AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0612880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612880 MtrunA17_Chr4g0047631 93.452 168 6 1 25 187 144 311 2.38e-108 323
Msa0612880 MtrunA17_Chr4g0047691 82.143 168 25 1 25 187 147 314 6.55e-93 283
Msa0612880 MtrunA17_Chr4g0047661 70.690 174 40 4 25 187 143 316 2.95e-74 235
Msa0612880 MtrunA17_Chr4g0047641 66.860 172 47 5 25 187 145 315 4.14e-67 217
Msa0612880 MtrunA17_Chr4g0058201 54.070 172 67 5 25 187 123 291 1.71e-50 172
Msa0612880 MtrunA17_Chr6g0472311 48.889 180 75 5 25 187 136 315 3.60e-47 164
Msa0612880 MtrunA17_Chr4g0058231 50.562 178 73 5 25 187 123 300 5.63e-47 163
Msa0612880 MtrunA17_Chr4g0058191 46.821 173 79 4 25 187 120 289 7.54e-46 160
Msa0612880 MtrunA17_Chr4g0011931 34.463 177 96 5 25 187 125 295 1.31e-24 100
Msa0612880 MtrunA17_Chr4g0011921 32.948 173 102 4 25 186 125 294 2.34e-24 101
Msa0612880 MtrunA17_Chr4g0011861 32.979 188 107 6 25 198 125 307 2.82e-23 96.7
Msa0612880 MtrunA17_Chr5g0419691 35.227 176 96 7 25 187 125 295 6.67e-23 97.8
Msa0612880 MtrunA17_Chr4g0011901 33.908 174 101 5 25 187 125 295 4.40e-22 95.1
Msa0612880 MtrunA17_Chr4g0011881 34.444 180 91 8 25 187 126 295 4.49e-22 95.1
Msa0612880 MtrunA17_Chr4g0058261 34.706 170 102 3 26 186 160 329 8.00e-22 94.7
Msa0612880 MtrunA17_Chr4g0011871 32.402 179 98 7 25 187 125 296 1.76e-21 93.6
Msa0612880 MtrunA17_Chr1g0156101 30.601 183 107 3 25 187 128 310 2.48e-21 93.2
Msa0612880 MtrunA17_Chr3g0101651 32.995 197 116 5 6 186 107 303 2.59e-21 93.2
Msa0612880 MtrunA17_Chr2g0310391 29.885 174 107 5 25 187 123 292 3.64e-21 92.8
Msa0612880 MtrunA17_Chr7g0218601 29.557 203 118 7 6 187 103 301 8.27e-21 91.7
Msa0612880 MtrunA17_Chr4g0011961 29.885 174 107 5 25 187 125 294 1.61e-20 90.9
Msa0612880 MtrunA17_Chr2g0310381 29.310 174 108 5 25 187 123 292 4.53e-20 89.4
Msa0612880 MtrunA17_Chr4g0011981 31.609 174 105 4 25 187 125 295 6.63e-20 89.0
Msa0612880 MtrunA17_Chr8g0382901 31.977 172 103 6 25 187 587 753 1.68e-19 88.2
Msa0612880 MtrunA17_Chr8g0382901 28.916 166 101 4 25 187 123 274 6.63e-18 83.6
Msa0612880 MtrunA17_Chr4g0058281 32.749 171 104 5 26 186 142 311 1.69e-19 87.8
Msa0612880 MtrunA17_Chr3g0116681 28.324 173 109 4 25 187 135 302 2.37e-19 87.4
Msa0612880 MtrunA17_Chr1g0156081 28.962 183 110 3 25 187 152 334 2.42e-19 87.4
Msa0612880 MtrunA17_Chr3g0116741 32.370 173 101 4 26 187 147 314 6.01e-19 86.3
Msa0612880 MtrunA17_Chr5g0406651 31.250 176 103 5 25 187 126 296 1.18e-18 85.5
Msa0612880 MtrunA17_Chr2g0310361 30.986 142 86 4 54 187 1 138 2.31e-18 79.7
Msa0612880 MtrunA17_Chr3g0101711 29.949 197 122 6 6 186 106 302 4.56e-18 83.6
Msa0612880 MtrunA17_Chr3g0101721 33.728 169 105 3 26 187 134 302 4.75e-18 83.6
Msa0612880 MtrunA17_Chr3g0094231 30.168 179 108 6 20 187 126 298 5.49e-18 83.6
Msa0612880 MtrunA17_Chr5g0445441 34.211 152 91 4 25 171 176 323 7.76e-18 83.2
Msa0612880 MtrunA17_Chr5g0445451 34.211 152 91 3 25 171 135 282 3.49e-17 80.9
Msa0612880 MtrunA17_Chr3g0101741 35.119 168 103 4 25 187 61 227 4.77e-17 80.5
Msa0612880 MtrunA17_Chr6g0484811 28.736 174 111 6 25 187 132 303 5.28e-17 80.5
Msa0612880 MtrunA17_Chr5g0431511 29.703 202 120 6 6 187 102 301 5.47e-17 80.5
Msa0612880 MtrunA17_Chr3g0116721 32.530 166 92 6 37 187 2 162 1.08e-16 76.3
Msa0612880 MtrunA17_Chr7g0218611 30.244 205 114 8 6 187 102 300 1.60e-16 79.0
Msa0612880 MtrunA17_Chr3g0101701 29.293 198 124 5 6 187 107 304 2.33e-16 78.6
Msa0612880 MtrunA17_Chr3g0101691 29.240 171 113 4 25 187 134 304 2.65e-16 78.6
Msa0612880 MtrunA17_Chr7g0254641 27.419 186 116 5 18 186 125 308 3.41e-16 78.2
Msa0612880 MtrunA17_Chr3g0101661 29.082 196 124 4 6 186 107 302 3.43e-16 78.2
Msa0612880 MtrunA17_Chr4g0024771 33.136 169 101 5 25 186 135 298 3.69e-16 78.2
Msa0612880 MtrunA17_Chr5g0445381 33.987 153 90 4 25 171 166 313 5.48e-16 77.4
Msa0612880 MtrunA17_Chr5g0445531 30.952 168 105 4 25 186 135 297 6.17e-16 77.4
Msa0612880 MtrunA17_Chr3g0086691 28.342 187 110 7 20 188 122 302 7.81e-16 77.0
Msa0612880 MtrunA17_Chr5g0403351 29.240 171 111 4 25 186 132 301 9.46e-16 76.6
Msa0612880 MtrunA17_Chr5g0431671 33.333 153 91 4 25 171 136 283 1.17e-15 76.6
Msa0612880 MtrunA17_Chr3g0101831 29.586 169 113 4 25 187 133 301 1.22e-15 76.6
Msa0612880 MtrunA17_Chr3g0101751 28.235 170 115 3 25 187 138 307 1.40e-15 76.3
Msa0612880 MtrunA17_Chr5g0445751 29.825 171 107 6 25 187 140 305 1.86e-15 75.1
Msa0612880 MtrunA17_Chr3g0101811 30.178 169 112 4 25 187 133 301 2.44e-15 75.5
Msa0612880 MtrunA17_Chr5g0403331 29.240 171 111 4 25 186 133 302 3.67e-15 75.1
Msa0612880 MtrunA17_Chr3g0101801 28.235 170 115 3 25 187 138 307 4.08e-15 75.1
Msa0612880 MtrunA17_Chr3g0101601 34.899 149 89 4 25 165 132 280 4.77e-15 74.7
Msa0612880 MtrunA17_Chr1g0162801 25.333 225 137 5 25 218 133 357 6.05e-15 74.3
Msa0612880 MtrunA17_Chr5g0431501 26.238 202 127 6 6 187 102 301 6.26e-15 74.3
Msa0612880 MtrunA17_Chr5g0431461 26.238 202 127 6 6 187 102 301 6.26e-15 74.3
Msa0612880 MtrunA17_Chr3g0101761 28.824 170 114 3 25 187 131 300 1.43e-14 73.2
Msa0612880 MtrunA17_Chr3g0101731 26.222 225 134 6 25 218 132 355 1.96e-14 72.8
Msa0612880 MtrunA17_Chr5g0431641 32.237 152 94 4 25 171 135 282 2.43e-14 72.8
Msa0612880 MtrunA17_Chr3g0101821 28.824 170 114 3 25 187 131 300 3.52e-14 72.0
Msa0612880 MtrunA17_Chr1g0162811 32.903 155 91 5 25 171 133 282 4.11e-14 72.0
Msa0612880 MtrunA17_Chr8g0344151 28.324 173 106 6 26 184 132 300 8.02e-14 71.2
Msa0612880 MtrunA17_Chr8g0357421 29.762 168 113 3 25 187 133 300 1.05e-13 70.9
Msa0612880 MtrunA17_Chr8g0372251 30.380 158 102 3 20 172 125 279 1.25e-13 70.5
Msa0612880 MtrunA17_Chr5g0445461 30.719 153 97 4 25 172 135 283 1.32e-13 70.5
Msa0612880 MtrunA17_Chr8g0344181 28.902 173 105 6 26 184 134 302 1.46e-13 70.5
Msa0612880 MtrunA17_Chr3g0101631 35.333 150 87 6 25 165 132 280 1.63e-13 70.1
Msa0612880 MtrunA17_Chr4g0035921 29.545 176 111 6 20 183 127 301 2.14e-13 69.7
Msa0612880 MtrunA17_Chr3g0101611 27.684 177 107 5 25 187 133 302 3.05e-13 69.3
Msa0612880 MtrunA17_Chr3g0101621 34.014 147 90 3 25 165 129 274 5.52e-13 68.6
Msa0612880 MtrunA17_Chr8g0361471 27.907 172 114 6 25 187 130 300 6.45e-13 68.6
Msa0612880 MtrunA17_Chr3g0086661 32.143 140 78 5 20 143 122 260 7.41e-13 68.2
Msa0612880 MtrunA17_Chr3g0086651 32.143 140 78 5 20 143 122 260 7.62e-13 68.2
Msa0612880 MtrunA17_Chr5g0430111 30.387 181 108 7 20 187 127 302 1.26e-12 67.4
Msa0612880 MtrunA17_Chr3g0101571 27.219 169 116 3 25 187 131 298 1.88e-12 67.0
Msa0612880 MtrunA17_Chr5g0430031 28.571 175 109 7 25 187 132 302 1.93e-12 67.0
Msa0612880 MtrunA17_Chr5g0403321 29.480 173 111 6 25 186 132 304 4.76e-12 65.9
Msa0612880 MtrunA17_Chr1g0167321 30.588 170 111 4 25 187 130 299 8.50e-12 65.1
Msa0612880 MtrunA17_Chr6g0463611 27.059 170 108 5 25 186 147 308 1.49e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612880 AT3G48270.1 40.828 169 86 4 25 187 126 286 4.85e-39 142
Msa0612880 AT3G48310.1 42.604 169 83 4 25 187 127 287 2.05e-38 140
Msa0612880 AT3G48320.1 44.048 168 82 6 25 187 127 287 2.93e-38 140
Msa0612880 AT3G48300.1 42.262 168 85 5 25 187 124 284 6.38e-38 139
Msa0612880 AT3G48300.2 42.262 168 85 5 25 187 126 286 6.55e-38 139
Msa0612880 AT3G48280.1 40.000 170 87 4 25 187 125 286 4.20e-36 134
Msa0612880 AT3G48290.1 40.828 169 86 5 25 187 128 288 4.45e-36 134
Msa0612880 AT3G48290.2 40.828 169 86 5 25 187 128 288 6.56e-36 134
Msa0612880 AT1G11610.1 41.477 176 80 6 25 187 128 293 6.03e-33 126
Msa0612880 AT1G11610.2 41.477 176 80 6 25 187 128 293 6.45e-33 126
Msa0612880 AT4G13310.2 38.953 172 85 6 25 183 127 291 3.53e-32 122
Msa0612880 AT4G13310.1 38.372 172 86 6 25 183 127 291 2.99e-31 121
Msa0612880 AT4G13290.1 37.888 161 82 4 25 173 128 282 2.26e-28 113
Msa0612880 AT5G24950.1 34.104 173 98 4 25 187 127 293 2.04e-27 110
Msa0612880 AT2G30770.1 34.682 173 96 4 25 187 128 293 9.62e-27 108
Msa0612880 AT4G20240.2 36.310 168 91 5 25 182 128 289 9.68e-25 102
Msa0612880 AT5G42590.1 36.782 174 95 5 25 188 127 295 1.03e-24 103
Msa0612880 AT5G24960.2 37.572 173 92 4 25 187 128 294 3.03e-24 100
Msa0612880 AT4G20240.1 36.310 168 91 5 25 182 128 289 3.09e-24 101
Msa0612880 AT5G24960.1 37.572 173 92 4 25 187 128 294 1.18e-23 100
Msa0612880 AT2G30750.1 32.370 173 100 4 25 187 128 293 3.87e-22 95.9
Msa0612880 AT4G31500.1 29.310 174 108 4 25 187 125 294 8.99e-19 86.3
Msa0612880 AT3G26310.1 32.961 179 96 7 25 187 125 295 8.16e-18 83.2
Msa0612880 AT4G13770.1 28.934 197 107 7 8 187 115 295 2.38e-17 82.0
Msa0612880 AT1G13080.1 30.055 183 99 7 25 187 126 299 8.39e-17 80.5
Msa0612880 AT5G57260.1 29.609 179 103 8 25 187 125 296 5.86e-15 74.7
Msa0612880 AT1G13110.1 29.775 178 105 7 25 186 127 300 1.06e-14 73.9
Msa0612880 AT3G26320.1 28.856 201 116 9 6 187 104 296 1.12e-14 73.9
Msa0612880 AT5G25140.1 30.682 176 102 7 25 187 124 292 3.69e-14 72.4
Msa0612880 AT4G20235.2 35.294 102 56 3 54 145 1 102 4.08e-14 68.6
Msa0612880 AT5G25180.1 26.705 176 109 7 25 187 124 292 4.30e-13 69.3
Msa0612880 AT3G44250.1 27.933 179 105 7 25 186 123 294 9.76e-13 68.2
Msa0612880 AT5G04330.1 29.121 182 114 5 20 187 122 302 1.14e-12 68.2
Msa0612880 AT3G26300.1 27.933 179 105 7 25 187 126 296 2.09e-12 67.4
Msa0612880 AT3G26280.2 29.213 178 105 7 25 186 144 316 2.66e-11 63.9
Msa0612880 AT3G26280.1 29.213 178 105 7 25 186 127 299 2.90e-11 63.9

Find 146 sgRNAs with CRISPR-Local

Find 831 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTAATGCTTCTTTATTT+TGG 0.065778 4_2:+61420720 Msa0612880:exon
GAACTGTTCATAAACCTTTC+TGG 0.158344 4_2:-61423921 None:intergenic
ATTATATACCTTGGCTTAAA+TGG 0.175562 4_2:+61412972 Msa0612880:CDS
TCATTCATTTCTGTCATATT+TGG 0.199778 4_2:-61424168 None:intergenic
CCAAAATAAAGAAGCATTAA+AGG 0.206642 4_2:-61420720 None:intergenic
AATTGATAGAACTGCAATTA+AGG 0.209450 4_2:+61413180 Msa0612880:CDS
AAATGGTTGGGTAAGGTTAA+TGG 0.219506 4_2:+61412989 Msa0612880:CDS
GTGAATATTGGAGGCAATTA+AGG 0.247833 4_2:+61420889 Msa0612880:three_prime_UTR
TGCAATTAAGGGTTTGTTAC+TGG 0.249499 4_2:+61413192 Msa0612880:CDS
CAAGAATGGTTGTTGGAGTT+TGG 0.249931 4_2:+61421128 Msa0612880:three_prime_UTR
GATTGGTTGGGAACCGTAAA+TGG 0.252969 4_2:+61421197 Msa0612880:three_prime_UTR
GTTGGAGTTTGGAGAGTTAT+TGG 0.285827 4_2:+61412931 Msa0612880:CDS
TCCACAACTTGCCATATCTT+TGG 0.292284 4_2:-61420862 None:intergenic
AGTAATGAAAACTCATGATT+TGG 0.300419 4_2:+61420788 Msa0612880:three_prime_UTR
GATTTCCGAGGGACTAATAA+TGG 0.309806 4_2:-61423783 None:intergenic
TTGGAGTTTGGAGAGTTATT+AGG 0.321274 4_2:+61421140 Msa0612880:three_prime_UTR
TTGGAGTTTGGAGAGTTATT+GGG 0.322734 4_2:+61412932 Msa0612880:CDS
CTTCAAAAGACTAATGCTAT+TGG 0.323925 4_2:+61421359 Msa0612880:three_prime_UTR
ATTATATACCTTGGCTTGAT+TGG 0.325618 4_2:+61421180 Msa0612880:three_prime_UTR
ATTGATAGAACTGCAATTAA+GGG 0.334613 4_2:+61413181 Msa0612880:CDS
CCGGAGCTGATGTTGGAGTT+TGG 0.338053 4_2:+61412920 Msa0612880:CDS
TCATGTAACTGAAGAGGATT+TGG 0.345508 4_2:+61423701 Msa0612880:three_prime_UTR
TTCAATAGATTTCAAAGGAT+TGG 0.350910 4_2:+61423941 Msa0612880:three_prime_UTR
TTACCAAGTAGAGGAATTCT+TGG 0.352552 4_2:-61420636 None:intergenic
TTTGTATGGTTCCAAAGATA+TGG 0.366704 4_2:+61420851 Msa0612880:three_prime_UTR
CATACTTTATCTCACAAATA+TGG 0.371535 4_2:+61420696 Msa0612880:CDS
ACCTTGTTCATCAATATGAT+TGG 0.377886 4_2:+61424051 Msa0612880:three_prime_UTR
TGCAATCAAGGCTTTGATAC+TGG 0.380551 4_2:+61421400 Msa0612880:three_prime_UTR
AACAACTCAGTTAAATTTAA+CGG 0.382999 4_2:-61421029 None:intergenic
TCAATATGATTGGAAATTGC+CGG 0.389614 4_2:+61424061 Msa0612880:three_prime_UTR
GCAATTTATGCATCACGGTT+TGG 0.390624 4_2:-61423644 None:intergenic
CATATTTGTGAGATAAAGTA+TGG 0.392344 4_2:-61420695 None:intergenic
CGAGGGACTAATAATGGAAT+CGG 0.414477 4_2:-61423777 None:intergenic
ATACTTTCACTCTATTGAAA+TGG 0.419144 4_2:-61424195 None:intergenic
ATACCTTGGCTTAAATGGTT+GGG 0.419161 4_2:+61412977 Msa0612880:CDS
GACATTTCAAGAATGGTTGT+TGG 0.419530 4_2:+61421121 Msa0612880:three_prime_UTR
TGGAGTAGCAGGGAAAGATT+TGG 0.421712 4_2:+61424085 Msa0612880:three_prime_UTR
GTTGTGGATATGGTGAATAT+TGG 0.426913 4_2:+61420877 Msa0612880:three_prime_UTR
CCTCCAAGAATTCCTCTACT+TGG 0.427257 4_2:+61420633 Msa0612880:CDS
CTTGATTGCAGTTCTATCAA+TGG 0.429400 4_2:-61421387 None:intergenic
CAAAATAAAGAAGCATTAAA+GGG 0.432509 4_2:-61420719 None:intergenic
TGCAAGAGACCCTTCAAGTT+GGG 0.432574 4_2:+61423878 Msa0612880:three_prime_UTR
TATACCTTGGCTTGATTGGT+TGG 0.433887 4_2:+61421184 Msa0612880:three_prime_UTR
GGAAGAAACTTTAAGAATGA+TGG 0.434129 4_2:+61420974 Msa0612880:three_prime_UTR
TTATTAGGTACTGTATGTAT+AGG 0.434172 4_2:+61421155 Msa0612880:three_prime_UTR
CACAGGTAATAATCAATGCT+TGG 0.434796 4_2:+61423850 Msa0612880:three_prime_UTR
CTTTCATGTGAAAGAGAACT+TGG 0.437297 4_2:-61412293 None:intergenic
GATATGGCAAGTTGTGGATA+TGG 0.438105 4_2:+61420867 Msa0612880:three_prime_UTR
TGCTGTTGCAGTGAATGAAT+TGG 0.438304 4_2:+61424019 Msa0612880:three_prime_UTR
AAGAAAAGAGAAAGAAATAG+TGG 0.439676 4_2:-61420555 None:intergenic
TATACCTTGGCTTAAATGGT+TGG 0.440096 4_2:+61412976 Msa0612880:CDS
GCAGAGGAAATTACAAGTAC+TGG 0.440374 4_2:-61420750 None:intergenic
CATTGATAGAACTGCAATCA+AGG 0.443406 4_2:+61421388 Msa0612880:three_prime_UTR
ATACCTTGGCTTGATTGGTT+GGG 0.445508 4_2:+61421185 Msa0612880:three_prime_UTR
AAGGAAAGACACCAAGTTGA+TGG 0.446142 4_2:-61420662 None:intergenic
AAGGTAAGACATTTCAAGAA+TGG 0.451182 4_2:+61421114 Msa0612880:three_prime_UTR
CTCTAGAGTTTAAACCAGAA+AGG 0.453846 4_2:+61423907 Msa0612880:three_prime_UTR
CCTCTCCTTCCTGCTCCAAA+TGG 0.455402 4_2:-61423978 None:intergenic
ATGGAAGATATCAAACTAAA+CGG 0.459025 4_2:+61423807 Msa0612880:three_prime_UTR
AGAGGAATTCTTGGAGGTGA+AGG 0.459851 4_2:-61420627 None:intergenic
TTGATTGCAGTTCTATCAAT+GGG 0.465271 4_2:-61421386 None:intergenic
AAATTGCCGGATGGAGTAGC+AGG 0.465508 4_2:+61424074 Msa0612880:three_prime_UTR
TCTTTCCCTGCTACTCCATC+CGG 0.475883 4_2:-61424080 None:intergenic
TTACTAATGACATAGTATGT+AGG 0.477787 4_2:+61421060 Msa0612880:three_prime_UTR
TTGGCTTAAATGGTTGGGTA+AGG 0.480252 4_2:+61412982 Msa0612880:CDS
GGAATTCTTGGAGGTGAAGG+AGG 0.480895 4_2:-61420624 None:intergenic
CACATTAGTCGTAGATCTGT+TGG 0.481240 4_2:+61421287 Msa0612880:three_prime_UTR
CGATTCCATTATTAGTCCCT+CGG 0.487329 4_2:+61423778 Msa0612880:three_prime_UTR
AGAGGTTCTTCCCAACTTGA+AGG 0.489981 4_2:-61423888 None:intergenic
ACAGGTAATAATCAATGCTT+GGG 0.490396 4_2:+61423851 Msa0612880:three_prime_UTR
CTACCTACACAGTCTTAGAA+TGG 0.493538 4_2:+61423598 Msa0612880:three_prime_UTR
GCAGGAAGGAGAGGTTGTCC+TGG 0.494521 4_2:+61423987 Msa0612880:three_prime_UTR
GAACTTATTCCATTTGGAGC+AGG 0.505797 4_2:+61423969 Msa0612880:three_prime_UTR
TACTATGTCATTAGTAATTG+TGG 0.507214 4_2:-61421054 None:intergenic
AAGATACTAAAGAAAAGCAT+AGG 0.507251 4_2:-61412335 None:intergenic
AAAACATACCGTGAAGGAAA+AGG 0.508307 4_2:+61421095 Msa0612880:three_prime_UTR
CTTGGTAACCTCCATCAACT+TGG 0.512494 4_2:+61420651 Msa0612880:CDS
GTTCAAAAGAGCAATGCTGC+TGG 0.519871 4_2:+61413151 Msa0612880:CDS
AAGATAGTGAAGAACAACAT+AGG 0.521773 4_2:-61420531 None:intergenic
TACCTACACAGTCTTAGAAT+GGG 0.523084 4_2:+61423599 Msa0612880:three_prime_UTR
CAAAATGTCCACAAAATCAC+TGG 0.523149 4_2:-61413122 None:intergenic
ATTAGTCCCTCGGAAATCAA+TGG 0.524618 4_2:+61423788 Msa0612880:three_prime_UTR
TACTAATGACATAGTATGTA+GGG 0.524860 4_2:+61421061 Msa0612880:three_prime_UTR
TTACTAATGATATAACATGT+AGG 0.526238 4_2:+61412855 Msa0612880:CDS
AACGGCTATGACATTGAAGC+TGG 0.527947 4_2:+61423825 Msa0612880:three_prime_UTR
AACAGTTCAATAGATTTCAA+AGG 0.530471 4_2:+61423936 Msa0612880:three_prime_UTR
CTTTCTGGTTTAAACTCTAG+AGG 0.530634 4_2:-61423906 None:intergenic
CCAAACTCCAACATCAGCTC+CGG 0.533421 4_2:-61412920 None:intergenic
GTTTATAGAACAAGTAATTG+AGG 0.534859 4_2:+61421262 Msa0612880:three_prime_UTR
TACTAATGATATAACATGTA+GGG 0.537235 4_2:+61412856 Msa0612880:CDS
TTATAGGAGATTATATACCT+TGG 0.541048 4_2:+61412963 Msa0612880:intron
AGATAGTGAAGAACAACATA+GGG 0.545536 4_2:-61420530 None:intergenic
ATAACATGTAGGGTGGCTCT+AGG 0.545967 4_2:+61412866 Msa0612880:CDS
ATCTTGCAATTTATGCATCA+CGG 0.548867 4_2:-61423649 None:intergenic
CCAAGTAGAGGAATTCTTGG+AGG 0.549543 4_2:-61420633 None:intergenic
TTGCAAGAGACCCTTCAAGT+TGG 0.553219 4_2:+61423877 Msa0612880:three_prime_UTR
GAGGTTCTTCCCAACTTGAA+GGG 0.553319 4_2:-61423887 None:intergenic
CAGAACTCATGTAACTGAAG+AGG 0.554357 4_2:+61423695 Msa0612880:three_prime_UTR
GGTATTGCCGGAGCTGATGT+TGG 0.561800 4_2:+61412913 Msa0612880:CDS
GATGAGGTGAGAACTGTAGT+TGG 0.562574 4_2:+61423669 Msa0612880:three_prime_UTR
TCCAAAGATATGGCAAGTTG+TGG 0.563462 4_2:+61420861 Msa0612880:three_prime_UTR
GAGGGACTAATAATGGAATC+GGG 0.563642 4_2:-61423776 None:intergenic
ATAGTATGTAGGGTGGCACT+TGG 0.567667 4_2:+61421071 Msa0612880:three_prime_UTR
GGTTAATGGTTTCTATAGCA+AGG 0.571333 4_2:+61413003 Msa0612880:CDS
ATCAGTGGTAGTAGATCTGA+TGG 0.572806 4_2:+61413082 Msa0612880:CDS
CCATTTGGAGCAGGAAGGAG+AGG 0.573152 4_2:+61423978 Msa0612880:three_prime_UTR
ATCTTATCGTCGTGTTAGAG+AGG 0.575518 4_2:+61412757 Msa0612880:CDS
ATATCTTCCATTGATTTCCG+AGG 0.578402 4_2:-61423795 None:intergenic
AAAGTATGGAGTGTGCGGTA+AGG 0.579941 4_2:-61420681 None:intergenic
GTATAGGAGATTATATACCT+TGG 0.581226 4_2:+61421171 Msa0612880:three_prime_UTR
TCCAATCATATTGATGAACA+AGG 0.584462 4_2:-61424052 None:intergenic
GCAACAGCAAACAACACTCC+AGG 0.585942 4_2:-61424005 None:intergenic
TGAAAGAGAACTCGGCAGAA+AGG 0.586334 4_2:-61420487 None:intergenic
TGACATTGAAGCTGGAACAC+AGG 0.589604 4_2:+61423833 Msa0612880:three_prime_UTR
TTGGACATGTCTGAAACTGT+TGG 0.590528 4_2:+61424104 Msa0612880:three_prime_UTR
TATCTTCCATTGATTTCCGA+GGG 0.591643 4_2:-61423794 None:intergenic
TGTTGGAGATGTTGAAAATG+AGG 0.594494 4_2:+61421304 Msa0612880:three_prime_UTR
TTACCCAACCATTTAAGCCA+AGG 0.597186 4_2:-61412980 None:intergenic
AGATACTAAAGAAAAGCATA+GGG 0.598772 4_2:-61412334 None:intergenic
ATTTCATGTGAAAGAGAACT+CGG 0.601980 4_2:-61420495 None:intergenic
GTGGATATGGTGAATATTGG+AGG 0.604461 4_2:+61420880 Msa0612880:three_prime_UTR
AAGAGAACTCGGCAGAAAGG+TGG 0.610724 4_2:-61420484 None:intergenic
TGATGGAGGTTACCAAGTAG+AGG 0.614798 4_2:-61420645 None:intergenic
ATGTAGGACATGTTTGCCGC+AGG 0.615849 4_2:+61423567 Msa0612880:intron
GGTGGACATGGCTTAAGCTG+TGG 0.620997 4_2:-61420466 None:intergenic
ACTCGGCAGAAAGGTGGACA+TGG 0.621200 4_2:-61420478 None:intergenic
CATATTTGGTAGCTACTGCA+AGG 0.621408 4_2:-61424154 None:intergenic
CACAGTCTTAGAATGGGCAA+TGG 0.622594 4_2:+61423605 Msa0612880:three_prime_UTR
TTATTCCATTTGGAGCAGGA+AGG 0.624618 4_2:+61423973 Msa0612880:three_prime_UTR
AGTAGATCTGATGGACATGT+TGG 0.635182 4_2:+61413091 Msa0612880:CDS
ATCTGATGGACATGTTGGTG+AGG 0.638109 4_2:+61413096 Msa0612880:CDS
TAATGATATAACATGTAGGG+TGG 0.651596 4_2:+61412859 Msa0612880:CDS
CAACAGATCTACGACTAATG+TGG 0.651748 4_2:-61421286 None:intergenic
TTGGTAGCTACTGCAAGGAG+AGG 0.652018 4_2:-61424149 None:intergenic
GAAAGACACCAAGTTGATGG+AGG 0.655676 4_2:-61420659 None:intergenic
TCTGATGGACATGTTGGTGA+GGG 0.659786 4_2:+61413097 Msa0612880:CDS
GTTCCCAACCAATCAAGCCA+AGG 0.662996 4_2:-61421188 None:intergenic
GTTATTGAGGAGCACATCAG+TGG 0.666333 4_2:+61413067 Msa0612880:CDS
AATTGCCGGATGGAGTAGCA+GGG 0.672783 4_2:+61424075 Msa0612880:three_prime_UTR
ATCTTATCATCGTGTCAGAG+AGG 0.677162 4_2:+61420953 Msa0612880:three_prime_UTR
TATGATTGGAAATTGCCGGA+TGG 0.680029 4_2:+61424065 Msa0612880:three_prime_UTR
GTAGGTAGTATCAGTACCTG+CGG 0.683210 4_2:-61423583 None:intergenic
TGCCCATTCTAAGACTGTGT+AGG 0.693133 4_2:-61423601 None:intergenic
GAGATAAAGTATGGAGTGTG+CGG 0.716137 4_2:-61420686 None:intergenic
TAATGACATAGTATGTAGGG+TGG 0.720462 4_2:+61421064 Msa0612880:three_prime_UTR
GATGCATAAATTGCAAGATG+AGG 0.728974 4_2:+61423653 Msa0612880:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAAAATTATTTATGTA+TGG - chr4_2:61413416-61413435 None:intergenic 10.0%
!!! ATTTTCTTTTAGTATTTTTA+GGG - chr4_2:61415211-61415230 None:intergenic 10.0%
!!! TTTTTTTTTTGTTACATTTA+AGG + chr4_2:61418510-61418529 Msa0612880:intron 10.0%
!! TAATGTTAACAAAATAATTT+CGG - chr4_2:61418784-61418803 None:intergenic 10.0%
!! CAAATATAAATAAAAGTAAA+TGG + chr4_2:61418846-61418865 Msa0612880:intron 10.0%
!! TAAATATAAATAAAAGCAAA+TGG + chr4_2:61418893-61418912 Msa0612880:intron 10.0%
!!! AAATTAACTTTTTTTTTGAA+AGG + chr4_2:61421627-61421646 Msa0612880:intron 10.0%
!! ATAAATATTATGTTAAAAAG+TGG + chr4_2:61422938-61422957 Msa0612880:intron 10.0%
!! GTAAGTAATATATAACTAAA+GGG - chr4_2:61413237-61413256 None:intergenic 15.0%
!! AGTAAGTAATATATAACTAA+AGG - chr4_2:61413238-61413257 None:intergenic 15.0%
!!! GAATTCTTCAAATTTAATTT+AGG + chr4_2:61413712-61413731 Msa0612880:intron 15.0%
!!! TTATACATTTTTCTCATATT+TGG - chr4_2:61414563-61414582 None:intergenic 15.0%
!!! CATTTTCTTTTAGTATTTTT+AGG - chr4_2:61415212-61415231 None:intergenic 15.0%
!! ACTATAACTAATTAAAAAGT+AGG + chr4_2:61415696-61415715 Msa0612880:intron 15.0%
!!! ATAGATCATTTAAGTTTTTA+AGG + chr4_2:61415762-61415781 Msa0612880:intron 15.0%
!!! TTTTAATAATAGTACCTAAT+AGG + chr4_2:61416091-61416110 Msa0612880:intron 15.0%
!! TTGCATTTATTTATGAATAT+GGG - chr4_2:61416854-61416873 None:intergenic 15.0%
!! TTTGCATTTATTTATGAATA+TGG - chr4_2:61416855-61416874 None:intergenic 15.0%
!! TATTCATAAATAAATGCAAA+TGG + chr4_2:61416855-61416874 Msa0612880:intron 15.0%
!! ATTCATAAATAAATGCAAAT+GGG + chr4_2:61416856-61416875 Msa0612880:intron 15.0%
!!! ACTTTTGTAAAAGTTTTTTT+TGG - chr4_2:61416927-61416946 None:intergenic 15.0%
!! AACTATAAACATTATATGAT+GGG - chr4_2:61416984-61417003 None:intergenic 15.0%
!! TAACTATAAACATTATATGA+TGG - chr4_2:61416985-61417004 None:intergenic 15.0%
!!! GTATTTTTGAAATTTCAATT+GGG - chr4_2:61417489-61417508 None:intergenic 15.0%
!!! AGTATTTTTGAAATTTCAAT+TGG - chr4_2:61417490-61417509 None:intergenic 15.0%
!! AATTCATAAATAAATGGTAT+TGG + chr4_2:61417696-61417715 Msa0612880:intron 15.0%
!!! GAAATATATTTTATGTTCAA+GGG - chr4_2:61417914-61417933 None:intergenic 15.0%
!!! AGAAATATATTTTATGTTCA+AGG - chr4_2:61417915-61417934 None:intergenic 15.0%
!! TATAAAAAAAGCAATAAAGT+TGG + chr4_2:61418059-61418078 Msa0612880:intron 15.0%
!! ATAAAAAAAGCAATAAAGTT+GGG + chr4_2:61418060-61418079 Msa0612880:intron 15.0%
!!! GTATATTTGTATTTTACTTT+GGG - chr4_2:61419654-61419673 None:intergenic 15.0%
!! ATGTAACAAAAAAAAAATGA+AGG - chr4_2:61418507-61418526 None:intergenic 15.0%
!!! TTTTTTTCAATATTCTCTTT+GGG - chr4_2:61419281-61419300 None:intergenic 15.0%
!!! TTTTTTTTCAATATTCTCTT+TGG - chr4_2:61419282-61419301 None:intergenic 15.0%
!!! GTATATTTGTATTTTACTTT+GGG + chr4_2:61419654-61419673 Msa0612880:intron 15.0%
!!! ATAAATGATATACTTTTGTA+TGG + chr4_2:61420837-61420856 Msa0612880:three_prime_UTR 15.0%
!! GAAAACAAAAATTATTGAAA+GGG - chr4_2:61421917-61421936 None:intergenic 15.0%
!! TGAAAACAAAAATTATTGAA+AGG - chr4_2:61421918-61421937 None:intergenic 15.0%
!!! AATTCAAAGAAGAATTTTAT+GGG + chr4_2:61422330-61422349 Msa0612880:intron 15.0%
!! TGATTTACAAATTAATTAAC+CGG + chr4_2:61422415-61422434 Msa0612880:intron 15.0%
!! GACAGAAAAAAAAAAAAATA+GGG - chr4_2:61422828-61422847 None:intergenic 15.0%
!! AATATTAGTATATATATGCA+TGG - chr4_2:61422880-61422899 None:intergenic 15.0%
!! CCATCAAAAAAAAAAAAATA+GGG - chr4_2:61423046-61423065 None:intergenic 15.0%
!!! CCTATTTTTTTTTTTTTGAT+GGG + chr4_2:61423044-61423063 Msa0612880:intron 15.0%
!! TAAGTTGTAACTATTTATAA+AGG - chr4_2:61423151-61423170 None:intergenic 15.0%
!!! CTTTAATGCTTCTTTATTTA+GGG + chr4_2:61412525-61412544 Msa0612880:intron 20.0%
!! TTACTAATGATATAACATGT+AGG + chr4_2:61412855-61412874 Msa0612880:CDS 20.0%
!! TACTAATGATATAACATGTA+GGG + chr4_2:61412856-61412875 Msa0612880:CDS 20.0%
!! TCAATTTGAATAGTTATGTT+TGG - chr4_2:61413362-61413381 None:intergenic 20.0%
!! TTATTTGAATGAACTGATTA+TGG - chr4_2:61413458-61413477 None:intergenic 20.0%
!! AATAGTTCAATAGATTTCAA+AGG + chr4_2:61414328-61414347 Msa0612880:intron 20.0%
!! AAAAATGTATAAACAACCTA+AGG + chr4_2:61414571-61414590 Msa0612880:intron 20.0%
!! AAAATGTATAAACAACCTAA+GGG + chr4_2:61414572-61414591 Msa0612880:intron 20.0%
!! ACATATAAGTAGTATATCAA+TGG - chr4_2:61414979-61414998 None:intergenic 20.0%
!! TATACTACTTATATGTTGAA+TGG + chr4_2:61414983-61415002 Msa0612880:intron 20.0%
!! ACAAAGACTATAAATGATTA+TGG - chr4_2:61415160-61415179 None:intergenic 20.0%
!! AAAATAATTGTATGTGAACA+TGG - chr4_2:61415385-61415404 None:intergenic 20.0%
!! TTTATGTGACAACATATAAT+TGG - chr4_2:61415418-61415437 None:intergenic 20.0%
!! GAAACAAACATGAAATTTAA+AGG - chr4_2:61415740-61415759 None:intergenic 20.0%
!!! TATTTTAAGCAAAAGTAATG+TGG + chr4_2:61416228-61416247 Msa0612880:intron 20.0%
!!! ATTTTAAGCAAAAGTAATGT+GGG + chr4_2:61416229-61416248 Msa0612880:intron 20.0%
!!! TTTAAGTTTTGAGTTTGTTT+CGG - chr4_2:61416412-61416431 None:intergenic 20.0%
!! AAATTGATGAAAATTCTGTA+AGG - chr4_2:61416601-61416620 None:intergenic 20.0%
!!! TTTTTTGAGAGAAATATTTC+CGG - chr4_2:61416743-61416762 None:intergenic 20.0%
!! TCTCAAAAAAAAAAAAAGAC+CGG + chr4_2:61416753-61416772 Msa0612880:intron 20.0%
!!! GTTTTTTTAGACAATATTTC+CGG - chr4_2:61416775-61416794 None:intergenic 20.0%
!! TTATTTAATCCATAAGTCTT+CGG + chr4_2:61416801-61416820 Msa0612880:intron 20.0%
!!! TTTGTAAAAGTTTTTTTTGG+TGG - chr4_2:61416924-61416943 None:intergenic 20.0%
!! AATAAATGTGTAATTCATTG+TGG + chr4_2:61417145-61417164 Msa0612880:intron 20.0%
!! ATAAATGTGTAATTCATTGT+GGG + chr4_2:61417146-61417165 Msa0612880:intron 20.0%
!! AAGCAGAATTCATAAATAAA+TGG + chr4_2:61417690-61417709 Msa0612880:intron 20.0%
!!! ATAAATAAATGGTATTGGAT+AGG + chr4_2:61417701-61417720 Msa0612880:intron 20.0%
!! TAAAAAAAGCAATAAAGTTG+GGG + chr4_2:61418061-61418080 Msa0612880:intron 20.0%
!!! GGTATATTTGTATTTTACTT+TGG - chr4_2:61419653-61419672 None:intergenic 20.0%
!! GACTAAATTATAAAAGCAAA+TGG + chr4_2:61418868-61418887 Msa0612880:intron 20.0%
!!! TTTTTTCAATATTCTCTTTG+GGG - chr4_2:61419280-61419299 None:intergenic 20.0%
!!! GGTATATTTGTATTTTACTT+TGG + chr4_2:61419653-61419672 Msa0612880:intron 20.0%
!! ATAATAATATAGGATAGGAA+AGG - chr4_2:61419881-61419900 None:intergenic 20.0%
!! TTACTTGTGGATAATAATAT+AGG - chr4_2:61419891-61419910 None:intergenic 20.0%
!!! TACAAAATTTTACTTACTTG+TGG - chr4_2:61419904-61419923 None:intergenic 20.0%
!! AATTTACTCATGATAGAAAA+TGG - chr4_2:61419984-61420003 None:intergenic 20.0%
!!! TTATCTTGTTATAAGCATTT+AGG + chr4_2:61420334-61420353 Msa0612880:intron 20.0%
!!! TATCTTCCTCTATATAATTT+TGG - chr4_2:61420364-61420383 None:intergenic 20.0%
!!! CAAAATAAAGAAGCATTAAA+GGG - chr4_2:61420722-61420741 None:intergenic 20.0%
!!! CTTTAATGCTTCTTTATTTT+GGG + chr4_2:61420721-61420740 Msa0612880:exon 20.0%
!!! ATATCATTTATTTTACGATG+TGG - chr4_2:61420828-61420847 None:intergenic 20.0%
!! AACAACTCAGTTAAATTTAA+CGG - chr4_2:61421032-61421051 None:intergenic 20.0%
!!! TATAAACTCATCCAAATTTT+TGG - chr4_2:61421249-61421268 None:intergenic 20.0%
!! TAAAACATAAATGAAAAACC+AGG - chr4_2:61421431-61421450 None:intergenic 20.0%
!!! ATGTTTTACAGTTTATTCTT+TGG + chr4_2:61421443-61421462 Msa0612880:intron 20.0%
!! TCATAGTAAATTTGATACTT+TGG + chr4_2:61421670-61421689 Msa0612880:intron 20.0%
!! CAGATATTAATATTAGAGTT+GGG + chr4_2:61421824-61421843 Msa0612880:intron 20.0%
!! AGATATTAATATTAGAGTTG+GGG + chr4_2:61421825-61421844 Msa0612880:intron 20.0%
!! AATTATTGAAAGGGTAAAAT+TGG - chr4_2:61421908-61421927 None:intergenic 20.0%
!!! TGTTTTTAGCAAAATTATGT+GGG - chr4_2:61421942-61421961 None:intergenic 20.0%
!!! TTGTTTTTAGCAAAATTATG+TGG - chr4_2:61421943-61421962 None:intergenic 20.0%
!!! CATAATTTTGCTAAAAACAA+TGG + chr4_2:61421943-61421962 Msa0612880:intron 20.0%
!!! ACAGTATATTTTAAATCTCT+TGG - chr4_2:61422048-61422067 None:intergenic 20.0%
!!! AATTTTCCTTTCTAGTTTTT+TGG - chr4_2:61422072-61422091 None:intergenic 20.0%
!! TCGTTAACATAATATATTTC+TGG - chr4_2:61422119-61422138 None:intergenic 20.0%
!!! GAATTCAAAGAAGAATTTTA+TGG + chr4_2:61422329-61422348 Msa0612880:intron 20.0%
!!! ACGATTTTGAAATTTAAATC+GGG - chr4_2:61422636-61422655 None:intergenic 20.0%
!!! GACGATTTTGAAATTTAAAT+CGG - chr4_2:61422637-61422656 None:intergenic 20.0%
!! CGACAGAAAAAAAAAAAAAT+AGG - chr4_2:61422829-61422848 None:intergenic 20.0%
!!! AATATTTTTTCTTGCTCTTA+AGG + chr4_2:61422894-61422913 Msa0612880:intron 20.0%
!!! CCCTATTTTTTTTTTTTTGA+TGG + chr4_2:61423043-61423062 Msa0612880:intron 20.0%
!! CCCATCAAAAAAAAAAAAAT+AGG - chr4_2:61423047-61423066 None:intergenic 20.0%
!! ATAGAAAGATTGTAAATCAT+AGG - chr4_2:61423092-61423111 None:intergenic 20.0%
!! AACTATTTATAAAGGTTGTT+AGG - chr4_2:61423143-61423162 None:intergenic 20.0%
!! AGATACTAAAGAAAAGCATA+GGG - chr4_2:61412337-61412356 None:intergenic 25.0%
!! AAGATACTAAAGAAAAGCAT+AGG - chr4_2:61412338-61412357 None:intergenic 25.0%
!!! CCTAAATAAAGAAGCATTAA+AGG - chr4_2:61412527-61412546 None:intergenic 25.0%
!! CCTTTAATGCTTCTTTATTT+AGG + chr4_2:61412524-61412543 Msa0612880:intron 25.0%
! ATCTTTGATATCATGTTGTA+TGG + chr4_2:61412641-61412660 Msa0612880:intron 25.0%
! TTATTGGGTTCATTCTTTAT+AGG + chr4_2:61412947-61412966 Msa0612880:intron 25.0%
! TTATAGGAGATTATATACCT+TGG + chr4_2:61412963-61412982 Msa0612880:intron 25.0%
! ATTATATACCTTGGCTTAAA+TGG + chr4_2:61412972-61412991 Msa0612880:CDS 25.0%
!!! GTTTTTTGAGAAAGTTATTG+AGG + chr4_2:61413054-61413073 Msa0612880:CDS 25.0%
! AATTGATAGAACTGCAATTA+AGG + chr4_2:61413180-61413199 Msa0612880:CDS 25.0%
! ATTGATAGAACTGCAATTAA+GGG + chr4_2:61413181-61413200 Msa0612880:CDS 25.0%
! GAGGAACTAAAAAATTGTAT+TGG + chr4_2:61413665-61413684 Msa0612880:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr4_2:61413668-61413687 Msa0612880:intron 25.0%
! TAAAAAATTGTATTGGAGGA+TGG + chr4_2:61413672-61413691 Msa0612880:intron 25.0%
! ATGGAAGATATCAAACTAAA+CGG + chr4_2:61414199-61414218 Msa0612880:intron 25.0%
!! GATTTTGAACTTATTCCATT+TGG + chr4_2:61414355-61414374 Msa0612880:intron 25.0%
!! ATGATATTAGACCTTTGAAA+GGG - chr4_2:61414625-61414644 None:intergenic 25.0%
! AATGATATTAGACCTTTGAA+AGG - chr4_2:61414626-61414645 None:intergenic 25.0%
! CATGGAATTTGATTATTCAA+AGG - chr4_2:61414674-61414693 None:intergenic 25.0%
! AAAGGAATATGAGTATTCAA+AGG - chr4_2:61414762-61414781 None:intergenic 25.0%
!! CATATTCCTTTTATTACTCT+TGG + chr4_2:61414771-61414790 Msa0612880:intron 25.0%
! ATAAGTAGTATATCAATGGT+AGG - chr4_2:61414975-61414994 None:intergenic 25.0%
!!! AACAGGAGTATTTTGTTTTA+AGG + chr4_2:61415045-61415064 Msa0612880:intron 25.0%
! AGGGATAAAAAAAATACTTG+CGG - chr4_2:61415192-61415211 None:intergenic 25.0%
!!! AAAAGTGCAATTGTTTTTGT+TGG + chr4_2:61415243-61415262 Msa0612880:intron 25.0%
!! GTTTTTGTTGGAACTAAAAA+TGG + chr4_2:61415255-61415274 Msa0612880:intron 25.0%
!!! AAGTTTTTAAGGTTTCAGAT+AGG + chr4_2:61415773-61415792 Msa0612880:intron 25.0%
!!! GGTTTTTTAATGTTATTGGT+GGG - chr4_2:61416165-61416184 None:intergenic 25.0%
!!! TGGTTTTTTAATGTTATTGG+TGG - chr4_2:61416166-61416185 None:intergenic 25.0%
!!! CCTTGGTTTTTTAATGTTAT+TGG - chr4_2:61416169-61416188 None:intergenic 25.0%
! CCAATAACATTAAAAAACCA+AGG + chr4_2:61416166-61416185 Msa0612880:intron 25.0%
!! TTTTCAATTGCAATTTACCT+TGG - chr4_2:61416186-61416205 None:intergenic 25.0%
! GAAACAAACTCAAAACTTAA+AGG + chr4_2:61416411-61416430 Msa0612880:intron 25.0%
!! ATAGGTCATTTAAGTTTCTA+AGG - chr4_2:61416449-61416468 None:intergenic 25.0%
!!! CACTTTGTATGATACTTTTT+AGG - chr4_2:61416515-61416534 None:intergenic 25.0%
! TAGTAAAAGAACACTAAAGA+TGG + chr4_2:61416658-61416677 Msa0612880:intron 25.0%
!! AAACTAAGCTTTATAAAGAC+CGG + chr4_2:61416721-61416740 Msa0612880:intron 25.0%
! TTGTCCATTATATAACACAT+AGG - chr4_2:61417081-61417100 None:intergenic 25.0%
!!! TGTTATATAATGGACAATTG+AGG + chr4_2:61417084-61417103 Msa0612880:intron 25.0%
! TGGAGGAATATAAAGATAAA+GGG + chr4_2:61417365-61417384 Msa0612880:intron 25.0%
!! AGAAAGTGAAATGATTGTTT+TGG + chr4_2:61417814-61417833 Msa0612880:intron 25.0%
!! GAAAGTGAAATGATTGTTTT+GGG + chr4_2:61417815-61417834 Msa0612880:intron 25.0%
! AAAGTGGAATAGAAAGTTAA+AGG + chr4_2:61417853-61417872 Msa0612880:intron 25.0%
!! TTCCTTTTCACATAAATCAT+GGG - chr4_2:61417969-61417988 None:intergenic 25.0%
!! TTTCCTTTTCACATAAATCA+TGG - chr4_2:61417970-61417989 None:intergenic 25.0%
! TGTAAAACACAATAAAACCA+TGG - chr4_2:61418413-61418432 None:intergenic 25.0%
!! GCACTAAACAATTTTCAATT+AGG + chr4_2:61418481-61418500 Msa0612880:intron 25.0%
!!! TCTACTTATTTTCTCCTTTT+TGG + chr4_2:61419016-61419035 Msa0612880:intron 25.0%
!!! CTACTTATTTTCTCCTTTTT+GGG + chr4_2:61419017-61419036 Msa0612880:intron 25.0%
!!! TACTTATTTTCTCCTTTTTG+GGG + chr4_2:61419018-61419037 Msa0612880:intron 25.0%
! TAAAAAGTAATCAATCTTCG+TGG + chr4_2:61419041-61419060 Msa0612880:intron 25.0%
! AAAAAGTAATCAATCTTCGT+GGG + chr4_2:61419042-61419061 Msa0612880:intron 25.0%
!! CAGATTTAAAATTATCCCAA+CGG + chr4_2:61419193-61419212 Msa0612880:intron 25.0%
! AAAGAAAGAAGAGAATTAGA+GGG + chr4_2:61419304-61419323 Msa0612880:intron 25.0%
! ATTTATGTTAGATACAACCT+AGG - chr4_2:61419399-61419418 None:intergenic 25.0%
! TGTGGATAATAATATAGGAT+AGG - chr4_2:61419886-61419905 None:intergenic 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr4_2:61420247-61420266 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - chr4_2:61420260-61420279 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + chr4_2:61420259-61420278 Msa0612880:intron 25.0%
! TATATAGGAAAGGAATAAAG+TGG + chr4_2:61420423-61420442 Msa0612880:intron 25.0%
! AAGAAAAGAGAAAGAAATAG+TGG - chr4_2:61420558-61420577 None:intergenic 25.0%
! CATATTTGTGAGATAAAGTA+TGG - chr4_2:61420698-61420717 None:intergenic 25.0%
! CATACTTTATCTCACAAATA+TGG + chr4_2:61420696-61420715 Msa0612880:CDS 25.0%
!!! CCAAAATAAAGAAGCATTAA+AGG - chr4_2:61420723-61420742 None:intergenic 25.0%
!!! CCTTTAATGCTTCTTTATTT+TGG + chr4_2:61412524-61412543 Msa0612880:intron 25.0%
! AGTAATGAAAACTCATGATT+TGG + chr4_2:61420788-61420807 Msa0612880:three_prime_UTR 25.0%
! TACTATGTCATTAGTAATTG+TGG - chr4_2:61421057-61421076 None:intergenic 25.0%
! TTACTAATGACATAGTATGT+AGG + chr4_2:61421060-61421079 Msa0612880:three_prime_UTR 25.0%
! TACTAATGACATAGTATGTA+GGG + chr4_2:61421061-61421080 Msa0612880:three_prime_UTR 25.0%
!! TTATTAGGTACTGTATGTAT+AGG + chr4_2:61421155-61421174 Msa0612880:three_prime_UTR 25.0%
! ACAAAAATGTGCCAAAAATT+TGG + chr4_2:61421235-61421254 Msa0612880:three_prime_UTR 25.0%
! GTTTATAGAACAAGTAATTG+AGG + chr4_2:61421262-61421281 Msa0612880:three_prime_UTR 25.0%
! ATATTTATTGCTCTAGCATA+TGG + chr4_2:61421505-61421524 Msa0612880:intron 25.0%
!! TTTTCAGATCATATCATCAT+AGG - chr4_2:61421698-61421717 None:intergenic 25.0%
! AGAAAATAAGTTTCAATTGC+AGG + chr4_2:61421727-61421746 Msa0612880:intron 25.0%
! GCAGATATTAATATTAGAGT+TGG + chr4_2:61421823-61421842 Msa0612880:intron 25.0%
!! AGATTAAATGTAAGGGTATA+GGG - chr4_2:61421859-61421878 None:intergenic 25.0%
!! AAGATTAAATGTAAGGGTAT+AGG - chr4_2:61421860-61421879 None:intergenic 25.0%
! GGGTAAAAGATTAAATGTAA+GGG - chr4_2:61421866-61421885 None:intergenic 25.0%
!!! GTTTTTAGCAAAATTATGTG+GGG - chr4_2:61421941-61421960 None:intergenic 25.0%
! ATTGTTTATGAAGATGAATC+CGG - chr4_2:61421972-61421991 None:intergenic 25.0%
! TTGAAGAGAGTTAATCAAAA+TGG - chr4_2:61422371-61422390 None:intergenic 25.0%
!!! CAATTTTAGGAATACATCAA+AGG - chr4_2:61422445-61422464 None:intergenic 25.0%
! CTTTGATGTATTCCTAAAAT+TGG + chr4_2:61422443-61422462 Msa0612880:intron 25.0%
! GTATTCCTAAAATTGGAAAT+TGG + chr4_2:61422450-61422469 Msa0612880:intron 25.0%
!! ATTCTCCAATTTCCAATTTT+AGG - chr4_2:61422458-61422477 None:intergenic 25.0%
!! TGGCATTTTCAATTAATTGT+AGG + chr4_2:61422544-61422563 Msa0612880:intron 25.0%
!! GGCATTTTCAATTAATTGTA+GGG + chr4_2:61422545-61422564 Msa0612880:intron 25.0%
!! GCATTTTCAATTAATTGTAG+GGG + chr4_2:61422546-61422565 Msa0612880:intron 25.0%
!!! AGGGTATTTTTGTAGAAAAT+GGG - chr4_2:61422809-61422828 None:intergenic 25.0%
!!! TAGGGTATTTTTGTAGAAAA+TGG - chr4_2:61422810-61422829 None:intergenic 25.0%
! GGTGATACTAGAATTAATAA+GGG - chr4_2:61422859-61422878 None:intergenic 25.0%
! TGGTGATACTAGAATTAATA+AGG - chr4_2:61422860-61422879 None:intergenic 25.0%
! TTGTTAAGGAAACTGAAAAT+AGG - chr4_2:61423014-61423033 None:intergenic 25.0%
!!! TTTTGCTTTGGCTTTAAATA+GGG - chr4_2:61423272-61423291 None:intergenic 25.0%
!!! TAAGATTTGTTAGCTTAGTT+AGG + chr4_2:61423425-61423444 Msa0612880:intron 25.0%
! AATTCCAAATGATCAATCTT+TGG + chr4_2:61423503-61423522 Msa0612880:intron 25.0%
! ATGGAAGATATCAAACTAAA+CGG + chr4_2:61414199-61414218 Msa0612880:intron 25.0%
! AACAGTTCAATAGATTTCAA+AGG + chr4_2:61423936-61423955 Msa0612880:three_prime_UTR 25.0%
! TTCAATAGATTTCAAAGGAT+TGG + chr4_2:61414333-61414352 Msa0612880:intron 25.0%
!! GATTTTGAACTTATTCCATT+TGG + chr4_2:61414355-61414374 Msa0612880:intron 25.0%
! TCATTCATTTCTGTCATATT+TGG - chr4_2:61424171-61424190 None:intergenic 25.0%
! ATACTTTCACTCTATTGAAA+TGG - chr4_2:61424198-61424217 None:intergenic 25.0%
TTACCAAGTAAAGGAAATCT+TGG - chr4_2:61412443-61412462 None:intergenic 30.0%
CATATTTGTGAGCTAAATCT+TGG - chr4_2:61412502-61412521 None:intergenic 30.0%
! CAAGATTTAGCTCACAAATA+TGG + chr4_2:61412500-61412519 Msa0612880:intron 30.0%
! AATGCTTCTTTATTTAGGGA+AGG + chr4_2:61412529-61412548 Msa0612880:intron 30.0%
! ATATCAAAGATTTTACGCTG+TGG - chr4_2:61412632-61412651 None:intergenic 30.0%
!! TACACCTTTTGAGTAACAAA+AGG + chr4_2:61412729-61412748 Msa0612880:CDS 30.0%
!! ACACCTTTTGAGTAACAAAA+GGG + chr4_2:61412730-61412749 Msa0612880:CDS 30.0%
TAATGATATAACATGTAGGG+TGG + chr4_2:61412859-61412878 Msa0612880:CDS 30.0%
GGAAAAAGATATGGTGAAAA+AGG + chr4_2:61412887-61412906 Msa0612880:CDS 30.0%
AAAAGATATGGTGAAAAAGG+TGG + chr4_2:61412890-61412909 Msa0612880:CDS 30.0%
AAAGATATGGTGAAAAAGGT+GGG + chr4_2:61412891-61412910 Msa0612880:CDS 30.0%
ATTTATTATTCAGCTCACGT+AGG + chr4_2:61413383-61413402 Msa0612880:intron 30.0%
TGGAAGAAATAGAGGAAAAT+GGG + chr4_2:61413586-61413605 Msa0612880:intron 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG - chr4_2:61413659-61413678 None:intergenic 30.0%
AAACCATACTAAATTCCCTA+TGG - chr4_2:61413904-61413923 None:intergenic 30.0%
ATAGGGAATTTAGTATGGTT+TGG + chr4_2:61413903-61413922 Msa0612880:intron 30.0%
TCATGTAACTGAAGAAGATT+TGG + chr4_2:61414093-61414112 Msa0612880:intron 30.0%
ACAGGTAATAATCAATGCTT+GGG + chr4_2:61414243-61414262 Msa0612880:intron 30.0%
GAACTATTCATAAACCTTTC+TGG - chr4_2:61414316-61414335 None:intergenic 30.0%
! ACCTTGTTTACCAATTTGAT+TGG + chr4_2:61414443-61414462 Msa0612880:intron 30.0%
TCCAATCAAATTGGTAAACA+AGG - chr4_2:61414447-61414466 None:intergenic 30.0%
GAACTAACAGAATGAAAACA+TGG - chr4_2:61414692-61414711 None:intergenic 30.0%
!! TTTCATTCTGTTAGTTCTGT+TGG + chr4_2:61414695-61414714 Msa0612880:intron 30.0%
CTAGTATCCATATTGGAATT+TGG - chr4_2:61414735-61414754 None:intergenic 30.0%
AGGAAAACTAGTATCCATAT+TGG - chr4_2:61414742-61414761 None:intergenic 30.0%
AGATCACCAAGAGTAATAAA+AGG - chr4_2:61414780-61414799 None:intergenic 30.0%
AGTAGTGATAGTTTCACATA+AGG + chr4_2:61414900-61414919 Msa0612880:intron 30.0%
! CCAATTAATTTTCCCATGAA+GGG + chr4_2:61414938-61414957 Msa0612880:intron 30.0%
!!! TTTTAGGACTGAAACATAAC+AGG + chr4_2:61415028-61415047 Msa0612880:intron 30.0%
CTCACATTCATTAATTGATG+TGG + chr4_2:61415464-61415483 Msa0612880:intron 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG + chr4_2:61415791-61415810 Msa0612880:intron 30.0%
CTGAAACCTTAGAAACTTAA+AGG - chr4_2:61416440-61416459 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG + chr4_2:61415802-61415821 Msa0612880:intron 30.0%
GATACAAACTCGAAACTTAA+AGG - chr4_2:61415829-61415848 None:intergenic 30.0%
! ACAGATCAACTTTGACTTAA+CGG - chr4_2:61415875-61415894 None:intergenic 30.0%
CTTAACGAACATAACAACTT+TGG + chr4_2:61415988-61416007 Msa0612880:intron 30.0%
! ATTTAAGACCTCAAAGTTGA+GGG - chr4_2:61416037-61416056 None:intergenic 30.0%
!! TCAACTTTGAGGTCTTAAAT+GGG + chr4_2:61416037-61416056 Msa0612880:intron 30.0%
AAAAAGTGATGTGTCAATGT+GGG - chr4_2:61416064-61416083 None:intergenic 30.0%
AAAAAAGTGATGTGTCAATG+TGG - chr4_2:61416065-61416084 None:intergenic 30.0%
!!! ATTGTGGAGAAATTTTTTGG+GGG - chr4_2:61416303-61416322 None:intergenic 30.0%
!!! CATTGTGGAGAAATTTTTTG+GGG - chr4_2:61416304-61416323 None:intergenic 30.0%
!!! CCATTGTGGAGAAATTTTTT+GGG - chr4_2:61416305-61416324 None:intergenic 30.0%
!!! ACCATTGTGGAGAAATTTTT+TGG - chr4_2:61416306-61416325 None:intergenic 30.0%
AAAAAATTTCTCCACAATGG+TGG + chr4_2:61416305-61416324 Msa0612880:intron 30.0%
! TTTAAGATCCGGTACTTAAT+AGG - chr4_2:61416333-61416352 None:intergenic 30.0%
! GGTCTTAACTATTTAAGATC+CGG - chr4_2:61416344-61416363 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - chr4_2:61415802-61415821 None:intergenic 30.0%
ATTTCTTCAAGCCAAATCTT+AGG + chr4_2:61417010-61417029 Msa0612880:intron 30.0%
TTTCTTCAAGCCAAATCTTA+GGG + chr4_2:61417011-61417030 Msa0612880:intron 30.0%
GTGGAGGAATATAAAGATAA+AGG + chr4_2:61417364-61417383 Msa0612880:intron 30.0%
GGAGGAATATAAAGATAAAG+GGG + chr4_2:61417366-61417385 Msa0612880:intron 30.0%
GAATATAAAGATAAAGGGGA+AGG + chr4_2:61417370-61417389 Msa0612880:intron 30.0%
GCATTATAGTCATTTCAGTT+GGG + chr4_2:61417643-61417662 Msa0612880:intron 30.0%
CCAAACAAAGCATAAAGATT+TGG - chr4_2:61417730-61417749 None:intergenic 30.0%
! CCAAATCTTTATGCTTTGTT+TGG + chr4_2:61417727-61417746 Msa0612880:intron 30.0%
!! ATGCTTTGTTTGGTTATGAA+AGG + chr4_2:61417737-61417756 Msa0612880:intron 30.0%
GGTTATGAAAGGAAACTTAA+AGG + chr4_2:61417748-61417767 Msa0612880:intron 30.0%
CTTAAAGGAAAGAAAGAGAA+AGG + chr4_2:61417763-61417782 Msa0612880:intron 30.0%
GAGAAAGGAAAGATTGTATA+AGG + chr4_2:61417778-61417797 Msa0612880:intron 30.0%
!!! AAATGATTGTTTTGGGTGTT+TGG + chr4_2:61417822-61417841 Msa0612880:intron 30.0%
TTTATGTGAAAAGGAAAGTG+AGG + chr4_2:61417973-61417992 Msa0612880:intron 30.0%
CTAATGTGACTATAGTGAAT+TGG + chr4_2:61417996-61418015 Msa0612880:intron 30.0%
!! TGGACTTTTCAAGCAAAATA+AGG + chr4_2:61418096-61418115 Msa0612880:intron 30.0%
GATGAAAATGAGACAAAATG+AGG - chr4_2:61418300-61418319 None:intergenic 30.0%
!!! GATTACTTTTTACCCCAAAA+AGG - chr4_2:61419033-61419052 None:intergenic 30.0%
AAAAGTAATCAATCTTCGTG+GGG + chr4_2:61419043-61419062 Msa0612880:intron 30.0%
AAAATACATCATCAACCCTT+GGG + chr4_2:61419092-61419111 Msa0612880:intron 30.0%
CAGATTTAAATTTAGCCCAA+GGG - chr4_2:61419110-61419129 None:intergenic 30.0%
AAAAAGGGATCAAAATTCGT+CGG - chr4_2:61419256-61419275 None:intergenic 30.0%
!! TATTCTCTTTGGGGTAAAAA+GGG - chr4_2:61419271-61419290 None:intergenic 30.0%
!! ATATTCTCTTTGGGGTAAAA+AGG - chr4_2:61419272-61419291 None:intergenic 30.0%
CAAAGAAAGAAGAGAATTAG+AGG + chr4_2:61419303-61419322 Msa0612880:intron 30.0%
!! AAGTATGTGAGGGTATTTAT+AGG + chr4_2:61419361-61419380 Msa0612880:intron 30.0%
GTAAAAAAAACGTGTGAAAG+TGG + chr4_2:61419422-61419441 Msa0612880:intron 30.0%
! AACAAACGTTTTTCCAACTT+TGG - chr4_2:61419483-61419502 None:intergenic 30.0%
TAAAGAGCAGGATTCAAATA+AGG + chr4_2:61419697-61419716 Msa0612880:intron 30.0%
AAGGAAACAAAGAATTGAGT+AGG - chr4_2:61419775-61419794 None:intergenic 30.0%
!!! AACCACTTTTTGACAACTTT+TGG + chr4_2:61420162-61420181 Msa0612880:intron 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr4_2:61420234-61420253 None:intergenic 30.0%
GGATCACCAAAATTATATAG+AGG + chr4_2:61420355-61420374 Msa0612880:intron 30.0%
!! ACTTGGTGGTAAGATTTTAA+TGG - chr4_2:61420397-61420416 None:intergenic 30.0%
TTTCCTATATACATCTCACT+TGG - chr4_2:61420414-61420433 None:intergenic 30.0%
AAGTGAGATGTATATAGGAA+AGG + chr4_2:61420413-61420432 Msa0612880:intron 30.0%
ATTTCATGTGAAAGAGAACT+CGG - chr4_2:61420498-61420517 None:intergenic 30.0%
AGATAGTGAAGAACAACATA+GGG - chr4_2:61420533-61420552 None:intergenic 30.0%
AAGATAGTGAAGAACAACAT+AGG - chr4_2:61420534-61420553 None:intergenic 30.0%
! CTCTTTTCTTCATCATCAAA+TGG + chr4_2:61420568-61420587 Msa0612880:CDS 30.0%
!!! AATGCTTCTTTATTTTGGGA+AGG + chr4_2:61420725-61420744 Msa0612880:exon 30.0%
TTTGTATGGTTCCAAAGATA+TGG + chr4_2:61420851-61420870 Msa0612880:three_prime_UTR 30.0%
! GGAAGAAACTTTAAGAATGA+TGG + chr4_2:61420974-61420993 Msa0612880:three_prime_UTR 30.0%
AAGGTAAGACATTTCAAGAA+TGG + chr4_2:61421114-61421133 Msa0612880:three_prime_UTR 30.0%
GTATAGGAGATTATATACCT+TGG + chr4_2:61421171-61421190 Msa0612880:three_prime_UTR 30.0%
! ATTATATACCTTGGCTTGAT+TGG + chr4_2:61421180-61421199 Msa0612880:three_prime_UTR 30.0%
CCTGCTATAAAAACCATTTA+CGG - chr4_2:61421213-61421232 None:intergenic 30.0%
! CGTAAATGGTTTTTATAGCA+GGG + chr4_2:61421211-61421230 Msa0612880:three_prime_UTR 30.0%
CTTCAAAAGACTAATGCTAT+TGG + chr4_2:61421359-61421378 Msa0612880:three_prime_UTR 30.0%
TTGATTGCAGTTCTATCAAT+GGG - chr4_2:61421389-61421408 None:intergenic 30.0%
TTACAGTTTATTCTTTGGCT+AGG + chr4_2:61421448-61421467 Msa0612880:intron 30.0%
GAGAAATAGGTGTAAACAAA+GGG - chr4_2:61421552-61421571 None:intergenic 30.0%
! CTTTGTTTACACCTATTTCT+CGG + chr4_2:61421551-61421570 Msa0612880:intron 30.0%
! TTTGTTTACACCTATTTCTC+GGG + chr4_2:61421552-61421571 Msa0612880:intron 30.0%
GGGGTAAAAGATTAAATGTA+AGG - chr4_2:61421867-61421886 None:intergenic 30.0%
TTGCTAAAAACAATGGTTTC+CGG + chr4_2:61421950-61421969 Msa0612880:intron 30.0%
ACTGTTCCAAAAAACTAGAA+AGG + chr4_2:61422063-61422082 Msa0612880:intron 30.0%
ACTCATCAAATACAACACAA+TGG - chr4_2:61422290-61422309 None:intergenic 30.0%
TCAATTAATTGTAGGGGTAA+AGG + chr4_2:61422552-61422571 Msa0612880:intron 30.0%
AAGGTATAATTTCCTAGAGT+TGG + chr4_2:61422592-61422611 Msa0612880:intron 30.0%
ATAACTGTATAACCAACTCT+AGG - chr4_2:61422607-61422626 None:intergenic 30.0%
ATTCTATGCACGATATGAAT+TGG - chr4_2:61422685-61422704 None:intergenic 30.0%
! TAGGGTCATGTTATTTGTTA+AGG - chr4_2:61423028-61423047 None:intergenic 30.0%
!!! CTTTTGCTTTGGCTTTAAAT+AGG - chr4_2:61423273-61423292 None:intergenic 30.0%
! ATTCTCCTTAGTGCAAATTT+TGG - chr4_2:61423314-61423333 None:intergenic 30.0%
AGTCAATACTAACTAACTTG+TGG - chr4_2:61423395-61423414 None:intergenic 30.0%
!! AGTTAGTATTGACTACAAGT+TGG + chr4_2:61423401-61423420 Msa0612880:intron 30.0%
TCTTCCAAAGATTGATCATT+TGG - chr4_2:61423510-61423529 None:intergenic 30.0%
ATCTTGCAATTTATGCATCA+CGG - chr4_2:61414044-61414063 None:intergenic 30.0%
ACAGGTAATAATCAATGCTT+GGG + chr4_2:61414243-61414262 Msa0612880:intron 30.0%
ACCTTGTTCATCAATATGAT+TGG + chr4_2:61424051-61424070 Msa0612880:three_prime_UTR 30.0%
TCCAATCATATTGATGAACA+AGG - chr4_2:61424055-61424074 None:intergenic 30.0%
TCAATATGATTGGAAATTGC+CGG + chr4_2:61424061-61424080 Msa0612880:three_prime_UTR 30.0%
! GATATTTTCTATGACATGCA+AGG - chr4_2:61424130-61424149 None:intergenic 30.0%
CTTTCATGTGAAAGAGAACT+TGG - chr4_2:61412296-61412315 None:intergenic 35.0%
AACAGAAGAGAAAGTAAGAG+TGG - chr4_2:61412362-61412381 None:intergenic 35.0%
CTCTTCTGTTCATCATCAAA+TGG + chr4_2:61412372-61412391 Msa0612880:intron 35.0%
!!! TGAAGGTGGTAAGTGTTTTT+TGG - chr4_2:61412417-61412436 None:intergenic 35.0%
TGATGGAGATTACCAAGTAA+AGG - chr4_2:61412452-61412471 None:intergenic 35.0%
ATGACTTGATCTTCTCTGAT+AGG + chr4_2:61412606-61412625 Msa0612880:intron 35.0%
! GAACCCTTTTGTTACTCAAA+AGG - chr4_2:61412736-61412755 None:intergenic 35.0%
AAGATATGGTGAAAAAGGTG+GGG + chr4_2:61412892-61412911 Msa0612880:CDS 35.0%
TTGGAGTTTGGAGAGTTATT+GGG + chr4_2:61412932-61412951 Msa0612880:CDS 35.0%
TATACCTTGGCTTAAATGGT+TGG + chr4_2:61412976-61412995 Msa0612880:CDS 35.0%
ATACCTTGGCTTAAATGGTT+GGG + chr4_2:61412977-61412996 Msa0612880:CDS 35.0%
AAATGGTTGGGTAAGGTTAA+TGG + chr4_2:61412989-61413008 Msa0612880:CDS 35.0%
GGTTAATGGTTTCTATAGCA+AGG + chr4_2:61413003-61413022 Msa0612880:CDS 35.0%
AGAAAAAGTGGCTACACATT+TGG + chr4_2:61413027-61413046 Msa0612880:CDS 35.0%
CAAAATGTCCACAAAATCAC+TGG - chr4_2:61413125-61413144 None:intergenic 35.0%
!! TGCAATTAAGGGTTTGTTAC+TGG + chr4_2:61413192-61413211 Msa0612880:CDS 35.0%
GCAAACAAAGCCTATATCTT+AGG - chr4_2:61413515-61413534 None:intergenic 35.0%
GTGGAAGAAATAGAGGAAAA+TGG + chr4_2:61413585-61413604 Msa0612880:intron 35.0%
TATACAAAACCCTCCTCATT+TGG + chr4_2:61413643-61413662 Msa0612880:intron 35.0%
! ATTGTATTGGAGGATGGTTT+TGG + chr4_2:61413678-61413697 Msa0612880:intron 35.0%
! TTGTATTGGAGGATGGTTTT+GGG + chr4_2:61413679-61413698 Msa0612880:intron 35.0%
AAGCCATAGGGAATTTAGTA+TGG + chr4_2:61413898-61413917 Msa0612880:intron 35.0%
!! AGTATGGTTTGGTAACTACA+TGG + chr4_2:61413914-61413933 Msa0612880:intron 35.0%
TAAAACTGTACTTTCTCTGC+AGG + chr4_2:61413943-61413962 Msa0612880:intron 35.0%
!! TACCTACACAGTTCTAGAAT+GGG + chr4_2:61413991-61414010 Msa0612880:intron 35.0%
GCAATTTATGCATCACAGTT+TGG - chr4_2:61414039-61414058 None:intergenic 35.0%
GATGCATAAATTGCAAGATG+AGG + chr4_2:61414045-61414064 Msa0612880:intron 35.0%
!! TATCTTCCATTGATTTCCGA+GGG - chr4_2:61414189-61414208 None:intergenic 35.0%
!! ATATCTTCCATTGATTTCCG+AGG - chr4_2:61414190-61414209 None:intergenic 35.0%
CACAGGTAATAATCAATGCT+TGG + chr4_2:61414242-61414261 Msa0612880:intron 35.0%
!! CTTTCTGGTTTAAACTCTAG+AGG - chr4_2:61414301-61414320 None:intergenic 35.0%
!! CTCTAGAGTTTAAACCAGAA+AGG + chr4_2:61414299-61414318 Msa0612880:intron 35.0%
TGCTATTGCTGTGAATGAAT+TGG + chr4_2:61414411-61414430 Msa0612880:intron 35.0%
CAGGCAATTTCCAATCAAAT+TGG - chr4_2:61414456-61414475 None:intergenic 35.0%
TTTGATTGGAAATTGCCTGA+TGG + chr4_2:61414457-61414476 Msa0612880:intron 35.0%
GCATATGACTTATTTCCCTT+AGG - chr4_2:61414590-61414609 None:intergenic 35.0%
AAGGGAAATAAGTCATATGC+AGG + chr4_2:61414590-61414609 Msa0612880:intron 35.0%
AGTTCTGTTGGAACAATGTT+AGG + chr4_2:61414707-61414726 Msa0612880:intron 35.0%
TTAGGCTCCAAATTCCAATA+TGG + chr4_2:61414725-61414744 Msa0612880:intron 35.0%
! AGGAGCTTAAAGTATCCAAA+GGG - chr4_2:61414823-61414842 None:intergenic 35.0%
! AAGGAGCTTAAAGTATCCAA+AGG - chr4_2:61414824-61414843 None:intergenic 35.0%
! GCCAATTAATTTTCCCATGA+AGG + chr4_2:61414937-61414956 Msa0612880:intron 35.0%
CCCTTCATGGGAAAATTAAT+TGG - chr4_2:61414941-61414960 None:intergenic 35.0%
GATTAGACATTTCCCTTCAT+GGG - chr4_2:61414953-61414972 None:intergenic 35.0%
TGTTGAATGGCTTAGATCTA+AGG + chr4_2:61414996-61415015 Msa0612880:intron 35.0%
GTTGAATGGCTTAGATCTAA+GGG + chr4_2:61414997-61415016 Msa0612880:intron 35.0%
TTGAATGGCTTAGATCTAAG+GGG + chr4_2:61414998-61415017 Msa0612880:intron 35.0%
!!! TCTAAGGGGTTGCTTTTTTT+AGG + chr4_2:61415012-61415031 Msa0612880:intron 35.0%
! AGTTGATATGTCCGTTAAGT+GGG - chr4_2:61415964-61415983 None:intergenic 35.0%
!! AAGTTGATATGTCCGTTAAG+TGG - chr4_2:61415965-61415984 None:intergenic 35.0%
! CTTAACGGACATATCAACTT+TGG + chr4_2:61415965-61415984 Msa0612880:intron 35.0%
! CATTTAAGACCTCAAAGTTG+AGG - chr4_2:61416038-61416057 None:intergenic 35.0%
!! CTCAACTTTGAGGTCTTAAA+TGG + chr4_2:61416036-61416055 Msa0612880:intron 35.0%
! CTATTTAGACCTTTTGTTGG+AGG - chr4_2:61416140-61416159 None:intergenic 35.0%
CTCCAACAAAAGGTCTAAAT+AGG + chr4_2:61416138-61416157 Msa0612880:intron 35.0%
! GTCCTATTTAGACCTTTTGT+TGG - chr4_2:61416143-61416162 None:intergenic 35.0%
TAAGACCTCAATGCTTAAGT+GGG - chr4_2:61416256-61416275 None:intergenic 35.0%
TTAAGACCTCAATGCTTAAG+TGG - chr4_2:61416257-61416276 None:intergenic 35.0%
CCCAAAAAATTTCTCCACAA+TGG + chr4_2:61416302-61416321 Msa0612880:intron 35.0%
TAGTTAAGACCTTACCATTG+TGG + chr4_2:61416353-61416372 Msa0612880:intron 35.0%
GTTTCACGTTTGTTTCAGAT+AGG - chr4_2:61416467-61416486 None:intergenic 35.0%
TTTAGGTCAAATACATCCCT+GGG - chr4_2:61416498-61416517 None:intergenic 35.0%
!! TTTTAGGTCAAATACATCCC+TGG - chr4_2:61416499-61416518 None:intergenic 35.0%
ATTTCTCATCATGTCTCACT+AGG + chr4_2:61416545-61416564 Msa0612880:intron 35.0%
TGCAAATGGGACATGAAAAT+TGG + chr4_2:61416869-61416888 Msa0612880:intron 35.0%
GTGCTTTCTAATCATCAACT+TGG - chr4_2:61417052-61417071 None:intergenic 35.0%
!! GTTGATGATTAGAAAGCACA+TGG + chr4_2:61417053-61417072 Msa0612880:intron 35.0%
GGCTCCTATGTGTTATATAA+TGG + chr4_2:61417074-61417093 Msa0612880:intron 35.0%
AACTTTCAAGCAACGTCTTA+TGG - chr4_2:61417330-61417349 None:intergenic 35.0%
GCTTGAAAGTTAGAACATGA+TGG + chr4_2:61417339-61417358 Msa0612880:intron 35.0%
! AAGTTAGAACATGATGGAAG+TGG + chr4_2:61417345-61417364 Msa0612880:intron 35.0%
TATAAAGATAAAGGGGAAGG+AGG + chr4_2:61417373-61417392 Msa0612880:intron 35.0%
! ACGTCTTCTCCTTTGAAAAA+TGG + chr4_2:61417405-61417424 Msa0612880:intron 35.0%
! CGTCTTCTCCTTTGAAAAAT+GGG + chr4_2:61417406-61417425 Msa0612880:intron 35.0%
!! CAAGTGTACCCATTTTTCAA+AGG - chr4_2:61417417-61417436 None:intergenic 35.0%
TTGAAAAATGGGTACACTTG+TGG + chr4_2:61417417-61417436 Msa0612880:intron 35.0%
GGCATTATAGTCATTTCAGT+TGG + chr4_2:61417642-61417661 Msa0612880:intron 35.0%
GTGTTTGGTATAAGAGAAAG+TGG + chr4_2:61417837-61417856 Msa0612880:intron 35.0%
TGCCCATGATTTATGTGAAA+AGG + chr4_2:61417964-61417983 Msa0612880:intron 35.0%
TTTGGTCGATTATTCAACCA+TGG + chr4_2:61418393-61418412 Msa0612880:intron 35.0%
! ATGATGTATTTTCCCCAAGA+AGG - chr4_2:61419084-61419103 None:intergenic 35.0%
GAAAATACATCATCAACCCT+TGG + chr4_2:61419091-61419110 Msa0612880:intron 35.0%
CCAGATTTAAATTTAGCCCA+AGG - chr4_2:61419111-61419130 None:intergenic 35.0%
CCTTGGGCTAAATTTAAATC+TGG + chr4_2:61419108-61419127 Msa0612880:intron 35.0%
TGGGTAAAAAGAACTTCTTG+TGG - chr4_2:61419145-61419164 None:intergenic 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG + chr4_2:61419145-61419164 Msa0612880:intron 35.0%
AAAAGGGATCAAAATTCGTC+GGG - chr4_2:61419255-61419274 None:intergenic 35.0%
AGGAGATAATGTGAGGAATA+TGG + chr4_2:61419337-61419356 Msa0612880:intron 35.0%
GGAGATAATGTGAGGAATAT+GGG + chr4_2:61419338-61419357 Msa0612880:intron 35.0%
ATAGGTAGAAATGTGAACCT+AGG + chr4_2:61419379-61419398 Msa0612880:intron 35.0%
!! AAGGTTGTTTCTCAACTTTC+AGG + chr4_2:61419716-61419735 Msa0612880:intron 35.0%
!! AAGAAGCATCTTCTTCTGTT+TGG - chr4_2:61419815-61419834 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG - chr4_2:61420167-61420186 None:intergenic 35.0%
!!! TGAAGGAGGTAAGTTTTTTG+TGG - chr4_2:61420613-61420632 None:intergenic 35.0%
TTACCAAGTAGAGGAATTCT+TGG - chr4_2:61420639-61420658 None:intergenic 35.0%
GTTGTGGATATGGTGAATAT+TGG + chr4_2:61420877-61420896 Msa0612880:three_prime_UTR 35.0%
GTGAATATTGGAGGCAATTA+AGG + chr4_2:61420889-61420908 Msa0612880:three_prime_UTR 35.0%
TAATGACATAGTATGTAGGG+TGG + chr4_2:61421064-61421083 Msa0612880:three_prime_UTR 35.0%
AAAACATACCGTGAAGGAAA+AGG + chr4_2:61421095-61421114 Msa0612880:three_prime_UTR 35.0%
! ATGTCTTACCTTTTCCTTCA+CGG - chr4_2:61421106-61421125 None:intergenic 35.0%
GACATTTCAAGAATGGTTGT+TGG + chr4_2:61421121-61421140 Msa0612880:three_prime_UTR 35.0%
TTGGAGTTTGGAGAGTTATT+AGG + chr4_2:61412932-61412951 Msa0612880:CDS 35.0%
! CCGTAAATGGTTTTTATAGC+AGG + chr4_2:61421210-61421229 Msa0612880:three_prime_UTR 35.0%
TGTTGGAGATGTTGAAAATG+AGG + chr4_2:61421304-61421323 Msa0612880:three_prime_UTR 35.0%
CTTGATTGCAGTTCTATCAA+TGG - chr4_2:61421390-61421409 None:intergenic 35.0%
CATTGATAGAACTGCAATCA+AGG + chr4_2:61421388-61421407 Msa0612880:three_prime_UTR 35.0%
TTTATTGCTCTAGCATATGG+TGG + chr4_2:61421508-61421527 Msa0612880:intron 35.0%
CGAGAAATAGGTGTAAACAA+AGG - chr4_2:61421553-61421572 None:intergenic 35.0%
ACATATGCTAACAACTAGCT+AGG + chr4_2:61421789-61421808 Msa0612880:intron 35.0%
CATATGCTAACAACTAGCTA+GGG + chr4_2:61421790-61421809 Msa0612880:intron 35.0%
ATATGCTAACAACTAGCTAG+GGG + chr4_2:61421791-61421810 Msa0612880:intron 35.0%
! TCTTTTACCCCTACAAATCA+TGG + chr4_2:61421876-61421895 Msa0612880:intron 35.0%
TAACGAACATGAATTCATCG+TGG + chr4_2:61422133-61422152 Msa0612880:intron 35.0%
AACGAACATGAATTCATCGT+GGG + chr4_2:61422134-61422153 Msa0612880:intron 35.0%
CATTCAACAAGACAAGAGAA+AGG + chr4_2:61422172-61422191 Msa0612880:intron 35.0%
!! CTGCAAAACTCTTCTGAAAT+TGG - chr4_2:61422481-61422500 None:intergenic 35.0%
! CAATTTCAGAAGAGTTTTGC+AGG + chr4_2:61422479-61422498 Msa0612880:intron 35.0%
! TTTTGCAGGTGGAATTTTGT+GGG + chr4_2:61422493-61422512 Msa0612880:intron 35.0%
! CCAATTTTACCCTTGTCATT+TGG - chr4_2:61422527-61422546 None:intergenic 35.0%
CCAAATGACAAGGGTAAAAT+TGG + chr4_2:61422524-61422543 Msa0612880:intron 35.0%
AGGGGTAAAGGATTAAATGT+AGG + chr4_2:61422564-61422583 Msa0612880:intron 35.0%
GGGGTAAAGGATTAAATGTA+GGG + chr4_2:61422565-61422584 Msa0612880:intron 35.0%
GGGTAAAGGATTAAATGTAG+GGG + chr4_2:61422566-61422585 Msa0612880:intron 35.0%
! GGATTAAATGTAGGGGTATA+AGG + chr4_2:61422573-61422592 Msa0612880:intron 35.0%
AGAATCCCGATTTAGTGTTA+CGG + chr4_2:61422700-61422719 Msa0612880:intron 35.0%
!!! GTGTCATTTGCACTAGTTTT+GGG - chr4_2:61422740-61422759 None:intergenic 35.0%
!!! AGTGTCATTTGCACTAGTTT+TGG - chr4_2:61422741-61422760 None:intergenic 35.0%
! TTTTGTAGAAAATGGGAGTG+TGG - chr4_2:61422802-61422821 None:intergenic 35.0%
! TTTTCTTGCTCTTAAGGCAT+TGG + chr4_2:61422900-61422919 Msa0612880:intron 35.0%
TTGATGGGATCATTTGATCT+TGG + chr4_2:61423059-61423078 Msa0612880:intron 35.0%
GATCTTGCATAAGATCGAAA+GGG - chr4_2:61423115-61423134 None:intergenic 35.0%
AGATCTTGCATAAGATCGAA+AGG - chr4_2:61423116-61423135 None:intergenic 35.0%
!!! GGATTAGTCGATTTTTGGAT+CGG - chr4_2:61423216-61423235 None:intergenic 35.0%
TCCAAAAATCGACTAATCCA+AGG + chr4_2:61423217-61423236 Msa0612880:intron 35.0%
CCAAAAATCGACTAATCCAA+GGG + chr4_2:61423218-61423237 Msa0612880:intron 35.0%
CAAAAATCGACTAATCCAAG+GGG + chr4_2:61423219-61423238 Msa0612880:intron 35.0%
GTACACCAAAATTTGCACTA+AGG + chr4_2:61423306-61423325 Msa0612880:intron 35.0%
TACCTACACAGTCTTAGAAT+GGG + chr4_2:61423599-61423618 Msa0612880:three_prime_UTR 35.0%
GATGCATAAATTGCAAGATG+AGG + chr4_2:61414045-61414064 Msa0612880:intron 35.0%
TCATGTAACTGAAGAGGATT+TGG + chr4_2:61423701-61423720 Msa0612880:three_prime_UTR 35.0%
!! TATCTTCCATTGATTTCCGA+GGG - chr4_2:61414189-61414208 None:intergenic 35.0%
!! ATATCTTCCATTGATTTCCG+AGG - chr4_2:61414190-61414209 None:intergenic 35.0%
CACAGGTAATAATCAATGCT+TGG + chr4_2:61414242-61414261 Msa0612880:intron 35.0%
!! CTTTCTGGTTTAAACTCTAG+AGG - chr4_2:61414301-61414320 None:intergenic 35.0%
!! CTCTAGAGTTTAAACCAGAA+AGG + chr4_2:61414299-61414318 Msa0612880:intron 35.0%
GAACTGTTCATAAACCTTTC+TGG - chr4_2:61423924-61423943 None:intergenic 35.0%
!!! AGGTGGTAAGTGTTTTTTGG+TGG - chr4_2:61412414-61412433 None:intergenic 40.0%
AAAGGAAATCTTGGAGGTGA+AGG - chr4_2:61412434-61412453 None:intergenic 40.0%
CCAAGTAAAGGAAATCTTGG+AGG - chr4_2:61412440-61412459 None:intergenic 40.0%
CCTCCAAGATTTCCTTTACT+TGG + chr4_2:61412437-61412456 Msa0612880:intron 40.0%
! CTTGGTAATCTCCATCAAGT+TGG + chr4_2:61412455-61412474 Msa0612880:intron 40.0%
AATCTTGGAGTGATCTGTGA+GGG - chr4_2:61412487-61412506 None:intergenic 40.0%
AAATCTTGGAGTGATCTGTG+AGG - chr4_2:61412488-61412507 None:intergenic 40.0%
!! TTATTTAGGGAAGGTACCAG+TGG + chr4_2:61412538-61412557 Msa0612880:intron 40.0%
!! TGCACAACTTGCTACATCTT+TGG - chr4_2:61412669-61412688 None:intergenic 40.0%
GATGTAGCAAGTTGTGCATA+TGG + chr4_2:61412671-61412690 Msa0612880:intron 40.0%
GTTGTGCATATGGTGAGTAT+TGG + chr4_2:61412681-61412700 Msa0612880:intron 40.0%
!! GTGAGTATTGGAGACAAGTA+AGG + chr4_2:61412693-61412712 Msa0612880:intron 40.0%
ATCTTATCGTCGTGTTAGAG+AGG + chr4_2:61412757-61412776 Msa0612880:CDS 40.0%
!! GTGGCTCTAGGAAAAAGATA+TGG + chr4_2:61412878-61412897 Msa0612880:CDS 40.0%
GTTGGAGTTTGGAGAGTTAT+TGG + chr4_2:61412931-61412950 Msa0612880:CDS 40.0%
TTACCCAACCATTTAAGCCA+AGG - chr4_2:61412983-61413002 None:intergenic 40.0%
TTGGCTTAAATGGTTGGGTA+AGG + chr4_2:61412982-61413001 Msa0612880:CDS 40.0%
CTATAGCAAGGCAGAAAAAG+TGG + chr4_2:61413015-61413034 Msa0612880:CDS 40.0%
ATCAGTGGTAGTAGATCTGA+TGG + chr4_2:61413082-61413101 Msa0612880:CDS 40.0%
! AGTAGATCTGATGGACATGT+TGG + chr4_2:61413091-61413110 Msa0612880:CDS 40.0%
CACCAAGTGTCCTAAGATAT+AGG + chr4_2:61413502-61413521 Msa0612880:intron 40.0%
AGCCTATATCTTAGGACACT+TGG - chr4_2:61413507-61413526 None:intergenic 40.0%
!! ATAGGCTTTGTTTGCGAGTT+TGG + chr4_2:61413520-61413539 Msa0612880:intron 40.0%
GGAAAAAAGGAATGAGCATG+TGG + chr4_2:61413566-61413585 Msa0612880:intron 40.0%
TGAGCATGTGGAAGAAATAG+AGG + chr4_2:61413578-61413597 Msa0612880:intron 40.0%
GAAATAGAGGAAAATGGGAG+AGG + chr4_2:61413591-61413610 Msa0612880:intron 40.0%
TTAGTTCCTCCAAATGAGGA+GGG - chr4_2:61413655-61413674 None:intergenic 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG - chr4_2:61413656-61413675 None:intergenic 40.0%
!! TGTATTGGAGGATGGTTTTG+GGG + chr4_2:61413680-61413699 Msa0612880:intron 40.0%
! AAGGAAAGGAAAGGCTTTGA+GGG - chr4_2:61413858-61413877 None:intergenic 40.0%
!! TATGGCTTTGTTTGCGAGTT+TGG - chr4_2:61413886-61413905 None:intergenic 40.0%
AAACTCGCAAACAAAGCCAT+AGG + chr4_2:61413885-61413904 Msa0612880:intron 40.0%
AACTCGCAAACAAAGCCATA+GGG + chr4_2:61413886-61413905 Msa0612880:intron 40.0%
!! CTACCTACACAGTTCTAGAA+TGG + chr4_2:61413990-61414009 Msa0612880:intron 40.0%
! GAGGGACTAATAATGGAATC+GGG - chr4_2:61414171-61414190 None:intergenic 40.0%
! CGAGGGACTAATAATGGAAT+CGG - chr4_2:61414172-61414191 None:intergenic 40.0%
CGATTCCATTATTAGTCCCT+CGG + chr4_2:61414170-61414189 Msa0612880:intron 40.0%
GATTTCCGAGGGACTAATAA+TGG - chr4_2:61414178-61414197 None:intergenic 40.0%
ATTAGTCCCTCGGAAATCAA+TGG + chr4_2:61414180-61414199 Msa0612880:intron 40.0%
TTGCAAGAGATCCTTCATGT+TGG + chr4_2:61414269-61414288 Msa0612880:intron 40.0%
TGCAAGAGATCCTTCATGTT+GGG + chr4_2:61414270-61414289 Msa0612880:intron 40.0%
! GAACTTATTCCATTTGGAGC+AGG + chr4_2:61414361-61414380 Msa0612880:intron 40.0%
! TTATTCCATTTGGAGCAGGA+AGG + chr4_2:61414365-61414384 Msa0612880:intron 40.0%
AAATTGCCTGATGGAATAGC+AGG + chr4_2:61414466-61414485 Msa0612880:intron 40.0%
AATTGCCTGATGGAATAGCA+GGG + chr4_2:61414467-61414486 Msa0612880:intron 40.0%
TGGAATAGCAGGGAAAGATT+TGG + chr4_2:61414477-61414496 Msa0612880:intron 40.0%
TGGTAGCTATTGCAATGAGA+GGG - chr4_2:61414543-61414562 None:intergenic 40.0%
! TTGGTAGCTATTGCAATGAG+AGG - chr4_2:61414544-61414563 None:intergenic 40.0%
AAAGGGATGAAACTAGGAGA+GGG - chr4_2:61414806-61414825 None:intergenic 40.0%
GTATCCAAAGGGATGAAACT+AGG - chr4_2:61414812-61414831 None:intergenic 40.0%
AAGTGCTAGCAAAGGACAAA+AGG - chr4_2:61414843-61414862 None:intergenic 40.0%
AGACTGATAAGTGCTAGCAA+AGG - chr4_2:61414851-61414870 None:intergenic 40.0%
TTTCACATAAGGTGACGTGT+GGG + chr4_2:61414911-61414930 Msa0612880:intron 40.0%
GGATTAGACATTTCCCTTCA+TGG - chr4_2:61414954-61414973 None:intergenic 40.0%
AAGTAGGCCAAATACCTTCT+CGG + chr4_2:61415712-61415731 Msa0612880:intron 40.0%
GAAATTTAAAGGACCCGAGA+AGG - chr4_2:61415729-61415748 None:intergenic 40.0%
!! CTTAACGGAGGTTGATAGAA+AGG - chr4_2:61415860-61415879 None:intergenic 40.0%
! GATCAACTTTGACTTAACGG+AGG - chr4_2:61415872-61415891 None:intergenic 40.0%
! CTGTTAAGCCAAAGTTGATC+TGG + chr4_2:61415895-61415914 Msa0612880:intron 40.0%
! TAAGCCAAAGTTGATCTGGT+TGG + chr4_2:61415899-61415918 Msa0612880:intron 40.0%
! AAGCCAAAGTTGATCTGGTT+GGG + chr4_2:61415900-61415919 Msa0612880:intron 40.0%
TTACCCAACCAGATCAACTT+TGG - chr4_2:61415906-61415925 None:intergenic 40.0%
GTAGTGGTTGAGTACCTATT+AGG - chr4_2:61416108-61416127 None:intergenic 40.0%
TAGGTACTCAACCACTACAA+TGG + chr4_2:61416110-61416129 Msa0612880:intron 40.0%
AATGGAGATCCTCCAACAAA+AGG + chr4_2:61416128-61416147 Msa0612880:intron 40.0%
CTTAATAGGTACCACCATTG+TGG - chr4_2:61416319-61416338 None:intergenic 40.0%
TGGTGGTACCTATTAAGTAC+CGG + chr4_2:61416322-61416341 Msa0612880:intron 40.0%
TAAGACCTTACCATTGTGGA+TGG + chr4_2:61416357-61416376 Msa0612880:intron 40.0%
TTAGACCATCCACAATGGTA+AGG - chr4_2:61416365-61416384 None:intergenic 40.0%
TACCATTGTGGATGGTCTAA+CGG + chr4_2:61416365-61416384 Msa0612880:intron 40.0%
ACGTGAAACTTAAAAGACCC+AGG + chr4_2:61416478-61416497 Msa0612880:intron 40.0%
CGTGAAACTTAAAAGACCCA+GGG + chr4_2:61416479-61416498 Msa0612880:intron 40.0%
TTGACTCTACCGAAGACTTA+TGG - chr4_2:61416813-61416832 None:intergenic 40.0%
GAGTGACTAACCCTAAGATT+TGG - chr4_2:61417024-61417043 None:intergenic 40.0%
! TTAGAACATGATGGAAGTGG+AGG + chr4_2:61417348-61417367 Msa0612880:intron 40.0%
TAGCTTAAGTTAACTCACGC+AGG - chr4_2:61417513-61417532 None:intergenic 40.0%
! CAGTTGGGAATGAGCATTTT+TGG + chr4_2:61417658-61417677 Msa0612880:intron 40.0%
!!! TGGGAATGAGCATTTTTGGT+TGG + chr4_2:61417662-61417681 Msa0612880:intron 40.0%
!!! GGGAATGAGCATTTTTGGTT+GGG + chr4_2:61417663-61417682 Msa0612880:intron 40.0%
AAAGCAATAAAGTTGGGGCT+TGG + chr4_2:61418066-61418085 Msa0612880:intron 40.0%
AAGCAATAAAGTTGGGGCTT+GGG + chr4_2:61418067-61418086 Msa0612880:intron 40.0%
AAACTGTTTGGGTAAAGAGC+AGG - chr4_2:61418127-61418146 None:intergenic 40.0%
GGGAGTGAGTAAAACTGTTT+GGG - chr4_2:61418138-61418157 None:intergenic 40.0%
TGGGAGTGAGTAAAACTGTT+TGG - chr4_2:61418139-61418158 None:intergenic 40.0%
AACGCATGTTAACATGCGTA+GGG - chr4_2:61418181-61418200 None:intergenic 40.0%
TAACGCATGTTAACATGCGT+AGG - chr4_2:61418182-61418201 None:intergenic 40.0%
CTACGTGATGTTATTAACCC+AGG + chr4_2:61418269-61418288 Msa0612880:intron 40.0%
CAACTCAAGAACACGTTTGT+TGG + chr4_2:61418368-61418387 Msa0612880:intron 40.0%
! AGAACACGTTTGTTGGACTT+TGG + chr4_2:61418375-61418394 Msa0612880:intron 40.0%
AAAATAGTGAGCAGCCTTCT+TGG + chr4_2:61419067-61419086 Msa0612880:intron 40.0%
AAATAGTGAGCAGCCTTCTT+GGG + chr4_2:61419068-61419087 Msa0612880:intron 40.0%
! AAATAGTGAGTAGCCGACTT+GGG - chr4_2:61419230-61419249 None:intergenic 40.0%
AAAATAGTGAGTAGCCGACT+TGG - chr4_2:61419231-61419250 None:intergenic 40.0%
! AGGAATATGGGAAGTATGTG+AGG + chr4_2:61419350-61419369 Msa0612880:intron 40.0%
! GGAATATGGGAAGTATGTGA+GGG + chr4_2:61419351-61419370 Msa0612880:intron 40.0%
GTTGAAAAGCTGACCAAAGT+TGG + chr4_2:61419467-61419486 Msa0612880:intron 40.0%
! AGCGCAAGTTAAGTTGCATA+TGG + chr4_2:61419631-61419650 Msa0612880:intron 40.0%
! GCGCAAGTTAAGTTGCATAT+GGG + chr4_2:61419632-61419651 Msa0612880:intron 40.0%
TCAACTTTCAGGCCAAATGT+GGG + chr4_2:61419727-61419746 Msa0612880:intron 40.0%
AAAACCTTTCCACCCACATT+TGG - chr4_2:61419742-61419761 None:intergenic 40.0%
!!! GGTGGAAAGGTTTTTAGTGT+GGG + chr4_2:61419748-61419767 Msa0612880:intron 40.0%
! CTGTTTGGAACTCTCAAAAC+AGG - chr4_2:61419800-61419819 None:intergenic 40.0%
! AAGAGGTTTGTTTGTGTGTG+GGG - chr4_2:61419856-61419875 None:intergenic 40.0%
! GAAGAGGTTTGTTTGTGTGT+GGG - chr4_2:61419857-61419876 None:intergenic 40.0%
! AGAAGAGGTTTGTTTGTGTG+TGG - chr4_2:61419858-61419877 None:intergenic 40.0%
ATAGGATAGGAAAGGAGAAG+AGG - chr4_2:61419873-61419892 None:intergenic 40.0%
CCTATATACATCTCACTTGG+TGG - chr4_2:61420411-61420430 None:intergenic 40.0%
CCACCAAGTGAGATGTATAT+AGG + chr4_2:61420408-61420427 Msa0612880:intron 40.0%
! AAGGAAAGACACCAAGTTGA+TGG - chr4_2:61420665-61420684 None:intergenic 40.0%
GAGATAAAGTATGGAGTGTG+CGG - chr4_2:61420689-61420708 None:intergenic 40.0%
GCAGAGGAAATTACAAGTAC+TGG - chr4_2:61420753-61420772 None:intergenic 40.0%
TCCAAAGATATGGCAAGTTG+TGG + chr4_2:61420861-61420880 Msa0612880:three_prime_UTR 40.0%
TCCACAACTTGCCATATCTT+TGG - chr4_2:61420865-61420884 None:intergenic 40.0%
GATATGGCAAGTTGTGGATA+TGG + chr4_2:61420867-61420886 Msa0612880:three_prime_UTR 40.0%
GTGGATATGGTGAATATTGG+AGG + chr4_2:61420880-61420899 Msa0612880:three_prime_UTR 40.0%
ATCTTATCATCGTGTCAGAG+AGG + chr4_2:61420953-61420972 Msa0612880:three_prime_UTR 40.0%
CTTGGAAAAACATACCGTGA+AGG + chr4_2:61421089-61421108 Msa0612880:three_prime_UTR 40.0%
CAAGAATGGTTGTTGGAGTT+TGG + chr4_2:61421128-61421147 Msa0612880:three_prime_UTR 40.0%
! TATACCTTGGCTTGATTGGT+TGG + chr4_2:61421184-61421203 Msa0612880:three_prime_UTR 40.0%
! ATACCTTGGCTTGATTGGTT+GGG + chr4_2:61421185-61421204 Msa0612880:three_prime_UTR 40.0%
CAACAGATCTACGACTAATG+TGG - chr4_2:61421289-61421308 None:intergenic 40.0%
CACATTAGTCGTAGATCTGT+TGG + chr4_2:61421287-61421306 Msa0612880:three_prime_UTR 40.0%
!! TGAGGAGCATAGTGATTTTG+TGG + chr4_2:61421322-61421341 Msa0612880:three_prime_UTR 40.0%
! TGCAATCAAGGCTTTGATAC+TGG + chr4_2:61421400-61421419 Msa0612880:three_prime_UTR 40.0%
! TCAAGGCTTTGATACTGGTA+AGG + chr4_2:61421405-61421424 Msa0612880:intron 40.0%
ATATGAAGCCTCCAAAAACC+AGG - chr4_2:61421474-61421493 None:intergenic 40.0%
ACAAGATCAACCCGAGAAAT+AGG - chr4_2:61421565-61421584 None:intergenic 40.0%
!! ATTGCAGGAATTTGCTGCTT+AGG + chr4_2:61421742-61421761 Msa0612880:intron 40.0%
! GTACTTGCCATGATTTGTAG+GGG - chr4_2:61421886-61421905 None:intergenic 40.0%
! GGTACTTGCCATGATTTGTA+GGG - chr4_2:61421887-61421906 None:intergenic 40.0%
! TGGTACTTGCCATGATTTGT+AGG - chr4_2:61421888-61421907 None:intergenic 40.0%
TTTGTATGAAGAGGAATGGG+TGG - chr4_2:61422007-61422026 None:intergenic 40.0%
GGGTTTGTATGAAGAGGAAT+GGG - chr4_2:61422010-61422029 None:intergenic 40.0%
TGGGTTTGTATGAAGAGGAA+TGG - chr4_2:61422011-61422030 None:intergenic 40.0%
CTTGGTAGAACATTGTTGCT+GGG - chr4_2:61422030-61422049 None:intergenic 40.0%
TCTTGGTAGAACATTGTTGC+TGG - chr4_2:61422031-61422050 None:intergenic 40.0%
GGAATACATCAAAGGTCTAC+CGG - chr4_2:61422437-61422456 None:intergenic 40.0%
! TTTCAGAAGAGTTTTGCAGG+TGG + chr4_2:61422482-61422501 Msa0612880:intron 40.0%
! GTTTTGCAGGTGGAATTTTG+TGG + chr4_2:61422492-61422511 Msa0612880:intron 40.0%
! TTTGCAGGTGGAATTTTGTG+GGG + chr4_2:61422494-61422513 Msa0612880:intron 40.0%
CAAGTCCGTAACACTAAATC+GGG - chr4_2:61422708-61422727 None:intergenic 40.0%
CCAAGTCCGTAACACTAAAT+CGG - chr4_2:61422709-61422728 None:intergenic 40.0%
!!! CCCTTGGATTAGTCGATTTT+TGG - chr4_2:61423221-61423240 None:intergenic 40.0%
AGCCAAAGCAAAAGTCTGTA+TGG + chr4_2:61423279-61423298 Msa0612880:intron 40.0%
! GTCCATACAGACTTTTGCTT+TGG - chr4_2:61423284-61423303 None:intergenic 40.0%
! ATTGAATCTGAGACCTTGAG+AGG + chr4_2:61423332-61423351 Msa0612880:intron 40.0%
ATGTCCTACATACATGCAGA+GGG - chr4_2:61423558-61423577 None:intergenic 40.0%
CTACCTACACAGTCTTAGAA+TGG + chr4_2:61423598-61423617 Msa0612880:three_prime_UTR 40.0%
GCAATTTATGCATCACGGTT+TGG - chr4_2:61423647-61423666 None:intergenic 40.0%
CAGAACTCATGTAACTGAAG+AGG + chr4_2:61414087-61414106 Msa0612880:intron 40.0%
! GAGGGACTAATAATGGAATC+GGG - chr4_2:61414171-61414190 None:intergenic 40.0%
! CGAGGGACTAATAATGGAAT+CGG - chr4_2:61414172-61414191 None:intergenic 40.0%
CGATTCCATTATTAGTCCCT+CGG + chr4_2:61414170-61414189 Msa0612880:intron 40.0%
GATTTCCGAGGGACTAATAA+TGG - chr4_2:61414178-61414197 None:intergenic 40.0%
ATTAGTCCCTCGGAAATCAA+TGG + chr4_2:61414180-61414199 Msa0612880:intron 40.0%
! GAACTTATTCCATTTGGAGC+AGG + chr4_2:61414361-61414380 Msa0612880:intron 40.0%
! TTATTCCATTTGGAGCAGGA+AGG + chr4_2:61414365-61414384 Msa0612880:intron 40.0%
TGCTGTTGCAGTGAATGAAT+TGG + chr4_2:61424019-61424038 Msa0612880:three_prime_UTR 40.0%
TATGATTGGAAATTGCCGGA+TGG + chr4_2:61424065-61424084 Msa0612880:three_prime_UTR 40.0%
! TTGGACATGTCTGAAACTGT+TGG + chr4_2:61424104-61424123 Msa0612880:three_prime_UTR 40.0%
! CATATTTGGTAGCTACTGCA+AGG - chr4_2:61424157-61424176 None:intergenic 40.0%
GAGGGAATAAGCCAACTTGA+TGG - chr4_2:61412469-61412488 None:intergenic 45.0%
ATAACATGTAGGGTGGCTCT+AGG + chr4_2:61412866-61412885 Msa0612880:CDS 45.0%
!! TGAAAAAGGTGGGGTATTGC+CGG + chr4_2:61412901-61412920 Msa0612880:CDS 45.0%
! GTTATTGAGGAGCACATCAG+TGG + chr4_2:61413067-61413086 Msa0612880:CDS 45.0%
! ATCTGATGGACATGTTGGTG+AGG + chr4_2:61413096-61413115 Msa0612880:CDS 45.0%
! TCTGATGGACATGTTGGTGA+GGG + chr4_2:61413097-61413116 Msa0612880:CDS 45.0%
! TGAGGGAACCAGTGATTTTG+TGG + chr4_2:61413114-61413133 Msa0612880:CDS 45.0%
GTTCAAAAGAGCAATGCTGC+TGG + chr4_2:61413151-61413170 Msa0612880:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr4_2:61413524-61413543 Msa0612880:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr4_2:61413525-61413544 Msa0612880:intron 45.0%
AAATGGGAGAGGAGAGCTTT+AGG + chr4_2:61413602-61413621 Msa0612880:intron 45.0%
AATGGGAGAGGAGAGCTTTA+GGG + chr4_2:61413603-61413622 Msa0612880:intron 45.0%
ACAAAACCCTCCTCATTTGG+AGG + chr4_2:61413646-61413665 Msa0612880:intron 45.0%
!!! GTATTGGAGGATGGTTTTGG+GGG + chr4_2:61413681-61413700 Msa0612880:intron 45.0%
!!! TATTGGAGGATGGTTTTGGG+GGG + chr4_2:61413682-61413701 Msa0612880:intron 45.0%
!! AGGAAAGGAAAGGCTTTGAG+GGG - chr4_2:61413857-61413876 None:intergenic 45.0%
GAAGGAAAGGAAAGGCTTTG+AGG - chr4_2:61413859-61413878 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr4_2:61413525-61413544 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr4_2:61413524-61413543 None:intergenic 45.0%
!! TGCCCATTCTAGAACTGTGT+AGG - chr4_2:61413996-61414015 None:intergenic 45.0%
AACGGCTATGACATTGAAGC+TGG + chr4_2:61414217-61414236 Msa0612880:intron 45.0%
TGACATTGAAGCTGGAACAC+AGG + chr4_2:61414225-61414244 Msa0612880:intron 45.0%
AGAGGTTCTTCCCAACATGA+AGG - chr4_2:61414283-61414302 None:intergenic 45.0%
GCAATAGCAAACAACACTCC+AGG - chr4_2:61414400-61414419 None:intergenic 45.0%
TCTTTCCCTGCTATTCCATC+AGG - chr4_2:61414475-61414494 None:intergenic 45.0%
CAAAGGGATGAAACTAGGAG+AGG - chr4_2:61414807-61414826 None:intergenic 45.0%
CTCTCCTAGTTTCATCCCTT+TGG + chr4_2:61414805-61414824 Msa0612880:intron 45.0%
GTTTCACATAAGGTGACGTG+TGG + chr4_2:61414910-61414929 Msa0612880:intron 45.0%
AGTAGGCCAAATACCTTCTC+GGG + chr4_2:61415713-61415732 Msa0612880:intron 45.0%
!! AAAGGACCCGAGAAGGTATT+TGG - chr4_2:61415722-61415741 None:intergenic 45.0%
ATATGTCCGTTAAGTGGGTG+AGG - chr4_2:61415959-61415978 None:intergenic 45.0%
!! TGGCTTAAGAGCATCCACAA+TGG + chr4_2:61416008-61416027 Msa0612880:intron 45.0%
AAAGTTGAGGGTCTCCATTG+TGG - chr4_2:61416025-61416044 None:intergenic 45.0%
AATGGAGACCCTCAACTTTG+AGG + chr4_2:61416026-61416045 Msa0612880:intron 45.0%
TTGGAGGATCTCCATTGTAG+TGG - chr4_2:61416124-61416143 None:intergenic 45.0%
GCGTATGTGACGTTATGTGT+TGG - chr4_2:61417252-61417271 None:intergenic 45.0%
GGGAATGAGCAAACTCTGTT+GGG - chr4_2:61417469-61417488 None:intergenic 45.0%
TGGGAATGAGCAAACTCTGT+TGG - chr4_2:61417470-61417489 None:intergenic 45.0%
AGCAATAAAGTTGGGGCTTG+GGG + chr4_2:61418068-61418087 Msa0612880:intron 45.0%
ACGCATGTTAACATGCGTAG+GGG - chr4_2:61418180-61418199 None:intergenic 45.0%
GACAAAATGAGGTTCTGCCT+GGG - chr4_2:61418289-61418308 None:intergenic 45.0%
AGACAAAATGAGGTTCTGCC+TGG - chr4_2:61418290-61418309 None:intergenic 45.0%
ACACACTTCTCACGCTAGTT+AGG + chr4_2:61418335-61418354 Msa0612880:intron 45.0%
! TGTTCTTGAGTTGTGACCAC+CGG - chr4_2:61418361-61418380 None:intergenic 45.0%
AATAGTGAGCAGCCTTCTTG+GGG + chr4_2:61419069-61419088 Msa0612880:intron 45.0%
! CCGCAGAAACTTTTTACCGT+GGG - chr4_2:61419164-61419183 None:intergenic 45.0%
CCCACGGTAAAAAGTTTCTG+CGG + chr4_2:61419161-61419180 Msa0612880:intron 45.0%
! ACCGCAGAAACTTTTTACCG+TGG - chr4_2:61419165-61419184 None:intergenic 45.0%
!! AATAGTGAGTAGCCGACTTG+GGG - chr4_2:61419229-61419248 None:intergenic 45.0%
AGAGAATTAGAGGGAGAGAG+TGG + chr4_2:61419313-61419332 Msa0612880:intron 45.0%
GAGAATTAGAGGGAGAGAGT+GGG + chr4_2:61419314-61419333 Msa0612880:intron 45.0%
GCAAGTTAACTCACGCTAGT+TGG - chr4_2:61419515-61419534 None:intergenic 45.0%
! TAACTTGCGCTAGTGCTAAG+TGG + chr4_2:61419527-61419546 Msa0612880:intron 45.0%
TGGGAATGAGCAGAACTGTT+TGG + chr4_2:61419673-61419692 Msa0612880:intron 45.0%
GGGAATGAGCAGAACTGTTT+GGG + chr4_2:61419674-61419693 Msa0612880:intron 45.0%
GAACTGTTTGGGTAAAGAGC+AGG + chr4_2:61419685-61419704 Msa0612880:intron 45.0%
CTCAACTTTCAGGCCAAATG+TGG + chr4_2:61419726-61419745 Msa0612880:intron 45.0%
!!! GGGTGGAAAGGTTTTTAGTG+TGG + chr4_2:61419747-61419766 Msa0612880:intron 45.0%
GGAACTCTCAAAACAGGCAA+AGG - chr4_2:61419794-61419813 None:intergenic 45.0%
! AGAGGTTTGTTTGTGTGTGG+GGG - chr4_2:61419855-61419874 None:intergenic 45.0%
TGAAAGAGAACTCGGCAGAA+AGG - chr4_2:61420490-61420509 None:intergenic 45.0%
AGAGGAATTCTTGGAGGTGA+AGG - chr4_2:61420630-61420649 None:intergenic 45.0%
CCAAGTAGAGGAATTCTTGG+AGG - chr4_2:61420636-61420655 None:intergenic 45.0%
CCTCCAAGAATTCCTCTACT+TGG + chr4_2:61420633-61420652 Msa0612880:CDS 45.0%
TGATGGAGGTTACCAAGTAG+AGG - chr4_2:61420648-61420667 None:intergenic 45.0%
! CTTGGTAACCTCCATCAACT+TGG + chr4_2:61420651-61420670 Msa0612880:CDS 45.0%
!! GAAAGACACCAAGTTGATGG+AGG - chr4_2:61420662-61420681 None:intergenic 45.0%
AAAGTATGGAGTGTGCGGTA+AGG - chr4_2:61420684-61420703 None:intergenic 45.0%
! TTTTCTTGCTGCATCAGCAG+AGG - chr4_2:61420769-61420788 None:intergenic 45.0%
ATAGTATGTAGGGTGGCACT+TGG + chr4_2:61421071-61421090 Msa0612880:three_prime_UTR 45.0%
! GATTGGTTGGGAACCGTAAA+TGG + chr4_2:61421197-61421216 Msa0612880:three_prime_UTR 45.0%
GTTTATTCTTTGGCTAGGCC+TGG + chr4_2:61421453-61421472 Msa0612880:intron 45.0%
GTTGCTGGGTTTGTATGAAG+AGG - chr4_2:61422016-61422035 None:intergenic 45.0%
! TTGCAGGTGGAATTTTGTGG+GGG + chr4_2:61422495-61422514 Msa0612880:intron 45.0%
ATGCACGATATGAATTGGCG+AGG - chr4_2:61422680-61422699 None:intergenic 45.0%
CCGATTTAGTGTTACGGACT+TGG + chr4_2:61422706-61422725 Msa0612880:intron 45.0%
! TAGTGGATGGCTTGAGATCT+TGG - chr4_2:61423366-61423385 None:intergenic 45.0%
AAGATCTCAAGCCATCCACT+AGG + chr4_2:61423365-61423384 Msa0612880:intron 45.0%
! CTAACTTGTGGTTTGCCTAG+TGG - chr4_2:61423383-61423402 None:intergenic 45.0%
CTTTCCCTCTGCATGTATGT+AGG + chr4_2:61423551-61423570 Msa0612880:intron 45.0%
CATGTCCTACATACATGCAG+AGG - chr4_2:61423559-61423578 None:intergenic 45.0%
GTAGGTAGTATCAGTACCTG+CGG - chr4_2:61413978-61413997 None:intergenic 45.0%
!! TGCCCATTCTAAGACTGTGT+AGG - chr4_2:61423604-61423623 None:intergenic 45.0%
CACAGTCTTAGAATGGGCAA+TGG + chr4_2:61423605-61423624 Msa0612880:three_prime_UTR 45.0%
GATGAGGTGAGAACTGTAGT+TGG + chr4_2:61423669-61423688 Msa0612880:three_prime_UTR 45.0%
AACGGCTATGACATTGAAGC+TGG + chr4_2:61414217-61414236 Msa0612880:intron 45.0%
TGACATTGAAGCTGGAACAC+AGG + chr4_2:61414225-61414244 Msa0612880:intron 45.0%
TTGCAAGAGACCCTTCAAGT+TGG + chr4_2:61423877-61423896 Msa0612880:three_prime_UTR 45.0%
! TGCAAGAGACCCTTCAAGTT+GGG + chr4_2:61423878-61423897 Msa0612880:three_prime_UTR 45.0%
GAGGTTCTTCCCAACTTGAA+GGG - chr4_2:61423890-61423909 None:intergenic 45.0%
AGAGGTTCTTCCCAACTTGA+AGG - chr4_2:61423891-61423910 None:intergenic 45.0%
TGGAGTAGCAGGGAAAGATT+TGG + chr4_2:61424085-61424104 Msa0612880:three_prime_UTR 45.0%
!! AAATAAATTAATTAAGTAAA+TGG - chr4_2:61415302-61415321 None:intergenic 5.0%
!! AAATTCAAAAATTATTTATA+CGG - chr4_2:61415352-61415371 None:intergenic 5.0%
!!! AATAAATTAATTTAGAATAT+AGG - chr4_2:61418536-61418555 None:intergenic 5.0%
GGAAATCTTGGAGGTGAAGG+TGG - chr4_2:61412431-61412450 None:intergenic 50.0%
GCTGAGGAAACTACAACCAC+TGG - chr4_2:61412557-61412576 None:intergenic 50.0%
CCAAACTCCAACATCAGCTC+CGG - chr4_2:61412923-61412942 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr4_2:61413523-61413542 Msa0612880:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr4_2:61413530-61413549 Msa0612880:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG + chr4_2:61413553-61413572 Msa0612880:intron 50.0%
! ATGGGAGAGGAGAGCTTTAG+GGG + chr4_2:61413604-61413623 Msa0612880:intron 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG - chr4_2:61413867-61413886 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr4_2:61413523-61413542 None:intergenic 50.0%
GCAAGATGAGGTGAGAACTG+TGG + chr4_2:61414057-61414076 Msa0612880:intron 50.0%
GATGAGGTGAGAACTGTGGT+TGG + chr4_2:61414061-61414080 Msa0612880:intron 50.0%
AGGTGGTTCTCTCTGACACT+TGG - chr4_2:61415939-61415958 None:intergenic 50.0%
GAACCACCTCACCCACTTAA+CGG + chr4_2:61415950-61415969 Msa0612880:intron 50.0%
! TGGGACCCACTTAAGCATTG+AGG + chr4_2:61416248-61416267 Msa0612880:intron 50.0%
TGAGGTCTTAAGTGAGACCC+TGG + chr4_2:61416266-61416285 Msa0612880:intron 50.0%
GAGGTCTTAAGTGAGACCCT+GGG + chr4_2:61416267-61416286 Msa0612880:intron 50.0%
CTCCGTTAGACCATCCACAA+TGG - chr4_2:61416370-61416389 None:intergenic 50.0%
CATTGTGGATGGTCTAACGG+AGG + chr4_2:61416368-61416387 Msa0612880:intron 50.0%
ATGGTCTAACGGAGGTTGAC+AGG + chr4_2:61416376-61416395 Msa0612880:intron 50.0%
TCTAACGGAGGTTGACAGGA+AGG + chr4_2:61416380-61416399 Msa0612880:intron 50.0%
CGATAACCCGTGCTATAGCA+CGG - chr4_2:61417296-61417315 None:intergenic 50.0%
CTGTGTGAGTTAAGTCACGC+TGG - chr4_2:61417595-61417614 None:intergenic 50.0%
ACTTCTCACGCTAGTTAGGC+CGG + chr4_2:61418339-61418358 Msa0612880:intron 50.0%
AATTAGAGGGAGAGAGTGGG+AGG + chr4_2:61419317-61419336 Msa0612880:intron 50.0%
GAGTGGGAGGAGATAATGTG+AGG + chr4_2:61419330-61419349 Msa0612880:intron 50.0%
GTTAACTCACGCTAGTTGGC+TGG - chr4_2:61419511-61419530 None:intergenic 50.0%
ACTTTCAGGCCAAATGTGGG+TGG + chr4_2:61419730-61419749 Msa0612880:intron 50.0%
GTGGGGGAGAGAAAAGTGAA+TGG - chr4_2:61419839-61419858 None:intergenic 50.0%
AAGAGAACTCGGCAGAAAGG+TGG - chr4_2:61420487-61420506 None:intergenic 50.0%
GGAATTCTTGGAGGTGAAGG+AGG - chr4_2:61420627-61420646 None:intergenic 50.0%
GTTCCCAACCAATCAAGCCA+AGG - chr4_2:61421191-61421210 None:intergenic 50.0%
GCTTTGATACTGGTAAGGCC+TGG + chr4_2:61421410-61421429 Msa0612880:intron 50.0%
!! CTTTGGCTAGGCCTGGTTTT+TGG + chr4_2:61421460-61421479 Msa0612880:intron 50.0%
TGCTAACAACTAGCTAGGGG+TGG + chr4_2:61421794-61421813 Msa0612880:intron 50.0%
! TGCAGGTGGAATTTTGTGGG+GGG + chr4_2:61422496-61422515 Msa0612880:intron 50.0%
GGGGTGAAGCCAAATGACAA+GGG + chr4_2:61422515-61422534 Msa0612880:intron 50.0%
TAAATAGGGCTCCCGCAAGT+GGG - chr4_2:61423258-61423277 None:intergenic 50.0%
TTAAATAGGGCTCCCGCAAG+TGG - chr4_2:61423259-61423278 None:intergenic 50.0%
! CTTGGAGTTTGCTCCTCTCA+AGG - chr4_2:61423348-61423367 None:intergenic 50.0%
! CTTGTGGTTTGCCTAGTGGA+TGG - chr4_2:61423379-61423398 None:intergenic 50.0%
ATGTAGGACATGTTTGCCGC+AGG + chr4_2:61423567-61423586 Msa0612880:intron 50.0%
GCAACAGCAAACAACACTCC+AGG - chr4_2:61424008-61424027 None:intergenic 50.0%
AAATTGCCGGATGGAGTAGC+AGG + chr4_2:61424074-61424093 Msa0612880:three_prime_UTR 50.0%
AATTGCCGGATGGAGTAGCA+GGG + chr4_2:61424075-61424094 Msa0612880:three_prime_UTR 50.0%
TCTTTCCCTGCTACTCCATC+CGG - chr4_2:61424083-61424102 None:intergenic 50.0%
! TTGGTAGCTACTGCAAGGAG+AGG - chr4_2:61424152-61424171 None:intergenic 50.0%
!! CTGACTTGCTGCATCAGCTG+AGG - chr4_2:61412573-61412592 None:intergenic 55.0%
CTCAGCTGATGCAGCAAGTC+AGG + chr4_2:61412571-61412590 Msa0612880:intron 55.0%
GGTATTGCCGGAGCTGATGT+TGG + chr4_2:61412913-61412932 Msa0612880:CDS 55.0%
CCGGAGCTGATGTTGGAGTT+TGG + chr4_2:61412920-61412939 Msa0612880:CDS 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr4_2:61413529-61413548 Msa0612880:intron 55.0%
!! TGGGAGAGGAGAGCTTTAGG+GGG + chr4_2:61413605-61413624 Msa0612880:intron 55.0%
CGAGTTTGGAGGGGAAGGAA+AGG - chr4_2:61413872-61413891 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr4_2:61413529-61413548 None:intergenic 55.0%
! CTGCAGGACATGTTTGCTGC+AGG + chr4_2:61413959-61413978 Msa0612880:intron 55.0%
CCTCTCCTTCCTGCTCCAAA+TGG - chr4_2:61414373-61414392 None:intergenic 55.0%
! CCATTTGGAGCAGGAAGGAG+AGG + chr4_2:61414370-61414389 Msa0612880:intron 55.0%
GGCTGCAGCAACCCTTTCAA+AGG + chr4_2:61414611-61414630 Msa0612880:intron 55.0%
TGTCCGTTAAGTGGGTGAGG+TGG - chr4_2:61415956-61415975 None:intergenic 55.0%
!! TGGGGGTCTTCTAAGACCCA+GGG - chr4_2:61416286-61416305 None:intergenic 55.0%
!! TTGGGGGTCTTCTAAGACCC+AGG - chr4_2:61416287-61416306 None:intergenic 55.0%
ACGTCACATACGCCACAACG+CGG + chr4_2:61417259-61417278 Msa0612880:intron 55.0%
GTGCTATAGCACGGACACCA+CGG - chr4_2:61417287-61417306 None:intergenic 55.0%
GTGGTGTCCGTGCTATAGCA+CGG + chr4_2:61417286-61417305 Msa0612880:intron 55.0%
TGGTGTCCGTGCTATAGCAC+GGG + chr4_2:61417287-61417306 Msa0612880:intron 55.0%
TACATCAGCGTGACTCACGC+AGG + chr4_2:61417620-61417639 Msa0612880:intron 55.0%
ACATCAGCGTGACTCACGCA+GGG + chr4_2:61417621-61417640 Msa0612880:intron 55.0%
TGGGGAAGTGATCGACCGTT+GGG - chr4_2:61419211-61419230 None:intergenic 55.0%
TTGGGGAAGTGATCGACCGT+TGG - chr4_2:61419212-61419231 None:intergenic 55.0%
GGTCGATCACTTCCCCAAGT+CGG + chr4_2:61419214-61419233 Msa0612880:intron 55.0%
CAGGCCAAATGTGGGTGGAA+AGG + chr4_2:61419735-61419754 Msa0612880:intron 55.0%
GGTGGACATGGCTTAAGCTG+TGG - chr4_2:61420469-61420488 None:intergenic 55.0%
ACTCGGCAGAAAGGTGGACA+TGG - chr4_2:61420481-61420500 None:intergenic 55.0%
!! TGGCTAGGCCTGGTTTTTGG+AGG + chr4_2:61421463-61421482 Msa0612880:intron 55.0%
GGGGGTGAAGCCAAATGACA+AGG + chr4_2:61422514-61422533 Msa0612880:intron 55.0%
GTGTTACGGACTTGGACGCT+TGG + chr4_2:61422714-61422733 Msa0612880:intron 55.0%
CCTCTCCTTCCTGCTCCAAA+TGG - chr4_2:61414373-61414392 None:intergenic 55.0%
! CCATTTGGAGCAGGAAGGAG+AGG + chr4_2:61414370-61414389 Msa0612880:intron 55.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr4_2:61413534-61413553 Msa0612880:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr4_2:61413535-61413554 Msa0612880:intron 60.0%
GCAGGAAGGAGAGGTTGTCC+TGG + chr4_2:61414379-61414398 Msa0612880:intron 60.0%
! AGTTGGGGCTTGGGGCACTT+TGG + chr4_2:61418076-61418095 Msa0612880:intron 60.0%
TCTCACGCTAGTTAGGCCGG+TGG + chr4_2:61418342-61418361 Msa0612880:intron 60.0%
TCAATCCGACCGCCCACTTG+CGG + chr4_2:61423243-61423262 Msa0612880:intron 60.0%
GCAGGAAGGAGAGGTTGTCC+TGG + chr4_2:61414379-61414398 Msa0612880:intron 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG + chr4_2:61413533-61413552 Msa0612880:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG + chr4_2:61413539-61413558 Msa0612880:intron 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG + chr4_2:61413545-61413564 Msa0612880:intron 65.0%
GGCGGTCGGATTGATCCCCT+TGG - chr4_2:61423237-61423256 None:intergenic 65.0%
CAATCCGACCGCCCACTTGC+GGG + chr4_2:61423244-61423263 Msa0612880:intron 65.0%
ATAGGGCTCCCGCAAGTGGG+CGG - chr4_2:61423255-61423274 None:intergenic 65.0%
GGGGAAGGGAGGGGAAGGCT+TGG + chr4_2:61413544-61413563 Msa0612880:intron 70.0%
! TACGCCACAACGCGGTGCCG+TGG + chr4_2:61417267-61417286 Msa0612880:intron 70.0%
GACACCACGGCACCGCGTTG+TGG - chr4_2:61417274-61417293 None:intergenic 70.0%
GGCTCCCGCAAGTGGGCGGT+CGG - chr4_2:61423251-61423270 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 61412237 61424333 61412237 ID=Msa0612880;Name=Msa0612880
chr4_2 mRNA 61412237 61424333 61412237 ID=Msa0612880-mRNA-1;Parent=Msa0612880;Name=Msa0612880-mRNA-1;_AED=0.18;_eAED=0.18;_QI=41|0.25|0.2|1|0.25|0.2|5|1456|274
chr4_2 exon 61412237 61412350 61412237 ID=Msa0612880-mRNA-1:exon:16738;Parent=Msa0612880-mRNA-1
chr4_2 exon 61412711 61412953 61412711 ID=Msa0612880-mRNA-1:exon:16739;Parent=Msa0612880-mRNA-1
chr4_2 exon 61412969 61413213 61412969 ID=Msa0612880-mRNA-1:exon:16740;Parent=Msa0612880-mRNA-1
chr4_2 exon 61420463 61421421 61420463 ID=Msa0612880-mRNA-1:exon:16741;Parent=Msa0612880-mRNA-1
chr4_2 exon 61423573 61424333 61423573 ID=Msa0612880-mRNA-1:exon:16742;Parent=Msa0612880-mRNA-1
chr4_2 five_prime_UTR 61412237 61412277 61412237 ID=Msa0612880-mRNA-1:five_prime_utr;Parent=Msa0612880-mRNA-1
chr4_2 CDS 61412278 61412350 61412278 ID=Msa0612880-mRNA-1:cds;Parent=Msa0612880-mRNA-1
chr4_2 CDS 61412711 61412953 61412711 ID=Msa0612880-mRNA-1:cds;Parent=Msa0612880-mRNA-1
chr4_2 CDS 61412969 61413213 61412969 ID=Msa0612880-mRNA-1:cds;Parent=Msa0612880-mRNA-1
chr4_2 CDS 61420463 61420726 61420463 ID=Msa0612880-mRNA-1:cds;Parent=Msa0612880-mRNA-1
chr4_2 three_prime_UTR 61420727 61421421 61420727 ID=Msa0612880-mRNA-1:three_prime_utr;Parent=Msa0612880-mRNA-1
chr4_2 three_prime_UTR 61423573 61424333 61423573 ID=Msa0612880-mRNA-1:three_prime_utr;Parent=Msa0612880-mRNA-1
Gene Sequence

>Msa0612880

ATGTCAACTTTTCTGCCAAGTTCTCTTTCACATGAAAGCTTCTATTATTCATTACTCCCTATGCTTTTCTTTATAAGGAGTCTCAGTGTGTTACACCTTTTGAGTAACAAAAGGGTTCAATCTTATCGTCGTGTTAGAGAGGAAGAAACTGCAAAAATGATGCAAAATATTCAAGAGAAGAGTTCTTGTGTGAATTTAACAGAGTTGTGTTCTACAATTACTAATGATATAACATGTAGGGTGGCTCTAGGAAAAAGATATGGTGAAAAAGGTGGGGTATTGCCGGAGCTGATGTTGGAGTTTGGAGAGTTATTGGGAGATTATATACCTTGGCTTAAATGGTTGGGTAAGGTTAATGGTTTCTATAGCAAGGCAGAAAAAGTGGCTACACATTTGGATGAGTTTTTTGAGAAAGTTATTGAGGAGCACATCAGTGGTAGTAGATCTGATGGACATGTTGGTGAGGGAACCAGTGATTTTGTGGACATTTTGCTTTCAGTTCAAAAGAGCAATGCTGCTGGCTTCTCAATTGATAGAACTGCAATTAAGGGTTTGTTACTGAAACCACAGCTTAAGCCATGTCCACCTTTCTGCCGAGTTCTCTTTCACATGAAATCTTCTCTTCATTCCCTATGTTGTTCTTCACTATCTTTCCACTATTTCTTTCTCTTTTCTTCATCATCAAATGGTATTTTAATAACTCTGTCACCACAAAAAACTTACCTCCTTCACCTCCAAGAATTCCTCTACTTGGTAACCTCCATCAACTTGGTGTCTTTCCTTACCGCACACTCCATACTTTATCTCACAAATATGGCCCTTTAA
Protein sequence

>Msa0612880

MSTFLPSSLSHESFYYSLLPMLFFIRSLSVLHLLSNKRVQSYRRVREEETAKMMQNIQEKSSCVNLTELCSTITNDITCRVALGKRYGEKGGVLPELMLEFGELLGDYIPWLKWLGKVNGFYSKAEKVATHLDEFFEKVIEEHISGSRSDGHVGEGTSDFVDILLSVQKSNAAGFSIDRTAIKGLLLKPQLKPCPPFCRVLFHMKSSLHSLCCSSLSFHYFFLFSSSSNGILITLSPQKTYLLHLQEFLYLVTSINLVSFLTAHSILYLTNMAL*