Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339540 | XP_013465378.1 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 3.64e-120 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339540 | sp|Q42540|UBC7_ARATH | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.18e-106 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0339540 | -0.824080 | 9.797623e-54 | -8.615850e-47 |
| Msa0008250 | Msa0339540 | -0.837473 | 5.090479e-57 | -8.615850e-47 |
| Msa0034100 | Msa0339540 | -0.822276 | 2.583795e-53 | -8.615850e-47 |
| Msa0039590 | Msa0339540 | -0.819405 | 1.181985e-52 | -8.615850e-47 |
| Msa0053360 | Msa0339540 | -0.802419 | 5.660358e-49 | -8.615850e-47 |
| Msa0064170 | Msa0339540 | -0.809877 | 1.522743e-50 | -8.615850e-47 |
| Msa0064190 | Msa0339540 | -0.812187 | 4.809748e-51 | -8.615850e-47 |
| Msa0064250 | Msa0339540 | -0.804234 | 2.382644e-49 | -8.615850e-47 |
| Msa0094990 | Msa0339540 | -0.808893 | 2.476219e-50 | -8.615850e-47 |
| Msa0110240 | Msa0339540 | 0.834681 | 2.603688e-56 | -8.615850e-47 |
| Msa0120320 | Msa0339540 | -0.816377 | 5.705186e-52 | -8.615850e-47 |
| Msa0121080 | Msa0339540 | -0.831497 | 1.614309e-55 | -8.615850e-47 |
| Msa0128110 | Msa0339540 | -0.818442 | 1.956332e-52 | -8.615850e-47 |
| Msa0128740 | Msa0339540 | 0.806243 | 9.041264e-50 | -8.615850e-47 |
| Msa0131090 | Msa0339540 | -0.806118 | 9.606310e-50 | -8.615850e-47 |
| Msa0147540 | Msa0339540 | -0.845493 | 3.923987e-59 | -8.615850e-47 |
| Msa0147800 | Msa0339540 | -0.823560 | 1.296732e-53 | -8.615850e-47 |
| Msa0154750 | Msa0339540 | 0.811540 | 6.652444e-51 | -8.615850e-47 |
| Msa0195140 | Msa0339540 | -0.837591 | 4.749783e-57 | -8.615850e-47 |
| Msa0195150 | Msa0339540 | -0.801667 | 8.080285e-49 | -8.615850e-47 |
| Msa0196530 | Msa0339540 | 0.802903 | 4.499060e-49 | -8.615850e-47 |
| Msa0218430 | Msa0339540 | -0.840733 | 7.279657e-58 | -8.615850e-47 |
| Msa0223050 | Msa0339540 | 0.966143 | 1.575552e-125 | -8.615850e-47 |
| Msa0238140 | Msa0339540 | 0.801151 | 1.030698e-48 | -8.615850e-47 |
| Msa0238420 | Msa0339540 | 0.838247 | 3.221529e-57 | -8.615850e-47 |
| Msa0239610 | Msa0339540 | -0.863284 | 2.779367e-64 | -8.615850e-47 |
| Msa0240590 | Msa0339540 | -0.826847 | 2.167098e-54 | -8.615850e-47 |
| Msa0240600 | Msa0339540 | -0.815464 | 9.121462e-52 | -8.615850e-47 |
| Msa0251140 | Msa0339540 | -0.805072 | 1.592286e-49 | -8.615850e-47 |
| Msa0264220 | Msa0339540 | 0.871982 | 4.509528e-67 | -8.615850e-47 |
| Msa0269430 | Msa0339540 | -0.806677 | 7.323462e-50 | -8.615850e-47 |
| Msa0279090 | Msa0339540 | -0.812089 | 5.052258e-51 | -8.615850e-47 |
| Msa0302220 | Msa0339540 | 0.932067 | 1.482871e-94 | -8.615850e-47 |
| Msa0309490 | Msa0339540 | -0.816337 | 5.825996e-52 | -8.615850e-47 |
| Msa0309670 | Msa0339540 | -0.804677 | 1.925946e-49 | -8.615850e-47 |
| Msa0324220 | Msa0339540 | 0.808060 | 3.728071e-50 | -8.615850e-47 |
| Msa0339540 | Msa0358470 | 0.810467 | 1.136241e-50 | -8.615850e-47 |
| Msa0339540 | Msa0375500 | 0.829138 | 6.086182e-55 | -8.615850e-47 |
| Msa0339540 | Msa0395300 | -0.818966 | 1.487721e-52 | -8.615850e-47 |
| Msa0339540 | Msa0424300 | 0.808380 | 3.186694e-50 | -8.615850e-47 |
| Msa0339540 | Msa0438440 | -0.819932 | 8.958776e-53 | -8.615850e-47 |
| Msa0339540 | Msa0459920 | -0.802403 | 5.703288e-49 | -8.615850e-47 |
| Msa0339540 | Msa0471210 | 0.828908 | 6.921317e-55 | -8.615850e-47 |
| Msa0339540 | Msa0508780 | -0.804767 | 1.844602e-49 | -8.615850e-47 |
| Msa0339540 | Msa0515930 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0339540 | Msa0521190 | -0.807944 | 3.946088e-50 | -8.615850e-47 |
| Msa0339540 | Msa0553570 | -0.801089 | 1.061396e-48 | -8.615850e-47 |
| Msa0339540 | Msa0561420 | -0.830386 | 3.023254e-55 | -8.615850e-47 |
| Msa0339540 | Msa0562680 | -0.808392 | 3.167973e-50 | -8.615850e-47 |
| Msa0339540 | Msa0563440 | 0.823569 | 1.290768e-53 | -8.615850e-47 |
| Msa0339540 | Msa0565150 | -0.823065 | 1.692523e-53 | -8.615850e-47 |
| Msa0339540 | Msa0565530 | -0.816132 | 6.473981e-52 | -8.615850e-47 |
| Msa0339540 | Msa0569540 | -0.825990 | 3.468136e-54 | -8.615850e-47 |
| Msa0339540 | Msa0569930 | -0.814602 | 1.417393e-51 | -8.615850e-47 |
| Msa0339540 | Msa0573970 | -0.807651 | 4.555575e-50 | -8.615850e-47 |
| Msa0339540 | Msa0576640 | -0.800532 | 1.379269e-48 | -8.615850e-47 |
| Msa0339540 | Msa0612880 | -0.800844 | 1.191182e-48 | -8.615850e-47 |
| Msa0339540 | Msa0615430 | -0.824920 | 6.212925e-54 | -8.615850e-47 |
| Msa0339540 | Msa0647860 | -0.800677 | 1.288216e-48 | -8.615850e-47 |
| Msa0339540 | Msa0651870 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0339540 | Msa0651890 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0339540 | Msa0654880 | -0.829223 | 5.806019e-55 | -8.615850e-47 |
| Msa0339540 | Msa0662670 | -0.805982 | 1.026192e-49 | -8.615850e-47 |
| Msa0339540 | Msa0663580 | -0.803303 | 3.717755e-49 | -8.615850e-47 |
| Msa0339540 | Msa0690580 | -0.801207 | 1.003838e-48 | -8.615850e-47 |
| Msa0339540 | Msa0698480 | -0.836383 | 9.665833e-57 | -8.615850e-47 |
| Msa0339540 | Msa0698650 | -0.830505 | 2.828282e-55 | -8.615850e-47 |
| Msa0339540 | Msa0708870 | -0.806856 | 6.713213e-50 | -8.615850e-47 |
| Msa0339540 | Msa0717540 | -0.801095 | 1.058257e-48 | -8.615850e-47 |
| Msa0339540 | Msa0752540 | -0.809801 | 1.581306e-50 | -8.615850e-47 |
| Msa0339540 | Msa0756670 | -0.815985 | 6.983788e-52 | -8.615850e-47 |
| Msa0339540 | Msa0797980 | -0.841844 | 3.714230e-58 | -8.615850e-47 |
| Msa0339540 | Msa0807100 | -0.800831 | 1.198284e-48 | -8.615850e-47 |
| Msa0339540 | Msa0829430 | -0.806421 | 8.292127e-50 | -8.615850e-47 |
| Msa0339540 | Msa0830830 | -0.817949 | 2.528526e-52 | -8.615850e-47 |
| Msa0339540 | Msa0836060 | -0.808391 | 3.169003e-50 | -8.615850e-47 |
| Msa0339540 | Msa0838100 | -0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0339540 | Msa0884840 | -0.820855 | 5.501578e-53 | -8.615850e-47 |
| Msa0339540 | Msa0888900 | -0.817251 | 3.633000e-52 | -8.615850e-47 |
| Msa0339540 | Msa0912110 | -0.804720 | 1.886534e-49 | -8.615850e-47 |
| Msa0339540 | Msa0925630 | -0.822711 | 2.046379e-53 | -8.615850e-47 |
| Msa0339540 | Msa0931550 | -0.820425 | 6.904949e-53 | -8.615850e-47 |
| Msa0339540 | Msa0936650 | -0.809023 | 2.321787e-50 | -8.615850e-47 |
| Msa0339540 | Msa0980980 | -0.810899 | 9.164763e-51 | -8.615850e-47 |
| Msa0339540 | Msa0985040 | -0.802243 | 6.153128e-49 | -8.615850e-47 |
| Msa0339540 | Msa1004720 | -0.817558 | 3.099228e-52 | -8.615850e-47 |
| Msa0339540 | Msa1009220 | -0.800136 | 1.660227e-48 | -8.615850e-47 |
| Msa0339540 | Msa1031530 | -0.818186 | 2.235226e-52 | -8.615850e-47 |
| Msa0339540 | Msa1035640 | -0.814719 | 1.335222e-51 | -8.615850e-47 |
| Msa0339540 | Msa1043020 | -0.864359 | 1.286571e-64 | -8.615850e-47 |
| Msa0339540 | Msa1050320 | -0.803111 | 4.074230e-49 | -8.615850e-47 |
| Msa0339540 | Msa1052030 | -0.837629 | 4.642289e-57 | -8.615850e-47 |
| Msa0339540 | Msa1070630 | -0.803414 | 3.526742e-49 | -8.615850e-47 |
| Msa0339540 | Msa1078600 | -0.810559 | 1.085455e-50 | -8.615850e-47 |
| Msa0339540 | Msa1078770 | -0.808719 | 2.697447e-50 | -8.615850e-47 |
| Msa0339540 | Msa1084210 | -0.803458 | 3.452925e-49 | -8.615850e-47 |
| Msa0339540 | Msa1096510 | -0.852138 | 5.618075e-61 | -8.615850e-47 |
| Msa0339540 | Msa1096520 | -0.859402 | 4.241445e-63 | -8.615850e-47 |
| Msa0339540 | Msa1096570 | -0.860517 | 1.954222e-63 | -8.615850e-47 |
| Msa0339540 | Msa1098350 | -0.802227 | 6.199881e-49 | -8.615850e-47 |
| Msa0339540 | Msa1109500 | -0.803443 | 3.478288e-49 | -8.615850e-47 |
| Msa0339540 | Msa1128230 | -0.807842 | 4.148236e-50 | -8.615850e-47 |
| Msa0339540 | Msa1134420 | -0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0339540 | Msa1140480 | -0.800822 | 1.203628e-48 | -8.615850e-47 |
| Msa0339540 | Msa1143860 | -0.801466 | 8.887546e-49 | -8.615850e-47 |
| Msa0339540 | Msa1158450 | -0.805632 | 1.215746e-49 | -8.615850e-47 |
| Msa0339540 | Msa1169600 | -0.811088 | 8.339593e-51 | -8.615850e-47 |
| Msa0339540 | Msa1171630 | 0.835492 | 1.626055e-56 | -8.615850e-47 |
| Msa0339540 | Msa1175850 | -0.815931 | 7.179085e-52 | -8.615850e-47 |
| Msa0339540 | Msa1181730 | -0.827388 | 1.608444e-54 | -8.615850e-47 |
| Msa0339540 | Msa1199750 | -0.805253 | 1.459191e-49 | -8.615850e-47 |
| Msa0339540 | Msa1225140 | -0.801172 | 1.020632e-48 | -8.615850e-47 |
| Msa0339540 | Msa1235940 | -0.815979 | 7.002682e-52 | -8.615850e-47 |
| Msa0339540 | Msa1251500 | 0.806787 | 6.943617e-50 | -8.615850e-47 |
| Msa0339540 | Msa1269370 | -0.807468 | 4.980890e-50 | -8.615850e-47 |
| Msa0339540 | Msa1277580 | -0.821968 | 3.044780e-53 | -8.615850e-47 |
| Msa0339540 | Msa1279310 | -0.810738 | 9.930233e-51 | -8.615850e-47 |
| Msa0339540 | Msa1279320 | -0.816415 | 5.595184e-52 | -8.615850e-47 |
| Msa0339540 | Msa1298060 | 0.802440 | 5.604008e-49 | -8.615850e-47 |
| Msa0339540 | Msa1322980 | 0.804099 | 2.541678e-49 | -8.615850e-47 |
| Msa0339540 | Msa1326800 | -0.819595 | 1.069663e-52 | -8.615850e-47 |
| Msa0339540 | Msa1327690 | -0.812157 | 4.882620e-51 | -8.615850e-47 |
| Msa0339540 | Msa1345390 | 0.810320 | 1.222284e-50 | -8.615850e-47 |
| Msa0339540 | Msa1348860 | -0.811313 | 7.452922e-51 | -8.615850e-47 |
| Msa0339540 | Msa1356730 | -0.802654 | 5.064311e-49 | -8.615850e-47 |
| Msa0339540 | Msa1376010 | -0.800832 | 1.197754e-48 | -8.615850e-47 |
| Msa0339540 | Msa1402000 | 0.823386 | 1.424140e-53 | -8.615850e-47 |
| Msa0339540 | Msa1407860 | -0.808648 | 2.793280e-50 | -8.615850e-47 |
| Msa0339540 | Msa1408860 | -0.800735 | 1.253405e-48 | -8.615850e-47 |
| Msa0339540 | Msa1408900 | -0.803018 | 4.258754e-49 | -8.615850e-47 |
| Msa0339540 | Msa1409060 | 0.847604 | 1.040773e-59 | -8.615850e-47 |
| Msa0339540 | Msa1436660 | -0.800666 | 1.295235e-48 | -8.615850e-47 |
| Msa0339540 | Msa1450780 | -0.829987 | 3.785010e-55 | -8.615850e-47 |
| Msa0339540 | Msa1453180 | -0.823834 | 1.118675e-53 | -8.615850e-47 |
| Msa0339540 | Msa1456620 | -0.815530 | 8.819474e-52 | -8.615850e-47 |
| Msa0339540 | Msa1460530 | -0.840972 | 6.299855e-58 | -8.615850e-47 |
| Msa0339540 | Msa1463500 | -0.800918 | 1.150286e-48 | -8.615850e-47 |
| Msa0339540 | Msa1463890 | -0.803423 | 3.511523e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339540 | MtrunA17_Chr2g0328001 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 3.35e-124 | 346 |
| Msa0339540 | MtrunA17_Chr4g0031181 | 93.373 | 166 | 11 | 0 | 1 | 166 | 1 | 166 | 2.80e-107 | 303 |
| Msa0339540 | MtrunA17_Chr8g0362321 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 1.05e-33 | 116 |
| Msa0339540 | MtrunA17_Chr4g0060351 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 5.11e-33 | 114 |
| Msa0339540 | MtrunA17_Chr7g0275361 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 1.74e-30 | 108 |
| Msa0339540 | MtrunA17_Chr3g0108261 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 5.86e-29 | 104 |
| Msa0339540 | MtrunA17_Chr5g0432831 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 7.59e-29 | 103 |
| Msa0339540 | MtrunA17_Chr1g0154011 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 2.81e-28 | 102 |
| Msa0339540 | MtrunA17_Chr4g0037011 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 3.34e-28 | 102 |
| Msa0339540 | MtrunA17_Chr8g0369311 | 33.758 | 157 | 90 | 2 | 5 | 161 | 58 | 200 | 1.49e-26 | 99.8 |
| Msa0339540 | MtrunA17_Chr4g0038891 | 36.184 | 152 | 82 | 3 | 9 | 160 | 37 | 173 | 4.82e-26 | 97.8 |
| Msa0339540 | MtrunA17_Chr1g0199951 | 36.774 | 155 | 84 | 2 | 3 | 157 | 40 | 180 | 1.04e-24 | 94.7 |
| Msa0339540 | MtrunA17_Chr5g0396451 | 34.868 | 152 | 84 | 3 | 9 | 160 | 37 | 173 | 6.97e-24 | 92.0 |
| Msa0339540 | MtrunA17_Chr2g0316211 | 34.074 | 135 | 75 | 2 | 11 | 145 | 12 | 132 | 1.06e-23 | 90.9 |
| Msa0339540 | MtrunA17_Chr2g0316201 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 3.78e-23 | 89.4 |
| Msa0339540 | MtrunA17_Chr3g0139901 | 33.613 | 119 | 65 | 2 | 28 | 145 | 28 | 133 | 6.60e-22 | 86.3 |
| Msa0339540 | MtrunA17_Chr5g0401831 | 34.109 | 129 | 74 | 2 | 33 | 161 | 37 | 154 | 7.63e-21 | 83.6 |
| Msa0339540 | MtrunA17_Chr4g0053191 | 32.075 | 159 | 93 | 2 | 1 | 155 | 1 | 148 | 1.01e-20 | 83.2 |
| Msa0339540 | MtrunA17_Chr8g0378601 | 34.615 | 130 | 71 | 2 | 2 | 131 | 20 | 135 | 7.16e-20 | 81.3 |
| Msa0339540 | MtrunA17_Chr3g0131871 | 28.986 | 138 | 82 | 4 | 9 | 144 | 7 | 130 | 1.90e-18 | 78.2 |
| Msa0339540 | MtrunA17_Chr5g0403591 | 30.000 | 120 | 71 | 1 | 40 | 159 | 63 | 169 | 3.35e-14 | 67.0 |
| Msa0339540 | MtrunA17_Chr8g0372391 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.32e-12 | 62.0 |
| Msa0339540 | MtrunA17_Chr5g0404931 | 32.143 | 112 | 60 | 3 | 9 | 119 | 20 | 116 | 6.98e-12 | 60.1 |
| Msa0339540 | MtrunA17_Chr7g0254701 | 26.207 | 145 | 93 | 2 | 9 | 153 | 15 | 145 | 1.38e-11 | 60.8 |
| Msa0339540 | MtrunA17_Chr8g0345331 | 29.412 | 136 | 66 | 6 | 1 | 127 | 1 | 115 | 3.79e-11 | 59.7 |
| Msa0339540 | MtrunA17_Chr4g0068301 | 28.205 | 156 | 81 | 6 | 1 | 148 | 7 | 139 | 4.25e-11 | 60.1 |
| Msa0339540 | MtrunA17_Chr8g0376111 | 36.000 | 100 | 55 | 4 | 31 | 127 | 66 | 159 | 4.70e-11 | 60.1 |
| Msa0339540 | MtrunA17_Chr4g0059291 | 24.051 | 158 | 103 | 5 | 10 | 164 | 6 | 149 | 6.63e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0339540 | AT5G59300.1 | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.20e-107 | 304 |
| Msa0339540 | AT3G46460.1 | 91.566 | 166 | 14 | 0 | 1 | 166 | 1 | 166 | 7.09e-106 | 300 |
| Msa0339540 | AT3G55380.1 | 87.805 | 164 | 20 | 0 | 3 | 166 | 4 | 167 | 3.27e-100 | 285 |
| Msa0339540 | AT3G55380.2 | 71.717 | 198 | 22 | 1 | 3 | 166 | 4 | 201 | 4.01e-92 | 266 |
| Msa0339540 | AT3G46460.3 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.96e-78 | 229 |
| Msa0339540 | AT3G46460.2 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.96e-78 | 229 |
| Msa0339540 | AT2G02760.1 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0339540 | AT2G02760.2 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0339540 | AT2G02760.4 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0339540 | AT2G02760.3 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.60e-33 | 115 |
| Msa0339540 | AT1G14400.1 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.64e-33 | 115 |
| Msa0339540 | AT1G14400.2 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.64e-33 | 115 |
| Msa0339540 | AT5G62540.1 | 36.420 | 162 | 89 | 2 | 1 | 162 | 1 | 148 | 1.36e-32 | 114 |
| Msa0339540 | AT3G08700.2 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 9.23e-30 | 106 |
| Msa0339540 | AT3G08700.1 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 9.23e-30 | 106 |
| Msa0339540 | AT3G08690.2 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.38e-30 | 106 |
| Msa0339540 | AT3G08690.1 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.38e-30 | 106 |
| Msa0339540 | AT1G64230.2 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.87e-29 | 105 |
| Msa0339540 | AT1G64230.1 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.87e-29 | 105 |
| Msa0339540 | AT4G27960.1 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 6.95e-29 | 104 |
| Msa0339540 | AT5G41700.5 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0339540 | AT5G41700.2 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0339540 | AT5G41700.1 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.78e-28 | 103 |
| Msa0339540 | AT5G53300.2 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0339540 | AT5G53300.4 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0339540 | AT5G53300.1 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.56e-28 | 102 |
| Msa0339540 | AT4G27960.2 | 34.161 | 161 | 92 | 2 | 1 | 161 | 28 | 174 | 5.34e-28 | 103 |
| Msa0339540 | AT5G56150.1 | 33.121 | 157 | 91 | 2 | 5 | 161 | 2 | 144 | 7.18e-27 | 99.4 |
| Msa0339540 | AT5G41700.4 | 34.177 | 158 | 89 | 3 | 5 | 161 | 2 | 145 | 2.85e-26 | 97.8 |
| Msa0339540 | AT1G64230.3 | 32.727 | 165 | 90 | 2 | 5 | 161 | 2 | 153 | 9.18e-26 | 96.7 |
| Msa0339540 | AT2G16740.1 | 31.210 | 157 | 94 | 2 | 5 | 161 | 2 | 144 | 5.52e-24 | 91.7 |
| Msa0339540 | AT1G64230.5 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.98e-23 | 91.7 |
| Msa0339540 | AT1G64230.4 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.98e-23 | 91.7 |
| Msa0339540 | AT1G50490.1 | 35.878 | 131 | 70 | 2 | 30 | 160 | 60 | 176 | 2.89e-23 | 90.9 |
| Msa0339540 | AT5G25760.1 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.97e-23 | 90.1 |
| Msa0339540 | AT5G25760.2 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.97e-23 | 90.1 |
| Msa0339540 | AT1G16890.2 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 4.04e-23 | 89.7 |
| Msa0339540 | AT1G78870.2 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 5.45e-23 | 89.4 |
| Msa0339540 | AT3G20060.1 | 34.211 | 152 | 85 | 3 | 9 | 160 | 41 | 177 | 8.62e-23 | 89.7 |
| Msa0339540 | AT3G20060.2 | 34.351 | 131 | 72 | 2 | 30 | 160 | 16 | 132 | 3.97e-22 | 86.7 |
| Msa0339540 | AT5G41700.3 | 37.607 | 117 | 59 | 2 | 5 | 121 | 2 | 104 | 2.32e-21 | 85.1 |
| Msa0339540 | AT1G16890.3 | 34.127 | 126 | 69 | 2 | 20 | 145 | 30 | 141 | 4.05e-21 | 84.7 |
| Msa0339540 | AT3G57870.1 | 34.437 | 151 | 84 | 2 | 9 | 155 | 10 | 149 | 6.45e-21 | 84.3 |
| Msa0339540 | AT1G36340.2 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.84e-21 | 84.0 |
| Msa0339540 | AT1G36340.1 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.84e-21 | 84.0 |
| Msa0339540 | AT5G53300.3 | 37.069 | 116 | 59 | 2 | 4 | 119 | 1 | 102 | 1.34e-20 | 82.0 |
| Msa0339540 | AT1G16890.1 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.77e-20 | 82.0 |
| Msa0339540 | AT1G78870.4 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.81e-20 | 82.0 |
| Msa0339540 | AT3G24515.1 | 32.143 | 168 | 97 | 3 | 2 | 161 | 4 | 162 | 3.67e-20 | 86.3 |
| Msa0339540 | AT5G56150.2 | 34.483 | 116 | 62 | 2 | 5 | 120 | 2 | 103 | 3.98e-20 | 80.9 |
| Msa0339540 | AT1G78870.1 | 33.636 | 110 | 59 | 2 | 37 | 145 | 4 | 100 | 1.10e-18 | 77.4 |
| Msa0339540 | AT3G24515.3 | 32.558 | 129 | 78 | 2 | 33 | 161 | 68 | 187 | 1.49e-17 | 79.0 |
| Msa0339540 | AT5G50870.1 | 29.710 | 138 | 81 | 4 | 9 | 144 | 7 | 130 | 2.23e-17 | 75.9 |
| Msa0339540 | AT5G50870.2 | 29.927 | 137 | 80 | 4 | 9 | 143 | 7 | 129 | 7.59e-17 | 74.7 |
| Msa0339540 | AT3G13550.1 | 31.544 | 149 | 85 | 3 | 9 | 154 | 41 | 175 | 1.13e-16 | 73.6 |
| Msa0339540 | AT1G78870.3 | 31.304 | 115 | 65 | 2 | 11 | 125 | 12 | 112 | 1.50e-16 | 71.6 |
| Msa0339540 | AT3G13550.2 | 32.787 | 122 | 68 | 2 | 9 | 130 | 41 | 148 | 2.00e-14 | 67.4 |
| Msa0339540 | AT5G05080.2 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0339540 | AT5G05080.3 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0339540 | AT5G05080.1 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0339540 | AT5G05080.4 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 4.07e-14 | 68.2 |
| Msa0339540 | AT2G18600.1 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.27e-14 | 67.0 |
| Msa0339540 | AT2G18600.2 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.27e-14 | 67.0 |
| Msa0339540 | AT4G36800.2 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.84e-14 | 66.6 |
| Msa0339540 | AT4G36800.1 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.84e-14 | 66.6 |
| Msa0339540 | AT1G45050.1 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 1.11e-12 | 62.8 |
| Msa0339540 | AT1G63800.1 | 25.974 | 154 | 98 | 4 | 10 | 161 | 6 | 145 | 1.68e-12 | 62.8 |
| Msa0339540 | AT1G75440.1 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.84e-12 | 62.0 |
| Msa0339540 | AT5G42990.1 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 2.12e-12 | 62.0 |
| Msa0339540 | AT2G46030.5 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.72e-12 | 62.0 |
| Msa0339540 | AT2G46030.1 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.72e-12 | 62.0 |
| Msa0339540 | AT2G46030.4 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.80e-12 | 62.0 |
| Msa0339540 | AT2G46030.2 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.80e-12 | 62.0 |
| Msa0339540 | AT1G63800.2 | 28.906 | 128 | 76 | 3 | 36 | 161 | 16 | 130 | 5.23e-12 | 61.2 |
| Msa0339540 | AT2G46030.3 | 27.273 | 154 | 96 | 4 | 10 | 161 | 78 | 217 | 8.29e-12 | 62.0 |
| Msa0339540 | AT5G41340.1 | 28.906 | 128 | 76 | 3 | 36 | 161 | 31 | 145 | 9.22e-12 | 60.8 |
| Msa0339540 | AT3G17000.1 | 30.769 | 130 | 60 | 6 | 11 | 131 | 18 | 126 | 1.20e-11 | 62.0 |
| Msa0339540 | AT1G17280.4 | 29.861 | 144 | 78 | 6 | 1 | 137 | 1 | 128 | 2.43e-11 | 60.5 |
| Msa0339540 | AT1G45050.2 | 34.118 | 85 | 53 | 2 | 9 | 92 | 20 | 102 | 4.77e-11 | 57.4 |
| Msa0339540 | AT5G50430.1 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 7.04e-11 | 59.3 |
| Msa0339540 | AT5G50430.2 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 7.04e-11 | 59.3 |
| Msa0339540 | AT1G17280.9 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.7 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.6 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.2 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.5 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.3 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.1 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
| Msa0339540 | AT1G17280.8 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.75e-11 | 58.9 |
Find 67 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGGAGTGTAACCATAAT+TGG | 0.137403 | 2_4:-60693347 | Msa0339540:CDS |
| AACACTTGAGCCTAAATATT+TGG | 0.152712 | 2_4:-60693746 | None:intergenic |
| CTTTGCTAAAATTTGATATT+AGG | 0.200359 | 2_4:-60689086 | Msa0339540:three_prime_UTR |
| AGTATCATATCGATGCTTTC+TGG | 0.256685 | 2_4:-60690855 | Msa0339540:CDS |
| GAGAGACGATTTCAAGAAAA+AGG | 0.291595 | 2_4:-60689422 | Msa0339540:CDS |
| GCTTATACAATATTATGATA+TGG | 0.305572 | 2_4:-60689045 | Msa0339540:three_prime_UTR |
| TGTATCTGGTGGCCCAATTA+TGG | 0.313031 | 2_4:+60693334 | None:intergenic |
| TTCACTGATGGTGGACTGTT+TGG | 0.316044 | 2_4:+60692095 | None:intergenic |
| ATAACTTACTAAAGTGTATC+TGG | 0.329098 | 2_4:+60693320 | None:intergenic |
| AGGCCATGAAAGAGTGAGTT+TGG | 0.346682 | 2_4:+60693557 | None:intergenic |
| CTTGCAAGCTCATAACCATT+TGG | 0.354028 | 2_4:+60691748 | None:intergenic |
| TTTGCCGGAGATTCATCATT+AGG | 0.355777 | 2_4:+60690831 | None:intergenic |
| ATAAATGCAACCAAATATTT+AGG | 0.361844 | 2_4:+60693736 | None:intergenic |
| ACTGCAGCTTCAACATTTGC+CGG | 0.368423 | 2_4:+60690816 | None:intergenic |
| TTTGAAGGAGGAGGCTTGCT+TGG | 0.372918 | 2_4:+60693533 | None:intergenic |
| TCTCCAAACTCACTCTTTCA+TGG | 0.373541 | 2_4:-60693560 | Msa0339540:exon |
| ATATCTATTCTTCATCCTCC+TGG | 0.379234 | 2_4:-60691778 | Msa0339540:CDS |
| CTACACAGATCAACGGTAAC+AGG | 0.379251 | 2_4:+60689290 | None:intergenic |
| TTGAAGGAGGAGGCTTGCTT+GGG | 0.393797 | 2_4:+60693534 | None:intergenic |
| CGATTTAATTCATGTCGATC+AGG | 0.399192 | 2_4:+60693694 | None:intergenic |
| TGCAGAAGGAGTGGAGAGAC+AGG | 0.411818 | 2_4:-60689444 | Msa0339540:intron |
| TGAAGTTCACTTCAGAGATA+TGG | 0.412336 | 2_4:-60692076 | Msa0339540:CDS |
| TTGCAAGCTCATAACCATTT+GGG | 0.423493 | 2_4:+60691749 | None:intergenic |
| CATAATATTGTATAAGCAAA+AGG | 0.430377 | 2_4:+60689051 | None:intergenic |
| GGCAATTATACCAGTAAAGA+AGG | 0.436226 | 2_4:+60688995 | None:intergenic |
| GATATGCAAACCCGCCCATC+AGG | 0.446681 | 2_4:+60691796 | None:intergenic |
| TATCTATTCTTCATCCTCCT+GGG | 0.449275 | 2_4:-60691777 | Msa0339540:CDS |
| AATGGAGTGTAACCATAATT+GGG | 0.465426 | 2_4:-60693346 | Msa0339540:CDS |
| GATCTGTGTAGACTTGCTAT+TGG | 0.465836 | 2_4:-60689278 | Msa0339540:three_prime_UTR |
| AAGGAGGAGGCTTGCTTGGG+AGG | 0.498537 | 2_4:+60693537 | None:intergenic |
| ATACAACTTAATGTAAGGAT+TGG | 0.511298 | 2_4:-60689317 | Msa0339540:three_prime_UTR |
| AGAACATACAACTTAATGTA+AGG | 0.513455 | 2_4:-60689322 | Msa0339540:three_prime_UTR |
| GTATTTGCAGTATATCCTGA+TGG | 0.513643 | 2_4:-60691811 | Msa0339540:intron |
| TGGTCCTAATGATGAATCTC+CGG | 0.517026 | 2_4:-60690835 | Msa0339540:CDS |
| TTGTTGTATTCTTCTCTACA+TGG | 0.521579 | 2_4:-60689219 | Msa0339540:three_prime_UTR |
| CCTCCTGGGGATGACCCAAA+TGG | 0.528218 | 2_4:-60691763 | Msa0339540:CDS |
| TATAAGCAAAAGGCAAAACT+TGG | 0.530566 | 2_4:+60689061 | None:intergenic |
| TAACCATTTGGGTCATCCCC+AGG | 0.531119 | 2_4:+60691760 | None:intergenic |
| ATGAGCTTGCAAGTGAGCGC+TGG | 0.535537 | 2_4:-60691738 | Msa0339540:CDS |
| TGCAGTATATCCTGATGGGC+GGG | 0.538018 | 2_4:-60691806 | Msa0339540:intron |
| TATTTGCAGTATATCCTGAT+GGG | 0.549933 | 2_4:-60691810 | Msa0339540:intron |
| TCAATTTCTTGTAGTGAAGG+AGG | 0.560751 | 2_4:-60692155 | Msa0339540:intron |
| CCAGCGGAAAAGCCATCGAC+GGG | 0.566293 | 2_4:+60693395 | None:intergenic |
| GAAATGTTGTGATTCACAGC+CGG | 0.566809 | 2_4:-60689373 | Msa0339540:exon |
| TTGCAGTATATCCTGATGGG+CGG | 0.572889 | 2_4:-60691807 | Msa0339540:intron |
| TGTTTATATTGCAGAAGGAG+TGG | 0.573707 | 2_4:-60689453 | Msa0339540:intron |
| CTTTGTAAACATCCCGTCGA+TGG | 0.573847 | 2_4:-60693407 | Msa0339540:CDS |
| ATCTATTCTTCATCCTCCTG+GGG | 0.574309 | 2_4:-60691776 | Msa0339540:CDS |
| AATAGCAAGATACGAGGGGC+CGG | 0.579649 | 2_4:+60689354 | None:intergenic |
| CATACAAATAATCGAAGTGT+GGG | 0.585615 | 2_4:-60693649 | Msa0339540:five_prime_UTR |
| CCGATGTGTGCGGAAGTCAC+AGG | 0.588338 | 2_4:-60689395 | Msa0339540:CDS |
| GAAGTGAACTTCACTGATGG+TGG | 0.596810 | 2_4:+60692086 | None:intergenic |
| ACCAGCGGAAAAGCCATCGA+CGG | 0.610363 | 2_4:+60693394 | None:intergenic |
| ACATACAAATAATCGAAGTG+TGG | 0.614221 | 2_4:-60693650 | Msa0339540:five_prime_UTR |
| GGACTGTTTGGATAGTTCGA+CGG | 0.629490 | 2_4:+60692107 | None:intergenic |
| GTTCGACGGAAAGCTCATGA+TGG | 0.632587 | 2_4:+60692121 | None:intergenic |
| TTCACAATAGCAAGATACGA+GGG | 0.635127 | 2_4:+60689349 | None:intergenic |
| AGCAAGTCTACACAGATCAA+CGG | 0.641649 | 2_4:+60689283 | None:intergenic |
| TCAGAGATATGGCATCCCAA+TGG | 0.645768 | 2_4:-60692065 | Msa0339540:intron |
| CCTGTGACTTCCGCACACAT+CGG | 0.655883 | 2_4:+60689395 | None:intergenic |
| TCTGAAGTGAACTTCACTGA+TGG | 0.656247 | 2_4:+60692083 | None:intergenic |
| CTTCACAATAGCAAGATACG+AGG | 0.673362 | 2_4:+60689348 | None:intergenic |
| AAAAGGTTAGCCGATGTGTG+CGG | 0.675247 | 2_4:-60689405 | Msa0339540:CDS |
| ACTTACTAAAGTGTATCTGG+TGG | 0.683504 | 2_4:+60693323 | None:intergenic |
| GGTTTCGTCGACTAAACCAG+CGG | 0.711029 | 2_4:+60693379 | None:intergenic |
| CCATTTGGGTCATCCCCAGG+AGG | 0.711844 | 2_4:+60691763 | None:intergenic |
| TCACAATAGCAAGATACGAG+GGG | 0.727949 | 2_4:+60689350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAGTTAAAAAGAAAT+TGG | - | chr2_4:60691430-60691449 | Msa0339540:intron | 10.0% |
| !! | CTTATAAAATGATCATTTAT+TGG | - | chr2_4:60689475-60689494 | Msa0339540:intron | 15.0% |
| !!! | TTTTAATTTATACTTATTGG+TGG | - | chr2_4:60689543-60689562 | Msa0339540:intron | 15.0% |
| !!! | TTTAATTTATACTTATTGGT+GGG | - | chr2_4:60689544-60689563 | Msa0339540:intron | 15.0% |
| !! | AAATATCATAATCAATAAAC+CGG | + | chr2_4:60690101-60690120 | None:intergenic | 15.0% |
| !! | TTGATTATGATATTTATTCT+AGG | - | chr2_4:60690106-60690125 | Msa0339540:intron | 15.0% |
| !! | AAATAAACGAATTGAATTTA+TGG | + | chr2_4:60691015-60691034 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAAAATTGGTCAT+CGG | + | chr2_4:60691411-60691430 | None:intergenic | 15.0% |
| !! | ATTAAATCGTTATGTTAAAA+AGG | + | chr2_4:60691604-60691623 | None:intergenic | 15.0% |
| !! | AATCATGTAAATAAGAAAAA+AGG | + | chr2_4:60691912-60691931 | None:intergenic | 15.0% |
| !!! | GTTTTACTAATAATATGTTA+TGG | - | chr2_4:60692034-60692053 | Msa0339540:intron | 15.0% |
| !! | TAATATCAATATAGTAGTTT+AGG | - | chr2_4:60692347-60692366 | Msa0339540:intron | 15.0% |
| !! | GATAAAAAGAATACAGATTA+TGG | - | chr2_4:60689694-60689713 | Msa0339540:intron | 20.0% |
| !! | TATGAATATAAGCTGAAAAA+AGG | - | chr2_4:60689934-60689953 | Msa0339540:intron | 20.0% |
| !!! | TAAGTTTTTTGAGACTATTT+GGG | + | chr2_4:60689996-60690015 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTTTGAGACTATT+TGG | + | chr2_4:60689997-60690016 | None:intergenic | 20.0% |
| !! | AAAACTTATACCAGTTTATA+AGG | - | chr2_4:60690008-60690027 | Msa0339540:intron | 20.0% |
| !!! | TTTTATTTGACCTTATAAAC+TGG | + | chr2_4:60690021-60690040 | None:intergenic | 20.0% |
| !! | AATATCATAATCAATAAACC+GGG | + | chr2_4:60690100-60690119 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGGTTTTTTTGT+TGG | - | chr2_4:60690118-60690137 | Msa0339540:intron | 20.0% |
| !! | ATTAATTTACTTCCTATGAT+TGG | - | chr2_4:60690219-60690238 | Msa0339540:intron | 20.0% |
| !! | TTATTCATAAGCAAATAAAC+AGG | + | chr2_4:60691778-60691797 | None:intergenic | 20.0% |
| !! | ACAATTATCTAGATCAATAT+CGG | + | chr2_4:60692003-60692022 | None:intergenic | 20.0% |
| !!! | AGTGTTTTACTAGTAAATAA+AGG | + | chr2_4:60692068-60692087 | None:intergenic | 20.0% |
| !! | GAGATATCTACATAAATAAT+TGG | + | chr2_4:60692124-60692143 | None:intergenic | 20.0% |
| !!! | TGGTTTTAATATTTTCTTGT+CGG | + | chr2_4:60692587-60692606 | None:intergenic | 20.0% |
| !! | TTAAGAAAGCTATAAAAAAC+AGG | + | chr2_4:60692866-60692885 | None:intergenic | 20.0% |
| !!! | CTAATATCAAATTTTAGCAA+AGG | + | chr2_4:60693610-60693629 | None:intergenic | 20.0% |
| !! | CTTTGCTAAAATTTGATATT+AGG | - | chr2_4:60693608-60693627 | Msa0339540:five_prime_UTR | 20.0% |
| !! | CATAATATTGTATAAGCAAA+AGG | + | chr2_4:60693646-60693665 | None:intergenic | 20.0% |
| !! | GCTTATACAATATTATGATA+TGG | - | chr2_4:60693649-60693668 | Msa0339540:five_prime_UTR | 20.0% |
| ! | TAAGCGATGAAATGAAAAAA+GGG | + | chr2_4:60689209-60689228 | None:intergenic | 25.0% |
| ! | ATAAGCGATGAAATGAAAAA+AGG | + | chr2_4:60689210-60689229 | None:intergenic | 25.0% |
| ! | ATAACTTACTAAAGTGTATC+TGG | + | chr2_4:60689377-60689396 | None:intergenic | 25.0% |
| !! | ATTTATTGGATTTTCTGTGA+TGG | - | chr2_4:60689489-60689508 | Msa0339540:intron | 25.0% |
| !! | TTTATTGGATTTTCTGTGAT+GGG | - | chr2_4:60689490-60689509 | Msa0339540:intron | 25.0% |
| !! | ATTGATGATATTGTTTCATG+AGG | - | chr2_4:60689628-60689647 | Msa0339540:intron | 25.0% |
| ! | GTAAAAGAAGTGATATTTGA+AGG | - | chr2_4:60689668-60689687 | Msa0339540:intron | 25.0% |
| ! | TGTAAGCTTACATAAGTTAT+AGG | - | chr2_4:60689843-60689862 | Msa0339540:intron | 25.0% |
| ! | TAGGAAGTAAATTAATGATG+AGG | + | chr2_4:60690215-60690234 | None:intergenic | 25.0% |
| ! | GATGAAGTAAATTAATGATG+AGG | + | chr2_4:60690403-60690422 | None:intergenic | 25.0% |
| ! | ATTAATTTACTTCATCCGAT+TGG | - | chr2_4:60690407-60690426 | Msa0339540:intron | 25.0% |
| !!! | GTAACATCCTATGTTTTTTA+AGG | - | chr2_4:60690734-60690753 | Msa0339540:intron | 25.0% |
| ! | TGTTGTTCCTTAAAAAACAT+AGG | + | chr2_4:60690744-60690763 | None:intergenic | 25.0% |
| ! | GACATTTCTTTGATTAAAAC+AGG | - | chr2_4:60690837-60690856 | Msa0339540:CDS | 25.0% |
| ! | CATTATTCAATTGATATTGC+TGG | - | chr2_4:60691057-60691076 | Msa0339540:intron | 25.0% |
| ! | TAGATGCAAAATACTTGTAA+AGG | - | chr2_4:60691194-60691213 | Msa0339540:intron | 25.0% |
| ! | TAACACTTAAATTAGCTGTA+AGG | + | chr2_4:60691628-60691647 | None:intergenic | 25.0% |
| ! | TAAGTATAAAAAGAGAAGTG+TGG | + | chr2_4:60691953-60691972 | None:intergenic | 25.0% |
| ! | CTAATAATATGTTATGGACT+TGG | - | chr2_4:60692040-60692059 | Msa0339540:intron | 25.0% |
| !!! | TGATACGTTGATAATAACTA+CGG | - | chr2_4:60692176-60692195 | Msa0339540:intron | 25.0% |
| ! | CTACTAGTAGTTATTATCAA+CGG | - | chr2_4:60692810-60692829 | Msa0339540:intron | 25.0% |
| ! | AAAAACAGGCAAAAGATATT+AGG | + | chr2_4:60692852-60692871 | None:intergenic | 25.0% |
| ! | ATGTGTAGTATTAGGAATTT+AGG | - | chr2_4:60692971-60692990 | Msa0339540:intron | 25.0% |
| ! | AGAACATACAACTTAATGTA+AGG | - | chr2_4:60693372-60693391 | Msa0339540:CDS | 25.0% |
| ! | ATACAACTTAATGTAAGGAT+TGG | - | chr2_4:60693377-60693396 | Msa0339540:CDS | 25.0% |
| !! | AAATGTATTCTACGTGTTTT+TGG | - | chr2_4:60693528-60693547 | Msa0339540:CDS | 25.0% |
| ! | AAATAATATGCCAGCAAAAA+TGG | + | chr2_4:60693723-60693742 | None:intergenic | 25.0% |
| ACATACAAATAATCGAAGTG+TGG | - | chr2_4:60689044-60689063 | Msa0339540:three_prime_UTR | 30.0% | |
| CATACAAATAATCGAAGTGT+GGG | - | chr2_4:60689045-60689064 | Msa0339540:three_prime_UTR | 30.0% | |
| GTAAGGTTAATCAGAAATAG+CGG | + | chr2_4:60689253-60689272 | None:intergenic | 30.0% | |
| AAGATCTGTGAGAAAAAGTA+AGG | + | chr2_4:60689270-60689289 | None:intergenic | 30.0% | |
| ! | ACGAAACCAACATTTTTGAA+TGG | - | chr2_4:60689330-60689349 | Msa0339540:three_prime_UTR | 30.0% |
| TACACTCCATTCAAAAATGT+TGG | + | chr2_4:60689339-60689358 | None:intergenic | 30.0% | |
| AATGGAGTGTAACCATAATT+GGG | - | chr2_4:60689348-60689367 | Msa0339540:three_prime_UTR | 30.0% | |
| ! | TTATTGGATTTTCTGTGATG+GGG | - | chr2_4:60689491-60689510 | Msa0339540:intron | 30.0% |
| !! | TTTTCAGAGTTTGGTTCAAT+TGG | - | chr2_4:60689567-60689586 | Msa0339540:intron | 30.0% |
| ATAAGTTGTTTATCCGAACA+GGG | + | chr2_4:60689720-60689739 | None:intergenic | 30.0% | |
| TATAAGTTGTTTATCCGAAC+AGG | + | chr2_4:60689721-60689740 | None:intergenic | 30.0% | |
| !! | AAAGTTTTGATAAGCTATCC+TGG | - | chr2_4:60689905-60689924 | Msa0339540:intron | 30.0% |
| CTTATATTCATAACTTCTCC+AGG | + | chr2_4:60689926-60689945 | None:intergenic | 30.0% | |
| TGCAAATTATTATGCTTTCC+CGG | - | chr2_4:60690079-60690098 | Msa0339540:intron | 30.0% | |
| TTGGTTTCATTTATTTGCAC+TGG | - | chr2_4:60690137-60690156 | Msa0339540:intron | 30.0% | |
| TTTACTTCCTATGATTGGAT+TGG | - | chr2_4:60690224-60690243 | Msa0339540:intron | 30.0% | |
| AAACAAATAAGCTGAGTAGT+TGG | + | chr2_4:60690321-60690340 | None:intergenic | 30.0% | |
| AATTCCAAAACCAATCCAAT+CGG | + | chr2_4:60690425-60690444 | None:intergenic | 30.0% | |
| ! | CTACAAGAAATTGAAAGCAT+TGG | + | chr2_4:60690533-60690552 | None:intergenic | 30.0% |
| CTTTCAATTTCTTGTAGTGA+AGG | - | chr2_4:60690536-60690555 | Msa0339540:intron | 30.0% | |
| TATTTGCAGTATATCCTGAT+GGG | - | chr2_4:60690884-60690903 | Msa0339540:intron | 30.0% | |
| GAGCATGCTTGTATTTAATA+GGG | - | chr2_4:60691135-60691154 | Msa0339540:intron | 30.0% | |
| GTGATCATAACAAAAGTTGT+GGG | - | chr2_4:60691291-60691310 | Msa0339540:intron | 30.0% | |
| !! | AGATACTCTAAAATGAGTGA+TGG | + | chr2_4:60691501-60691520 | None:intergenic | 30.0% |
| !!! | ATCACTCATTTTAGAGTATC+TGG | - | chr2_4:60691500-60691519 | Msa0339540:intron | 30.0% |
| TTAAACAACAAGTCTATAGC+AGG | + | chr2_4:60691570-60691589 | None:intergenic | 30.0% | |
| ATAACTTTACTGAATGTCCT+TGG | - | chr2_4:60691683-60691702 | Msa0339540:intron | 30.0% | |
| TAACTTTACTGAATGTCCTT+GGG | - | chr2_4:60691684-60691703 | Msa0339540:intron | 30.0% | |
| TGATCTAGATAATTGTGCAA+AGG | - | chr2_4:60692007-60692026 | Msa0339540:intron | 30.0% | |
| ATAATGAGTAGATACGAAAG+TGG | - | chr2_4:60692262-60692281 | Msa0339540:intron | 30.0% | |
| TAATGAGTAGATACGAAAGT+GGG | - | chr2_4:60692263-60692282 | Msa0339540:intron | 30.0% | |
| TAGTTTAGGCATTACTCTTT+AGG | - | chr2_4:60692361-60692380 | Msa0339540:intron | 30.0% | |
| !!! | TATGAGAATGCTTTTTCTCT+TGG | - | chr2_4:60692434-60692453 | Msa0339540:intron | 30.0% |
| ! | ATTCAAAGTATTCAAGACGT+GGG | + | chr2_4:60692627-60692646 | None:intergenic | 30.0% |
| ! | TATTCAAAGTATTCAAGACG+TGG | + | chr2_4:60692628-60692647 | None:intergenic | 30.0% |
| GTGTTAAACTAGTAACTACT+AGG | - | chr2_4:60692741-60692760 | Msa0339540:intron | 30.0% | |
| !!! | CTCTGTTTTAAGATTCCTTT+CGG | - | chr2_4:60692913-60692932 | Msa0339540:intron | 30.0% |
| !!! | GTTGAACAAACAGCTTTTTT+CGG | + | chr2_4:60693036-60693055 | None:intergenic | 30.0% |
| TGCTATACACTGTATCAATT+AGG | + | chr2_4:60693165-60693184 | None:intergenic | 30.0% | |
| !! | GACAGTTTGGAATATTGTTT+TGG | - | chr2_4:60693195-60693214 | Msa0339540:intron | 30.0% |
| TGTGATGTTTATATTGCAGA+AGG | - | chr2_4:60693236-60693255 | Msa0339540:intron | 30.0% | |
| TTGTTGTATTCTTCTCTACA+TGG | - | chr2_4:60693475-60693494 | Msa0339540:intron | 30.0% | |
| TATAAGCAAAAGGCAAAACT+TGG | + | chr2_4:60693636-60693655 | None:intergenic | 30.0% | |
| ! | TATCATTTTGCCTTCTTTAC+TGG | - | chr2_4:60693689-60693708 | Msa0339540:five_prime_UTR | 30.0% |
| CGATTTAATTCATGTCGATC+AGG | + | chr2_4:60689003-60689022 | None:intergenic | 35.0% | |
| !!! | TACCTTTGAGCTGTTTTTGA+AGG | + | chr2_4:60689179-60689198 | None:intergenic | 35.0% |
| GAATGGAGTGTAACCATAAT+TGG | - | chr2_4:60689347-60689366 | Msa0339540:three_prime_UTR | 35.0% | |
| ACTTACTAAAGTGTATCTGG+TGG | + | chr2_4:60689374-60689393 | None:intergenic | 35.0% | |
| ! | TATTGGATTTTCTGTGATGG+GGG | - | chr2_4:60689492-60689511 | Msa0339540:intron | 35.0% |
| ! | ACTGGATTTTCATTAGCTGT+AGG | - | chr2_4:60690155-60690174 | Msa0339540:intron | 35.0% |
| !!! | TCCTATGATTGGATTGGTTT+TGG | - | chr2_4:60690230-60690249 | Msa0339540:intron | 35.0% |
| TCCAAAACCAATCCAATCAT+AGG | + | chr2_4:60690234-60690253 | None:intergenic | 35.0% | |
| TTTACTTCATCCGATTGGAT+TGG | - | chr2_4:60690412-60690431 | Msa0339540:intron | 35.0% | |
| TCAATTTCTTGTAGTGAAGG+AGG | - | chr2_4:60690539-60690558 | Msa0339540:intron | 35.0% | |
| TGAAGTTCACTTCAGAGATA+TGG | - | chr2_4:60690618-60690637 | Msa0339540:intron | 35.0% | |
| ATAGGATGTTACTGCAATAC+GGG | + | chr2_4:60690726-60690745 | None:intergenic | 35.0% | |
| CATAGGATGTTACTGCAATA+CGG | + | chr2_4:60690727-60690746 | None:intergenic | 35.0% | |
| TGAGAAAATCCAATGATGCA+CGG | + | chr2_4:60690812-60690831 | None:intergenic | 35.0% | |
| GTATTTGCAGTATATCCTGA+TGG | - | chr2_4:60690883-60690902 | Msa0339540:intron | 35.0% | |
| ATATCTATTCTTCATCCTCC+TGG | - | chr2_4:60690916-60690935 | Msa0339540:intron | 35.0% | |
| TATCTATTCTTCATCCTCCT+GGG | - | chr2_4:60690917-60690936 | Msa0339540:intron | 35.0% | |
| TTGCAAGCTCATAACCATTT+GGG | + | chr2_4:60690948-60690967 | None:intergenic | 35.0% | |
| ! | TTTTCACGTACTGTATGAAC+AGG | + | chr2_4:60690985-60691004 | None:intergenic | 35.0% |
| CGAGCATGCTTGTATTTAAT+AGG | - | chr2_4:60691134-60691153 | Msa0339540:intron | 35.0% | |
| CGTGATCATAACAAAAGTTG+TGG | - | chr2_4:60691290-60691309 | Msa0339540:intron | 35.0% | |
| !! | ACTCTAAAATGAGTGATGGT+CGG | + | chr2_4:60691497-60691516 | None:intergenic | 35.0% |
| CTATAGCAGGTAAACATTAC+AGG | + | chr2_4:60691557-60691576 | None:intergenic | 35.0% | |
| !! | TAGACTTGTTGTTTAAGACC+TGG | - | chr2_4:60691574-60691593 | Msa0339540:intron | 35.0% |
| TTATGTTAAAAAGGCAAGCC+AGG | + | chr2_4:60691595-60691614 | None:intergenic | 35.0% | |
| CAAGTATGTCAAAACACTCA+TGG | + | chr2_4:60691734-60691753 | None:intergenic | 35.0% | |
| AGTATCATATCGATGCTTTC+TGG | - | chr2_4:60691839-60691858 | Msa0339540:intron | 35.0% | |
| CTAGTAAAACACTATGTCCT+TGG | - | chr2_4:60692075-60692094 | Msa0339540:CDS | 35.0% | |
| TGTAGCATTAAAGCAATCCA+AGG | + | chr2_4:60692095-60692114 | None:intergenic | 35.0% | |
| TCGCTCATAAAACTCAAACT+TGG | + | chr2_4:60692305-60692324 | None:intergenic | 35.0% | |
| !!! | GTGTCGAGTGTTTTTTTGAA+GGG | + | chr2_4:60692522-60692541 | None:intergenic | 35.0% |
| ! | TTTTCTTGTCGGACTAAGTT+GGG | + | chr2_4:60692576-60692595 | None:intergenic | 35.0% |
| ! | ATTTTCTTGTCGGACTAAGT+TGG | + | chr2_4:60692577-60692596 | None:intergenic | 35.0% |
| ATGTCCATACTGATAATACG+TGG | - | chr2_4:60692765-60692784 | Msa0339540:intron | 35.0% | |
| CATTCCACGTATTATCAGTA+TGG | + | chr2_4:60692772-60692791 | None:intergenic | 35.0% | |
| CGAAAGGAATCTTAAAACAG+AGG | + | chr2_4:60692915-60692934 | None:intergenic | 35.0% | |
| TATTGAGATCCCTACACTTA+AGG | - | chr2_4:60692947-60692966 | Msa0339540:intron | 35.0% | |
| ATTGAGATCCCTACACTTAA+GGG | - | chr2_4:60692948-60692967 | Msa0339540:intron | 35.0% | |
| CTTAAGGGATGTGTAGTATT+AGG | - | chr2_4:60692963-60692982 | Msa0339540:intron | 35.0% | |
| CAACACTAATGGTGACAATT+GGG | + | chr2_4:60692999-60693018 | None:intergenic | 35.0% | |
| ACAACACTAATGGTGACAAT+TGG | + | chr2_4:60693000-60693019 | None:intergenic | 35.0% | |
| ACCATTAGTGTTGTCAATTG+TGG | - | chr2_4:60693006-60693025 | Msa0339540:intron | 35.0% | |
| TCCACAATTGACAACACTAA+TGG | + | chr2_4:60693010-60693029 | None:intergenic | 35.0% | |
| !!! | TGTGTCATTTTGAGTACTGA+AGG | - | chr2_4:60693063-60693082 | Msa0339540:intron | 35.0% |
| !!! | AATGTGTACTTTTAGGACAG+AGG | + | chr2_4:60693128-60693147 | None:intergenic | 35.0% |
| ! | CAACAGCAATGTGTACTTTT+AGG | + | chr2_4:60693135-60693154 | None:intergenic | 35.0% |
| CTGCAATATAAACATCACAC+AGG | + | chr2_4:60693235-60693254 | None:intergenic | 35.0% | |
| TGTTTATATTGCAGAAGGAG+TGG | - | chr2_4:60693241-60693260 | Msa0339540:intron | 35.0% | |
| GAGAGACGATTTCAAGAAAA+AGG | - | chr2_4:60693272-60693291 | Msa0339540:intron | 35.0% | |
| TTCACAATAGCAAGATACGA+GGG | + | chr2_4:60693348-60693367 | None:intergenic | 35.0% | |
| !!! | GTGTTTTTGGCTAGTGTTTT+GGG | - | chr2_4:60693541-60693560 | Msa0339540:CDS | 35.0% |
| !!! | TGTTTTTGGCTAGTGTTTTG+GGG | - | chr2_4:60693542-60693561 | Msa0339540:CDS | 35.0% |
| GGCAATTATACCAGTAAAGA+AGG | + | chr2_4:60693702-60693721 | None:intergenic | 35.0% | |
| !!! | GGTATAATTGCCATTTTTGC+TGG | - | chr2_4:60693710-60693729 | Msa0339540:five_prime_UTR | 35.0% |
| TCTCCAAACTCACTCTTTCA+TGG | - | chr2_4:60689134-60689153 | Msa0339540:three_prime_UTR | 40.0% | |
| !!! | CTTTGAGCTGTTTTTGAAGG+AGG | + | chr2_4:60689176-60689195 | None:intergenic | 40.0% |
| CTCCTTCAAAAACAGCTCAA+AGG | - | chr2_4:60689174-60689193 | Msa0339540:three_prime_UTR | 40.0% | |
| !! | ATTTTCTGTGATGGGGGTTT+TGG | - | chr2_4:60689498-60689517 | Msa0339540:intron | 40.0% |
| !!! | ATTGGTGGGTTTTCAGAGTT+TGG | - | chr2_4:60689558-60689577 | Msa0339540:intron | 40.0% |
| ! | CAGAGTTTGGTTCAATTGGT+TGG | - | chr2_4:60689571-60689590 | Msa0339540:intron | 40.0% |
| ATACAGATTATGGCCCTGTT+CGG | - | chr2_4:60689704-60689723 | Msa0339540:intron | 40.0% | |
| CTCAGCTTATTTGTTTGCAC+TGG | - | chr2_4:60690325-60690344 | Msa0339540:intron | 40.0% | |
| ! | ACTGGATTTTCCTTAGCTGT+AGG | - | chr2_4:60690343-60690362 | Msa0339540:intron | 40.0% |
| ACAAGCAAATCCTACAGCTA+AGG | + | chr2_4:60690356-60690375 | None:intergenic | 40.0% | |
| !!! | TCATCCGATTGGATTGGTTT+TGG | - | chr2_4:60690418-60690437 | Msa0339540:intron | 40.0% |
| TGGCAAACAAATAAGCTGAG+TGG | + | chr2_4:60690513-60690532 | None:intergenic | 40.0% | |
| ! | TCTGAAGTGAACTTCACTGA+TGG | + | chr2_4:60690614-60690633 | None:intergenic | 40.0% |
| CAGAGAGAAAACCAACCATT+GGG | + | chr2_4:60690647-60690666 | None:intergenic | 40.0% | |
| TCAGAGAGAAAACCAACCAT+TGG | + | chr2_4:60690648-60690667 | None:intergenic | 40.0% | |
| ATCTATTCTTCATCCTCCTG+GGG | - | chr2_4:60690918-60690937 | Msa0339540:intron | 40.0% | |
| CTTGCAAGCTCATAACCATT+TGG | + | chr2_4:60690949-60690968 | None:intergenic | 40.0% | |
| !! | TGGGCTTTTCTTTGTTTACG+AGG | - | chr2_4:60691310-60691329 | Msa0339540:intron | 40.0% |
| !! | GGGCTTTTCTTTGTTTACGA+GGG | - | chr2_4:60691311-60691330 | Msa0339540:intron | 40.0% |
| AAATTGGTCATCGGATACGT+TGG | + | chr2_4:60691402-60691421 | None:intergenic | 40.0% | |
| TGAGATATGCATCGTATCCT+AGG | - | chr2_4:60691460-60691479 | Msa0339540:intron | 40.0% | |
| TACTGAATGTCCTTGGGATA+TGG | - | chr2_4:60691690-60691709 | Msa0339540:intron | 40.0% | |
| GTATGTCAAAACACTCATGG+TGG | + | chr2_4:60691731-60691750 | None:intergenic | 40.0% | |
| TGGTCCTAATGATGAATCTC+CGG | - | chr2_4:60691859-60691878 | Msa0339540:intron | 40.0% | |
| TTTGCCGGAGATTCATCATT+AGG | + | chr2_4:60691866-60691885 | None:intergenic | 40.0% | |
| ! | AAAGAGAAGTGTGGTGAAGA+TGG | + | chr2_4:60691944-60691963 | None:intergenic | 40.0% |
| TTTGCGTCCTAGAGAAGTAA+AGG | - | chr2_4:60691973-60691992 | Msa0339540:intron | 40.0% | |
| !!! | TGCTTTTTCTCTTGGCATGT+TGG | - | chr2_4:60692442-60692461 | Msa0339540:intron | 40.0% |
| !!! | TGTTTTTTTGAAGGGTGGGA+GGG | + | chr2_4:60692514-60692533 | None:intergenic | 40.0% |
| !!! | CGAGTGTTTTTTTGAAGGGT+GGG | + | chr2_4:60692518-60692537 | None:intergenic | 40.0% |
| !!! | TCGAGTGTTTTTTTGAAGGG+TGG | + | chr2_4:60692519-60692538 | None:intergenic | 40.0% |
| !!! | GGTGTCGAGTGTTTTTTTGA+AGG | + | chr2_4:60692523-60692542 | None:intergenic | 40.0% |
| ! | GATTTTCATCCCTGAACTTG+TGG | + | chr2_4:60692554-60692573 | None:intergenic | 40.0% |
| ! | AGTATTCAAGACGTGGGTTA+GGG | + | chr2_4:60692621-60692640 | None:intergenic | 40.0% |
| AAGTATTCAAGACGTGGGTT+AGG | + | chr2_4:60692622-60692641 | None:intergenic | 40.0% | |
| GTGGAATGTCTTGTATGCAA+AGG | - | chr2_4:60692784-60692803 | Msa0339540:intron | 40.0% | |
| !!! | TTTTAAGATTCCTTTCGGCC+AGG | - | chr2_4:60692918-60692937 | Msa0339540:intron | 40.0% |
| CTACACATCCCTTAAGTGTA+GGG | + | chr2_4:60692959-60692978 | None:intergenic | 40.0% | |
| ACTACACATCCCTTAAGTGT+AGG | + | chr2_4:60692960-60692979 | None:intergenic | 40.0% | |
| GCACTTCAATCTTGACAGTT+TGG | - | chr2_4:60693182-60693201 | Msa0339540:intron | 40.0% | |
| GAAATGTTGTGATTCACAGC+CGG | - | chr2_4:60693321-60693340 | Msa0339540:intron | 40.0% | |
| TCACAATAGCAAGATACGAG+GGG | + | chr2_4:60693347-60693366 | None:intergenic | 40.0% | |
| CTTCACAATAGCAAGATACG+AGG | + | chr2_4:60693349-60693368 | None:intergenic | 40.0% | |
| AGCAAGTCTACACAGATCAA+CGG | + | chr2_4:60693414-60693433 | None:intergenic | 40.0% | |
| !! | GATCTGTGTAGACTTGCTAT+TGG | - | chr2_4:60693416-60693435 | Msa0339540:intron | 40.0% |
| !!! | CGTGTTTTTGGCTAGTGTTT+TGG | - | chr2_4:60693540-60693559 | Msa0339540:CDS | 40.0% |
| !!! | GTTTTTGGCTAGTGTTTTGG+GGG | - | chr2_4:60693543-60693562 | Msa0339540:CDS | 40.0% |
| ! | TTGGGGGACTAGTAGTTTAT+TGG | - | chr2_4:60693559-60693578 | Msa0339540:exon | 40.0% |
| AGGCCATGAAAGAGTGAGTT+TGG | + | chr2_4:60689140-60689159 | None:intergenic | 45.0% | |
| !!! | TGAGCTGTTTTTGAAGGAGG+AGG | + | chr2_4:60689173-60689192 | None:intergenic | 45.0% |
| CTTTGTAAACATCCCGTCGA+TGG | - | chr2_4:60689287-60689306 | Msa0339540:three_prime_UTR | 45.0% | |
| TGTATCTGGTGGCCCAATTA+TGG | + | chr2_4:60689363-60689382 | None:intergenic | 45.0% | |
| GCTGAGTAGTTGGTCAAACT+CGG | + | chr2_4:60690311-60690330 | None:intergenic | 45.0% | |
| ! | CTGAGTGGTTAGTCAAACTC+AGG | + | chr2_4:60690498-60690517 | None:intergenic | 45.0% |
| GGACTGTTTGGATAGTTCGA+CGG | + | chr2_4:60690590-60690609 | None:intergenic | 45.0% | |
| !! | TTCACTGATGGTGGACTGTT+TGG | + | chr2_4:60690602-60690621 | None:intergenic | 45.0% |
| GAAGTGAACTTCACTGATGG+TGG | + | chr2_4:60690611-60690630 | None:intergenic | 45.0% | |
| TCAGAGATATGGCATCCCAA+TGG | - | chr2_4:60690629-60690648 | Msa0339540:intron | 45.0% | |
| AGATATGGCATCCCAATGGT+TGG | - | chr2_4:60690633-60690652 | Msa0339540:intron | 45.0% | |
| ! | GTTCCCGATACGTTTTGCAT+CGG | - | chr2_4:60690771-60690790 | Msa0339540:intron | 45.0% |
| CATCCGATGCAAAACGTATC+GGG | + | chr2_4:60690777-60690796 | None:intergenic | 45.0% | |
| GCATCCGATGCAAAACGTAT+CGG | + | chr2_4:60690778-60690797 | None:intergenic | 45.0% | |
| ! | GTAACTTGTCCGTGCATCAT+TGG | - | chr2_4:60690800-60690819 | Msa0339540:intron | 45.0% |
| TTGCAGTATATCCTGATGGG+CGG | - | chr2_4:60690887-60690906 | Msa0339540:intron | 45.0% | |
| GATACGTTGGAGATGCATCA+CGG | + | chr2_4:60691389-60691408 | None:intergenic | 45.0% | |
| CGCTAGAGTAGAAGCTTTCT+CGG | - | chr2_4:60691524-60691543 | Msa0339540:intron | 45.0% | |
| GCTAGAGTAGAAGCTTTCTC+GGG | - | chr2_4:60691525-60691544 | Msa0339540:intron | 45.0% | |
| AAGTGGCATACCATATCCCA+AGG | + | chr2_4:60691703-60691722 | None:intergenic | 45.0% | |
| ACTGCAGCTTCAACATTTGC+CGG | + | chr2_4:60691881-60691900 | None:intergenic | 45.0% | |
| CGGTTTGCCTTTACTTCTCT+AGG | + | chr2_4:60691983-60692002 | None:intergenic | 45.0% | |
| ! | TTTTCTCTTGGCATGTTGGC+AGG | - | chr2_4:60692446-60692465 | Msa0339540:intron | 45.0% |
| !!! | GTGTTTTTTTGAAGGGTGGG+AGG | + | chr2_4:60692515-60692534 | None:intergenic | 45.0% |
| ! | AAAAGGTTAGCCGATGTGTG+CGG | - | chr2_4:60693289-60693308 | Msa0339540:intron | 45.0% |
| CTACACAGATCAACGGTAAC+AGG | + | chr2_4:60693407-60693426 | None:intergenic | 45.0% | |
| !! | ATTTATGAAAAATTAAAAAA+GGG | + | chr2_4:60689421-60689440 | None:intergenic | 5.0% |
| !! | AATTTATGAAAAATTAAAAA+AGG | + | chr2_4:60689422-60689441 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTTATACTTAT+TGG | - | chr2_4:60689540-60689559 | Msa0339540:intron | 5.0% |
| !!! | CTTATTAATTTTAAAAAAAT+TGG | + | chr2_4:60691418-60691437 | None:intergenic | 5.0% |
| ! | TTGAAGGAGGAGGCTTGCTT+GGG | + | chr2_4:60689163-60689182 | None:intergenic | 50.0% |
| ! | TTTGAAGGAGGAGGCTTGCT+TGG | + | chr2_4:60689164-60689183 | None:intergenic | 50.0% |
| ! | GGTTTCGTCGACTAAACCAG+CGG | + | chr2_4:60689318-60689337 | None:intergenic | 50.0% |
| GTTCGACGGAAAGCTCATGA+TGG | + | chr2_4:60690576-60690595 | None:intergenic | 50.0% | |
| ! | TGCAGTATATCCTGATGGGC+GGG | - | chr2_4:60690888-60690907 | Msa0339540:intron | 50.0% |
| TAACCATTTGGGTCATCCCC+AGG | + | chr2_4:60690937-60690956 | None:intergenic | 50.0% | |
| GGTCGGATACTGATACTCCT+AGG | + | chr2_4:60691480-60691499 | None:intergenic | 50.0% | |
| !! | CACTCATGGTGGACAAGAAG+TGG | + | chr2_4:60691720-60691739 | None:intergenic | 50.0% |
| TTCCACGTATGCTCTCTTGC+AGG | - | chr2_4:60691799-60691818 | Msa0339540:CDS | 50.0% | |
| ! | TACCTGCAAGAGAGCATACG+TGG | + | chr2_4:60691804-60691823 | None:intergenic | 50.0% |
| ATGTTGGCAGGCTTGGCAAT+GGG | - | chr2_4:60692458-60692477 | Msa0339540:intron | 50.0% | |
| TTCATCCCTGAACTTGTGGC+AGG | + | chr2_4:60692550-60692569 | None:intergenic | 50.0% | |
| AATAGACATGCCTGGCCGAA+AGG | + | chr2_4:60692931-60692950 | None:intergenic | 50.0% | |
| GGGATCTCAATAGACATGCC+TGG | + | chr2_4:60692939-60692958 | None:intergenic | 50.0% | |
| AATAGCAAGATACGAGGGGC+CGG | + | chr2_4:60693343-60693362 | None:intergenic | 50.0% | |
| ACCAGCGGAAAAGCCATCGA+CGG | + | chr2_4:60689303-60689322 | None:intergenic | 55.0% | |
| GATATGCAAACCCGCCCATC+AGG | + | chr2_4:60690901-60690920 | None:intergenic | 55.0% | |
| ATGAGCTTGCAAGTGAGCGC+TGG | - | chr2_4:60690956-60690975 | Msa0339540:intron | 55.0% | |
| TCTTGGCATGTTGGCAGGCT+TGG | - | chr2_4:60692451-60692470 | Msa0339540:intron | 55.0% | |
| CATGTTGGCAGGCTTGGCAA+TGG | - | chr2_4:60692457-60692476 | Msa0339540:intron | 55.0% | |
| TGTTGGCAGGCTTGGCAATG+GGG | - | chr2_4:60692459-60692478 | Msa0339540:intron | 55.0% | |
| CCTGAACTTGTGGCAGGAAG+GGG | + | chr2_4:60692544-60692563 | None:intergenic | 55.0% | |
| CCCTGAACTTGTGGCAGGAA+GGG | + | chr2_4:60692545-60692564 | None:intergenic | 55.0% | |
| CCCTTCCTGCCACAAGTTCA+GGG | - | chr2_4:60692542-60692561 | Msa0339540:intron | 55.0% | |
| TCCCTGAACTTGTGGCAGGA+AGG | + | chr2_4:60692546-60692565 | None:intergenic | 55.0% | |
| TGCAGAAGGAGTGGAGAGAC+AGG | - | chr2_4:60693250-60693269 | Msa0339540:intron | 55.0% | |
| CCTGTGACTTCCGCACACAT+CGG | + | chr2_4:60693302-60693321 | None:intergenic | 55.0% | |
| ! | AAGGAGGAGGCTTGCTTGGG+AGG | + | chr2_4:60689160-60689179 | None:intergenic | 60.0% |
| CCAGCGGAAAAGCCATCGAC+GGG | + | chr2_4:60689302-60689321 | None:intergenic | 60.0% | |
| CCATTTGGGTCATCCCCAGG+AGG | + | chr2_4:60690934-60690953 | None:intergenic | 60.0% | |
| CCTCCTGGGGATGACCCAAA+TGG | - | chr2_4:60690931-60690950 | Msa0339540:intron | 60.0% | |
| GGCGTGTCGAGAATGAGACG+TGG | - | chr2_4:60692197-60692216 | Msa0339540:intron | 60.0% | |
| GCTTGGCAATGGGGCAGGTA+GGG | - | chr2_4:60692468-60692487 | Msa0339540:intron | 60.0% | |
| CCCCTTCCTGCCACAAGTTC+AGG | - | chr2_4:60692541-60692560 | Msa0339540:intron | 60.0% | |
| !! | GACGTGGGTTAGGGTGAGCA+GGG | + | chr2_4:60692612-60692631 | None:intergenic | 60.0% |
| !! | AGACGTGGGTTAGGGTGAGC+AGG | + | chr2_4:60692613-60692632 | None:intergenic | 60.0% |
| CCGATGTGTGCGGAAGTCAC+AGG | - | chr2_4:60693299-60693318 | Msa0339540:intron | 60.0% | |
| ! | CCCGTCGATGGCTTTTCCGC+TGG | - | chr2_4:60689299-60689318 | Msa0339540:three_prime_UTR | 65.0% |
| GGCTTGGCAATGGGGCAGGT+AGG | - | chr2_4:60692467-60692486 | Msa0339540:intron | 65.0% | |
| GGCAATGGGGCAGGTAGGGA+CGG | - | chr2_4:60692472-60692491 | Msa0339540:intron | 65.0% | |
| GCAATGGGGCAGGTAGGGAC+GGG | - | chr2_4:60692473-60692492 | Msa0339540:intron | 65.0% | |
| GGGTTAGGGTGAGCAGGGTG+TGG | + | chr2_4:60692607-60692626 | None:intergenic | 65.0% | |
| GGCAGGCTTGGCAATGGGGC+AGG | - | chr2_4:60692463-60692482 | Msa0339540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 60688960 | 60693756 | 60688960 | ID=Msa0339540;Name=Msa0339540 |
| chr2_4 | mRNA | 60688960 | 60693756 | 60688960 | ID=Msa0339540-mRNA-1;Parent=Msa0339540;Name=Msa0339540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=193|1|1|1|1|1|6|424|166 |
| chr2_4 | exon | 60688960 | 60689461 | 60688960 | ID=Msa0339540-mRNA-1:exon:18935;Parent=Msa0339540-mRNA-1 |
| chr2_4 | exon | 60690818 | 60690895 | 60690818 | ID=Msa0339540-mRNA-1:exon:18934;Parent=Msa0339540-mRNA-1 |
| chr2_4 | exon | 60691723 | 60691823 | 60691723 | ID=Msa0339540-mRNA-1:exon:18933;Parent=Msa0339540-mRNA-1 |
| chr2_4 | exon | 60692066 | 60692163 | 60692066 | ID=Msa0339540-mRNA-1:exon:18932;Parent=Msa0339540-mRNA-1 |
| chr2_4 | exon | 60693329 | 60693431 | 60693329 | ID=Msa0339540-mRNA-1:exon:18931;Parent=Msa0339540-mRNA-1 |
| chr2_4 | exon | 60693521 | 60693756 | 60693521 | ID=Msa0339540-mRNA-1:exon:18930;Parent=Msa0339540-mRNA-1 |
| chr2_4 | five_prime_UTR | 60693564 | 60693756 | 60693564 | ID=Msa0339540-mRNA-1:five_prime_utr;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60693521 | 60693563 | 60693521 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60693329 | 60693431 | 60693329 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60692066 | 60692163 | 60692066 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60691723 | 60691823 | 60691723 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60690818 | 60690895 | 60690818 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | CDS | 60689384 | 60689461 | 60689384 | ID=Msa0339540-mRNA-1:cds;Parent=Msa0339540-mRNA-1 |
| chr2_4 | three_prime_UTR | 60688960 | 60689383 | 60688960 | ID=Msa0339540-mRNA-1:three_prime_utr;Parent=Msa0339540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
