AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0884840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0884840 MtrunA17_Chr6g0465161 95.385 585 13 1 33 603 126 710 0.0 1124
Msa0884840 MtrunA17_Chr4g0012061 40.705 511 258 7 33 509 149 648 6.17e-129 395
Msa0884840 MtrunA17_Chr1g0169361 36.926 631 307 14 35 603 183 784 3.20e-126 390
Msa0884840 MtrunA17_Chr7g0230671 40.076 524 260 6 12 503 125 626 1.38e-124 383
Msa0884840 MtrunA17_Chr3g0136721 37.500 488 259 7 35 477 134 620 7.25e-103 327
Msa0884840 MtrunA17_Chr1g0148121 37.143 455 255 4 35 460 130 582 9.09e-101 320
Msa0884840 MtrunA17_Chr1g0199921 35.238 420 234 4 39 421 203 621 2.34e-77 262
Msa0884840 MtrunA17_Chr3g0120791 34.574 376 219 5 36 385 201 575 3.09e-63 221
Msa0884840 MtrunA17_Chr8g0382921 32.117 411 222 7 30 385 189 597 8.86e-62 218
Msa0884840 MtrunA17_Chr3g0129101 32.847 411 219 9 30 385 198 606 4.57e-61 216
Msa0884840 MtrunA17_Chr4g0057941 27.366 391 231 10 45 395 77 454 6.33e-34 135
Msa0884840 MtrunA17_Chr1g0147481 30.033 303 171 9 36 302 124 421 1.33e-31 131
Msa0884840 MtrunA17_Chr5g0428451 27.848 316 191 5 39 322 128 438 2.71e-31 128
Msa0884840 MtrunA17_Chr8g0360981 25.616 406 254 7 24 381 192 597 2.64e-25 110
Msa0884840 MtrunA17_Chr5g0433911 30.597 268 153 8 50 289 77 339 1.11e-24 108
Msa0884840 MtrunA17_Chr4g0048521 27.735 393 223 12 39 379 221 604 1.21e-20 96.3
Msa0884840 MtrunA17_Chr2g0281061 27.013 385 233 11 39 379 218 598 6.71e-19 90.5
Msa0884840 MtrunA17_Chr3g0113361 28.409 264 152 10 19 252 73 329 4.03e-17 84.7
Msa0884840 MtrunA17_Chr1g0193751 25.907 386 242 14 22 371 214 591 4.20e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0884840 AT1G71810.1 70.137 586 150 5 33 603 117 692 0.0 824
Msa0884840 AT1G79600.1 42.495 473 238 4 33 482 144 605 1.53e-127 391
Msa0884840 AT3G24190.1 37.805 574 290 9 10 520 170 739 3.41e-126 390
Msa0884840 AT4G31390.1 41.787 414 213 3 35 422 166 577 7.69e-105 332
Msa0884840 AT5G24970.3 38.833 497 244 9 35 475 136 628 2.87e-101 323
Msa0884840 AT5G24970.2 38.833 497 244 9 35 475 175 667 1.23e-100 323
Msa0884840 AT4G31390.2 40.821 414 192 5 35 422 166 552 1.40e-98 315
Msa0884840 AT5G24970.1 38.632 497 242 10 35 475 136 625 3.98e-98 315
Msa0884840 AT4G31390.3 41.579 380 194 3 69 422 1 378 1.89e-94 298
Msa0884840 AT2G39190.2 31.690 426 250 4 39 424 202 626 5.97e-68 236
Msa0884840 AT3G07700.1 34.933 375 217 6 36 385 190 562 3.49e-61 216
Msa0884840 AT3G07700.2 34.933 375 217 6 36 385 190 562 3.49e-61 216
Msa0884840 AT3G07700.4 34.933 375 217 6 36 385 190 562 3.49e-61 216
Msa0884840 AT5G64940.1 32.688 413 219 7 30 385 213 623 1.01e-60 215
Msa0884840 AT5G64940.2 32.688 413 219 7 30 385 213 623 1.01e-60 215
Msa0884840 AT3G07700.3 33.251 406 211 7 36 385 190 591 1.07e-58 209
Msa0884840 AT5G05200.1 26.198 313 200 4 39 322 129 439 3.95e-31 128
Msa0884840 AT4G24810.6 24.494 445 273 11 22 426 8 429 4.25e-29 120
Msa0884840 AT4G24810.1 24.494 445 273 11 22 426 8 429 4.25e-29 120
Msa0884840 AT2G39190.1 41.139 158 92 1 39 196 202 358 4.31e-29 119
Msa0884840 AT4G24810.2 24.550 444 274 10 22 426 51 472 7.55e-29 120
Msa0884840 AT4G24810.4 29.452 292 169 6 22 278 8 297 1.08e-28 117
Msa0884840 AT4G24810.5 29.452 292 169 6 22 278 8 297 1.34e-28 116
Msa0884840 AT5G50330.1 25.538 372 230 10 45 376 74 438 1.63e-27 116
Msa0884840 AT5G24810.1 28.846 312 178 9 30 302 89 395 1.10e-26 116
Msa0884840 AT4G24810.3 24.169 451 274 11 22 426 8 436 1.11e-26 113
Msa0884840 AT1G11390.1 26.555 418 254 10 39 406 208 622 8.24e-26 112
Msa0884840 AT1G61640.1 27.720 386 231 9 39 379 213 595 2.14e-25 111
Msa0884840 AT1G65950.2 29.572 257 148 6 50 278 113 364 5.78e-25 108
Msa0884840 AT1G65950.1 29.572 257 148 6 50 278 113 364 1.47e-24 108
Msa0884840 AT1G61640.3 27.614 373 222 9 39 366 213 582 7.92e-23 103
Msa0884840 AT5G24810.2 26.531 343 177 11 30 302 89 426 5.55e-22 101
Msa0884840 AT5G50330.2 24.194 372 219 11 45 376 74 422 5.85e-22 99.8
Msa0884840 AT2G40090.1 27.500 320 187 11 23 301 77 392 1.68e-16 83.2
Msa0884840 AT1G61640.2 32.584 178 112 3 39 208 213 390 1.01e-15 80.5
Msa0884840 AT4G01660.1 24.581 358 232 10 27 352 216 567 3.78e-15 79.3

Find 144 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTAAAGTAATGTAATTTA+TGG 0.157896 6_1:-38971868 Msa0884840:three_prime_UTR
CATAAATTACATTACTTTAC+TGG 0.186638 6_1:+38971869 None:intergenic
CATCTTGTAAATCGTGATTT+TGG 0.195023 6_1:-38975028 Msa0884840:CDS
CGCCTTATGCTATTGCTATC+AGG 0.198889 6_1:-38973031 Msa0884840:CDS
CTCCTTTGGAAACAGCATTT+TGG 0.207891 6_1:+38974681 None:intergenic
ATATCTTCTTCGGTCATTAA+AGG 0.212242 6_1:+38973076 None:intergenic
TACTAAGGTCTTATCTGTTT+TGG 0.221799 6_1:+38973514 None:intergenic
CCCTCAGCTTAGATCTTCTT+TGG 0.222220 6_1:-38974116 Msa0884840:CDS
GGTACACCAATTTCTTTGTT+TGG 0.222806 6_1:-38982529 Msa0884840:CDS
AAGAAGATATAGTCAATTTA+AGG 0.232775 6_1:-38973063 Msa0884840:CDS
AGGTGATTGCAAAACATTTC+AGG 0.237640 6_1:-38972092 Msa0884840:three_prime_UTR
CCTGTTGCTGCTGCTTCTCT+TGG 0.240125 6_1:-38979090 Msa0884840:CDS
TTTGGAGAATCTTCTTTATA+AGG 0.244527 6_1:-38974098 Msa0884840:intron
GATGGCAAATTAGCTTATTT+AGG 0.253896 6_1:-38975778 Msa0884840:intron
TATCAGCTTTGGAGACCTTC+TGG 0.264928 6_1:-38974651 Msa0884840:CDS
TTAGGTATAAATTCAAGTTT+AGG 0.308935 6_1:-38974348 Msa0884840:intron
TGCACTTGGGCTTGCTTCCT+TGG 0.320437 6_1:-38973143 Msa0884840:CDS
CCGAGTACAGTATTTGATTC+TGG 0.326284 6_1:+38972473 None:intergenic
AAAATTGAATACTGATCTTC+AGG 0.330649 6_1:-38978805 Msa0884840:intron
AATCACCCAAACAAAGAAAT+TGG 0.331273 6_1:+38982523 None:intergenic
GTACACCAATTTCTTTGTTT+GGG 0.333163 6_1:-38982528 Msa0884840:CDS
AACCAATGCATACCCGAAAA+AGG 0.340165 6_1:+38977879 None:intergenic
AAAGCAACTTCTGTGGAAAA+TGG 0.340590 6_1:+38979177 None:intergenic
GCTACGGACTTTGTCACTCT+TGG 0.357692 6_1:-38974998 Msa0884840:CDS
TGTCTGTAGCCTTGCTGTAC+TGG 0.361463 6_1:-38974227 Msa0884840:intron
GCTGATATTACGAACTCCTT+TGG 0.362238 6_1:+38974667 None:intergenic
ATATGTCACAATGATAGATT+TGG 0.368325 6_1:-38972045 Msa0884840:three_prime_UTR
AATAATTGCTGCTGGGATTC+CGG 0.377025 6_1:+38972238 None:intergenic
CACACCCTGGAAATCTTCTT+AGG 0.378467 6_1:-38975807 Msa0884840:CDS
TATGCATCACTTGTTGGATA+AGG 0.384312 6_1:-38982457 Msa0884840:intron
TAAATTGACTATATCTTCTT+CGG 0.387717 6_1:+38973066 None:intergenic
ATTTCAATTGCCAGCTAACT+TGG 0.391080 6_1:-38972218 Msa0884840:CDS
GATGTCCTAAGAAGATTTCC+AGG 0.391118 6_1:+38975802 None:intergenic
GGAGTTCGTAATATCAGCTT+TGG 0.397034 6_1:-38974662 Msa0884840:CDS
CTACGGACTTTGTCACTCTT+GGG 0.399542 6_1:-38974997 Msa0884840:intron
TGCTGCTGCTTCTCTTGGGC+AGG 0.409753 6_1:-38979085 Msa0884840:intron
TGTAGGCGCAGATTCGAAAA+TGG 0.411353 6_1:-38973480 Msa0884840:CDS
CAAGCAATGGTATCAAGTTC+AGG 0.411816 6_1:-38977040 Msa0884840:intron
CTGTTGCTGCTGCTTCTCTT+GGG 0.413397 6_1:-38979089 Msa0884840:CDS
TATATTAACTTAAGAAAAGA+TGG 0.415964 6_1:+38972001 None:intergenic
GAAGCAGCAGCAACAGGCTC+GGG 0.422444 6_1:+38979096 None:intergenic
CCAAGAGAAGCAGCAGCAAC+AGG 0.422729 6_1:+38979090 None:intergenic
ATCAGCTTTGGAGACCTTCT+GGG 0.425108 6_1:-38974650 Msa0884840:CDS
CTGTCCTGTTCTGCGAAGCC+TGG 0.426035 6_1:+38978926 None:intergenic
TGCAGAGCTAAGGAAGATAT+TGG 0.431754 6_1:-38980413 Msa0884840:CDS
GGAGACCTTCTGGGAGACTT+AGG 0.438773 6_1:-38974641 Msa0884840:CDS
CTACCCAAGACTTTGTAGTC+TGG 0.439954 6_1:+38974181 None:intergenic
TCTGTGGACAGGAACTTATA+TGG 0.440276 6_1:-38976466 Msa0884840:intron
CAAGCCAGGCTTCGCAGAAC+AGG 0.441419 6_1:-38978930 Msa0884840:CDS
ATAAATTACATTACTTTACT+GGG 0.441643 6_1:+38971870 None:intergenic
CTGCTGCGAGAACTATCAAA+AGG 0.443736 6_1:-38972174 Msa0884840:CDS
AAAATTTATGCATCACTTGT+TGG 0.447864 6_1:-38982463 Msa0884840:CDS
TTCAATCAACTTCTTGAGTG+TGG 0.451469 6_1:-38975847 Msa0884840:CDS
ACGGCTTCTTTCTCTGCAGT+TGG 0.455302 6_1:+38974878 None:intergenic
TTTCTGTTAGTGTAAAAGAA+AGG 0.455354 6_1:+38973444 None:intergenic
TAACCCAGACTACAAAGTCT+TGG 0.462363 6_1:-38974185 Msa0884840:CDS
GCCGTTACAAAGGCTTTGAC+AGG 0.463469 6_1:-38974860 Msa0884840:intron
AACTGTTGAACCAAGTTAGC+TGG 0.464113 6_1:+38972208 None:intergenic
AACCCAGACTACAAAGTCTT+GGG 0.469360 6_1:-38974184 Msa0884840:CDS
GCAATTGAAATAATTGCTGC+TGG 0.469883 6_1:+38972230 None:intergenic
TACAGTATTTGATTCTGGTC+GGG 0.473562 6_1:+38972478 None:intergenic
TACCCAAGACTTTGTAGTCT+GGG 0.475638 6_1:+38974182 None:intergenic
GTACTGGAAGGAATTGCAAT+TGG 0.483601 6_1:-38974211 Msa0884840:CDS
GCTTCTTTCTCTGCAGTTGG+TGG 0.488500 6_1:+38974881 None:intergenic
AGAAGCAGCAGCAACAGGCT+CGG 0.489855 6_1:+38979095 None:intergenic
AACAGGAAGAATGTCTTGAA+TGG 0.494577 6_1:+38972417 None:intergenic
AGGAAGATATTGGTGGAACT+TGG 0.495469 6_1:-38980403 Msa0884840:CDS
GCCTTATGCTATTGCTATCA+GGG 0.500679 6_1:-38973030 Msa0884840:CDS
AACATGATTGAACAAGAACT+TGG 0.501877 6_1:-38979153 Msa0884840:CDS
TCAATCAACTTCTTGAGTGT+GGG 0.503138 6_1:-38975846 Msa0884840:CDS
TACAGATGGTATCTTTACTA+AGG 0.506833 6_1:+38973499 None:intergenic
GATATTGGTGGAACTTGGTC+CGG 0.507286 6_1:-38980398 Msa0884840:intron
TCAGGAATGACGGAAAGAAC+AGG 0.508934 6_1:+38972400 None:intergenic
CTAAGAAGATTTCCAGGGTG+TGG 0.512895 6_1:+38975808 None:intergenic
CAGGCTTCGCAGAACAGGAC+AGG 0.514638 6_1:-38978925 Msa0884840:CDS
GATAGTTCTCGCAGCAGCGC+GGG 0.517491 6_1:+38972180 None:intergenic
GAAATTGCAGCTTGAACACC+TGG 0.518786 6_1:+38978879 None:intergenic
AGGTTAGAGCTGCAGAGCTA+AGG 0.520960 6_1:-38980423 Msa0884840:CDS
TTCGAATCTGCGCCTACAGA+TGG 0.527450 6_1:+38973485 None:intergenic
TCTTGCAGCAGCTGTTTCCA+AGG 0.528924 6_1:+38973126 None:intergenic
TTCCAAAATGCTGTTTCCAA+AGG 0.531054 6_1:-38974683 Msa0884840:CDS
TGCAGGCAGTTGTCGATGAG+TGG 0.539064 6_1:-38977910 Msa0884840:intron
GCAAGGTCCTTGTCATGGAA+TGG 0.539892 6_1:-38976393 Msa0884840:CDS
CCCCTGATAGCAATAGCATA+AGG 0.541950 6_1:+38973029 None:intergenic
AGATTCGAAAATGGTTATGA+AGG 0.542153 6_1:-38973471 Msa0884840:CDS
GATCATAGGTTTATCAAGCC+AGG 0.545220 6_1:-38978944 Msa0884840:intron
GGCATATATCAAAATTGCGC+AGG 0.545376 6_1:-38980079 Msa0884840:CDS
ATGTAGGGTTTAGATGCACT+TGG 0.550374 6_1:-38973157 Msa0884840:intron
GCTGGGCTGGCTAAAAGAGC+AGG 0.551138 6_1:-38978828 Msa0884840:CDS
CCAGAATCAAATACTGTACT+CGG 0.551398 6_1:-38972473 Msa0884840:CDS
CCTTGTCATGGAATGGATTG+AGG 0.554585 6_1:-38976386 Msa0884840:intron
TAGATTTACCTCAGGAATGA+CGG 0.561552 6_1:+38972390 None:intergenic
AACGCAAGATCAAAATGTCA+AGG 0.562150 6_1:+38978856 None:intergenic
AACTCGCAAGGTCCTTGTCA+TGG 0.566536 6_1:-38976398 Msa0884840:CDS
CCAAAGAAGATCTAAGCTGA+GGG 0.567593 6_1:+38974116 None:intergenic
CTCTGAGAAAATTTCAGACA+AGG 0.570824 6_1:+38979125 None:intergenic
CATGTTGAAAGCAACTTCTG+TGG 0.571892 6_1:+38979170 None:intergenic
TACAATAATGAAGCAAGCAA+TGG 0.574022 6_1:-38977053 Msa0884840:CDS
ACTTCTCACTTGTTATCCGA+AGG 0.577116 6_1:-38974315 Msa0884840:intron
TAAGAAGATTTCCAGGGTGT+GGG 0.577245 6_1:+38975809 None:intergenic
GTACAGTATTTGATTCTGGT+CGG 0.577930 6_1:+38972477 None:intergenic
GCAGGCAGTTGTCGATGAGT+GGG 0.578173 6_1:-38977909 Msa0884840:intron
ATAACAAGTGAGAAGTATGA+AGG 0.579938 6_1:+38974322 None:intergenic
ACGCAAGATCAAAATGTCAA+GGG 0.580070 6_1:+38978857 None:intergenic
GTGTACTCTGTGTACATCAA+AGG 0.581508 6_1:+38976421 None:intergenic
ACCTGTCAAAGCCTTTGTAA+CGG 0.582281 6_1:+38974859 None:intergenic
TATCATGCAGACCCACACCC+TGG 0.585654 6_1:-38975820 Msa0884840:CDS
TTCAAACAAGAATTGCGTGA+TGG 0.588415 6_1:-38975070 Msa0884840:CDS
TGTTCTTTCCGTCATTCCTG+AGG 0.588868 6_1:-38972398 Msa0884840:intron
TTAGTAAAGATACCATCTGT+AGG 0.591139 6_1:-38973497 Msa0884840:CDS
CAATTGAAATAATTGCTGCT+GGG 0.591793 6_1:+38972231 None:intergenic
TGCTGCGAGAACTATCAAAA+GGG 0.593150 6_1:-38972173 Msa0884840:CDS
CAATAGCATAAGGCGTTGGA+AGG 0.595659 6_1:+38973039 None:intergenic
TGTAGGGTTTAGATGCACTT+GGG 0.596142 6_1:-38973156 Msa0884840:intron
AATCTTCTTAGGACATCTGA+TGG 0.602700 6_1:-38975796 Msa0884840:CDS
TCTTGGGTAGTACTTACCCA+TGG 0.603506 6_1:-38974168 Msa0884840:CDS
ATATGGTTCTATACAAGATG+TGG 0.611017 6_1:-38976449 Msa0884840:CDS
AATTGTTCAAGAATTTGCCA+AGG 0.611754 6_1:-38973309 Msa0884840:intron
TGTAGCCTTGCTGTACTGGA+AGG 0.614360 6_1:-38974223 Msa0884840:intron
TCCAAAGAAGATCTAAGCTG+AGG 0.616907 6_1:+38974115 None:intergenic
ATAGCAATAGCATAAGGCGT+TGG 0.618335 6_1:+38973035 None:intergenic
AATTGCTGCTGGGATTCCGG+TGG 0.620635 6_1:+38972241 None:intergenic
GAAAAGAAGAAATTACTGAA+AGG 0.620679 6_1:+38973100 None:intergenic
TAAATTACATTACTTTACTG+GGG 0.622826 6_1:+38971871 None:intergenic
ATGTAAATTTCAGCTCCCAC+CGG 0.623839 6_1:-38972257 Msa0884840:intron
CCTCAATCCATTCCATGACA+AGG 0.624850 6_1:+38976386 None:intergenic
TGGTTCTATACAAGATGTGG+TGG 0.625881 6_1:-38976446 Msa0884840:CDS
AGAGCTAAGGAAGATATTGG+TGG 0.628817 6_1:-38980410 Msa0884840:CDS
CTGTCAGCAAAGACTCAAGT+CGG 0.630172 6_1:+38973893 None:intergenic
ACTTGAGTCTTTGCTGACAG+AGG 0.630712 6_1:-38973890 Msa0884840:intron
CCTTATGCTATTGCTATCAG+GGG 0.636422 6_1:-38973029 Msa0884840:CDS
TGTTGCAGGGTGGATTTGTG+AGG 0.637741 6_1:-38973337 Msa0884840:intron
CAATTCCTTCCAGTACAGCA+AGG 0.639134 6_1:+38974218 None:intergenic
ATTGCTGCTGGGATTCCGGT+GGG 0.640904 6_1:+38972242 None:intergenic
AGAGAAAGAAGCCGTTACAA+AGG 0.645463 6_1:-38974870 Msa0884840:CDS
GCTGTTAAAGTGCAAAGACC+AGG 0.652976 6_1:-38978897 Msa0884840:CDS
CACAGAGTACACAACTCGCA+AGG 0.664553 6_1:-38976410 Msa0884840:CDS
AATGTCATAGGGAGAGACAA+AGG 0.665794 6_1:-38972506 Msa0884840:intron
TGATAGTTCTCGCAGCAGCG+CGG 0.673188 6_1:+38972179 None:intergenic
TTGTTCCTAAGTCTCCCAGA+AGG 0.676651 6_1:+38974636 None:intergenic
GAGAGCTCATTTAGATACGA+TGG 0.683409 6_1:+38979222 None:intergenic
ATGTCCTAAGAAGATTTCCA+GGG 0.685364 6_1:+38975803 None:intergenic
CAAAGAAGATCTAAGCTGAG+GGG 0.721571 6_1:+38974117 None:intergenic
GAATCAAATACTGTACTCGG+AGG 0.741867 6_1:-38972470 Msa0884840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTTTTTTTT+AGG - chr6_1:38978840-38978859 Msa0884840:CDS 0.0%
!!! AAAAACTTTAAAAAAAGAAA+AGG - chr6_1:38972883-38972902 Msa0884840:intron 10.0%
!! TAAGATAAAATAAAATCAAA+AGG + chr6_1:38973141-38973160 None:intergenic 10.0%
!!! AAAAAATATATTTTAGTTTG+CGG + chr6_1:38974315-38974334 None:intergenic 10.0%
!!! AAAAAATTACAAATACTTTT+AGG + chr6_1:38974911-38974930 None:intergenic 10.0%
!!! ATTTTTTGATAAATTAGATT+GGG + chr6_1:38976665-38976684 None:intergenic 10.0%
!!! TATTTTTTGATAAATTAGAT+TGG + chr6_1:38976666-38976685 None:intergenic 10.0%
!!! AATTGTATTTTTATTTGATT+AGG - chr6_1:38977051-38977070 Msa0884840:CDS 10.0%
!!! TTAAATTTGATAACTTAAAA+TGG + chr6_1:38979492-38979511 None:intergenic 10.0%
!!! TTAATTTTTTTTTATTTCCT+TGG - chr6_1:38980853-38980872 Msa0884840:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:38976012-38976031 None:intergenic 100.0%
!! TGATAGAATCATTAAAAATA+AGG - chr6_1:38971956-38971975 Msa0884840:three_prime_UTR 15.0%
!!! ATGTTGTAAATATTTCTATT+AGG - chr6_1:38972041-38972060 Msa0884840:three_prime_UTR 15.0%
!!! AATATTTCTATTAGGTTATT+TGG - chr6_1:38972049-38972068 Msa0884840:three_prime_UTR 15.0%
!!! ATATTTCTATTAGGTTATTT+GGG - chr6_1:38972050-38972069 Msa0884840:three_prime_UTR 15.0%
!!! ATATATAAGCTTTTTTCATA+AGG + chr6_1:38973108-38973127 None:intergenic 15.0%
!! AAAACAACTTACAAATTATA+TGG - chr6_1:38973818-38973837 Msa0884840:intron 15.0%
!!! TATGGAAATAAGAATTTTTT+AGG - chr6_1:38973836-38973855 Msa0884840:intron 15.0%
!!! ACATGACATATTTAAAATTT+TGG + chr6_1:38974258-38974277 None:intergenic 15.0%
!!! AAAAATATATTTTAGTTTGC+GGG + chr6_1:38974314-38974333 None:intergenic 15.0%
!! AATACAAATATTTGGAAATA+TGG + chr6_1:38974845-38974864 None:intergenic 15.0%
!!! AGATTTGAAATACAAATATT+TGG + chr6_1:38974853-38974872 None:intergenic 15.0%
!!! TTCAACTTTTTTTTTTTTGT+AGG - chr6_1:38975187-38975206 Msa0884840:intron 15.0%
!!! TTTTTTGATAAATTAGATTG+GGG + chr6_1:38976664-38976683 None:intergenic 15.0%
!! AAAAAATAAAGTGAATGTAT+GGG - chr6_1:38976678-38976697 Msa0884840:intron 15.0%
!! AATTGTAATTGCAAAAAAAA+TGG + chr6_1:38977035-38977054 None:intergenic 15.0%
!! AAGAACAATAATATAAGAAT+GGG + chr6_1:38977104-38977123 None:intergenic 15.0%
!! AAAGAACAATAATATAAGAA+TGG + chr6_1:38977105-38977124 None:intergenic 15.0%
!! ATCACAATACTTAATAAATT+TGG - chr6_1:38977619-38977638 Msa0884840:intron 15.0%
!!! GATATTTTCTAATAATTACA+GGG + chr6_1:38978202-38978221 None:intergenic 15.0%
!!! TGATATTTTCTAATAATTAC+AGG + chr6_1:38978203-38978222 None:intergenic 15.0%
!! AAAGAAAATGTAAGATATAA+TGG + chr6_1:38978356-38978375 None:intergenic 15.0%
!! TATAGTTGTAACTATAAAAT+TGG + chr6_1:38979665-38979684 None:intergenic 15.0%
!! CTGATACATTAAATATATAA+TGG - chr6_1:38979846-38979865 Msa0884840:intron 15.0%
!!! CTTTTTCTCTTATTTTTTTT+AGG - chr6_1:38980077-38980096 Msa0884840:CDS 15.0%
!! AATTAGAAAGAAAAGATATA+TGG + chr6_1:38980431-38980450 None:intergenic 15.0%
!! AGATATTAAAATAAATACCT+TGG + chr6_1:38981154-38981173 None:intergenic 15.0%
!!! TATTGATTGATTTTTCTTTT+AGG - chr6_1:38981521-38981540 Msa0884840:intron 15.0%
!!! ATTGATTGATTTTTCTTTTA+GGG - chr6_1:38981522-38981541 Msa0884840:intron 15.0%
!!! TTTTAATTTGAAACAGTTTT+AGG + chr6_1:38981634-38981653 None:intergenic 15.0%
!! TATATTAACTTAAGAAAAGA+TGG + chr6_1:38982445-38982464 None:intergenic 15.0%
!! ATAAATTACATTACTTTACT+GGG + chr6_1:38982576-38982595 None:intergenic 15.0%
!! AATTTAAATATCCTCTCTTT+AGG - chr6_1:38971893-38971912 Msa0884840:three_prime_UTR 20.0%
!! ATACAAGATTAGATCATAAT+GGG + chr6_1:38972283-38972302 None:intergenic 20.0%
!! TATACAAGATTAGATCATAA+TGG + chr6_1:38972284-38972303 None:intergenic 20.0%
!! CAAAATCACTTTCTTAAATA+AGG + chr6_1:38972479-38972498 None:intergenic 20.0%
!!! TCCAATATTTTAGTCTTTTT+TGG - chr6_1:38972684-38972703 Msa0884840:intron 20.0%
!! ACCAAAAAAGACTAAAATAT+TGG + chr6_1:38972688-38972707 None:intergenic 20.0%
!! TTAAAAACAACTACCAAAAA+AGG - chr6_1:38972849-38972868 Msa0884840:intron 20.0%
!! TAAAAACAACTACCAAAAAA+GGG - chr6_1:38972850-38972869 Msa0884840:intron 20.0%
!!! NNNNNCTTTAGAAGAACTTA+TGG - chr6_1:38973063-38973082 Msa0884840:CDS 20.0%
!! TCATAAAAATGCTTATGAAT+AGG + chr6_1:38973460-38973479 None:intergenic 20.0%
!! TGTTTATCTAAACAACTATT+TGG - chr6_1:38973512-38973531 Msa0884840:CDS 20.0%
!! CAATTATAAAATAACCAGAA+TGG + chr6_1:38974075-38974094 None:intergenic 20.0%
!!! TCTGGTTATTTTATAATTGT+TGG - chr6_1:38974076-38974095 Msa0884840:intron 20.0%
!! ATTGAGTTATGATAATTGAT+AGG - chr6_1:38974155-38974174 Msa0884840:CDS 20.0%
!! TTGAGTTATGATAATTGATA+GGG - chr6_1:38974156-38974175 Msa0884840:CDS 20.0%
!!! ACTTTTAGGTATATTTGTTT+AGG + chr6_1:38974897-38974916 None:intergenic 20.0%
!!! TTGTAATTTTTTATCTGATC+TGG - chr6_1:38974919-38974938 Msa0884840:intron 20.0%
!! ATTGAATCTGGTTAATATTA+TGG - chr6_1:38974948-38974967 Msa0884840:intron 20.0%
!! TATTCAAATAAATGACAGAA+AGG + chr6_1:38974995-38975014 None:intergenic 20.0%
!! AACTCAATTGATAAAAGATT+TGG + chr6_1:38975025-38975044 None:intergenic 20.0%
!!! GATCATGTCAATTTAATTTT+TGG - chr6_1:38975138-38975157 Msa0884840:intron 20.0%
!! TATTAGAAAGGAAAAAAACA+GGG + chr6_1:38976035-38976054 None:intergenic 20.0%
!! CAAATTAAATCCTATGAATT+AGG + chr6_1:38976125-38976144 None:intergenic 20.0%
!! TTTAATTGTCTTAGAAATTG+TGG - chr6_1:38976312-38976331 Msa0884840:intron 20.0%
!!! ATGTTATTTTTTTACTTCGT+TGG - chr6_1:38976355-38976374 Msa0884840:intron 20.0%
!!! GATATAAAGATTAATGGATA+TGG + chr6_1:38976432-38976451 None:intergenic 20.0%
!! CAGATAGATATAAAGATTAA+TGG + chr6_1:38976438-38976457 None:intergenic 20.0%
!! CAAAAAATAAAGTGAATGTA+TGG - chr6_1:38976677-38976696 Msa0884840:intron 20.0%
!! AAAAATAAAGTGAATGTATG+GGG - chr6_1:38976679-38976698 Msa0884840:intron 20.0%
!! ACATACAATATGAATAGTTA+CGG + chr6_1:38976771-38976790 None:intergenic 20.0%
!! AACTATTCATATTGTATGTT+TGG - chr6_1:38976772-38976791 Msa0884840:intron 20.0%
!! TGATGTTATAACATTTCTAA+AGG + chr6_1:38977560-38977579 None:intergenic 20.0%
!!! GAGAGAATTGATTTATATTT+CGG - chr6_1:38977696-38977715 Msa0884840:intron 20.0%
!!! TTACTGTATTTTTGCAATTA+TGG - chr6_1:38978102-38978121 Msa0884840:intron 20.0%
!! AATAATCTTCCAAATTGATA+CGG - chr6_1:38978301-38978320 Msa0884840:intron 20.0%
!!! AATTCTTAGTTTTTGCATAA+TGG - chr6_1:38978516-38978535 Msa0884840:intron 20.0%
!!! GTATTTTATCTTATTATCCT+TGG - chr6_1:38978739-38978758 Msa0884840:intron 20.0%
!!! TTTGAAGTTTTCTTTTTATC+TGG - chr6_1:38979059-38979078 Msa0884840:intron 20.0%
!!! TGGGTATTTATGTTTATTTT+TGG - chr6_1:38979465-38979484 Msa0884840:intron 20.0%
!!! AGAACTTTCAAATATTTTGT+AGG + chr6_1:38979877-38979896 None:intergenic 20.0%
!!! TTAGGTATAAATTCAAGTTT+AGG - chr6_1:38980095-38980114 Msa0884840:intron 20.0%
!! AAAAGACAAAAGAAAGAATA+GGG + chr6_1:38980625-38980644 None:intergenic 20.0%
!! TAAAAGACAAAAGAAAGAAT+AGG + chr6_1:38980626-38980645 None:intergenic 20.0%
!!! AAAAGCATCTAAATTGTTAA+TGG + chr6_1:38981041-38981060 None:intergenic 20.0%
!! TAAATTGACTATATCTTCTT+CGG + chr6_1:38981380-38981399 None:intergenic 20.0%
!! AAGAAGATATAGTCAATTTA+AGG - chr6_1:38981380-38981399 Msa0884840:intron 20.0%
!! AGTTTACATTATGATTATAG+TGG + chr6_1:38981673-38981692 None:intergenic 20.0%
!!! ATTTTTTTTACTTCTCACTA+AGG - chr6_1:38982331-38982350 Msa0884840:intron 20.0%
!! TACCAAAAAGTAATAAAGAA+TGG - chr6_1:38982542-38982561 Msa0884840:intron 20.0%
!!! TTCCATTCTTTATTACTTTT+TGG + chr6_1:38982547-38982566 None:intergenic 20.0%
!! TAAATTACATTACTTTACTG+GGG + chr6_1:38982575-38982594 None:intergenic 20.0%
!! CATAAATTACATTACTTTAC+TGG + chr6_1:38982577-38982596 None:intergenic 20.0%
!! CAGTAAAGTAATGTAATTTA+TGG - chr6_1:38982575-38982594 Msa0884840:intron 20.0%
! AAAATTTATGCATCACTTGT+TGG - chr6_1:38971980-38971999 Msa0884840:three_prime_UTR 25.0%
! GAATAATATCACTACTAGAT+CGG - chr6_1:38972366-38972385 Msa0884840:intron 25.0%
! AAAAACTGTTAATAGACTTG+AGG - chr6_1:38972415-38972434 Msa0884840:CDS 25.0%
! AAAACTGTTAATAGACTTGA+GGG - chr6_1:38972416-38972435 Msa0884840:CDS 25.0%
! AATCACTTTCTTAAATAAGG+TGG + chr6_1:38972476-38972495 None:intergenic 25.0%
! ATCCTGGAAAACTATTATTT+AGG - chr6_1:38972652-38972671 Msa0884840:intron 25.0%
!! AACCTAAATAATAGTTTTCC+AGG + chr6_1:38972657-38972676 None:intergenic 25.0%
!!! TATTTTAGTCTTTTTTGGTG+TGG - chr6_1:38972689-38972708 Msa0884840:intron 25.0%
!!! TTTAATAAAGGTCCCTTTTT+TGG + chr6_1:38972865-38972884 None:intergenic 25.0%
! ATGATAAACACTTATGCAAT+AGG - chr6_1:38973194-38973213 Msa0884840:intron 25.0%
!! TTTTCATAATTTCTCCAAGA+TGG - chr6_1:38973622-38973641 Msa0884840:intron 25.0%
! TCTTAAATTCTCCAAATGTT+TGG + chr6_1:38973754-38973773 None:intergenic 25.0%
!!! AGAATTTTTTAGGCATTTGA+TGG - chr6_1:38973846-38973865 Msa0884840:intron 25.0%
!!! TAGGTGCTATTTTATATCTT+AGG - chr6_1:38974132-38974151 Msa0884840:CDS 25.0%
!!! CTATTTCTTTTCTTTGTTTC+TGG - chr6_1:38974445-38974464 Msa0884840:intron 25.0%
! TGATGAAATGAAAACCATAT+AGG + chr6_1:38974486-38974505 None:intergenic 25.0%
!! TAACTAGGGTTTTTATCAAA+TGG + chr6_1:38974565-38974584 None:intergenic 25.0%
! TAGTGTAGTTAGTATTATTC+CGG - chr6_1:38974637-38974656 Msa0884840:CDS 25.0%
!! AAAGGAAAACTGATAATGAT+AGG + chr6_1:38974749-38974768 None:intergenic 25.0%
!! TATCATTATCAGTTTTCCTT+TGG - chr6_1:38974748-38974767 Msa0884840:intron 25.0%
! TAAATGTTCATATGCTGTTA+AGG - chr6_1:38975046-38975065 Msa0884840:CDS 25.0%
! AAATGTTCATATGCTGTTAA+GGG - chr6_1:38975047-38975066 Msa0884840:CDS 25.0%
! AAAATTGAATACTGATCTTC+AGG - chr6_1:38975638-38975657 Msa0884840:intron 25.0%
!!! TAAGATTGCTTTTAGAATTC+AGG - chr6_1:38975685-38975704 Msa0884840:intron 25.0%
!!! AAGATTGCTTTTAGAATTCA+GGG - chr6_1:38975686-38975705 Msa0884840:intron 25.0%
! ATTAGAAAGGAAAAAAACAG+GGG + chr6_1:38976034-38976053 None:intergenic 25.0%
! CTATTAGAAAGGAAAAAAAC+AGG + chr6_1:38976036-38976055 None:intergenic 25.0%
! AGTTTAAGCTTACAGAAATT+AGG - chr6_1:38976096-38976115 Msa0884840:intron 25.0%
! GTTTAAGCTTACAGAAATTA+GGG - chr6_1:38976097-38976116 Msa0884840:intron 25.0%
! TTTAAGCTTACAGAAATTAG+GGG - chr6_1:38976098-38976117 Msa0884840:intron 25.0%
!! GATATTTGTGAAGATGTTTT+AGG - chr6_1:38976257-38976276 Msa0884840:intron 25.0%
! AATAACATACACATGTATCT+AGG + chr6_1:38976343-38976362 None:intergenic 25.0%
!! ATATTGTATGTTTGGTTTCA+TGG - chr6_1:38976780-38976799 Msa0884840:intron 25.0%
! AGTTTAGTGAAAAAGAATGA+TGG - chr6_1:38976913-38976932 Msa0884840:intron 25.0%
! GTTTAGTGAAAAAGAATGAT+GGG - chr6_1:38976914-38976933 Msa0884840:intron 25.0%
!!! TGGGATTTTTTATTTTGATC+TGG - chr6_1:38976933-38976952 Msa0884840:intron 25.0%
!! TTTTCTGAGTAAAACTGATT+CGG + chr6_1:38977184-38977203 None:intergenic 25.0%
! TAGAAACTGAAATTGAATAC+AGG - chr6_1:38977347-38977366 Msa0884840:intron 25.0%
! GTATTGTGATTTAATCAATG+AGG + chr6_1:38977609-38977628 None:intergenic 25.0%
!! TTTTCCCAAATTTATCCTTT+AGG - chr6_1:38977672-38977691 Msa0884840:intron 25.0%
!! TCCACTAGTTATAGATATTT+TGG - chr6_1:38977751-38977770 Msa0884840:intron 25.0%
! TCCAAAATATCTATAACTAG+TGG + chr6_1:38977755-38977774 None:intergenic 25.0%
! TACATTTGAAAATGTGAAAG+AGG - chr6_1:38977790-38977809 Msa0884840:intron 25.0%
!!! TTTTTCTAGCCTCTTTTTAT+AGG + chr6_1:38977817-38977836 None:intergenic 25.0%
!! TCTCAAGAGTCTTATATTTA+TGG - chr6_1:38977838-38977857 Msa0884840:intron 25.0%
!! AGTCTTATATTTATGGACAA+AGG - chr6_1:38977845-38977864 Msa0884840:intron 25.0%
! AAATCTGAATCTCTAGTTAT+GGG + chr6_1:38977887-38977906 None:intergenic 25.0%
!! AACAAGAAATGCTAATTTGT+TGG - chr6_1:38977934-38977953 Msa0884840:intron 25.0%
!!! ACAAGAAATGCTAATTTGTT+GGG - chr6_1:38977935-38977954 Msa0884840:intron 25.0%
! GCAAAAATACAGTAATCAAA+CGG + chr6_1:38978097-38978116 None:intergenic 25.0%
! ATGAACAGTGAATTTATCTA+GGG + chr6_1:38978152-38978171 None:intergenic 25.0%
!!! AATTTGGAAGATTATTTCTG+GGG + chr6_1:38978297-38978316 None:intergenic 25.0%
!! CAATTTGGAAGATTATTTCT+GGG + chr6_1:38978298-38978317 None:intergenic 25.0%
! TCAATTTGGAAGATTATTTC+TGG + chr6_1:38978299-38978318 None:intergenic 25.0%
!! TGTAAGATATAATGGAATGT+AGG + chr6_1:38978348-38978367 None:intergenic 25.0%
!! AAGTTTACTATTGCTATTGT+AGG - chr6_1:38978412-38978431 Msa0884840:intron 25.0%
!! AGTTTACTATTGCTATTGTA+GGG - chr6_1:38978413-38978432 Msa0884840:intron 25.0%
! GAAATAAACAAAATAAGAGC+AGG + chr6_1:38978544-38978563 None:intergenic 25.0%
!! TTTATTTCCTGATAATGACT+AGG - chr6_1:38978556-38978575 Msa0884840:intron 25.0%
! AAATACGAATTAGCAAACAT+CGG + chr6_1:38978725-38978744 None:intergenic 25.0%
!!! CATATATTTGACTTGTTTTG+AGG - chr6_1:38978795-38978814 Msa0884840:intron 25.0%
! GTTTATCATTTCTTGATATG+TGG - chr6_1:38978897-38978916 Msa0884840:CDS 25.0%
! AAAGAAAACTTCAAAACACT+GGG + chr6_1:38979054-38979073 None:intergenic 25.0%
! AAAAGAAAACTTCAAAACAC+TGG + chr6_1:38979055-38979074 None:intergenic 25.0%
!! GTTTTCTTTTTATCTGGTAA+TGG - chr6_1:38979065-38979084 Msa0884840:intron 25.0%
!!! TTTTTATCTGGTAATGGTTT+GGG - chr6_1:38979071-38979090 Msa0884840:intron 25.0%
! ACACAATTTATGCATTTGTT+TGG - chr6_1:38979121-38979140 Msa0884840:CDS 25.0%
! GAACAAACCAAACATAAATT+AGG + chr6_1:38979213-38979232 None:intergenic 25.0%
!! AACTCTAGAAGATATATCTA+AGG - chr6_1:38979267-38979286 Msa0884840:intron 25.0%
!! TTAACATTTTCGATGCTATA+AGG - chr6_1:38979508-38979527 Msa0884840:intron 25.0%
!!! TGTCTGCTTTTTAATTTATC+AGG - chr6_1:38979533-38979552 Msa0884840:intron 25.0%
! GTTATTACGTTATTGTGTTT+AGG - chr6_1:38979605-38979624 Msa0884840:intron 25.0%
! GAATTCTAAATTACTGTTCT+TGG - chr6_1:38979629-38979648 Msa0884840:intron 25.0%
! TAACAAATAAACCTCAAGAA+CGG + chr6_1:38979707-38979726 None:intergenic 25.0%
! ATTTGAAAGTTCTTTCTGTT+TGG - chr6_1:38979884-38979903 Msa0884840:intron 25.0%
! AATTACTTTCCCTAATAAAG+AGG + chr6_1:38979973-38979992 None:intergenic 25.0%
! TTTATTAGGGAAAGTAATTC+TGG - chr6_1:38979974-38979993 Msa0884840:intron 25.0%
!! ACATTAAATTAAGCCTTGTA+TGG + chr6_1:38980163-38980182 None:intergenic 25.0%
! TTTGGAGAATCTTCTTTATA+AGG - chr6_1:38980345-38980364 Msa0884840:intron 25.0%
! CTTCTTTATAAGGTAAACAT+AGG - chr6_1:38980355-38980374 Msa0884840:intron 25.0%
! GATAATTAGATTTGACAATG+AGG + chr6_1:38980456-38980475 None:intergenic 25.0%
! AAAGACAAAAGAAAGAATAG+GGG + chr6_1:38980624-38980643 None:intergenic 25.0%
!!! TTTTAAAGAAAAGATAGCCA+AGG + chr6_1:38980873-38980892 None:intergenic 25.0%
! TTTCTGTTAGTGTAAAAGAA+AGG + chr6_1:38981002-38981021 None:intergenic 25.0%
!! TTCTTTTACACTAACAGAAA+AGG - chr6_1:38981002-38981021 Msa0884840:intron 25.0%
! AAACTAGAAATGAAGAAAGA+AGG + chr6_1:38981229-38981248 None:intergenic 25.0%
! GAAAAGAAGAAATTACTGAA+AGG + chr6_1:38981346-38981365 None:intergenic 25.0%
! AATATAACAATGCAGAGATA+TGG + chr6_1:38981491-38981510 None:intergenic 25.0%
! ATGAAACATGAAACGATAAT+TGG - chr6_1:38981868-38981887 Msa0884840:intron 25.0%
! ATATGTCACAATGATAGATT+TGG - chr6_1:38982398-38982417 Msa0884840:intron 25.0%
! GTACACCAATTTCTTTGTTT+GGG - chr6_1:38971915-38971934 Msa0884840:three_prime_UTR 30.0%
AATCACCCAAACAAAGAAAT+TGG + chr6_1:38971923-38971942 None:intergenic 30.0%
AAGGTAAGTATTTATCGATG+TGG - chr6_1:38972005-38972024 Msa0884840:three_prime_UTR 30.0%
TTTCTATTAGGTTATTTGGG+TGG - chr6_1:38972053-38972072 Msa0884840:three_prime_UTR 30.0%
AAACTGTTAATAGACTTGAG+GGG - chr6_1:38972417-38972436 Msa0884840:CDS 30.0%
!! GATTTTATTTGATGTGCACT+TGG - chr6_1:38972625-38972644 Msa0884840:intron 30.0%
CCCTTATCATGCAAATTTAT+GGG + chr6_1:38972775-38972794 None:intergenic 30.0%
CCCATAAATTTGCATGATAA+GGG - chr6_1:38972772-38972791 Msa0884840:intron 30.0%
GAAAACAATGACACTTCAAA+AGG - chr6_1:38972813-38972832 Msa0884840:intron 30.0%
! CACTTTTGTAATTGTAGTGA+AGG + chr6_1:38972944-38972963 None:intergenic 30.0%
CTTCACTACAATTACAAAAG+TGG - chr6_1:38972942-38972961 Msa0884840:intron 30.0%
AATAAGCGGAAAACAGTTTA+TGG + chr6_1:38973356-38973375 None:intergenic 30.0%
GAAGAGCTTATGAAAATAAG+CGG + chr6_1:38973370-38973389 None:intergenic 30.0%
! GCTTATTTGAGTTTATCTAG+TGG - chr6_1:38973539-38973558 Msa0884840:intron 30.0%
! TATTTGAGTTTATCTAGTGG+CGG - chr6_1:38973542-38973561 Msa0884840:intron 30.0%
! ATGCTGTTTATCCAAACATT+TGG - chr6_1:38973740-38973759 Msa0884840:intron 30.0%
! TCAGTTCTTTTCATTGCAAA+CGG + chr6_1:38973970-38973989 None:intergenic 30.0%
TGCAAAATCGAACAGTAAAA+AGG + chr6_1:38974001-38974020 None:intergenic 30.0%
! TTTTTACTGTTCGATTTTGC+AGG - chr6_1:38974000-38974019 Msa0884840:intron 30.0%
ATAAAATAGCACCTAGTTTG+AGG + chr6_1:38974127-38974146 None:intergenic 30.0%
ATGTCATGTGAATTTCTTAG+TGG - chr6_1:38974269-38974288 Msa0884840:intron 30.0%
CATTTGTGATTCTTCCTATA+TGG - chr6_1:38974469-38974488 Msa0884840:intron 30.0%
TCAAATGGAATTAGATTCAG+TGG + chr6_1:38974550-38974569 None:intergenic 30.0%
TGATAAAAACCCTAGTTATG+AGG - chr6_1:38974567-38974586 Msa0884840:intron 30.0%
AACATCATACTTCAGTAGTT+TGG + chr6_1:38974602-38974621 None:intergenic 30.0%
ATCTGGTAGTTAATTGAATC+TGG - chr6_1:38974936-38974955 Msa0884840:intron 30.0%
AACATGATTGAACAAGAACT+TGG - chr6_1:38975290-38975309 Msa0884840:intron 30.0%
GCTAGAAAAATACACCAATA+AGG + chr6_1:38975397-38975416 None:intergenic 30.0%
!! CATTTTGATCTTGCGTTTTA+TGG - chr6_1:38975593-38975612 Msa0884840:intron 30.0%
! TTATCATTGCTGTTGAAGTT+AGG - chr6_1:38975728-38975747 Msa0884840:intron 30.0%
! TATCATTGCTGTTGAAGTTA+GGG - chr6_1:38975729-38975748 Msa0884840:intron 30.0%
!! GTTAGGGATTTTTGGATAAA+AGG - chr6_1:38975745-38975764 Msa0884840:intron 30.0%
TTAGAAAGGAAAAAAACAGG+GGG + chr6_1:38976033-38976052 None:intergenic 30.0%
CATTGGTACAACTATTAGAA+AGG + chr6_1:38976047-38976066 None:intergenic 30.0%
!! TTGTACCAATGTTTTTCAAC+TGG - chr6_1:38976056-38976075 Msa0884840:intron 30.0%
TTAAGCTTACAGAAATTAGG+GGG - chr6_1:38976099-38976118 Msa0884840:intron 30.0%
TCAACTATATTCCATCGTAT+AGG - chr6_1:38976183-38976202 Msa0884840:intron 30.0%
ATTGTCTTAGAAATTGTGGT+TGG - chr6_1:38976316-38976335 Msa0884840:intron 30.0%
TTGTCTTAGAAATTGTGGTT+GGG - chr6_1:38976317-38976336 Msa0884840:intron 30.0%
!! GTGTGTTCTTTTATTTATGC+AGG - chr6_1:38976516-38976535 Msa0884840:intron 30.0%
CTAGTGTTTACATGATTGAT+TGG - chr6_1:38976614-38976633 Msa0884840:intron 30.0%
CATTCCATAAATTTCTGATC+CGG + chr6_1:38976982-38977001 None:intergenic 30.0%
! AACAGACTAATTTGCATCAA+TGG + chr6_1:38977144-38977163 None:intergenic 30.0%
TACAATAATGAAGCAAGCAA+TGG - chr6_1:38977390-38977409 Msa0884840:intron 30.0%
CTCTCCTAAAGGATAAATTT+GGG + chr6_1:38977679-38977698 None:intergenic 30.0%
TCTCTCCTAAAGGATAAATT+TGG + chr6_1:38977680-38977699 None:intergenic 30.0%
AAATCAATTCTCTCTCCTAA+AGG + chr6_1:38977690-38977709 None:intergenic 30.0%
TTGATTGCTAGTTACAGAAA+AGG - chr6_1:38977725-38977744 Msa0884840:intron 30.0%
CAAATCTGAATCTCTAGTTA+TGG + chr6_1:38977888-38977907 None:intergenic 30.0%
GCATTATTATTCGTTATCTG+TGG - chr6_1:38977961-38977980 Msa0884840:intron 30.0%
! ATATGGTTCTATACAAGATG+TGG - chr6_1:38977994-38978013 Msa0884840:intron 30.0%
TACAGTAATCAAACGGTAAA+TGG + chr6_1:38978090-38978109 None:intergenic 30.0%
GATGAACAGTGAATTTATCT+AGG + chr6_1:38978153-38978172 None:intergenic 30.0%
!! TATTACACAGTTGTTTCTCT+AGG + chr6_1:38978271-38978290 None:intergenic 30.0%
!! CAGAGAGCATAATTTTTAAC+AGG + chr6_1:38978385-38978404 None:intergenic 30.0%
! GTTTACTATTGCTATTGTAG+GGG - chr6_1:38978414-38978433 Msa0884840:intron 30.0%
! GATGGCAAATTAGCTTATTT+AGG - chr6_1:38978665-38978684 Msa0884840:intron 30.0%
AATACGAATTAGCAAACATC+GGG + chr6_1:38978724-38978743 None:intergenic 30.0%
! ATCCTTGGCATTTATTCTTT+TGG - chr6_1:38978754-38978773 Msa0884840:intron 30.0%
TATTATGCATTGCTCTAGTT+TGG - chr6_1:38979000-38979019 Msa0884840:intron 30.0%
!!! CTTTTTATCTGGTAATGGTT+TGG - chr6_1:38979070-38979089 Msa0884840:intron 30.0%
! ATTTGTTTGGTTCAAACAGT+TGG - chr6_1:38979134-38979153 Msa0884840:CDS 30.0%
GAATGCTCACATTATGAAAT+AGG - chr6_1:38979161-38979180 Msa0884840:CDS 30.0%
TAGACAGCCTAATTTATGTT+TGG - chr6_1:38979203-38979222 Msa0884840:CDS 30.0%
TCTAGAAGATATATCTAAGG+AGG - chr6_1:38979270-38979289 Msa0884840:intron 30.0%
! CATCTTGTAAATCGTGATTT+TGG - chr6_1:38979415-38979434 Msa0884840:intron 30.0%
ACAAATAAGCAATAAGCCTT+TGG + chr6_1:38980020-38980039 None:intergenic 30.0%
! ATAACAAGTGAGAAGTATGA+AGG + chr6_1:38980124-38980143 None:intergenic 30.0%
AAGACAAAAGAAAGAATAGG+GGG + chr6_1:38980623-38980642 None:intergenic 30.0%
AATTGCTCATTTCAAACAGA+AGG + chr6_1:38980785-38980804 None:intergenic 30.0%
ATGAGCAATTTAAGCTTCAT+TGG - chr6_1:38980795-38980814 Msa0884840:intron 30.0%
!! CTTTAAAACCTGTCCTAATA+AGG - chr6_1:38980885-38980904 Msa0884840:intron 30.0%
!! TACTAAGGTCTTATCTGTTT+TGG + chr6_1:38980932-38980951 None:intergenic 30.0%
TACAGATGGTATCTTTACTA+AGG + chr6_1:38980947-38980966 None:intergenic 30.0%
TTAGTAAAGATACCATCTGT+AGG - chr6_1:38980946-38980965 Msa0884840:intron 30.0%
AGATTCGAAAATGGTTATGA+AGG - chr6_1:38980972-38980991 Msa0884840:intron 30.0%
CTTTCATGATAATTGTTGCA+GGG - chr6_1:38981093-38981112 Msa0884840:intron 30.0%
AATTGTTCAAGAATTTGCCA+AGG - chr6_1:38981134-38981153 Msa0884840:intron 30.0%
AAGAAAGAAGGATCTAATGA+AGG + chr6_1:38981217-38981236 None:intergenic 30.0%
!! AGCAAATTTTAACACTCAGA+GGG + chr6_1:38981256-38981275 None:intergenic 30.0%
!! AAGCAAATTTTAACACTCAG+AGG + chr6_1:38981257-38981276 None:intergenic 30.0%
TTTGCTTTCAATCCAAATGT+AGG - chr6_1:38981270-38981289 Msa0884840:intron 30.0%
TTGCTTTCAATCCAAATGTA+GGG - chr6_1:38981271-38981290 Msa0884840:intron 30.0%
ATATCTTCTTCGGTCATTAA+AGG + chr6_1:38981370-38981389 None:intergenic 30.0%
! ATTGAAGTCTTCTTTTCTTC+TGG + chr6_1:38981440-38981459 None:intergenic 30.0%
TCATGTAAGAACCATATTTC+CGG + chr6_1:38981549-38981568 None:intergenic 30.0%
! ACTAACTTTTACCCAAAACA+AGG - chr6_1:38981601-38981620 Msa0884840:intron 30.0%
! CTAACTTTTACCCAAAACAA+GGG - chr6_1:38981602-38981621 Msa0884840:intron 30.0%
!!! TAGGATTTTTCCCTTGTTTT+GGG + chr6_1:38981615-38981634 None:intergenic 30.0%
!! TTAGGATTTTTCCCTTGTTT+TGG + chr6_1:38981616-38981635 None:intergenic 30.0%
!! TGTAAACTTCTAAAGCTTCT+AGG - chr6_1:38981685-38981704 Msa0884840:intron 30.0%
ACTCATAAACACATTGCAAT+GGG + chr6_1:38981804-38981823 None:intergenic 30.0%
TACTCATAAACACATTGCAA+TGG + chr6_1:38981805-38981824 None:intergenic 30.0%
CAATTGAAATAATTGCTGCT+GGG + chr6_1:38982215-38982234 None:intergenic 30.0%
!!! AAAAGGGTGTTTTTGTGATA+TGG - chr6_1:38982286-38982305 Msa0884840:intron 30.0%
AAAACCAACAGAAAAAGCAA+AGG + chr6_1:38982484-38982503 None:intergenic 30.0%
!! TTGGTTTTCATGTGATGATT+AGG - chr6_1:38982496-38982515 Msa0884840:CDS 30.0%
AAATTGGTGTACCTAAAGAG+AGG + chr6_1:38971907-38971926 None:intergenic 35.0%
GGTACACCAATTTCTTTGTT+TGG - chr6_1:38971914-38971933 Msa0884840:three_prime_UTR 35.0%
! TATGCATCACTTGTTGGATA+AGG - chr6_1:38971986-38972005 Msa0884840:three_prime_UTR 35.0%
GTAAGTATTTATCGATGTGG+TGG - chr6_1:38972008-38972027 Msa0884840:three_prime_UTR 35.0%
!! TTAGATCATAATGGGTGTGT+GGG + chr6_1:38972275-38972294 None:intergenic 35.0%
!! ATTAGATCATAATGGGTGTG+TGG + chr6_1:38972276-38972295 None:intergenic 35.0%
GCCCATAAATTTGCATGATA+AGG - chr6_1:38972771-38972790 Msa0884840:intron 35.0%
GCCCTTATCATGCAAATTTA+TGG + chr6_1:38972776-38972795 None:intergenic 35.0%
! AAAGCACTATAAAATGTCGC+TGG - chr6_1:38972918-38972937 Msa0884840:intron 35.0%
ATGCAATAGGCTACAAGATA+AGG - chr6_1:38973207-38973226 Msa0884840:intron 35.0%
AACTAGAAACAACTCTCTGT+AGG - chr6_1:38973325-38973344 Msa0884840:CDS 35.0%
!! GTTGTTTTCATAAGCCATCT+TGG + chr6_1:38973639-38973658 None:intergenic 35.0%
GACATGTTCATAAGCTCTTT+AGG - chr6_1:38973785-38973804 Msa0884840:intron 35.0%
!! ATGATTTGTTGCTGTTAGCA+TGG - chr6_1:38973871-38973890 Msa0884840:intron 35.0%
TAACAAATCACTGCTTTCGT+AGG + chr6_1:38973912-38973931 None:intergenic 35.0%
AAATAACCAGAATGGCATAC+CGG + chr6_1:38974067-38974086 None:intergenic 35.0%
ATGTACTCTATCCTCAAACT+AGG - chr6_1:38974113-38974132 Msa0884840:CDS 35.0%
ATTCTGTGACATATCTGAGA+TGG + chr6_1:38974196-38974215 None:intergenic 35.0%
TAAAAACCCTAGTTATGAGG+AGG - chr6_1:38974570-38974589 Msa0884840:intron 35.0%
AAAAACCCTAGTTATGAGGA+GGG - chr6_1:38974571-38974590 Msa0884840:intron 35.0%
TGTAGTTAGTATTATTCCGG+CGG - chr6_1:38974640-38974659 Msa0884840:CDS 35.0%
! TTTGGAGCACACTTTAAGAA+GGG - chr6_1:38974766-38974785 Msa0884840:intron 35.0%
CATTTGAGCATAACATGTAC+AGG + chr6_1:38975093-38975112 None:intergenic 35.0%
AAAGCAACTTCTGTGGAAAA+TGG + chr6_1:38975269-38975288 None:intergenic 35.0%
! CTCTGAGAAAATTTCAGACA+AGG + chr6_1:38975321-38975340 None:intergenic 35.0%
!!! GTTCATACTTTTGGCCTTAT+TGG - chr6_1:38975380-38975399 Msa0884840:intron 35.0%
TCTCAAAACTCAGCAAACAA+CGG + chr6_1:38975419-38975438 None:intergenic 35.0%
GAAATTAGAACTTCTGTCTC+TGG - chr6_1:38975477-38975496 Msa0884840:intron 35.0%
ACGCAAGATCAAAATGTCAA+GGG + chr6_1:38975589-38975608 None:intergenic 35.0%
AACGCAAGATCAAAATGTCA+AGG + chr6_1:38975590-38975609 None:intergenic 35.0%
AGGGTATGTTAACAGCAAAA+TGG - chr6_1:38975705-38975724 Msa0884840:intron 35.0%
! CTGTTGAAGTTAGGGATTTT+TGG - chr6_1:38975737-38975756 Msa0884840:intron 35.0%
!! TTTTACACGAGGTTGTTTTC+AGG + chr6_1:38975907-38975926 None:intergenic 35.0%
AACAACCTCGTGTAAAAAAC+AGG - chr6_1:38975910-38975929 Msa0884840:intron 35.0%
ACAACCTCGTGTAAAAAACA+GGG - chr6_1:38975911-38975930 Msa0884840:intron 35.0%
CATACAATTCACCAAATGGT+GGG - chr6_1:38975942-38975961 Msa0884840:intron 35.0%
TAGAAAGGAAAAAAACAGGG+GGG + chr6_1:38976032-38976051 None:intergenic 35.0%
GTCATCCAGTTGAAAAACAT+TGG + chr6_1:38976064-38976083 None:intergenic 35.0%
CAACGAAAATACCTATACGA+TGG + chr6_1:38976197-38976216 None:intergenic 35.0%
CTCAACAAAGTGATGTGATA+TGG + chr6_1:38976497-38976516 None:intergenic 35.0%
!!! ATCATGGTCTTCTTGTTTTC+TGG - chr6_1:38976716-38976735 Msa0884840:intron 35.0%
!!! TCATGGTCTTCTTGTTTTCT+GGG - chr6_1:38976717-38976736 Msa0884840:intron 35.0%
!! AAACTCAGAAGTACTAGTCA+AGG - chr6_1:38976816-38976835 Msa0884840:intron 35.0%
AGTGAATAACTTCTTGTGTC+CGG - chr6_1:38976960-38976979 Msa0884840:intron 35.0%
AAACTGGTGAAGAAAAAGAG+AGG + chr6_1:38977224-38977243 None:intergenic 35.0%
! TTTGAAGTTCTGTCCTTGAA+AGG - chr6_1:38977452-38977471 Msa0884840:intron 35.0%
AAAACAGGTTCAACCTTTCA+AGG + chr6_1:38977468-38977487 None:intergenic 35.0%
TTTCAAAGTTGTACCACGTA+TGG - chr6_1:38977485-38977504 Msa0884840:intron 35.0%
GAAAGAGGTCCTATAAAAAG+AGG - chr6_1:38977805-38977824 Msa0884840:intron 35.0%
ATTATTCGTTATCTGTGGAC+AGG - chr6_1:38977966-38977985 Msa0884840:intron 35.0%
!! TCTAGGGTATTGAATCTATG+TGG + chr6_1:38978136-38978155 None:intergenic 35.0%
TGTAGGATATAGACCCAAAA+AGG + chr6_1:38978331-38978350 None:intergenic 35.0%
GAGAAAGTTGTCAGAAGTAA+AGG - chr6_1:38978436-38978455 Msa0884840:intron 35.0%
AAAGGATCTTTACCTGATTG+AGG - chr6_1:38978454-38978473 Msa0884840:intron 35.0%
TTTCAAAGATGACCTCAATC+AGG + chr6_1:38978469-38978488 None:intergenic 35.0%
! TTTCCTGATAATGACTAGGT+AGG - chr6_1:38978560-38978579 Msa0884840:intron 35.0%
TTCAATCAACTTCTTGAGTG+TGG - chr6_1:38978596-38978615 Msa0884840:intron 35.0%
TCAATCAACTTCTTGAGTGT+GGG - chr6_1:38978597-38978616 Msa0884840:intron 35.0%
ATGTCCTAAGAAGATTTCCA+GGG + chr6_1:38978643-38978662 None:intergenic 35.0%
AATCTTCTTAGGACATCTGA+TGG - chr6_1:38978647-38978666 Msa0884840:intron 35.0%
ATACGAATTAGCAAACATCG+GGG + chr6_1:38978723-38978742 None:intergenic 35.0%
AGCCAAAAGAATAAATGCCA+AGG + chr6_1:38978759-38978778 None:intergenic 35.0%
TTCAAACAAGAATTGCGTGA+TGG - chr6_1:38979373-38979392 Msa0884840:intron 35.0%
!! AAATCGTGATTTTGGTGCAT+TGG - chr6_1:38979423-38979442 Msa0884840:intron 35.0%
!! TTCCAAAATGCTGTTTCCAA+AGG - chr6_1:38979760-38979779 Msa0884840:intron 35.0%
GCTGTATGTGAAATACAACA+TGG - chr6_1:38979918-38979937 Msa0884840:intron 35.0%
AGCAATCCAACCTCTTTATT+AGG - chr6_1:38979960-38979979 Msa0884840:intron 35.0%
GCAATCCAACCTCTTTATTA+GGG - chr6_1:38979961-38979980 Msa0884840:intron 35.0%
ACTTTCCCTAATAAAGAGGT+TGG + chr6_1:38979969-38979988 None:intergenic 35.0%
! AGTAATTCTGGAAATAGCCA+TGG - chr6_1:38979986-38980005 Msa0884840:intron 35.0%
! GTAATTCTGGAAATAGCCAT+GGG - chr6_1:38979987-38980006 Msa0884840:intron 35.0%
CTGGTAAGGATTTCAATACA+GGG + chr6_1:38980384-38980403 None:intergenic 35.0%
AGAATCAAGATTTCATGTGC+TGG + chr6_1:38980403-38980422 None:intergenic 35.0%
! ACATACCTCTTTTGTTAGGA+TGG - chr6_1:38980512-38980531 Msa0884840:intron 35.0%
AAACACCATCCTAACAAAAG+AGG + chr6_1:38980520-38980539 None:intergenic 35.0%
TCATGAAACCTTATTAGGAC+AGG + chr6_1:38980896-38980915 None:intergenic 35.0%
GACTGTCATGAAACCTTATT+AGG + chr6_1:38980901-38980920 None:intergenic 35.0%
CCTGCAACAATTATCATGAA+AGG + chr6_1:38981095-38981114 None:intergenic 35.0%
CCTTTCATGATAATTGTTGC+AGG - chr6_1:38981092-38981111 Msa0884840:intron 35.0%
!! GCAAATTTTAACACTCAGAG+GGG + chr6_1:38981255-38981274 None:intergenic 35.0%
!!! TTGATTTTTCTTTTAGGGCC+CGG - chr6_1:38981527-38981546 Msa0884840:intron 35.0%
CATGTAAGAACCATATTTCC+GGG + chr6_1:38981548-38981567 None:intergenic 35.0%
!! ACTTCTAAAGCTTCTAGGAA+AGG - chr6_1:38981690-38981709 Msa0884840:intron 35.0%
GAAAGGCAGTAAAAACTTCA+GGG - chr6_1:38981707-38981726 Msa0884840:intron 35.0%
ACTACATTGTTACACTGCAT+AGG - chr6_1:38981765-38981784 Msa0884840:intron 35.0%
CTCATAAACACATTGCAATG+GGG + chr6_1:38981803-38981822 None:intergenic 35.0%
TACAGTATTTGATTCTGGTC+GGG + chr6_1:38981968-38981987 None:intergenic 35.0%
GTACAGTATTTGATTCTGGT+CGG + chr6_1:38981969-38981988 None:intergenic 35.0%
CCAGAATCAAATACTGTACT+CGG - chr6_1:38981970-38981989 Msa0884840:intron 35.0%
AACAGGAAGAATGTCTTGAA+TGG + chr6_1:38982029-38982048 None:intergenic 35.0%
TAGATTTACCTCAGGAATGA+CGG + chr6_1:38982056-38982075 None:intergenic 35.0%
CAAATGCTTAGATTTACCTC+AGG + chr6_1:38982064-38982083 None:intergenic 35.0%
!! AGTTGTTTTGTCAGTGTTAG+TGG + chr6_1:38982108-38982127 None:intergenic 35.0%
GTCATAAGCAATTTCACATC+TGG - chr6_1:38982130-38982149 Msa0884840:intron 35.0%
GCAATTGAAATAATTGCTGC+TGG + chr6_1:38982216-38982235 None:intergenic 35.0%
ATTTCAATTGCCAGCTAACT+TGG - chr6_1:38982225-38982244 Msa0884840:intron 35.0%
AGGTGATTGCAAAACATTTC+AGG - chr6_1:38982351-38982370 Msa0884840:intron 35.0%
!!! TGTACCTTTGCTTTTTCTGT+TGG - chr6_1:38982477-38982496 Msa0884840:CDS 35.0%
CCTGCATTCAAGCAATCTAA+AGG + chr6_1:38972088-38972107 None:intergenic 40.0%
CCTTTAGATTGCTTGAATGC+AGG - chr6_1:38972085-38972104 Msa0884840:three_prime_UTR 40.0%
!!! AGTTTTTTCAAGTCCCCATC+AGG + chr6_1:38972402-38972421 None:intergenic 40.0%
!!! AGTCTTTTTTGGTGTGGTTG+AGG - chr6_1:38972695-38972714 Msa0884840:intron 40.0%
!!! GTCTTTTTTGGTGTGGTTGA+GGG - chr6_1:38972696-38972715 Msa0884840:intron 40.0%
!!! TCTTTTTTGGTGTGGTTGAG+GGG - chr6_1:38972697-38972716 Msa0884840:intron 40.0%
GACACTGTTTGTGAGAACAT+AGG - chr6_1:38973297-38973316 Msa0884840:intron 40.0%
ACGGCAAATCAAATGTCTGA+AGG + chr6_1:38973951-38973970 None:intergenic 40.0%
TGCAGAGCTAAGGAAGATAT+TGG - chr6_1:38974030-38974049 Msa0884840:intron 40.0%
AGAGCTAAGGAAGATATTGG+TGG - chr6_1:38974033-38974052 Msa0884840:intron 40.0%
AGGAAGATATTGGTGGAACT+TGG - chr6_1:38974040-38974059 Msa0884840:intron 40.0%
GATGCATACTACTTCATTGC+AGG - chr6_1:38974343-38974362 Msa0884840:CDS 40.0%
GGCATATATCAAAATTGCGC+AGG - chr6_1:38974364-38974383 Msa0884840:intron 40.0%
AGTGGCTGATATCTCAGAAT+GGG + chr6_1:38974532-38974551 None:intergenic 40.0%
TTCTTCCCTCCTCATAACTA+GGG + chr6_1:38974579-38974598 None:intergenic 40.0%
ATCAAGTAGTATGTGACGCT+TGG + chr6_1:38974723-38974742 None:intergenic 40.0%
CTTCTTAAAGTGTGCTCCAA+AGG + chr6_1:38974767-38974786 None:intergenic 40.0%
!! CTTTGGAGCACACTTTAAGA+AGG - chr6_1:38974765-38974784 Msa0884840:intron 40.0%
! TTGGAGCACACTTTAAGAAG+GGG - chr6_1:38974767-38974786 Msa0884840:intron 40.0%
GAGAGCTCATTTAGATACGA+TGG + chr6_1:38975224-38975243 None:intergenic 40.0%
CATGTTGAAAGCAACTTCTG+TGG + chr6_1:38975276-38975295 None:intergenic 40.0%
AACTTCTGTCTCTGGATCAT+AGG - chr6_1:38975485-38975504 Msa0884840:intron 40.0%
GATCATAGGTTTATCAAGCC+AGG - chr6_1:38975499-38975518 Msa0884840:intron 40.0%
! TTGATCTTGCGTTTTATGGC+TGG - chr6_1:38975597-38975616 Msa0884840:intron 40.0%
! TGATCTTGCGTTTTATGGCT+GGG - chr6_1:38975598-38975617 Msa0884840:intron 40.0%
ATTCTAATAGTTGCCACCGA+AGG - chr6_1:38975821-38975840 Msa0884840:CDS 40.0%
TTCTAATAGTTGCCACCGAA+GGG - chr6_1:38975822-38975841 Msa0884840:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr6_1:38975867-38975886 Msa0884840:CDS 40.0%
!!! CTTACCCTGTTTTTTACACG+AGG + chr6_1:38975918-38975937 None:intergenic 40.0%
CTCGTGTAAAAAACAGGGTA+AGG - chr6_1:38975916-38975935 Msa0884840:intron 40.0%
GCTGCATACAATTCACCAAA+TGG - chr6_1:38975938-38975957 Msa0884840:intron 40.0%
GCATACAATTCACCAAATGG+TGG - chr6_1:38975941-38975960 Msa0884840:intron 40.0%
AGAAAGGAAAAAAACAGGGG+GGG + chr6_1:38976031-38976050 None:intergenic 40.0%
AATTAGGGGGCCTAATTCAT+AGG - chr6_1:38976112-38976131 Msa0884840:intron 40.0%
AACCAATGCATACCCGAAAA+AGG + chr6_1:38976567-38976586 None:intergenic 40.0%
ATGTATGGGGTGATAGTATG+TGG - chr6_1:38976692-38976711 Msa0884840:intron 40.0%
TGTATGGGGTGATAGTATGT+GGG - chr6_1:38976693-38976712 Msa0884840:intron 40.0%
GTGTCCGGATCAGAAATTTA+TGG - chr6_1:38976975-38976994 Msa0884840:intron 40.0%
GAATTAGTTGTGCTTCTGTC+AGG - chr6_1:38977001-38977020 Msa0884840:intron 40.0%
AGAAAAAGAGAGGAGAGAGA+GGG + chr6_1:38977214-38977233 None:intergenic 40.0%
AAGAAAAAGAGAGGAGAGAG+AGG + chr6_1:38977215-38977234 None:intergenic 40.0%
GTAGTGTAGAAGCAAGAAAC+TGG + chr6_1:38977240-38977259 None:intergenic 40.0%
TTGAATACAGGCTTGAATGC+AGG - chr6_1:38977359-38977378 Msa0884840:intron 40.0%
CAAGCAATGGTATCAAGTTC+AGG - chr6_1:38977403-38977422 Msa0884840:intron 40.0%
CAGGTAAGTGCATGCTATTA+AGG - chr6_1:38977422-38977441 Msa0884840:intron 40.0%
! CGTGGTACAACTTTGAAAAC+AGG + chr6_1:38977483-38977502 None:intergenic 40.0%
! TTCTAAAGGATCAGAGAGCA+GGG + chr6_1:38977546-38977565 None:intergenic 40.0%
! TTTCTAAAGGATCAGAGAGC+AGG + chr6_1:38977547-38977566 None:intergenic 40.0%
ATCAATGAGGTCCTATAACG+AGG + chr6_1:38977596-38977615 None:intergenic 40.0%
TCTGTGGACAGGAACTTATA+TGG - chr6_1:38977977-38977996 Msa0884840:intron 40.0%
! TGGTTCTATACAAGATGTGG+TGG - chr6_1:38977997-38978016 Msa0884840:intron 40.0%
GTGTACTCTGTGTACATCAA+AGG + chr6_1:38978025-38978044 None:intergenic 40.0%
AAATTCACTGTTCATCCCAG+TGG - chr6_1:38978157-38978176 Msa0884840:intron 40.0%
!! GTTCTAGCTCACAACATTAC+AGG + chr6_1:38978236-38978255 None:intergenic 40.0%
ACTCCTACCTAGTCATTATC+AGG + chr6_1:38978566-38978585 None:intergenic 40.0%
TAAGAAGATTTCCAGGGTGT+GGG + chr6_1:38978637-38978656 None:intergenic 40.0%
GATGTCCTAAGAAGATTTCC+AGG + chr6_1:38978644-38978663 None:intergenic 40.0%
ATTAGCAAACATCGGGGATT+TGG + chr6_1:38978717-38978736 None:intergenic 40.0%
GACACAAATGAACAGTGCAT+TGG - chr6_1:38979022-38979041 Msa0884840:intron 40.0%
!! ATCTGGTAATGGTTTGGGTA+AGG - chr6_1:38979076-38979095 Msa0884840:intron 40.0%
!! TCTGGTAATGGTTTGGGTAA+GGG - chr6_1:38979077-38979096 Msa0884840:intron 40.0%
! TTTGGTTCAAACAGTTGGAG+TGG - chr6_1:38979139-38979158 Msa0884840:CDS 40.0%
! AAACAATTCCCCCTACGTTT+TGG - chr6_1:38979326-38979345 Msa0884840:intron 40.0%
AAAATCTGGCCAAAACGTAG+GGG + chr6_1:38979338-38979357 None:intergenic 40.0%
CAAAATCTGGCCAAAACGTA+GGG + chr6_1:38979339-38979358 None:intergenic 40.0%
!!! TGATTTTGGTGCATTGGCTA+CGG - chr6_1:38979429-38979448 Msa0884840:intron 40.0%
AGAGAAAGAAGCCGTTACAA+AGG - chr6_1:38979573-38979592 Msa0884840:intron 40.0%
ACCTGTCAAAGCCTTTGTAA+CGG + chr6_1:38979587-38979606 None:intergenic 40.0%
CAAATAAACCTCAAGAACGG+AGG + chr6_1:38979704-38979723 None:intergenic 40.0%
TCGCTTGCATTGAACTTTGT+AGG - chr6_1:38979733-38979752 Msa0884840:intron 40.0%
!! CTCCTTTGGAAACAGCATTT+TGG + chr6_1:38979765-38979784 None:intergenic 40.0%
GCTGATATTACGAACTCCTT+TGG + chr6_1:38979779-38979798 None:intergenic 40.0%
GGAGTTCGTAATATCAGCTT+TGG - chr6_1:38979781-38979800 Msa0884840:intron 40.0%
AAGAGGTTGGATTGCTATGT+AGG + chr6_1:38979956-38979975 None:intergenic 40.0%
!! ACTTCTCACTTGTTATCCGA+AGG - chr6_1:38980128-38980147 Msa0884840:intron 40.0%
TGTATGGAAAGCTCTACCTT+CGG + chr6_1:38980147-38980166 None:intergenic 40.0%
AAGGTAGAGCTTTCCATACA+AGG - chr6_1:38980147-38980166 Msa0884840:intron 40.0%
GTACTGGAAGGAATTGCAAT+TGG - chr6_1:38980232-38980251 Msa0884840:intron 40.0%
TAACCCAGACTACAAAGTCT+TGG - chr6_1:38980258-38980277 Msa0884840:intron 40.0%
AACCCAGACTACAAAGTCTT+GGG - chr6_1:38980259-38980278 Msa0884840:intron 40.0%
TACCCAAGACTTTGTAGTCT+GGG + chr6_1:38980264-38980283 None:intergenic 40.0%
CAAAGAAGATCTAAGCTGAG+GGG + chr6_1:38980329-38980348 None:intergenic 40.0%
CCAAAGAAGATCTAAGCTGA+GGG + chr6_1:38980330-38980349 None:intergenic 40.0%
TCCAAAGAAGATCTAAGCTG+AGG + chr6_1:38980331-38980350 None:intergenic 40.0%
GCTGGTAAGGATTTCAATAC+AGG + chr6_1:38980385-38980404 None:intergenic 40.0%
! CAAGATTTCATGTGCTGGTA+AGG + chr6_1:38980398-38980417 None:intergenic 40.0%
! GACGACATACCTCTTTTGTT+AGG - chr6_1:38980508-38980527 Msa0884840:intron 40.0%
CAATGACATAAACCAGTCTG+AGG + chr6_1:38980718-38980737 None:intergenic 40.0%
!! CTCAGACTGGTTTATGTCAT+TGG - chr6_1:38980716-38980735 Msa0884840:intron 40.0%
! CAGAAGGTGGCTTTACAATT+GGG + chr6_1:38980769-38980788 None:intergenic 40.0%
! ACAGAAGGTGGCTTTACAAT+TGG + chr6_1:38980770-38980789 None:intergenic 40.0%
TGCTCATTTCAAACAGAAGG+TGG + chr6_1:38980782-38980801 None:intergenic 40.0%
!!! AGGTCTTATCTGTTTTGGCA+CGG + chr6_1:38980927-38980946 None:intergenic 40.0%
TCATGATAATTGTTGCAGGG+TGG - chr6_1:38981096-38981115 Msa0884840:intron 40.0%
GTGCATCTAAACCCTACATT+TGG + chr6_1:38981285-38981304 None:intergenic 40.0%
ATGTAGGGTTTAGATGCACT+TGG - chr6_1:38981286-38981305 Msa0884840:intron 40.0%
TGTAGGGTTTAGATGCACTT+GGG - chr6_1:38981287-38981306 Msa0884840:intron 40.0%
ATAGCAATAGCATAAGGCGT+TGG + chr6_1:38981411-38981430 None:intergenic 40.0%
GCCTTATGCTATTGCTATCA+GGG - chr6_1:38981413-38981432 Msa0884840:intron 40.0%
CCTTATGCTATTGCTATCAG+GGG - chr6_1:38981414-38981433 Msa0884840:intron 40.0%
GGAAAGGCAGTAAAAACTTC+AGG - chr6_1:38981706-38981725 Msa0884840:intron 40.0%
CAGTGTAACAATGTAGTCTG+TGG + chr6_1:38981762-38981781 None:intergenic 40.0%
TACCTTCCGTCAATGTCATA+GGG - chr6_1:38981926-38981945 Msa0884840:intron 40.0%
AATGTCATAGGGAGAGACAA+AGG - chr6_1:38981937-38981956 Msa0884840:intron 40.0%
CCGAGTACAGTATTTGATTC+TGG + chr6_1:38981973-38981992 None:intergenic 40.0%
GAATCAAATACTGTACTCGG+AGG - chr6_1:38981973-38981992 Msa0884840:intron 40.0%
ATGTAAATTTCAGCTCCCAC+CGG - chr6_1:38982186-38982205 Msa0884840:intron 40.0%
AATAATTGCTGCTGGGATTC+CGG + chr6_1:38982208-38982227 None:intergenic 40.0%
AACTGTTGAACCAAGTTAGC+TGG + chr6_1:38982238-38982257 None:intergenic 40.0%
TGCTGCGAGAACTATCAAAA+GGG - chr6_1:38982270-38982289 Msa0884840:intron 40.0%
TTAGCTCAAACCAGTGAGCA+AGG - chr6_1:38972246-38972265 Msa0884840:CDS 45.0%
ATCGGCACCTAAAATCCTGA+TGG - chr6_1:38972384-38972403 Msa0884840:intron 45.0%
TCGGCACCTAAAATCCTGAT+GGG - chr6_1:38972385-38972404 Msa0884840:intron 45.0%
! CAAGTCCCCATCAGGATTTT+AGG + chr6_1:38972394-38972413 None:intergenic 45.0%
! TTGTTGCTGTTAGCATGGAG+AGG - chr6_1:38973876-38973895 Msa0884840:intron 45.0%
GATATTGGTGGAACTTGGTC+CGG - chr6_1:38974045-38974064 Msa0884840:intron 45.0%
ATCTCAGAATGGGGTTCCTA+CGG + chr6_1:38974522-38974541 None:intergenic 45.0%
GTGGCTGATATCTCAGAATG+GGG + chr6_1:38974531-38974550 None:intergenic 45.0%
CAGTGGCTGATATCTCAGAA+TGG + chr6_1:38974533-38974552 None:intergenic 45.0%
GTTCTTCCCTCCTCATAACT+AGG + chr6_1:38974580-38974599 None:intergenic 45.0%
AGTTAGTATTATTCCGGCGG+TGG - chr6_1:38974643-38974662 Msa0884840:CDS 45.0%
TGAAGGAGTAAGTAGGTTCG+GGG + chr6_1:38974677-38974696 None:intergenic 45.0%
GTGAAGGAGTAAGTAGGTTC+GGG + chr6_1:38974678-38974697 None:intergenic 45.0%
GGTGAAGGAGTAAGTAGGTT+CGG + chr6_1:38974679-38974698 None:intergenic 45.0%
! TGAGGTTGGTTAGATGGTTG+GGG + chr6_1:38974700-38974719 None:intergenic 45.0%
! GTGAGGTTGGTTAGATGGTT+GGG + chr6_1:38974701-38974720 None:intergenic 45.0%
! TGGAGCACACTTTAAGAAGG+GGG - chr6_1:38974768-38974787 Msa0884840:intron 45.0%
! ATATGCTGTTAAGGGCTAGC+AGG - chr6_1:38975055-38975074 Msa0884840:CDS 45.0%
! CTTGGGCAGGTTCATACTTT+TGG - chr6_1:38975371-38975390 Msa0884840:intron 45.0%
GCTGTTAAAGTGCAAAGACC+AGG - chr6_1:38975546-38975565 Msa0884840:intron 45.0%
GAAATTGCAGCTTGAACACC+TGG + chr6_1:38975567-38975586 None:intergenic 45.0%
TCTAATAGTTGCCACCGAAG+GGG - chr6_1:38975823-38975842 Msa0884840:CDS 45.0%
TCATGTGACTGAAAGGTCAC+AGG - chr6_1:38975874-38975893 Msa0884840:intron 45.0%
AAAGGAAAAAAACAGGGGGG+GGG + chr6_1:38976029-38976048 None:intergenic 45.0%
GAAAGGAAAAAAACAGGGGG+GGG + chr6_1:38976030-38976049 None:intergenic 45.0%
!! GGCATGAGTGTTGATGAGAT+AGG + chr6_1:38976411-38976430 None:intergenic 45.0%
! AGTGGGCATCAAGCCTTTTT+CGG - chr6_1:38976551-38976570 Msa0884840:intron 45.0%
!!! AGCCTTTTTCGGGTATGCAT+TGG - chr6_1:38976562-38976581 Msa0884840:intron 45.0%
GGTGATAGTATGTGGGATCA+TGG - chr6_1:38976700-38976719 Msa0884840:intron 45.0%
AAAAAGAGAGGAGAGAGAGG+GGG + chr6_1:38977212-38977231 None:intergenic 45.0%
GAAAAAGAGAGGAGAGAGAG+GGG + chr6_1:38977213-38977232 None:intergenic 45.0%
TACCACGTATGGTCTGAAAG+TGG - chr6_1:38977496-38977515 Msa0884840:intron 45.0%
ATCCACTTTCAGACCATACG+TGG + chr6_1:38977501-38977520 None:intergenic 45.0%
CCTCAATCCATTCCATGACA+AGG + chr6_1:38978060-38978079 None:intergenic 45.0%
!! CCTTGTCATGGAATGGATTG+AGG - chr6_1:38978057-38978076 Msa0884840:intron 45.0%
CCATCTCATGTATTGCCACT+GGG + chr6_1:38978175-38978194 None:intergenic 45.0%
TCCATCTCATGTATTGCCAC+TGG + chr6_1:38978176-38978195 None:intergenic 45.0%
GTGGCAATACATGAGATGGA+CGG - chr6_1:38978176-38978195 Msa0884840:intron 45.0%
CTAGCTCACAACATTACAGG+AGG + chr6_1:38978233-38978252 None:intergenic 45.0%
! AAAGGCACGCCGTATCAATT+TGG + chr6_1:38978313-38978332 None:intergenic 45.0%
! ATTGATACGGCGTGCCTTTT+TGG - chr6_1:38978314-38978333 Msa0884840:intron 45.0%
! TTGATACGGCGTGCCTTTTT+GGG - chr6_1:38978315-38978334 Msa0884840:intron 45.0%
CTAAGAAGATTTCCAGGGTG+TGG + chr6_1:38978638-38978657 None:intergenic 45.0%
CACACCCTGGAAATCTTCTT+AGG - chr6_1:38978636-38978655 Msa0884840:intron 45.0%
!! CTGGTAATGGTTTGGGTAAG+GGG - chr6_1:38979078-38979097 Msa0884840:intron 45.0%
AAATCTGGCCAAAACGTAGG+GGG + chr6_1:38979337-38979356 None:intergenic 45.0%
CCAAAATCTGGCCAAAACGT+AGG + chr6_1:38979340-38979359 None:intergenic 45.0%
!! CCTACGTTTTGGCCAGATTT+TGG - chr6_1:38979337-38979356 Msa0884840:intron 45.0%
TCACCTGTCATGCCAAAATC+TGG + chr6_1:38979352-38979371 None:intergenic 45.0%
CTACGGACTTTGTCACTCTT+GGG - chr6_1:38979446-38979465 Msa0884840:intron 45.0%
TTAGCATTCCTCCGTTCTTG+AGG - chr6_1:38979693-38979712 Msa0884840:intron 45.0%
!! TATCAGCTTTGGAGACCTTC+TGG - chr6_1:38979792-38979811 Msa0884840:intron 45.0%
!! ATCAGCTTTGGAGACCTTCT+GGG - chr6_1:38979793-38979812 Msa0884840:intron 45.0%
TTGTTCCTAAGTCTCCCAGA+AGG + chr6_1:38979810-38979829 None:intergenic 45.0%
GTATCAGCGAAGAGCTTACA+TGG + chr6_1:38979833-38979852 None:intergenic 45.0%
CAATTCCTTCCAGTACAGCA+AGG + chr6_1:38980228-38980247 None:intergenic 45.0%
CTACCCAAGACTTTGTAGTC+TGG + chr6_1:38980265-38980284 None:intergenic 45.0%
TCTTGGGTAGTACTTACCCA+TGG - chr6_1:38980275-38980294 Msa0884840:intron 45.0%
!! GCACTTTTCTGGCAATCCAT+GGG + chr6_1:38980294-38980313 None:intergenic 45.0%
!! AGCACTTTTCTGGCAATCCA+TGG + chr6_1:38980295-38980314 None:intergenic 45.0%
! GCTGTCAGTAAGCACTTTTC+TGG + chr6_1:38980305-38980324 None:intergenic 45.0%
CCCTCAGCTTAGATCTTCTT+TGG - chr6_1:38980327-38980346 Msa0884840:intron 45.0%
CTGTCAGCAAAGACTCAAGT+CGG + chr6_1:38980553-38980572 None:intergenic 45.0%
ACTTGAGTCTTTGCTGACAG+AGG - chr6_1:38980553-38980572 Msa0884840:intron 45.0%
GAGGATGAAAATCGAGTCTG+AGG + chr6_1:38980699-38980718 None:intergenic 45.0%
! CTCGATTTTCATCCTCAGAC+TGG - chr6_1:38980703-38980722 Msa0884840:intron 45.0%
TGTAGGCGCAGATTCGAAAA+TGG - chr6_1:38980963-38980982 Msa0884840:intron 45.0%
!! CAATAGCATAAGGCGTTGGA+AGG + chr6_1:38981407-38981426 None:intergenic 45.0%
CGCCTTATGCTATTGCTATC+AGG - chr6_1:38981412-38981431 Msa0884840:intron 45.0%
CCCCTGATAGCAATAGCATA+AGG + chr6_1:38981417-38981436 None:intergenic 45.0%
!!! TCTTTTAGGGCCCGGAAATA+TGG - chr6_1:38981535-38981554 Msa0884840:intron 45.0%
GTACCTTCCGTCAATGTCAT+AGG - chr6_1:38981925-38981944 Msa0884840:intron 45.0%
GTCTCTCCCTATGACATTGA+CGG + chr6_1:38981935-38981954 None:intergenic 45.0%
! TCAGGAATGACGGAAAGAAC+AGG + chr6_1:38982046-38982065 None:intergenic 45.0%
TGTTCTTTCCGTCATTCCTG+AGG - chr6_1:38982045-38982064 Msa0884840:intron 45.0%
CTGCTGCGAGAACTATCAAA+AGG - chr6_1:38982269-38982288 Msa0884840:intron 45.0%
!! TTACAAAATATTAAAAAAAA+TGG + chr6_1:38972308-38972327 None:intergenic 5.0%
!!! TTTTTAAAGTTTTTTAATAA+AGG + chr6_1:38972877-38972896 None:intergenic 5.0%
CGGCACCTAAAATCCTGATG+GGG - chr6_1:38972386-38972405 Msa0884840:intron 50.0%
ATGTGCACTTGGCTACATCC+TGG - chr6_1:38972636-38972655 Msa0884840:intron 50.0%
AGGTTAGAGCTGCAGAGCTA+AGG - chr6_1:38974020-38974039 Msa0884840:intron 50.0%
TCATATGTCAGCGCTTCCGT+AGG - chr6_1:38974503-38974522 Msa0884840:intron 50.0%
GTTGGGGTGAAGGAGTAAGT+AGG + chr6_1:38974684-38974703 None:intergenic 50.0%
TGGTTAGATGGTTGGGGTGA+AGG + chr6_1:38974694-38974713 None:intergenic 50.0%
! GGTGAGGTTGGTTAGATGGT+TGG + chr6_1:38974702-38974721 None:intergenic 50.0%
! GCTTGGTGAGGTTGGTTAGA+TGG + chr6_1:38974706-38974725 None:intergenic 50.0%
! TATGTGACGCTTGGTGAGGT+TGG + chr6_1:38974714-38974733 None:intergenic 50.0%
! GTAGTATGTGACGCTTGGTG+AGG + chr6_1:38974718-38974737 None:intergenic 50.0%
! CACACTTTAAGAAGGGGGAC+AGG - chr6_1:38974773-38974792 Msa0884840:intron 50.0%
! TTAAGGGCTAGCAGGTGGTT+CGG - chr6_1:38975063-38975082 Msa0884840:CDS 50.0%
! CTGTTGCTGCTGCTTCTCTT+GGG - chr6_1:38975354-38975373 Msa0884840:intron 50.0%
CTAATAGTTGCCACCGAAGG+GGG - chr6_1:38975824-38975843 Msa0884840:CDS 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr6_1:38975852-38975871 None:intergenic 50.0%
ACAAAGCTCCGTGATACCCA+GGG + chr6_1:38975981-38976000 None:intergenic 50.0%
! TATCACGGAGCTTTGTGCAC+CGG - chr6_1:38975985-38976004 Msa0884840:intron 50.0%
AAGGAAAAAAACAGGGGGGG+GGG + chr6_1:38976028-38976047 None:intergenic 50.0%
! GTGGGCATCAAGCCTTTTTC+GGG - chr6_1:38976552-38976571 Msa0884840:intron 50.0%
ACAGGCTTGAATGCAGGAGA+TGG - chr6_1:38977365-38977384 Msa0884840:intron 50.0%
CTACCTCCATGCCTCGTTAT+AGG - chr6_1:38977582-38977601 Msa0884840:intron 50.0%
TGAGGTCCTATAACGAGGCA+TGG + chr6_1:38977591-38977610 None:intergenic 50.0%
CACAGAGTACACAACTCGCA+AGG - chr6_1:38978033-38978052 Msa0884840:intron 50.0%
AACTCGCAAGGTCCTTGTCA+TGG - chr6_1:38978045-38978064 Msa0884840:intron 50.0%
GCAAGGTCCTTGTCATGGAA+TGG - chr6_1:38978050-38978069 Msa0884840:intron 50.0%
CCCAGTGGCAATACATGAGA+TGG - chr6_1:38978172-38978191 Msa0884840:intron 50.0%
!! TGGCCAGATTTTGGCATGAC+AGG - chr6_1:38979346-38979365 Msa0884840:intron 50.0%
GCTACGGACTTTGTCACTCT+TGG - chr6_1:38979445-38979464 Msa0884840:intron 50.0%
GCTTCTTTCTCTGCAGTTGG+TGG + chr6_1:38979565-38979584 None:intergenic 50.0%
ACGGCTTCTTTCTCTGCAGT+TGG + chr6_1:38979568-38979587 None:intergenic 50.0%
! GCCGTTACAAAGGCTTTGAC+AGG - chr6_1:38979583-38979602 Msa0884840:intron 50.0%
! TTCTGGAAATAGCCATGGGC+AGG - chr6_1:38979991-38980010 Msa0884840:intron 50.0%
! TGTCTGTAGCCTTGCTGTAC+TGG - chr6_1:38980216-38980235 Msa0884840:intron 50.0%
! TGTAGCCTTGCTGTACTGGA+AGG - chr6_1:38980220-38980239 Msa0884840:intron 50.0%
TTCGAATCTGCGCCTACAGA+TGG + chr6_1:38980961-38980980 None:intergenic 50.0%
! TGTTGCAGGGTGGATTTGTG+AGG - chr6_1:38981106-38981125 Msa0884840:intron 50.0%
! TCTTGCAGCAGCTGTTTCCA+AGG + chr6_1:38981320-38981339 None:intergenic 50.0%
CTCCCTATGACATTGACGGA+AGG + chr6_1:38981931-38981950 None:intergenic 50.0%
CTTGGTCCGGTATGCCATTC+TGG - chr6_1:38974058-38974077 Msa0884840:intron 55.0%
! TGCTGTTAAGGGCTAGCAGG+TGG - chr6_1:38975058-38975077 Msa0884840:CDS 55.0%
AGAAGCAGCAGCAACAGGCT+CGG + chr6_1:38975351-38975370 None:intergenic 55.0%
CCAAGAGAAGCAGCAGCAAC+AGG + chr6_1:38975356-38975375 None:intergenic 55.0%
! CCTGTTGCTGCTGCTTCTCT+TGG - chr6_1:38975353-38975372 Msa0884840:intron 55.0%
! CTTGCGTTTTATGGCTGGGC+TGG - chr6_1:38975602-38975621 Msa0884840:intron 55.0%
GATACCCAGGGTTCGGGAAA+GGG + chr6_1:38975969-38975988 None:intergenic 55.0%
TGATACCCAGGGTTCGGGAA+AGG + chr6_1:38975970-38975989 None:intergenic 55.0%
TTCCCGAACCCTGGGTATCA+CGG - chr6_1:38975970-38975989 Msa0884840:intron 55.0%
CACAAAGCTCCGTGATACCC+AGG + chr6_1:38975982-38976001 None:intergenic 55.0%
! ATCACGGAGCTTTGTGCACC+GGG - chr6_1:38975986-38976005 Msa0884840:intron 55.0%
AGGAAAAAAACAGGGGGGGG+GGG + chr6_1:38976027-38976046 None:intergenic 55.0%
TGCAGGCAGTTGTCGATGAG+TGG - chr6_1:38976533-38976552 Msa0884840:intron 55.0%
GCAGGCAGTTGTCGATGAGT+GGG - chr6_1:38976534-38976553 Msa0884840:intron 55.0%
GGTCCTATAACGAGGCATGG+AGG + chr6_1:38977588-38977607 None:intergenic 55.0%
TATCATGCAGACCCACACCC+TGG - chr6_1:38978623-38978642 Msa0884840:intron 55.0%
! GGAGACCTTCTGGGAGACTT+AGG - chr6_1:38979802-38979821 Msa0884840:intron 55.0%
! TGCACTTGGGCTTGCTTCCT+TGG - chr6_1:38981300-38981319 Msa0884840:intron 55.0%
ATTGCTGCTGGGATTCCGGT+GGG + chr6_1:38982204-38982223 None:intergenic 55.0%
AATTGCTGCTGGGATTCCGG+TGG + chr6_1:38982205-38982224 None:intergenic 55.0%
TGATAGTTCTCGCAGCAGCG+CGG + chr6_1:38982267-38982286 None:intergenic 55.0%
! GTGTGGGCTACCTTGCTCAC+TGG + chr6_1:38972259-38972278 None:intergenic 60.0%
GAAGCAGCAGCAACAGGCTC+GGG + chr6_1:38975350-38975369 None:intergenic 60.0%
! TGCTGCTGCTTCTCTTGGGC+AGG - chr6_1:38975358-38975377 Msa0884840:intron 60.0%
CAAGCCAGGCTTCGCAGAAC+AGG - chr6_1:38975513-38975532 Msa0884840:intron 60.0%
CTGTCCTGTTCTGCGAAGCC+TGG + chr6_1:38975520-38975539 None:intergenic 60.0%
CAGGCTTCGCAGAACAGGAC+AGG - chr6_1:38975518-38975537 Msa0884840:intron 60.0%
!! GCTGGGCTGGCTAAAAGAGC+AGG - chr6_1:38975615-38975634 Msa0884840:intron 60.0%
TTGCGCCAAGGTTCCCCCTT+CGG + chr6_1:38975840-38975859 None:intergenic 60.0%
AAGGGGGAACCTTGGCGCAA+CGG - chr6_1:38975840-38975859 Msa0884840:CDS 60.0%
CGGGAAAGGGTCCCACCATT+TGG + chr6_1:38975956-38975975 None:intergenic 60.0%
CTCCGTGATACCCAGGGTTC+GGG + chr6_1:38975975-38975994 None:intergenic 60.0%
GCTCCGTGATACCCAGGGTT+CGG + chr6_1:38975976-38975995 None:intergenic 60.0%
AAAAAAACAGGGGGGGGGGG+GGG + chr6_1:38976024-38976043 None:intergenic 60.0%
GAAAAAAACAGGGGGGGGGG+GGG + chr6_1:38976025-38976044 None:intergenic 60.0%
GGAAAAAAACAGGGGGGGGG+GGG + chr6_1:38976026-38976045 None:intergenic 60.0%
AGCCATGGGCAGGACACCAA+AGG - chr6_1:38980001-38980020 Msa0884840:intron 60.0%
!! AGCCTTTGGTGTCCTGCCCA+TGG + chr6_1:38980006-38980025 None:intergenic 60.0%
GATAGTTCTCGCAGCAGCGC+GGG + chr6_1:38982266-38982285 None:intergenic 60.0%
TGCCACCGAAGGGGGAACCT+TGG - chr6_1:38975832-38975851 Msa0884840:CDS 65.0%
TGGGACCCTTTCCCGAACCC+TGG - chr6_1:38975961-38975980 Msa0884840:intron 65.0%
GGGACCCTTTCCCGAACCCT+GGG - chr6_1:38975962-38975981 Msa0884840:intron 65.0%
AAAAAACAGGGGGGGGGGGG+GGG + chr6_1:38976023-38976042 None:intergenic 65.0%
CGCCAAGGTTCCCCCTTCGG+TGG + chr6_1:38975837-38975856 None:intergenic 70.0%
AAAAACAGGGGGGGGGGGGG+GGG + chr6_1:38976022-38976041 None:intergenic 70.0%
CGGGGTTCGATCGCCACCGC+CGG + chr6_1:38974659-38974678 None:intergenic 75.0%
AAAACAGGGGGGGGGGGGGG+GGG + chr6_1:38976021-38976040 None:intergenic 75.0%
! AAACAGGGGGGGGGGGGGGG+GGG + chr6_1:38976020-38976039 None:intergenic 80.0%
! AACAGGGGGGGGGGGGGGGG+GGG + chr6_1:38976019-38976038 None:intergenic 85.0%
! ACAGGGGGGGGGGGGGGGGG+GGG + chr6_1:38976018-38976037 None:intergenic 90.0%
! GGGGGGGGGGGGGGGCAGCC+CGG + chr6_1:38976007-38976026 None:intergenic 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr6_1:38976016-38976035 None:intergenic 95.0%
! CAGGGGGGGGGGGGGGGGGG+GGG + chr6_1:38976017-38976036 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 38971844 38982621 38971844 ID=Msa0884840;Name=Msa0884840
chr6_1 mRNA 38971844 38982621 38971844 ID=Msa0884840-mRNA-1;Parent=Msa0884840;Name=Msa0884840-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.85|0.85|0.90|0.9|0.95|21|318|603
chr6_1 exon 38971844 38972266 38971844 ID=Msa0884840-mRNA-1:exon:9038;Parent=Msa0884840-mRNA-1
chr6_1 exon 38972399 38972518 38972399 ID=Msa0884840-mRNA-1:exon:9037;Parent=Msa0884840-mRNA-1
chr6_1 exon 38973003 38973173 38973003 ID=Msa0884840-mRNA-1:exon:9036;Parent=Msa0884840-mRNA-1
chr6_1 exon 38973310 38973351 38973310 ID=Msa0884840-mRNA-1:exon:9035;Parent=Msa0884840-mRNA-1
chr6_1 exon 38973442 38973546 38973442 ID=Msa0884840-mRNA-1:exon:9034;Parent=Msa0884840-mRNA-1
chr6_1 exon 38973891 38973935 38973891 ID=Msa0884840-mRNA-1:exon:9033;Parent=Msa0884840-mRNA-1
chr6_1 exon 38974099 38974240 38974099 ID=Msa0884840-mRNA-1:exon:9032;Parent=Msa0884840-mRNA-1
chr6_1 exon 38974316 38974366 38974316 ID=Msa0884840-mRNA-1:exon:9031;Parent=Msa0884840-mRNA-1
chr6_1 exon 38974632 38974710 38974632 ID=Msa0884840-mRNA-1:exon:9030;Parent=Msa0884840-mRNA-1
chr6_1 exon 38974861 38974910 38974861 ID=Msa0884840-mRNA-1:exon:9029;Parent=Msa0884840-mRNA-1
chr6_1 exon 38974998 38975112 38974998 ID=Msa0884840-mRNA-1:exon:9028;Parent=Msa0884840-mRNA-1
chr6_1 exon 38975779 38975887 38975779 ID=Msa0884840-mRNA-1:exon:9027;Parent=Msa0884840-mRNA-1
chr6_1 exon 38976387 38976477 38976387 ID=Msa0884840-mRNA-1:exon:9026;Parent=Msa0884840-mRNA-1
chr6_1 exon 38977041 38977084 38977041 ID=Msa0884840-mRNA-1:exon:9025;Parent=Msa0884840-mRNA-1
chr6_1 exon 38977892 38977927 38977892 ID=Msa0884840-mRNA-1:exon:9024;Parent=Msa0884840-mRNA-1
chr6_1 exon 38978806 38978958 38978806 ID=Msa0884840-mRNA-1:exon:9023;Parent=Msa0884840-mRNA-1
chr6_1 exon 38979086 38979256 38979086 ID=Msa0884840-mRNA-1:exon:9022;Parent=Msa0884840-mRNA-1
chr6_1 exon 38980062 38980100 38980062 ID=Msa0884840-mRNA-1:exon:9021;Parent=Msa0884840-mRNA-1
chr6_1 exon 38980399 38980443 38980399 ID=Msa0884840-mRNA-1:exon:9020;Parent=Msa0884840-mRNA-1
chr6_1 exon 38982458 38982550 38982458 ID=Msa0884840-mRNA-1:exon:9019;Parent=Msa0884840-mRNA-1
chr6_1 exon 38982616 38982621 38982616 ID=Msa0884840-mRNA-1:exon:9018;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38982616 38982621 38982616 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38982458 38982550 38982458 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38980399 38980443 38980399 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38980062 38980100 38980062 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38979086 38979256 38979086 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38978806 38978958 38978806 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38977892 38977927 38977892 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38977041 38977084 38977041 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38976387 38976477 38976387 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38975779 38975887 38975779 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38974998 38975112 38974998 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38974861 38974910 38974861 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38974632 38974710 38974632 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38974316 38974366 38974316 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38974099 38974240 38974099 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38973891 38973935 38973891 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38973442 38973546 38973442 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38973310 38973351 38973310 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38973003 38973173 38973003 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38972399 38972518 38972399 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 CDS 38972162 38972266 38972162 ID=Msa0884840-mRNA-1:cds;Parent=Msa0884840-mRNA-1
chr6_1 three_prime_UTR 38971844 38972161 38971844 ID=Msa0884840-mRNA-1:three_prime_utr;Parent=Msa0884840-mRNA-1
Gene Sequence

>Msa0884840

GCAGAGGTACACCAATTTCTTTGTTTGGGTGATTTGACAAGAAAGAATGATAGAATCATTAAAAATAAGGCAAAATTTATGCATCACTTGTTGGATAAGGTTAGAGCTGCAGAGCTAAGGAAGATATTGGTGGAACTTGGTCCGGCATATATCAAAATTGCGCAGGCTATATCGTCTCGTTCTGATTTGATATCACCATCGTATCTAAATGAGCTCTCACAGCTGCAAGATCGAATAAGTCCATTTTCCACAGAAGTTGCTTTCAACATGATTGAACAAGAACTTGGTTTGTCCTTGTCTGAAATTTTCTCAGAGATTTCACCCGAGCCTGTTGCTGCTGCTTCTCTTGGGCAGGTTTATCAAGCCAGGCTTCGCAGAACAGGACAGGTTGTTGCTGTTAAAGTGCAAAGACCAGGTGTTCAAGCTGCAATTTCCCTTGACATTTTGATCTTGCGTTTTATGGCTGGGCTGGCTAAAAGAGCAGGAAAATTGAATACTGATCTTCAGGCAGTTGTCGATGAGTGGGCATCAAGCCTTTTTCGGGAGATGGACTACAATAATGAAGCAAGCAATGGTATCAAGTTCAGGAACTTATATGGTTCTATACAAGATGTGGTGGTTCCTTTGATGTACACAGAGTACACAACTCGCAAGGTCCTTGTCATGGAATGGATTGAGGTAGGAGTTTACTGCTCATTCAATCAACTTCTTGAGTGTGGGTTCTATCATGCAGACCCACACCCTGGAAATCTTCTTAGGACATCTGATGGCAAATTAGCTTATTTAGATTTTGGCATGACAGGTGAATTCAAACAAGAATTGCGTGATGGATTCATTGAAGCTTGTTTACATCTTGTAAATCGTGATTTTGGTGCATTGGCTACGGACTTTGTCACTCTTGGGCTTCTTCCACCAACTGCAGAGAAAGAAGCCGTTACAAAGGCTTTGACAGGTGTCTTCCAAAATGCTGTTTCCAAAGGAGTTCGTAATATCAGCTTTGGAGACCTTCTGGGAGACTTAGGAACAACCATGTATAAATTCAAGTTTAGGATACCTTCATACTTCTCACTTGTTATCCGAAGCCTTGCTGTACTGGAAGGAATTGCAATTGGCTTTAACCCAGACTACAAAGTCTTGGGTAGTACTTACCCATGGATTGCCAGAAAAGTGCTTACTGACAGCTCCCCTCAGCTTAGATCTTCTTTGGAGAATCTTCTTTATAAGGATGGTGTTTTCGATATAGACCGACTTGAGTCTTTGCTGACAGAGTCTCTCCGTGCCAAAACAGATAAGACCTTAGTAAAGATACCATCTGTAGGCGCAGATTCGAAAATGGTTATGAAGGAAATCCTTTCTTTTACACTAACAGAAAAGGGTGGATTTGTGAGGAAAATAATTGTTCAAGAATTTGCCAAGGGTTTAGATGCACTTGGGCTTGCTTCCTTGGAAACAGCTGCTGCAAGAGTTCCTTTCAGTAATTTCTTCTTTTCACCTTTAATGACCGAAGAAGATATAGTCAATTTAAGGACCTTCCAACGCCTTATGCTATTGCTATCAGGGGCCAGAAGAAAAGAAGACTTCAATATTGGAGAGACAAAGGCTAGTCCCGACCAGAATCAAATACTGTACTCGGAGGAGCTGTCGCTAGTTTTAAATCAATTTGACTCCATTCAAGACATTCTTCCTGTTCTTTCCGTCATTCCTGAGCTCCCACCGGAATCCCAGCAGCAATTATTTCAATTGCCAGCTAACTTGGTTCAACAGTTAATATCCCGCGCTGCTGCGAGAACTATCAAAAGGGTGTTTTTGTGA
Protein sequence

>Msa0884840

AEVHQFLCLGDLTRKNDRIIKNKAKFMHHLLDKVRAAELRKILVELGPAYIKIAQAISSRSDLISPSYLNELSQLQDRISPFSTEVAFNMIEQELGLSLSEIFSEISPEPVAAASLGQVYQARLRRTGQVVAVKVQRPGVQAAISLDILILRFMAGLAKRAGKLNTDLQAVVDEWASSLFREMDYNNEASNGIKFRNLYGSIQDVVVPLMYTEYTTRKVLVMEWIEVGVYCSFNQLLECGFYHADPHPGNLLRTSDGKLAYLDFGMTGEFKQELRDGFIEACLHLVNRDFGALATDFVTLGLLPPTAEKEAVTKALTGVFQNAVSKGVRNISFGDLLGDLGTTMYKFKFRIPSYFSLVIRSLAVLEGIAIGFNPDYKVLGSTYPWIARKVLTDSSPQLRSSLENLLYKDGVFDIDRLESLLTESLRAKTDKTLVKIPSVGADSKMVMKEILSFTLTEKGGFVRKIIVQEFAKGLDALGLASLETAAARVPFSNFFFSPLMTEEDIVNLRTFQRLMLLLSGARRKEDFNIGETKASPDQNQILYSEELSLVLNQFDSIQDILPVLSVIPELPPESQQQLFQLPANLVQQLISRAAARTIKRVFL*