS | 25.0% |
| !! | CTTCGAGTTAGAATTAATTA+TGG | - | chr2_1:67663925-67663944 | Msa0219810:intron | 25.0% |
| ! | ATTACTTTATATTAGCAGCA+TGG | - | chr2_1:67664050-67664069 | Msa0219810:intron | 25.0% |
| ! | AAAACAACAATGAATAGAGA+GGG | + | chr2_1:67664391-67664410 | None:intergenic | 25.0% |
| ! | TAATATGCAACTGTAACTTT+AGG | - | chr2_1:67664425-67664444 | Msa0219810:intron | 25.0% |
| ! | TGACATGATTTAAAGGTTTA+TGG | - | chr2_1:67664591-67664610 | Msa0219810:intron | 25.0% |
| ! | CGAAAAAGTTAAAGAACTTA+AGG | - | chr2_1:67664747-67664766 | Msa0219810:CDS | 25.0% |
| ! | AGTAAACTTACTTATACAAG+GGG | + | chr2_1:67664916-67664935 | None:intergenic | 25.0% |
| ! | CAAGTAAACTTACTTATACA+AGG | + | chr2_1:67664918-67664937 | None:intergenic | 25.0% |
| ! | TAAGATGATAACTAGTAGAT+AGG | + | chr2_1:67664961-67664980 | None:intergenic | 25.0% |
| ! | ACTAACAACTTTGTACAATA+AGG | + | chr2_1:67665807-67665826 | None:intergenic | 25.0% |
| ! | ATTTGAACACTTGAAAATTG+TGG | + | chr2_1:67666001-67666020 | None:intergenic | 25.0% |
| AAATCAATTGTAGAAACTGC+GGG | - | chr2_1:67663620-67663639 | Msa0219810:three_prime_UTR | 30.0% | |
| TTATATTTGCAGCTTGGAAA+TGG | - | chr2_1:67663708-67663727 | Msa0219810:CDS | 30.0% | |
| ! | AGATATATTACCGCTTTGAA+GGG | + | chr2_1:67663768-67663787 | None:intergenic | 30.0% |
| AAGATATATTACCGCTTTGA+AGG | + | chr2_1:67663769-67663788 | None:intergenic | 30.0% | |
| CGAGTTAGAATTAATTATGG+TGG | - | chr2_1:67663928-67663947 | Msa0219810:intron | 30.0% | |
| AACACTTCTTGAATCAAGTT+TGG | - | chr2_1:67663964-67663983 | Msa0219810:intron | 30.0% | |
| TTATATTAGCAGCATGGAAA+TGG | - | chr2_1:67664056-67664075 | Msa0219810:intron | 30.0% | |
| ! | AGATATATTACCGCTTTGAA+GGG | + | chr2_1:67663768-67663787 | None:intergenic | 30.0% |
| AAGATATATTACCGCTTTGA+AGG | + | chr2_1:67663769-67663788 | None:intergenic | 30.0% | |
| AGAAAGATGACCTATATACT+CGG | - | chr2_1:67664232-67664251 | Msa0219810:intron | 30.0% | |
| TCTTTAAACACCGAGTATAT+AGG | + | chr2_1:67664245-67664264 | None:intergenic | 30.0% | |
| TGTAACAAAGACAGAGTAAA+AGG | + | chr2_1:67664365-67664384 | None:intergenic | 30.0% | |
| GAAAACAACAATGAATAGAG+AGG | + | chr2_1:67664392-67664411 | None:intergenic | 30.0% | |
| CTCAGCTTCATTTCTTAATT+GGG | + | chr2_1:67664698-67664717 | None:intergenic | 30.0% | |
| TCTCAGCTTCATTTCTTAAT+TGG | + | chr2_1:67664699-67664718 | None:intergenic | 30.0% | |
| AATTAAGAAATGAAGCTGAG+AGG | - | chr2_1:67664698-67664717 | Msa0219810:CDS | 30.0% | |
| GCAAGTAGACTAAATTAAGA+GGG | + | chr2_1:67665059-67665078 | None:intergenic | 30.0% | |
| TGCAAGTAGACTAAATTAAG+AGG | + | chr2_1:67665060-67665079 | None:intergenic | 30.0% | |
| !! | TATTTTAGAAGCTCTGCATA+TGG | + | chr2_1:67665322-67665341 | None:intergenic | 30.0% |
| ATGTGAACAAGTATGAAACA+TGG | - | chr2_1:67665483-67665502 | Msa0219810:intron | 30.0% | |
| AACTTTGTACAATAAGGAAG+TGG | + | chr2_1:67665801-67665820 | None:intergenic | 30.0% | |
| AAATTCGACAACTTCTTACA+TGG | - | chr2_1:67665849-67665868 | Msa0219810:intron | 30.0% | |
| TGTTCAAATCTACATGTAGT+TGG | - | chr2_1:67666012-67666031 | Msa0219810:CDS | 30.0% | |
| ATAATCATAGAGCCAAATGG+AGG | + | chr2_1:67663301-67663320 | None:intergenic | 35.0% | |
| !! | TCCATTTGGCTCTATGATTA+TGG | - | chr2_1:67663300-67663319 | Msa0219810:three_prime_UTR | 35.0% |
| !! | TATTTCTGCTGCTGATTTCA+TGG | - | chr2_1:67663338-67663357 | Msa0219810:three_prime_UTR | 35.0% |
| TCAAACACGCGCAAATTTAA+GGG | + | chr2_1:67663503-67663522 | None:intergenic | 35.0% | |
| ATCAAACACGCGCAAATTTA+AGG | + | chr2_1:67663504-67663523 | None:intergenic | 35.0% | |
| TTCCATTACAGTTGAATCCA+GGG | + | chr2_1:67663740-67663759 | None:intergenic | 35.0% | |
| TTTCCATTACAGTTGAATCC+AGG | + | chr2_1:67663741-67663760 | None:intergenic | 35.0% | |
| TGAATCAAGTTTGGTTACTC+CGG | - | chr2_1:67663973-67663992 | Msa0219810:intron | 35.0% | |
| TCGATCACAAAGTGTATGTT+TGG | + | chr2_1:67664007-67664026 | None:intergenic | 35.0% | |
| ! | GATTCAACAGTACTGGAAAA+CGG | - | chr2_1:67664090-67664109 | Msa0219810:intron | 35.0% |
| ! | GCAACTGTAACTTTAGGTTA+AGG | - | chr2_1:67664431-67664450 | Msa0219810:intron | 35.0% |
| GAAGGGATAAATTGAATGAC+AGG | - | chr2_1:67664500-67664519 | Msa0219810:intron | 35.0% | |
| !! | GGTTAGCCTATTAAATGATG+CGG | - | chr2_1:67664660-67664679 | Msa0219810:intron | 35.0% |
| TTACTTATACAAGGGGTTTC+GGG | + | chr2_1:67664909-67664928 | None:intergenic | 35.0% | |
| CTTACTTATACAAGGGGTTT+CGG | + | chr2_1:67664910-67664929 | None:intergenic | 35.0% | |
| !! | AAAATACTCTGGAGTGGATT+TGG | - | chr2_1:67665336-67665355 | Msa0219810:intron | 35.0% |
| TCTTTCTTCTCAGCCTTTAA+AGG | + | chr2_1:67665525-67665544 | None:intergenic | 35.0% | |
| GAAGCTAGACAAAGAAAAGT+TGG | - | chr2_1:67665569-67665588 | Msa0219810:intron | 35.0% | |
| ATTCCAGGATAACCAATGAA+AGG | + | chr2_1:67665684-67665703 | None:intergenic | 35.0% | |
| GTTATCCTGGAATTTCAATG+TGG | - | chr2_1:67665691-67665710 | Msa0219810:intron | 35.0% | |
| ATCTAACACTTCATGAACCA+CGG | + | chr2_1:67665890-67665909 | None:intergenic | 35.0% | |
| ! | GGTTCATGAAGTGTTAGATT+TGG | - | chr2_1:67665891-67665910 | Msa0219810:intron | 35.0% |
| AAGGACAAAGTGAATCACTT+AGG | + | chr2_1:67666152-67666171 | None:intergenic | 35.0% | |
| GCCATAATCATAGAGCCAAA+TGG | + | chr2_1:67663304-67663323 | None:intergenic | 40.0% | |
| TCAAAGTCACCTCATATGAG+AGG | + | chr2_1:67663448-67663467 | None:intergenic | 40.0% | |
| TGGAAAGTAACCCTTCAAAG+CGG | - | chr2_1:67663755-67663774 | Msa0219810:CDS | 40.0% | |
| ! | TGTATGTTTGGTTCCACTTC+CGG | + | chr2_1:67663995-67664014 | None:intergenic | 40.0% |
| CATGGAAATGGAATACTCAC+TGG | - | chr2_1:67664068-67664087 | Msa0219810:intron | 40.0% | |
| ! | GAGTAAAAGGCGCAAATTGA+AGG | + | chr2_1:67664352-67664371 | None:intergenic | 40.0% |
| ! | ATCATATGCATCTAGCTCCA+AGG | - | chr2_1:67664459-67664478 | Msa0219810:intron | 40.0% |
| ! | AGGCTAACCTTGTCAGTTTT+GGG | + | chr2_1:67664649-67664668 | None:intergenic | 40.0% |
| ! | TAGGCTAACCTTGTCAGTTT+TGG | + | chr2_1:67664650-67664669 | None:intergenic | 40.0% |
| CTCGAACCGCATCATTTAAT+AGG | + | chr2_1:67664669-67664688 | None:intergenic | 40.0% | |
| ATTAAATGATGCGGTTCGAG+TGG | - | chr2_1:67664669-67664688 | Msa0219810:intron | 40.0% | |
| AAATGAAGCTGAGAGGCTAA+AGG | - | chr2_1:67664705-67664724 | Msa0219810:CDS | 40.0% | |
| TAGATAAAGATGTCGCCATG+TGG | + | chr2_1:67664863-67664882 | None:intergenic | 40.0% | |
| TACTTATACAAGGGGTTTCG+GGG | + | chr2_1:67664908-67664927 | None:intergenic | 40.0% | |
| !! | TAGATAAAGACGGTGTCATG+TGG | + | chr2_1:67665160-67665179 | None:intergenic | 40.0% |
| CCATATCTCAAGGTTCACAT+TGG | + | chr2_1:67665242-67665261 | None:intergenic | 40.0% | |
| CCAATGTGAACCTTGAGATA+TGG | - | chr2_1:67665239-67665258 | Msa0219810:intron | 40.0% | |
| !! | GCAGAGCTTCTAAAATACTC+TGG | - | chr2_1:67665325-67665344 | Msa0219810:intron | 40.0% |
| !! | GCTTCTAAAATACTCTGGAG+TGG | - | chr2_1:67665330-67665349 | Msa0219810:intron | 40.0% |
| ACAAAGAGCTAGTTCAGAGA+TGG | - | chr2_1:67665368-67665387 | Msa0219810:intron | 40.0% | |
| !! | GAAATAACTTGTTCCGGACT+TGG | + | chr2_1:67665408-67665427 | None:intergenic | 40.0% |
| ! | ATGCCTTTCATTGGTTATCC+TGG | - | chr2_1:67665678-67665697 | Msa0219810:intron | 40.0% |
| AACTGCCACATTGAAATTCC+AGG | + | chr2_1:67665699-67665718 | None:intergenic | 40.0% | |
| TAACCACTTTAAGCAACTGG+AGG | + | chr2_1:67665768-67665787 | None:intergenic | 40.0% | |
| TGCTAACCACTTTAAGCAAC+TGG | + | chr2_1:67665771-67665790 | None:intergenic | 40.0% | |
| TCTAACACTTCATGAACCAC+GGG | + | chr2_1:67665889-67665908 | None:intergenic | 40.0% | |
| ATGGATATGGATTCCACTGG+TGG | - | chr2_1:67663273-67663292 | Msa0219810:three_prime_UTR | 45.0% | |
| ATGATATGAGCCTGAGACTG+AGG | + | chr2_1:67663414-67663433 | None:intergenic | 45.0% | |
| ACCTCATATGAGAGGAAGGA+GGG | + | chr2_1:67663440-67663459 | None:intergenic | 45.0% | |
| AGTCACCTCATATGAGAGGA+AGG | + | chr2_1:67663444-67663463 | None:intergenic | 45.0% | |
| !! | CTTGGAAATGGATTACTCCC+TGG | - | chr2_1:67663720-67663739 | Msa0219810:CDS | 45.0% |
| CTCCCTGGATTCAACTGTAA+TGG | - | chr2_1:67663735-67663754 | Msa0219810:CDS | 45.0% | |
| AAGTTTGGTTACTCCGGAAG+TGG | - | chr2_1:67663979-67663998 | Msa0219810:intron | 45.0% | |
| CTCACTGGATTCAACAGTAC+TGG | - | chr2_1:67664083-67664102 | Msa0219810:intron | 45.0% | |
| AAGCTGAGAGGCTAAAGGAA+AGG | - | chr2_1:67664710-67664729 | Msa0219810:CDS | 45.0% | |
| AGCATCTATATTGTGCCACG+TGG | - | chr2_1:67664996-67665015 | Msa0219810:CDS | 45.0% | |
| ! | ACTTGCACATGTGCTGATCA+CGG | - | chr2_1:67665073-67665092 | Msa0219810:intron | 45.0% |
| GCACAACGTGGATAACTGAA+CGG | + | chr2_1:67665138-67665157 | None:intergenic | 45.0% | |
| GTGTGCTCAACCATATCTCA+AGG | + | chr2_1:67665252-67665271 | None:intergenic | 45.0% | |
| CAAAGAAAAGTTGGAGCAGC+AGG | - | chr2_1:67665578-67665597 | Msa0219810:intron | 45.0% | |
| ATCAGCTTGTGGTTACCAGT+TGG | + | chr2_1:67665660-67665679 | None:intergenic | 45.0% | |
| !! | CAATGAAAGGCATCAGCTTG+TGG | + | chr2_1:67665671-67665690 | None:intergenic | 45.0% |
| CACAAGCTGATGCCTTTCAT+TGG | - | chr2_1:67665669-67665688 | Msa0219810:intron | 45.0% | |
| TGTGATGTATCAACTGCAGC+AGG | + | chr2_1:67665729-67665748 | None:intergenic | 45.0% | |
| ! | TGCTGCAGTTGATACATCAC+AGG | - | chr2_1:67665728-67665747 | Msa0219810:intron | 45.0% |
| ATCCAGGTGAAAGCAGAAGC+AGG | + | chr2_1:67663384-67663403 | None:intergenic | 50.0% | |
| ACCCTCCTTCCTCTCATATG+AGG | - | chr2_1:67663436-67663455 | Msa0219810:three_prime_UTR | 50.0% | |
| CACCTCATATGAGAGGAAGG+AGG | + | chr2_1:67663441-67663460 | None:intergenic | 50.0% | |
| TGGAAAACGGCCCTTCAAAG+CGG | - | chr2_1:67664103-67664122 | Msa0219810:intron | 50.0% | |
| ! | TATGCATCTAGCTCCAAGGC+AGG | - | chr2_1:67664463-67664482 | Msa0219810:intron | 50.0% |
| ! | AGGTCGTGAGAAAGTGCGAA+GGG | - | chr2_1:67664483-67664502 | Msa0219810:intron | 50.0% |
| !!! | TCAGTTTTGGGCAGCGTATC+AGG | + | chr2_1:67664637-67664656 | None:intergenic | 50.0% |
| TACGCTGCCCAAAACTGACA+AGG | - | chr2_1:67664639-67664658 | Msa0219810:intron | 50.0% | |
| GTTCTCCATGTTGTGCCACA+TGG | - | chr2_1:67664845-67664864 | Msa0219810:intron | 50.0% | |
| ATAGGACCTATGTGCTGCAC+AGG | + | chr2_1:67664943-67664962 | None:intergenic | 50.0% | |
| TCGATAAAGACGTTGCCACG+TGG | + | chr2_1:67665014-67665033 | None:intergenic | 50.0% | |
| ! | CTTGCACATGTGCTGATCAC+GGG | - | chr2_1:67665074-67665093 | Msa0219810:intron | 50.0% |
| AGCACACATAGACCTTGCCA+CGG | - | chr2_1:67665265-67665284 | Msa0219810:intron | 50.0% | |
| ! | CTGGAGTGGATTTGGACTTG+TGG | - | chr2_1:67665344-67665363 | Msa0219810:intron | 50.0% |
| CTAGTTCAGAGATGGACCGT+GGG | - | chr2_1:67665376-67665395 | Msa0219810:intron | 50.0% | |
| TAGCTTCCTCTCCAATGCCA+TGG | - | chr2_1:67665623-67665642 | Msa0219810:intron | 50.0% | |
| TCCAATGCCATGGCTGCTAA+AGG | - | chr2_1:67665633-67665652 | Msa0219810:intron | 50.0% | |
| TCCTTTAGCAGCCATGGCAT+TGG | + | chr2_1:67665637-67665656 | None:intergenic | 50.0% | |
| AGTTGGTCCTTTAGCAGCCA+TGG | + | chr2_1:67665643-67665662 | None:intergenic | 50.0% | |
| ATGGCTGCTAAAGGACCAAC+TGG | - | chr2_1:67665642-67665661 | Msa0219810:intron | 50.0% | |
| CGACCTCCAGTTGCTTAAAG+TGG | - | chr2_1:67665762-67665781 | Msa0219810:intron | 50.0% | |
| CCAAATGGAGGAACCACCAG+TGG | + | chr2_1:67663289-67663308 | None:intergenic | 55.0% | |
| CCACTGGTGGTTCCTCCATT+TGG | - | chr2_1:67663286-67663305 | Msa0219810:three_prime_UTR | 55.0% | |
| CTCCTGCTTCTGCTTTCACC+TGG | - | chr2_1:67663379-67663398 | Msa0219810:three_prime_UTR | 55.0% | |
| CACTTTCTCACGACCTGCCT+TGG | + | chr2_1:67664479-67664498 | None:intergenic | 55.0% | |
| ! | CAGGTCGTGAGAAAGTGCGA+AGG | - | chr2_1:67664482-67664501 | Msa0219810:intron | 55.0% |
| TGTCGCCATGTGGCACAACA+TGG | + | chr2_1:67664853-67664872 | None:intergenic | 55.0% | |
| CTTGCACCTGTGCAGCACAT+AGG | - | chr2_1:67664934-67664953 | Msa0219810:intron | 55.0% | |
| AAACGATGATCTGCACGCCG+TGG | + | chr2_1:67665285-67665304 | None:intergenic | 55.0% | |
| ACGGCGTGCAGATCATCGTT+TGG | - | chr2_1:67665284-67665303 | Msa0219810:intron | 55.0% | |
| GCTAGTTCAGAGATGGACCG+TGG | - | chr2_1:67665375-67665394 | Msa0219810:intron | 55.0% | |
| ACTTGTTCCGGACTTGGCCA+CGG | + | chr2_1:67665402-67665421 | None:intergenic | 55.0% | |
| ! | TAGCAGCCATGGCATTGGAG+AGG | + | chr2_1:67665632-67665651 | None:intergenic | 55.0% |
| AAGCAACTGGAGGTCGAAGC+AGG | + | chr2_1:67665758-67665777 | None:intergenic | 55.0% | |
| ! | AGACTGAGGCTGAGGCATCC+AGG | + | chr2_1:67663400-67663419 | None:intergenic | 60.0% |
| GATGCCTCAGCCTCAGTCTC+AGG | - | chr2_1:67663401-67663420 | Msa0219810:three_prime_UTR | 60.0% | |
| TGAGCCTGAGACTGAGGCTG+AGG | + | chr2_1:67663408-67663427 | None:intergenic | 60.0% | |
| !! | CGGTGTCATGTGGCACAACG+TGG | + | chr2_1:67665150-67665169 | None:intergenic | 60.0% |
| ATGATCTGCACGCCGTGGCA+AGG | + | chr2_1:67665280-67665299 | None:intergenic | 60.0% | |
| GGTTAACCAGTTCGCACCCG+TGG | - | chr2_1:67665870-67665889 | Msa0219810:intron | 60.0% | |
| CATGAACCACGGGTGCGAAC+TGG | + | chr2_1:67665879-67665898 | None:intergenic | 60.0% | |
| CAGAGATGGACCGTGGGCCG+TGG | - | chr2_1:67665382-67665401 | Msa0219810:intron | 70.0% | |
| CCGGACTTGGCCACGGCCCA+CGG | + | chr2_1:67665395-67665414 | None:intergenic | 75.0% | |
| CCGTGGGCCGTGGCCAAGTC+CGG | - | chr2_1:67665392-67665411 | Msa0219810:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 67663273 | 67666193 | 67663273 | ID=Msa0219810;Name=Msa0219810 |
| chr2_1 | mRNA | 67663273 | 67666193 | 67663273 | ID=Msa0219810-mRNA-1;Parent=Msa0219810;Name=Msa0219810-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.66|1|1|1|1|4|414|223 |
| chr2_1 | exon | 67663273 | 67663935 | 67663273 | ID=Msa0219810-mRNA-1:exon:19132;Parent=Msa0219810-mRNA-1 |
| chr2_1 | exon | 67664698 | 67664860 | 67664698 | ID=Msa0219810-mRNA-1:exon:19131;Parent=Msa0219810-mRNA-1 |
| chr2_1 | exon | 67664945 | 67665019 | 67664945 | ID=Msa0219810-mRNA-1:exon:19130;Parent=Msa0219810-mRNA-1 |
| chr2_1 | exon | 67666009 | 67666193 | 67666009 | ID=Msa0219810-mRNA-1:exon:19129;Parent=Msa0219810-mRNA-1 |
| chr2_1 | CDS | 67666009 | 67666193 | 67666009 | ID=Msa0219810-mRNA-1:cds;Parent=Msa0219810-mRNA-1 |
| chr2_1 | CDS | 67664945 | 67665019 | 67664945 | ID=Msa0219810-mRNA-1:cds;Parent=Msa0219810-mRNA-1 |
| chr2_1 | CDS | 67664698 | 67664860 | 67664698 | ID=Msa0219810-mRNA-1:cds;Parent=Msa0219810-mRNA-1 |
| chr2_1 | CDS | 67663687 | 67663935 | 67663687 | ID=Msa0219810-mRNA-1:cds;Parent=Msa0219810-mRNA-1 |
| chr2_1 | three_prime_UTR | 67663273 | 67663686 | 67663273 | ID=Msa0219810-mRNA-1:three_prime_utr;Parent=Msa0219810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
