Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0533960 | AES86950.1 | 62.963 | 486 | 92 | 10 | 1 | 418 | 18 | 483 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0533960 | G7JQ74 | 62.963 | 486 | 92 | 10 | 1 | 418 | 18 | 483 | 0.0 | 543 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0533960 | -0.806494 | 8.004594e-50 | -8.615850e-47 |
| Msa0008840 | Msa0533960 | -0.815863 | 7.432824e-52 | -8.615850e-47 |
| Msa0017320 | Msa0533960 | -0.800219 | 1.597103e-48 | -8.615850e-47 |
| Msa0033880 | Msa0533960 | -0.826637 | 2.431988e-54 | -8.615850e-47 |
| Msa0036370 | Msa0533960 | -0.815600 | 8.506265e-52 | -8.615850e-47 |
| Msa0047250 | Msa0533960 | -0.826325 | 2.886753e-54 | -8.615850e-47 |
| Msa0055150 | Msa0533960 | -0.802496 | 5.458464e-49 | -8.615850e-47 |
| Msa0070250 | Msa0533960 | -0.806158 | 9.421630e-50 | -8.615850e-47 |
| Msa0077540 | Msa0533960 | -0.806712 | 7.198944e-50 | -8.615850e-47 |
| Msa0077900 | Msa0533960 | -0.816021 | 6.853889e-52 | -8.615850e-47 |
| Msa0090030 | Msa0533960 | -0.809759 | 1.614334e-50 | -8.615850e-47 |
| Msa0092170 | Msa0533960 | -0.807061 | 6.076735e-50 | -8.615850e-47 |
| Msa0100800 | Msa0533960 | -0.835912 | 1.272966e-56 | -8.615850e-47 |
| Msa0101180 | Msa0533960 | -0.800707 | 1.270054e-48 | -8.615850e-47 |
| Msa0120540 | Msa0533960 | -0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0126840 | Msa0533960 | -0.821190 | 4.606380e-53 | -8.615850e-47 |
| Msa0126880 | Msa0533960 | -0.821443 | 4.026805e-53 | -8.615850e-47 |
| Msa0127040 | Msa0533960 | -0.820888 | 5.407160e-53 | -8.615850e-47 |
| Msa0127850 | Msa0533960 | -0.833551 | 4.996526e-56 | -8.615850e-47 |
| Msa0131450 | Msa0533960 | -0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0146080 | Msa0533960 | -0.804625 | 1.974179e-49 | -8.615850e-47 |
| Msa0166750 | Msa0533960 | -0.832394 | 9.693226e-56 | -8.615850e-47 |
| Msa0174000 | Msa0533960 | -0.841245 | 5.339791e-58 | -8.615850e-47 |
| Msa0175200 | Msa0533960 | -0.804847 | 1.774611e-49 | -8.615850e-47 |
| Msa0177270 | Msa0533960 | -0.806531 | 7.862390e-50 | -8.615850e-47 |
| Msa0198530 | Msa0533960 | -0.816530 | 5.272472e-52 | -8.615850e-47 |
| Msa0227310 | Msa0533960 | 0.820348 | 7.192276e-53 | -8.615850e-47 |
| Msa0229360 | Msa0533960 | -0.811792 | 5.864542e-51 | -8.615850e-47 |
| Msa0370160 | Msa0533960 | 0.820287 | 7.428984e-53 | -8.615850e-47 |
| Msa0384880 | Msa0533960 | -0.822757 | 1.997253e-53 | -8.615850e-47 |
| Msa0387880 | Msa0533960 | 0.830268 | 3.231500e-55 | -8.615850e-47 |
| Msa0436200 | Msa0533960 | -0.814361 | 1.602140e-51 | -8.615850e-47 |
| Msa0437690 | Msa0533960 | 0.801052 | 1.079807e-48 | -8.615850e-47 |
| Msa0439890 | Msa0533960 | -0.860869 | 1.528683e-63 | -8.615850e-47 |
| Msa0467260 | Msa0533960 | 0.824531 | 7.674025e-54 | -8.615850e-47 |
| Msa0474700 | Msa0533960 | -0.832146 | 1.116544e-55 | -8.615850e-47 |
| Msa0478580 | Msa0533960 | -0.823116 | 1.646552e-53 | -8.615850e-47 |
| Msa0251770 | Msa0533960 | -0.819001 | 1.460681e-52 | -8.615850e-47 |
| Msa0252240 | Msa0533960 | -0.801646 | 8.162518e-49 | -8.615850e-47 |
| Msa0265160 | Msa0533960 | -0.846766 | 1.767569e-59 | -8.615850e-47 |
| Msa0274100 | Msa0533960 | -0.800584 | 1.345846e-48 | -8.615850e-47 |
| Msa0291520 | Msa0533960 | -0.816521 | 5.298205e-52 | -8.615850e-47 |
| Msa0527910 | Msa0533960 | -0.801001 | 1.106370e-48 | -8.615850e-47 |
| Msa0530870 | Msa0533960 | 0.827080 | 1.905621e-54 | -8.615850e-47 |
| Msa0533960 | Msa0549790 | -0.808481 | 3.032800e-50 | -8.615850e-47 |
| Msa0533960 | Msa0550570 | -0.829322 | 5.493149e-55 | -8.615850e-47 |
| Msa0533960 | Msa0578090 | -0.802385 | 5.753387e-49 | -8.615850e-47 |
| Msa0533960 | Msa0618200 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0533960 | Msa0618930 | -0.810608 | 1.059114e-50 | -8.615850e-47 |
| Msa0533960 | Msa0620330 | -0.836680 | 8.119925e-57 | -8.615850e-47 |
| Msa0533960 | Msa0624550 | 0.963554 | 3.156589e-122 | -8.615850e-47 |
| Msa0533960 | Msa0646130 | -0.826697 | 2.352529e-54 | -8.615850e-47 |
| Msa0533960 | Msa0658480 | -0.828804 | 7.332241e-55 | -8.615850e-47 |
| Msa0533960 | Msa0668460 | 0.921070 | 5.730647e-88 | -8.615850e-47 |
| Msa0533960 | Msa0706390 | -0.801071 | 1.070247e-48 | -8.615850e-47 |
| Msa0533960 | Msa0720370 | -0.809760 | 1.613241e-50 | -8.615850e-47 |
| Msa0533960 | Msa0742510 | -0.806362 | 8.534528e-50 | -8.615850e-47 |
| Msa0533960 | Msa0743530 | -0.824740 | 6.851317e-54 | -8.615850e-47 |
| Msa0533960 | Msa0744090 | -0.810115 | 1.352911e-50 | -8.615850e-47 |
| Msa0533960 | Msa0744100 | -0.815040 | 1.133293e-51 | -8.615850e-47 |
| Msa0533960 | Msa0756930 | -0.805847 | 1.095368e-49 | -8.615850e-47 |
| Msa0533960 | Msa0766670 | -0.822745 | 2.009665e-53 | -8.615850e-47 |
| Msa0533960 | Msa0780880 | -0.817679 | 2.909789e-52 | -8.615850e-47 |
| Msa0533960 | Msa0781270 | -0.808032 | 3.779500e-50 | -8.615850e-47 |
| Msa0533960 | Msa0781710 | -0.818015 | 2.443814e-52 | -8.615850e-47 |
| Msa0533960 | Msa0814250 | -0.816603 | 5.078293e-52 | -8.615850e-47 |
| Msa0533960 | Msa0820250 | -0.800014 | 1.758235e-48 | -8.615850e-47 |
| Msa0533960 | Msa0822170 | -0.847902 | 8.620140e-60 | -8.615850e-47 |
| Msa0533960 | Msa0822180 | -0.821583 | 3.738270e-53 | -8.615850e-47 |
| Msa0533960 | Msa0823500 | -0.803143 | 4.012250e-49 | -8.615850e-47 |
| Msa0533960 | Msa0825270 | -0.822953 | 1.797500e-53 | -8.615850e-47 |
| Msa0533960 | Msa0825280 | -0.809772 | 1.604298e-50 | -8.615850e-47 |
| Msa0533960 | Msa0846400 | -0.807607 | 4.654775e-50 | -8.615850e-47 |
| Msa0533960 | Msa0851470 | -0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0533960 | Msa0862500 | -0.804792 | 1.822551e-49 | -8.615850e-47 |
| Msa0533960 | Msa0865570 | -0.823467 | 1.363672e-53 | -8.615850e-47 |
| Msa0533960 | Msa0869010 | -0.806953 | 6.404492e-50 | -8.615850e-47 |
| Msa0533960 | Msa0882730 | -0.800083 | 1.702348e-48 | -8.615850e-47 |
| Msa0533960 | Msa0921870 | -0.819119 | 1.373189e-52 | -8.615850e-47 |
| Msa0533960 | Msa0924150 | 0.812220 | 4.730580e-51 | -8.615850e-47 |
| Msa0533960 | Msa0943270 | -0.805977 | 1.028617e-49 | -8.615850e-47 |
| Msa0533960 | Msa0947800 | -0.815930 | 7.180888e-52 | -8.615850e-47 |
| Msa0533960 | Msa0959910 | -0.805983 | 1.025567e-49 | -8.615850e-47 |
| Msa0533960 | Msa0981430 | -0.830190 | 3.376550e-55 | -8.615850e-47 |
| Msa0533960 | Msa1010460 | -0.826782 | 2.245890e-54 | -8.615850e-47 |
| Msa0533960 | Msa1025940 | -0.818320 | 2.084873e-52 | -8.615850e-47 |
| Msa0533960 | Msa1030930 | -0.805660 | 1.199131e-49 | -8.615850e-47 |
| Msa0533960 | Msa1036740 | -0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0533960 | Msa1070050 | -0.819901 | 9.106068e-53 | -8.615850e-47 |
| Msa0533960 | Msa1070390 | -0.810592 | 1.067914e-50 | -8.615850e-47 |
| Msa0533960 | Msa1083880 | -0.811946 | 5.429010e-51 | -8.615850e-47 |
| Msa0533960 | Msa1088250 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa0533960 | Msa1089740 | 0.977488 | 6.992065e-144 | -8.615850e-47 |
| Msa0533960 | Msa1100530 | 0.828661 | 7.941583e-55 | -8.615850e-47 |
| Msa0533960 | Msa1114040 | -0.802684 | 4.991525e-49 | -8.615850e-47 |
| Msa0533960 | Msa1120810 | -0.804010 | 2.652588e-49 | -8.615850e-47 |
| Msa0533960 | Msa1135810 | 0.817690 | 2.893586e-52 | -8.615850e-47 |
| Msa0533960 | Msa1163870 | -0.807131 | 5.872784e-50 | -8.615850e-47 |
| Msa0533960 | Msa1172130 | 0.821515 | 3.875992e-53 | -8.615850e-47 |
| Msa0533960 | Msa1176980 | -0.804025 | 2.633463e-49 | -8.615850e-47 |
| Msa0533960 | Msa1178050 | -0.812344 | 4.445454e-51 | -8.615850e-47 |
| Msa0533960 | Msa1181170 | 0.852052 | 5.946099e-61 | -8.615850e-47 |
| Msa0533960 | Msa1197070 | -0.803850 | 2.863161e-49 | -8.615850e-47 |
| Msa0533960 | Msa1201830 | -0.811450 | 6.960678e-51 | -8.615850e-47 |
| Msa0533960 | Msa1206650 | -0.810822 | 9.521292e-51 | -8.615850e-47 |
| Msa0533960 | Msa1207730 | -0.812628 | 3.853409e-51 | -8.615850e-47 |
| Msa0533960 | Msa1211050 | 0.801996 | 6.918055e-49 | -8.615850e-47 |
| Msa0533960 | Msa1226610 | -0.820777 | 5.734339e-53 | -8.615850e-47 |
| Msa0533960 | Msa1253810 | -0.824297 | 8.714111e-54 | -8.615850e-47 |
| Msa0533960 | Msa1294840 | -0.811748 | 5.995300e-51 | -8.615850e-47 |
| Msa0533960 | Msa1296300 | -0.807679 | 4.494024e-50 | -8.615850e-47 |
| Msa0533960 | Msa1330890 | 0.805692 | 1.180594e-49 | -8.615850e-47 |
| Msa0533960 | Msa1340830 | -0.818768 | 1.649864e-52 | -8.615850e-47 |
| Msa0533960 | Msa1344850 | -0.801976 | 6.983079e-49 | -8.615850e-47 |
| Msa0533960 | Msa1355700 | -0.805404 | 1.357059e-49 | -8.615850e-47 |
| Msa0533960 | Msa1363700 | -0.807768 | 4.301887e-50 | -8.615850e-47 |
| Msa0533960 | Msa1365860 | -0.812337 | 4.460125e-51 | -8.615850e-47 |
| Msa0533960 | Msa1383350 | -0.805318 | 1.414338e-49 | -8.615850e-47 |
| Msa0533960 | Msa1389850 | -0.800027 | 1.747079e-48 | -8.615850e-47 |
| Msa0533960 | Msa1416260 | -0.825772 | 3.906885e-54 | -8.615850e-47 |
| Msa0533960 | Msa1426920 | -0.803525 | 3.344640e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0533960 | MtrunA17_Chr4g0007631 | 57.764 | 483 | 130 | 11 | 1 | 415 | 21 | 497 | 8.82e-169 | 492 |
| Msa0533960 | MtrunA17_Chr4g0008481 | 57.404 | 493 | 128 | 12 | 1 | 417 | 18 | 504 | 1.84e-165 | 483 |
| Msa0533960 | MtrunA17_Chr4g0007251 | 57.292 | 480 | 116 | 11 | 1 | 418 | 23 | 475 | 1.44e-153 | 451 |
| Msa0533960 | MtrunA17_Chr4g0007341 | 56.954 | 453 | 122 | 12 | 1 | 397 | 22 | 457 | 1.76e-153 | 450 |
| Msa0533960 | MtrunA17_Chr4g0007271 | 55.670 | 485 | 112 | 11 | 1 | 418 | 21 | 469 | 3.06e-147 | 435 |
| Msa0533960 | MtrunA17_Chr4g0007231 | 75.238 | 210 | 33 | 4 | 1 | 192 | 18 | 226 | 7.07e-101 | 306 |
| Msa0533960 | MtrunA17_Chr4g0007321 | 58.909 | 275 | 61 | 6 | 191 | 415 | 11 | 283 | 8.32e-89 | 278 |
| Msa0533960 | MtrunA17_Chr4g0008511 | 37.630 | 481 | 223 | 16 | 1 | 415 | 17 | 486 | 7.06e-77 | 253 |
| Msa0533960 | MtrunA17_Chr4g0007221 | 50.000 | 238 | 50 | 6 | 231 | 418 | 1 | 219 | 7.03e-55 | 187 |
| Msa0533960 | MtrunA17_Chr7g0239911 | 29.787 | 470 | 229 | 18 | 1 | 397 | 19 | 460 | 5.08e-40 | 152 |
| Msa0533960 | MtrunA17_Chr7g0241421 | 31.250 | 496 | 254 | 21 | 1 | 433 | 23 | 494 | 6.13e-39 | 151 |
| Msa0533960 | MtrunA17_Chr7g0241261 | 30.612 | 441 | 220 | 17 | 1 | 397 | 18 | 416 | 1.06e-36 | 142 |
| Msa0533960 | MtrunA17_Chr7g0241251 | 28.571 | 448 | 232 | 16 | 1 | 397 | 21 | 431 | 1.58e-35 | 139 |
| Msa0533960 | MtrunA17_Chr4g0007311 | 58.333 | 120 | 37 | 3 | 82 | 192 | 7 | 122 | 1.83e-35 | 130 |
| Msa0533960 | MtrunA17_Chr7g0241331 | 28.889 | 495 | 266 | 18 | 1 | 425 | 13 | 491 | 2.21e-34 | 137 |
| Msa0533960 | MtrunA17_Chr7g0237451 | 28.898 | 481 | 241 | 18 | 1 | 415 | 21 | 466 | 2.71e-34 | 136 |
| Msa0533960 | MtrunA17_Chr7g0239731 | 30.426 | 470 | 258 | 15 | 1 | 418 | 18 | 470 | 1.07e-33 | 134 |
| Msa0533960 | MtrunA17_Chr1g0166321 | 30.416 | 457 | 236 | 20 | 1 | 403 | 23 | 451 | 2.71e-32 | 130 |
| Msa0533960 | MtrunA17_Chr7g0241161 | 29.412 | 459 | 221 | 17 | 1 | 415 | 24 | 423 | 5.46e-32 | 129 |
| Msa0533960 | MtrunA17_Chr7g0238971 | 30.398 | 477 | 242 | 19 | 4 | 418 | 24 | 472 | 2.73e-31 | 127 |
| Msa0533960 | MtrunA17_Chr7g0241431 | 28.719 | 484 | 241 | 18 | 2 | 421 | 5 | 448 | 2.79e-30 | 124 |
| Msa0533960 | MtrunA17_Chr7g0218371 | 28.484 | 488 | 222 | 19 | 1 | 424 | 23 | 447 | 1.40e-29 | 122 |
| Msa0533960 | MtrunA17_Chr7g0239921 | 27.601 | 471 | 265 | 15 | 1 | 418 | 46 | 493 | 2.32e-29 | 122 |
| Msa0533960 | MtrunA17_Chr7g0238961 | 28.543 | 508 | 239 | 19 | 1 | 418 | 274 | 747 | 6.17e-29 | 122 |
| Msa0533960 | MtrunA17_Chr7g0238961 | 24.308 | 506 | 269 | 21 | 1 | 413 | 19 | 503 | 7.29e-13 | 72.0 |
| Msa0533960 | MtrunA17_Chr7g0239851 | 29.314 | 481 | 248 | 20 | 1 | 418 | 19 | 470 | 2.28e-28 | 119 |
| Msa0533960 | MtrunA17_Chr7g0239901 | 28.633 | 461 | 237 | 17 | 1 | 393 | 47 | 483 | 9.35e-28 | 117 |
| Msa0533960 | MtrunA17_Chr7g0239891 | 27.930 | 512 | 243 | 23 | 1 | 418 | 20 | 499 | 6.37e-27 | 115 |
| Msa0533960 | MtrunA17_Chr3g0078631 | 28.233 | 464 | 245 | 16 | 2 | 418 | 32 | 454 | 3.12e-25 | 109 |
| Msa0533960 | MtrunA17_Chr7g0241291 | 29.861 | 288 | 158 | 7 | 163 | 415 | 34 | 312 | 5.61e-24 | 103 |
| Msa0533960 | MtrunA17_Chr7g0239831 | 29.253 | 482 | 254 | 21 | 1 | 418 | 19 | 477 | 1.11e-23 | 104 |
| Msa0533960 | MtrunA17_Chr4g0008491 | 28.533 | 375 | 164 | 12 | 77 | 420 | 4 | 305 | 3.22e-22 | 97.8 |
| Msa0533960 | MtrunA17_Chr7g0241201 | 30.028 | 353 | 187 | 11 | 1 | 308 | 24 | 361 | 5.24e-22 | 98.6 |
| Msa0533960 | MtrunA17_Chr2g0291981 | 47.788 | 113 | 42 | 6 | 1 | 108 | 23 | 123 | 2.07e-20 | 88.2 |
| Msa0533960 | MtrunA17_Chr7g0239841 | 26.366 | 421 | 235 | 16 | 1 | 365 | 19 | 420 | 2.99e-18 | 87.8 |
| Msa0533960 | MtrunA17_Chr7g0239791 | 29.670 | 273 | 144 | 7 | 179 | 418 | 13 | 270 | 3.38e-18 | 85.5 |
| Msa0533960 | MtrunA17_Chr7g0241271 | 30.650 | 323 | 167 | 16 | 1 | 284 | 23 | 327 | 1.81e-17 | 84.0 |
| Msa0533960 | MtrunA17_Chr7g0241311 | 40.141 | 142 | 61 | 7 | 1 | 130 | 19 | 148 | 4.96e-17 | 81.3 |
| Msa0533960 | MtrunA17_Chr7g0241511 | 30.483 | 269 | 136 | 9 | 176 | 399 | 44 | 306 | 1.02e-14 | 76.3 |
| Msa0533960 | MtrunA17_Chr7g0241211 | 29.648 | 199 | 100 | 4 | 242 | 415 | 3 | 186 | 1.06e-13 | 70.1 |
| Msa0533960 | MtrunA17_Chr7g0241171 | 31.847 | 157 | 83 | 3 | 268 | 415 | 2 | 143 | 2.24e-13 | 68.2 |
| Msa0533960 | MtrunA17_Chr7g0241231 | 35.526 | 152 | 70 | 10 | 1 | 138 | 16 | 153 | 4.05e-13 | 67.4 |
| Msa0533960 | MtrunA17_Chr7g0263451 | 29.304 | 273 | 131 | 11 | 191 | 415 | 2 | 260 | 7.80e-13 | 69.3 |
| Msa0533960 | MtrunA17_Chr7g0241361 | 29.646 | 226 | 104 | 10 | 4 | 211 | 28 | 216 | 8.55e-13 | 68.9 |
| Msa0533960 | MtrunA17_Chr7g0232061 | 49.587 | 121 | 31 | 6 | 483 | 588 | 77 | 182 | 5.26e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0533960 | AT5G01120.1 | 28.402 | 507 | 274 | 21 | 1 | 438 | 18 | 504 | 1.80e-33 | 135 |
| Msa0533960 | AT5G01130.1 | 29.581 | 453 | 257 | 16 | 1 | 418 | 18 | 443 | 1.53e-30 | 125 |
| Msa0533960 | AT5G01150.1 | 28.810 | 479 | 262 | 19 | 1 | 418 | 18 | 478 | 4.30e-29 | 122 |
| Msa0533960 | AT3G09140.2 | 28.827 | 503 | 256 | 23 | 4 | 426 | 21 | 501 | 2.10e-28 | 119 |
| Msa0533960 | AT5G43240.1 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 1.13e-27 | 117 |
| Msa0533960 | AT5G43240.3 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 1.13e-27 | 117 |
| Msa0533960 | AT5G43240.4 | 28.571 | 518 | 256 | 23 | 1 | 434 | 18 | 505 | 1.13e-27 | 117 |
| Msa0533960 | AT5G01140.1 | 28.870 | 478 | 235 | 19 | 1 | 418 | 18 | 450 | 2.77e-26 | 113 |
| Msa0533960 | AT3G09140.1 | 27.307 | 531 | 256 | 24 | 4 | 426 | 21 | 529 | 6.35e-24 | 106 |
| Msa0533960 | AT5G37320.1 | 26.471 | 476 | 267 | 18 | 6 | 418 | 23 | 478 | 7.53e-21 | 96.7 |
| Msa0533960 | AT3G09110.1 | 30.938 | 320 | 166 | 17 | 1 | 284 | 18 | 318 | 1.96e-18 | 87.8 |
| Msa0533960 | AT3G09120.1 | 29.688 | 320 | 161 | 16 | 1 | 277 | 15 | 313 | 1.79e-16 | 81.3 |
Find 166 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTCCTTCCTTCAATTT+TGG | 0.106178 | 4_1:+9255212 | Msa0533960:CDS |
| TCTTCTCCTTCCTTCAATTT+TGG | 0.107419 | 4_1:+9255251 | Msa0533960:CDS |
| AAATCAACTGCCTCAAAATT+TGG | 0.108204 | 4_1:+9253310 | Msa0533960:CDS |
| CCAGAAACTTGAATCCATTT+TGG | 0.133453 | 4_1:-9253370 | None:intergenic |
| CCAAAATGGATTCAAGTTTC+TGG | 0.178569 | 4_1:+9253370 | Msa0533960:CDS |
| GCCTCTCACAAATACAATTT+TGG | 0.184722 | 4_1:+9254219 | Msa0533960:CDS |
| GAACACCCTACTTATTATTA+TGG | 0.206601 | 4_1:+9254591 | Msa0533960:CDS |
| CCATCCTTTGGATTTGGTTT+TGG | 0.223261 | 4_1:+9255758 | Msa0533960:CDS |
| CTTGCAGCTGTTGATGGAAT+TGG | 0.234153 | 4_1:+9253436 | Msa0533960:CDS |
| GCGGCTTCTATTCCGTCTTT+TGG | 0.262865 | 4_1:+9255596 | Msa0533960:CDS |
| AGGTGGGTTGTCTTTAGTTT+TGG | 0.263794 | 4_1:-9254251 | None:intergenic |
| GAGGCTTCTATGCTGTCTTT+TGG | 0.288076 | 4_1:+9255566 | Msa0533960:CDS |
| TTGGCTTCAAATGCGGCTTC+AGG | 0.290225 | 4_1:+9255410 | Msa0533960:CDS |
| TTGATCATTGTTGCTGTTGA+TGG | 0.292170 | 4_1:-9253018 | None:intergenic |
| GCAAAGTAAATCTCAGAAAA+AGG | 0.300596 | 4_1:+9254345 | Msa0533960:CDS |
| AACGGTGGCGGAACTGAAAA+TGG | 0.318402 | 4_1:-9255330 | None:intergenic |
| GCTTCGTGTAGGCCGTCTTT+TGG | 0.318681 | 4_1:+9255536 | Msa0533960:CDS |
| TCTATGCCATCCTTTGGATT+TGG | 0.328976 | 4_1:+9255752 | Msa0533960:CDS |
| ACCTATACTCAGACGATGTT+TGG | 0.330791 | 4_1:+9253108 | Msa0533960:CDS |
| GACTTACTTGCAGCTGTTGA+TGG | 0.339065 | 4_1:+9253430 | Msa0533960:CDS |
| TCGGCTTCGACACCGTGTTT+TGG | 0.343782 | 4_1:+9255500 | Msa0533960:CDS |
| GCCACCGTTGGCTCGCTGTT+TGG | 0.353028 | 4_1:+9255344 | Msa0533960:CDS |
| TAGCTTCCTTACATGCCATT+AGG | 0.353129 | 4_1:+9254411 | Msa0533960:intron |
| TTGCAGCTGTTGATGGAATT+GGG | 0.365599 | 4_1:+9253437 | Msa0533960:CDS |
| ATTGAAGGAAGGAGTTGTTC+TGG | 0.370835 | 4_1:-9255207 | None:intergenic |
| CATCGTCTGAGTATAGGTTT+TGG | 0.372178 | 4_1:-9253103 | None:intergenic |
| GCGGCTTCAGGGTCGTCATT+TGG | 0.375302 | 4_1:+9255422 | Msa0533960:CDS |
| GAGGCTTCTACACCGTCATT+TGG | 0.380541 | 4_1:+9255656 | Msa0533960:CDS |
| GCAGCTTCTACGCCGTTGTT+TGG | 0.381264 | 4_1:+9255686 | Msa0533960:CDS |
| TGCTGTTGATGGTGGCTAAA+AGG | 0.392005 | 4_1:-9253007 | None:intergenic |
| AATAGTGCGGATGCCCAAAA+TGG | 0.394854 | 4_1:+9253356 | Msa0533960:CDS |
| GTGTAGGCTTTGAACTTCCT+TGG | 0.395429 | 4_1:+9254932 | Msa0533960:intron |
| GCGGATTCTATGCCATCCTT+TGG | 0.396658 | 4_1:+9255746 | Msa0533960:CDS |
| GGATTGAGTAACACAGAAAC+CGG | 0.407217 | 4_1:-9254513 | None:intergenic |
| CCGTTTAGAGTACCGTCCTT+TGG | 0.417578 | 4_1:+9255467 | Msa0533960:CDS |
| TTCTGGAAGAGGAAGGAGAT+GGG | 0.430201 | 4_1:-9255190 | None:intergenic |
| ACAGCTTCTACACCGTCGTT+TGG | 0.433226 | 4_1:+9255626 | Msa0533960:CDS |
| CCTGTACCATAATAATAAGT+AGG | 0.434424 | 4_1:-9254597 | None:intergenic |
| CAGAAGTAAAATCGATGTTA+AGG | 0.436014 | 4_1:+9254318 | Msa0533960:CDS |
| ATTTGTGAGAGGCTCATTAG+AGG | 0.437734 | 4_1:-9254209 | None:intergenic |
| CCTGGTATAGCACCACAGTT+TGG | 0.441678 | 4_1:+9254534 | Msa0533960:CDS |
| GGAAGGAGTTGTTCTGGAAG+AGG | 0.442032 | 4_1:-9255201 | None:intergenic |
| TGGCTTCAAATGCGGCTTCA+GGG | 0.442560 | 4_1:+9255411 | Msa0533960:CDS |
| GAGAGGCTCATTAGAGGTTA+AGG | 0.444319 | 4_1:-9254203 | None:intergenic |
| GGAATGTTGAGTGGCTGGTT+TGG | 0.446551 | 4_1:-9254561 | None:intergenic |
| ATGGATCCTAATGGCATGTA+AGG | 0.452973 | 4_1:-9254417 | None:intergenic |
| GCCTCAAAATTTGGATTCTG+AGG | 0.458830 | 4_1:+9253319 | Msa0533960:CDS |
| TTCTTCTCCTTCCTTCCCAC+CGG | 0.460870 | 4_1:+9255289 | Msa0533960:CDS |
| ACACATCCAGCAAAAGAGTT+AGG | 0.466364 | 4_1:-9254456 | None:intergenic |
| GCAGAGGCCGGTGGGAAGGA+AGG | 0.468763 | 4_1:-9255296 | None:intergenic |
| GTTTCTGTGTTACTCAATCC+TGG | 0.470852 | 4_1:+9254516 | Msa0533960:CDS |
| ATTAACCTTGACTGATGGAC+TGG | 0.473962 | 4_1:+9254973 | Msa0533960:CDS |
| GGATCCATTGTAAAGCTTGT+GGG | 0.479392 | 4_1:+9254432 | Msa0533960:CDS |
| GTCGTCATTTGGAGCATCAC+CGG | 0.483099 | 4_1:+9255433 | Msa0533960:CDS |
| AAACAGCGAGCCAACGGTGG+CGG | 0.487139 | 4_1:-9255342 | None:intergenic |
| TGGTGCCAAGTGGAAGAGAT+AGG | 0.487529 | 4_1:-9252977 | None:intergenic |
| CCTTGGGTTCAGTGCAATCA+AGG | 0.487808 | 4_1:-9254649 | None:intergenic |
| TCAGTGCAATCAAGGACCTT+GGG | 0.489701 | 4_1:-9254641 | None:intergenic |
| GGAAGGAGATGGGAAGAAAG+AGG | 0.490171 | 4_1:-9255180 | None:intergenic |
| AGCTTTACAATGGATCCTAA+TGG | 0.492466 | 4_1:-9254426 | None:intergenic |
| ACCGTTGGCTCGCTGTTTGG+TGG | 0.493527 | 4_1:+9255347 | Msa0533960:CDS |
| CCTGAGGAATGTTGAGTGGC+TGG | 0.493538 | 4_1:-9254566 | None:intergenic |
| ACTGTTGATGCAGATTGCTT+AGG | 0.493675 | 4_1:-9254271 | None:intergenic |
| CAAAACATTCATCGCACTTG+TGG | 0.494288 | 4_1:+9253278 | Msa0533960:CDS |
| CCAAAGGACGGTACTCTAAA+CGG | 0.496179 | 4_1:-9255467 | None:intergenic |
| AGGTCAAAAGAAGGTGTTGT+GGG | 0.497682 | 4_1:+9254681 | Msa0533960:CDS |
| CCAAACTGTGGTGCTATACC+AGG | 0.500141 | 4_1:-9254534 | None:intergenic |
| TCCAAACATCGTCTGAGTAT+AGG | 0.500615 | 4_1:-9253109 | None:intergenic |
| GGAGTTGTTCTGGAAGAGGA+AGG | 0.501966 | 4_1:-9255197 | None:intergenic |
| AGCTTCCTATCTCTTCCACT+TGG | 0.503728 | 4_1:+9252972 | Msa0533960:CDS |
| TGAAGCAGAGGCCGGTGGGA+AGG | 0.504290 | 4_1:-9255300 | None:intergenic |
| AGGAGAAGAACTAGCGGGAG+AGG | 0.504742 | 4_1:-9255237 | None:intergenic |
| CACACACAACATTGGCAAGC+AGG | 0.511161 | 4_1:+9253490 | Msa0533960:CDS |
| GCCGTTGTTTGGAGATTCAC+CGG | 0.513365 | 4_1:+9255697 | Msa0533960:CDS |
| GAGAGTGTCAACAAAATCCT+TGG | 0.515103 | 4_1:-9252946 | None:intergenic |
| TTCAGTGCAATCAAGGACCT+TGG | 0.515168 | 4_1:-9254642 | None:intergenic |
| GCCAAAATTGTATTTGTGAG+AGG | 0.515201 | 4_1:-9254220 | None:intergenic |
| TTACTTCTGTTACTGGTGCA+AGG | 0.520158 | 4_1:-9254304 | None:intergenic |
| CAGGAACATCAAAGAGAAAG+AGG | 0.520391 | 4_1:+9254616 | Msa0533960:intron |
| AGGATCCATTGTAAAGCTTG+TGG | 0.523652 | 4_1:+9254431 | Msa0533960:CDS |
| AGCCGATGACGGTGCTCCAA+AGG | 0.526051 | 4_1:-9255483 | None:intergenic |
| TCAAAATTAACCTTGACTGA+TGG | 0.526140 | 4_1:+9254968 | Msa0533960:CDS |
| ATGGTGATGATTCTGAGGGT+TGG | 0.535301 | 4_1:-9253046 | None:intergenic |
| GTGGGATTTGTGAAGAGAGA+AGG | 0.537415 | 4_1:+9254699 | Msa0533960:CDS |
| ATCATTGTTGCTGTTGATGG+TGG | 0.539275 | 4_1:-9253015 | None:intergenic |
| GTTCTGGAAGAGGAAGGAGA+TGG | 0.541509 | 4_1:-9255191 | None:intergenic |
| AAGGAATGGTGATGATTCTG+AGG | 0.543097 | 4_1:-9253051 | None:intergenic |
| AGAGAAGGATTATATTGTGT+AGG | 0.548529 | 4_1:+9254714 | Msa0533960:CDS |
| GTTGATGCAGATTGCTTAGG+TGG | 0.556543 | 4_1:-9254268 | None:intergenic |
| CCTTGATTGCACTGAACCCA+AGG | 0.558804 | 4_1:+9254649 | Msa0533960:CDS |
| GTCCTTTGGAGCACCGTCAT+CGG | 0.559446 | 4_1:+9255481 | Msa0533960:CDS |
| GGCCTACACGAAGCCGATGA+TGG | 0.560032 | 4_1:-9255527 | None:intergenic |
| CTGTACCATAATAATAAGTA+GGG | 0.562506 | 4_1:-9254596 | None:intergenic |
| GCTGTCAGAGCTCCAAAAGA+CGG | 0.562631 | 4_1:-9255608 | None:intergenic |
| AAAGACAGCATAGAAGCCTC+TGG | 0.564575 | 4_1:-9255563 | None:intergenic |
| CAGTGTGGAGAACTTGAACC+CGG | 0.564774 | 4_1:+9254494 | Msa0533960:CDS |
| CCTCAAAATTTGGATTCTGA+GGG | 0.569344 | 4_1:+9253320 | Msa0533960:CDS |
| GGCGGACGATCCAAAATTGA+AGG | 0.571794 | 4_1:-9255261 | None:intergenic |
| AAGCTGAAGCAGAGGCCGGT+GGG | 0.574334 | 4_1:-9255304 | None:intergenic |
| GAAGAAGCTGAAGCAGAGGC+CGG | 0.576496 | 4_1:-9255308 | None:intergenic |
| TCAAACGAGGTTGAAGAAGC+CGG | 0.576667 | 4_1:-9255716 | None:intergenic |
| GGGAAGAAAGAGGAGGCAGA+AGG | 0.580646 | 4_1:-9255170 | None:intergenic |
| GAAGCTGAAGCAGAGGCCGG+TGG | 0.580815 | 4_1:-9255305 | None:intergenic |
| AGCAACATTGGCTTCAAATG+CGG | 0.582860 | 4_1:+9255403 | Msa0533960:CDS |
| GATAAGCATTGGTGAAGTTG+AGG | 0.584497 | 4_1:+9254830 | Msa0533960:CDS |
| CCAGCCACTCAACATTCCTC+AGG | 0.585126 | 4_1:+9254566 | Msa0533960:CDS |
| TTGATGCAGATTGCTTAGGT+GGG | 0.586176 | 4_1:-9254267 | None:intergenic |
| AACAACGGCGTAGAAGCTGC+TGG | 0.587982 | 4_1:-9255683 | None:intergenic |
| CCAAAACCAAATCCAAAGGA+TGG | 0.589035 | 4_1:-9255758 | None:intergenic |
| CTAAACGGCGTTGAAGAAGC+CGG | 0.589830 | 4_1:-9255452 | None:intergenic |
| AGGAGATGGGAAGAAAGAGG+AGG | 0.589833 | 4_1:-9255177 | None:intergenic |
| CACCATCATCGGCTTCGTGT+AGG | 0.592082 | 4_1:+9255525 | Msa0533960:CDS |
| GGGAGAGGATCCAAAATTGA+AGG | 0.594588 | 4_1:-9255222 | None:intergenic |
| ACCACCAAACAGCGAGCCAA+CGG | 0.594640 | 4_1:-9255348 | None:intergenic |
| AAGGATGGCATAGAATCCGC+TGG | 0.601423 | 4_1:-9255743 | None:intergenic |
| GTCTCCCAGTCCATCAGTCA+AGG | 0.604290 | 4_1:-9254978 | None:intergenic |
| CACGGTGTCGAAGCCGATGA+CGG | 0.607970 | 4_1:-9255494 | None:intergenic |
| AGGTCCCACAAGCTTTACAA+TGG | 0.609111 | 4_1:-9254436 | None:intergenic |
| GACGATCCAAAATTGAAGGA+AGG | 0.611889 | 4_1:-9255257 | None:intergenic |
| TCATCCAAAACCAAATCCAA+AGG | 0.611960 | 4_1:-9255762 | None:intergenic |
| GCCTCTGGTGGTCCAAAAGA+CGG | 0.616315 | 4_1:-9255548 | None:intergenic |
| TGCAGCTGTTGATGGAATTG+GGG | 0.616569 | 4_1:+9253438 | Msa0533960:CDS |
| AAGGAAGGAGAAGAACTAGC+GGG | 0.616659 | 4_1:-9255242 | None:intergenic |
| CTTGAATGTTGATGATGACA+CGG | 0.619606 | 4_1:+9253202 | Msa0533960:CDS |
| GAGGAAGTCACACACAACAT+TGG | 0.621785 | 4_1:+9253482 | Msa0533960:CDS |
| AAAGACGGAATAGAAGCCGC+TGG | 0.621809 | 4_1:-9255593 | None:intergenic |
| CAAAGAGAAAGAGGGACCCA+AGG | 0.624400 | 4_1:+9254625 | Msa0533960:CDS |
| AAGTAAGTCACAGACGAACA+TGG | 0.624914 | 4_1:-9253416 | None:intergenic |
| GAGGATCCAAAATTGAAGGA+AGG | 0.626080 | 4_1:-9255218 | None:intergenic |
| GCCTCTGATGTTCCAAACGA+CGG | 0.626720 | 4_1:-9255638 | None:intergenic |
| CTTCAAGATCATCAAGAGGG+AGG | 0.629909 | 4_1:-9254800 | None:intergenic |
| TTAACCTTGACTGATGGACT+GGG | 0.633283 | 4_1:+9254974 | Msa0533960:CDS |
| GAAGGAAGGAGAAGAACTAC+CGG | 0.635683 | 4_1:-9255282 | None:intergenic |
| TTCAGACTTGACTCAACTAG+AGG | 0.639443 | 4_1:+9253463 | Msa0533960:CDS |
| AACCTCGTTTGAAGCACCAG+CGG | 0.639449 | 4_1:+9255727 | Msa0533960:CDS |
| GCTGCTGGTGCTCCAAATGA+CGG | 0.639822 | 4_1:-9255668 | None:intergenic |
| TTCACTTCAAGATCATCAAG+AGG | 0.642125 | 4_1:-9254804 | None:intergenic |
| TTGATGTCAAGAATGCTCCA+AGG | 0.651294 | 4_1:-9254949 | None:intergenic |
| CAGGTCAAAAGAAGGTGTTG+TGG | 0.656062 | 4_1:+9254680 | Msa0533960:CDS |
| ACCAAACAGCGAGCCAACGG+TGG | 0.656980 | 4_1:-9255345 | None:intergenic |
| ATCCGCTGGTGCTTCAAACG+AGG | 0.659392 | 4_1:-9255729 | None:intergenic |
| GATGATGGTGCTCCAAAACA+CGG | 0.660139 | 4_1:-9255512 | None:intergenic |
| TAAGTAGGGTGTTCAACCTG+AGG | 0.660168 | 4_1:-9254582 | None:intergenic |
| AATGGAAGAAGCTGAAGCAG+AGG | 0.661140 | 4_1:-9255312 | None:intergenic |
| AGAAGGACAAGAAGTAGTTG+CGG | 0.661747 | 4_1:-9255153 | None:intergenic |
| GAAGGAAGGAGAAGAACTAG+CGG | 0.663240 | 4_1:-9255243 | None:intergenic |
| AGGACAAGAAGTAGTTGCGG+TGG | 0.664239 | 4_1:-9255150 | None:intergenic |
| GAAGTGAAGCTGATAAGCAT+TGG | 0.664925 | 4_1:+9254819 | Msa0533960:CDS |
| GCCGGTGAATCTCCAAACAA+CGG | 0.666513 | 4_1:-9255698 | None:intergenic |
| ACCGTCGTTTGGAACATCAG+AGG | 0.666816 | 4_1:+9255637 | Msa0533960:CDS |
| GGTGGCTAAAAGGCGGACAA+TGG | 0.668124 | 4_1:-9252997 | None:intergenic |
| AGGAACATCAAAGAGAAAGA+GGG | 0.669133 | 4_1:+9254617 | Msa0533960:intron |
| TCACTTCAAGATCATCAAGA+GGG | 0.670300 | 4_1:-9254803 | None:intergenic |
| TCAAGAGAATAGTAATAGTG+CGG | 0.674033 | 4_1:+9253343 | Msa0533960:CDS |
| ACACAACATTGGCAAGCAGG+AGG | 0.678135 | 4_1:+9253493 | Msa0533960:CDS |
| GATGACGGTGCTCCAAAGGA+CGG | 0.678623 | 4_1:-9255479 | None:intergenic |
| AGGCGGACAATGGTGCCAAG+TGG | 0.686421 | 4_1:-9252987 | None:intergenic |
| GACAGCATAGAAGCCTCTGG+TGG | 0.686956 | 4_1:-9255560 | None:intergenic |
| TGGTAATTTGTACAACAGTG+TGG | 0.689995 | 4_1:+9254479 | Msa0533960:CDS |
| GGAAGGAGAAGAACTACCGG+CGG | 0.696873 | 4_1:-9255279 | None:intergenic |
| TCAACCTGAGGAATGTTGAG+TGG | 0.701201 | 4_1:-9254570 | None:intergenic |
| GATTGAGTAACACAGAAACC+GGG | 0.708506 | 4_1:-9254512 | None:intergenic |
| AGGAATGGTGATGATTCTGA+GGG | 0.708623 | 4_1:-9253050 | None:intergenic |
| TTCATGCACAGTGATTCACA+TGG | 0.716552 | 4_1:-9253173 | None:intergenic |
| TGGTTTGGACAACCAAACTG+TGG | 0.745392 | 4_1:-9254546 | None:intergenic |
| TGTTGATGGTGGCTAAAAGG+CGG | 0.769976 | 4_1:-9253004 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATTAATTTTTATAAACT+TGG | - | chr4_1:9254878-9254897 | None:intergenic | 10.0% |
| !! | TTTATTGAGAATCTTTATTA+TGG | + | chr4_1:9253667-9253686 | Msa0533960:intron | 15.0% |
| !!! | TTTAAGATCTATTGAATTTT+GGG | - | chr4_1:9253849-9253868 | None:intergenic | 15.0% |
| !!! | ATTTAAGATCTATTGAATTT+TGG | - | chr4_1:9253850-9253869 | None:intergenic | 15.0% |
| !!! | ATATAATAAAAAAAGAGTAC+AGG | + | chr4_1:9253973-9253992 | Msa0533960:intron | 15.0% |
| !! | TCAAACAAACAAAAAAAAAA+AGG | - | chr4_1:9254127-9254146 | None:intergenic | 15.0% |
| !!! | TCACAAATATATGATTTTAG+AGG | - | chr4_1:9253745-9253764 | None:intergenic | 20.0% |
| !!! | TTAAGATCTATTGAATTTTG+GGG | - | chr4_1:9253848-9253867 | None:intergenic | 20.0% |
| !!! | TTTTTGATGTTTTCAAGGAA+TGG | - | chr4_1:9253068-9253087 | None:intergenic | 25.0% |
| ! | TGAATGTTCATGATTAAGAT+TGG | - | chr4_1:9253621-9253640 | None:intergenic | 25.0% |
| !!! | CAACTCATGATTTTAATTTG+TGG | + | chr4_1:9253639-9253658 | Msa0533960:intron | 25.0% |
| ! | CATTAATATTCACAATCTCA+GGG | + | chr4_1:9253925-9253944 | Msa0533960:intron | 25.0% |
| !!! | TTAGTATGTCTTCTTGTTTT+GGG | - | chr4_1:9254007-9254026 | None:intergenic | 25.0% |
| ! | TCAATATCTGTACATCAAAA+AGG | - | chr4_1:9254168-9254187 | None:intergenic | 25.0% |
| ! | CTGTACCATAATAATAAGTA+GGG | - | chr4_1:9254599-9254618 | None:intergenic | 25.0% |
| !!! | TTCTTTTGGTTTTGAAATTG+AGG | - | chr4_1:9255061-9255080 | None:intergenic | 25.0% |
| !!! | GTGTGAAGTTTTTTTTCTTT+TGG | - | chr4_1:9255075-9255094 | None:intergenic | 25.0% |
| !!! | AAGCAACAAAGTTGTTTTTG+TGG | + | chr4_1:9252917-9252936 | Msa0533960:CDS | 30.0% |
| ! | AGAGGTTTTTGATGTTTTCA+AGG | - | chr4_1:9253073-9253092 | None:intergenic | 30.0% |
| ! | CACACAAAAAACTTGTTTGA+TGG | - | chr4_1:9253230-9253249 | None:intergenic | 30.0% |
| AAATCAACTGCCTCAAAATT+TGG | + | chr4_1:9253310-9253329 | Msa0533960:CDS | 30.0% | |
| TCAAGAGAATAGTAATAGTG+CGG | + | chr4_1:9253343-9253362 | Msa0533960:CDS | 30.0% | |
| ! | CAGAAACTTGAATCCATTTT+GGG | - | chr4_1:9253372-9253391 | None:intergenic | 30.0% |
| AGGTAATTAAATGTGTTGTG+TGG | + | chr4_1:9253513-9253532 | Msa0533960:intron | 30.0% | |
| TATATTTGTGACTGCAATTG+AGG | + | chr4_1:9253754-9253773 | Msa0533960:intron | 30.0% | |
| !! | ATAGTGTATCAGTTAGTCTT+AGG | + | chr4_1:9253820-9253839 | Msa0533960:intron | 30.0% |
| CCTGAGATTGTGAATATTAA+TGG | - | chr4_1:9253927-9253946 | None:intergenic | 30.0% | |
| CCATTAATATTCACAATCTC+AGG | + | chr4_1:9253924-9253943 | Msa0533960:intron | 30.0% | |
| !! | CTTAGTATGTCTTCTTGTTT+TGG | - | chr4_1:9254008-9254027 | None:intergenic | 30.0% |
| !! | ATCGATTTTACTTCTGTTAC+TGG | - | chr4_1:9254314-9254333 | None:intergenic | 30.0% |
| CAGAAGTAAAATCGATGTTA+AGG | + | chr4_1:9254318-9254337 | Msa0533960:CDS | 30.0% | |
| GCAAAGTAAATCTCAGAAAA+AGG | + | chr4_1:9254345-9254364 | Msa0533960:CDS | 30.0% | |
| GAACACCCTACTTATTATTA+TGG | + | chr4_1:9254591-9254610 | Msa0533960:CDS | 30.0% | |
| CCTGTACCATAATAATAAGT+AGG | - | chr4_1:9254600-9254619 | None:intergenic | 30.0% | |
| CCTACTTATTATTATGGTAC+AGG | + | chr4_1:9254597-9254616 | Msa0533960:intron | 30.0% | |
| AGAGAAGGATTATATTGTGT+AGG | + | chr4_1:9254714-9254733 | Msa0533960:CDS | 30.0% | |
| ACAAGTAAAGGAAATCAAAG+AGG | - | chr4_1:9254911-9254930 | None:intergenic | 30.0% | |
| ! | TCTTTGATTTCCTTTACTTG+TGG | + | chr4_1:9254910-9254929 | Msa0533960:intron | 30.0% |
| TCAAAATTAACCTTGACTGA+TGG | + | chr4_1:9254968-9254987 | Msa0533960:CDS | 30.0% | |
| TTGAATGTTCGATTGCAAAA+GGG | - | chr4_1:9255031-9255050 | None:intergenic | 30.0% | |
| TTTGAATGTTCGATTGCAAA+AGG | - | chr4_1:9255032-9255051 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTGAAATTGAGGA+GGG | - | chr4_1:9255057-9255076 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTGAAATTGAGG+AGG | - | chr4_1:9255058-9255077 | None:intergenic | 30.0% |
| TGAGGATCCAAACTTAAATA+AGG | - | chr4_1:9255123-9255142 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTGGAAACAACCA+AGG | + | chr4_1:9252929-9252948 | Msa0533960:CDS | 35.0% |
| ! | TTGATCATTGTTGCTGTTGA+TGG | - | chr4_1:9253021-9253040 | None:intergenic | 35.0% |
| !! | CTTGAATGTTGATGATGACA+CGG | + | chr4_1:9253202-9253221 | Msa0533960:CDS | 35.0% |
| !!! | TTTTGAGGCAGTTGATTTGT+TGG | - | chr4_1:9253308-9253327 | None:intergenic | 35.0% |
| CCTCAAAATTTGGATTCTGA+GGG | + | chr4_1:9253320-9253339 | Msa0533960:CDS | 35.0% | |
| ! | CCAGAAACTTGAATCCATTT+TGG | - | chr4_1:9253373-9253392 | None:intergenic | 35.0% |
| ! | CCAAAATGGATTCAAGTTTC+TGG | + | chr4_1:9253370-9253389 | Msa0533960:CDS | 35.0% |
| !! | GATTTTAGAGGTTTCCACAA+CGG | - | chr4_1:9253733-9253752 | None:intergenic | 35.0% |
| AGAACTACTACATTTCCTGA+CGG | - | chr4_1:9253790-9253809 | None:intergenic | 35.0% | |
| TCAGGAAATGTAGTAGTTCT+AGG | + | chr4_1:9253790-9253809 | Msa0533960:intron | 35.0% | |
| TTGTGCCAAGTTTAAAGGTT+CGG | + | chr4_1:9253892-9253911 | Msa0533960:intron | 35.0% | |
| ! | GCCTCTCACAAATACAATTT+TGG | + | chr4_1:9254219-9254238 | Msa0533960:CDS | 35.0% |
| GCCAAAATTGTATTTGTGAG+AGG | - | chr4_1:9254223-9254242 | None:intergenic | 35.0% | |
| AGCTTTACAATGGATCCTAA+TGG | - | chr4_1:9254429-9254448 | None:intergenic | 35.0% | |
| ! | TGGTAATTTGTACAACAGTG+TGG | + | chr4_1:9254479-9254498 | Msa0533960:CDS | 35.0% |
| AGGAACATCAAAGAGAAAGA+GGG | + | chr4_1:9254617-9254636 | Msa0533960:intron | 35.0% | |
| AGATGCGAAAAAACAGAAAG+TGG | - | chr4_1:9254759-9254778 | None:intergenic | 35.0% | |
| TCACTTCAAGATCATCAAGA+GGG | - | chr4_1:9254806-9254825 | None:intergenic | 35.0% | |
| TTCACTTCAAGATCATCAAG+AGG | - | chr4_1:9254807-9254826 | None:intergenic | 35.0% | |
| ATTTCCTTTACTTGTGGTGT+AGG | + | chr4_1:9254916-9254935 | Msa0533960:intron | 35.0% | |
| TGAATGTTCGATTGCAAAAG+GGG | - | chr4_1:9255030-9255049 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTGAAATTGAGGAG+GGG | - | chr4_1:9255056-9255075 | None:intergenic | 35.0% |
| AAACTTAAATAAGGACGTGG+AGG | - | chr4_1:9255114-9255133 | None:intergenic | 35.0% | |
| ! | TCCACGTCCTTATTTAAGTT+TGG | + | chr4_1:9255113-9255132 | Msa0533960:intron | 35.0% |
| TCCAAACTTAAATAAGGACG+TGG | - | chr4_1:9255117-9255136 | None:intergenic | 35.0% | |
| ! | ACAACTCCTTCCTTCAATTT+TGG | + | chr4_1:9255212-9255231 | Msa0533960:CDS | 35.0% |
| ! | TCTTCTCCTTCCTTCAATTT+TGG | + | chr4_1:9255251-9255270 | Msa0533960:CDS | 35.0% |
| AAAAAAGTCGTAGGAGTAGT+AGG | - | chr4_1:9255380-9255399 | None:intergenic | 35.0% | |
| !!! | ACTACTCCTACGACTTTTTT+TGG | + | chr4_1:9255380-9255399 | Msa0533960:CDS | 35.0% |
| !!! | GACTTTTTTTGGAGCAACAT+TGG | + | chr4_1:9255391-9255410 | Msa0533960:CDS | 35.0% |
| !! | GAGAGTGTCAACAAAATCCT+TGG | - | chr4_1:9252949-9252968 | None:intergenic | 40.0% |
| ! | ATCATTGTTGCTGTTGATGG+TGG | - | chr4_1:9253018-9253037 | None:intergenic | 40.0% |
| ! | AGGAATGGTGATGATTCTGA+GGG | - | chr4_1:9253053-9253072 | None:intergenic | 40.0% |
| ! | AAGGAATGGTGATGATTCTG+AGG | - | chr4_1:9253054-9253073 | None:intergenic | 40.0% |
| !!! | AGTATAGGTTTTGGACGGTT+TGG | - | chr4_1:9253097-9253116 | None:intergenic | 40.0% |
| !!! | GTCTGAGTATAGGTTTTGGA+CGG | - | chr4_1:9253102-9253121 | None:intergenic | 40.0% |
| ! | CATCGTCTGAGTATAGGTTT+TGG | - | chr4_1:9253106-9253125 | None:intergenic | 40.0% |
| ACCTATACTCAGACGATGTT+TGG | + | chr4_1:9253108-9253127 | Msa0533960:CDS | 40.0% | |
| TCCAAACATCGTCTGAGTAT+AGG | - | chr4_1:9253112-9253131 | None:intergenic | 40.0% | |
| AGTGATTCACATGGATTCCT+GGG | - | chr4_1:9253167-9253186 | None:intergenic | 40.0% | |
| TTCATGCACAGTGATTCACA+TGG | - | chr4_1:9253176-9253195 | None:intergenic | 40.0% | |
| CAAAACATTCATCGCACTTG+TGG | + | chr4_1:9253278-9253297 | Msa0533960:CDS | 40.0% | |
| GCCTCAAAATTTGGATTCTG+AGG | + | chr4_1:9253319-9253338 | Msa0533960:CDS | 40.0% | |
| ! | CCCTCAGAATCCAAATTTTG+AGG | - | chr4_1:9253323-9253342 | None:intergenic | 40.0% |
| AAGTAAGTCACAGACGAACA+TGG | - | chr4_1:9253419-9253438 | None:intergenic | 40.0% | |
| ! | TTGCAGCTGTTGATGGAATT+GGG | + | chr4_1:9253437-9253456 | Msa0533960:CDS | 40.0% |
| TTCAGACTTGACTCAACTAG+AGG | + | chr4_1:9253463-9253482 | Msa0533960:CDS | 40.0% | |
| GAACTACTACATTTCCTGAC+GGG | - | chr4_1:9253789-9253808 | None:intergenic | 40.0% | |
| ! | GTAGCTTGTGCCAAGTTTAA+AGG | + | chr4_1:9253887-9253906 | Msa0533960:intron | 40.0% |
| CCTTTCCGAACCTTTAAACT+TGG | - | chr4_1:9253900-9253919 | None:intergenic | 40.0% | |
| CCAAGTTTAAAGGTTCGGAA+AGG | + | chr4_1:9253897-9253916 | Msa0533960:intron | 40.0% | |
| ATTTGTGAGAGGCTCATTAG+AGG | - | chr4_1:9254212-9254231 | None:intergenic | 40.0% | |
| !!! | AGGTGGGTTGTCTTTAGTTT+TGG | - | chr4_1:9254254-9254273 | None:intergenic | 40.0% |
| TTGATGCAGATTGCTTAGGT+GGG | - | chr4_1:9254270-9254289 | None:intergenic | 40.0% | |
| ACTGTTGATGCAGATTGCTT+AGG | - | chr4_1:9254274-9254293 | None:intergenic | 40.0% | |
| TTACTTCTGTTACTGGTGCA+AGG | - | chr4_1:9254307-9254326 | None:intergenic | 40.0% | |
| GTGATATATGCAGAAGCCAA+CGG | + | chr4_1:9254367-9254386 | Msa0533960:intron | 40.0% | |
| GAAGTCAACAAAATCACCGT+TGG | - | chr4_1:9254386-9254405 | None:intergenic | 40.0% | |
| TAGCTTCCTTACATGCCATT+AGG | + | chr4_1:9254411-9254430 | Msa0533960:intron | 40.0% | |
| ATGGATCCTAATGGCATGTA+AGG | - | chr4_1:9254420-9254439 | None:intergenic | 40.0% | |
| AGGATCCATTGTAAAGCTTG+TGG | + | chr4_1:9254431-9254450 | Msa0533960:CDS | 40.0% | |
| GGATCCATTGTAAAGCTTGT+GGG | + | chr4_1:9254432-9254451 | Msa0533960:CDS | 40.0% | |
| ACACATCCAGCAAAAGAGTT+AGG | - | chr4_1:9254459-9254478 | None:intergenic | 40.0% | |
| ! | AACTCTTTTGCTGGATGTGT+TGG | + | chr4_1:9254459-9254478 | Msa0533960:CDS | 40.0% |
| GATTGAGTAACACAGAAACC+GGG | - | chr4_1:9254515-9254534 | None:intergenic | 40.0% | |
| GGATTGAGTAACACAGAAAC+CGG | - | chr4_1:9254516-9254535 | None:intergenic | 40.0% | |
| ! | GTTTCTGTGTTACTCAATCC+TGG | + | chr4_1:9254516-9254535 | Msa0533960:CDS | 40.0% |
| CAGGAACATCAAAGAGAAAG+AGG | + | chr4_1:9254616-9254635 | Msa0533960:intron | 40.0% | |
| ! | ACACCTTCTTTTGACCTGTT+GGG | - | chr4_1:9254678-9254697 | None:intergenic | 40.0% |
| ! | AACACCTTCTTTTGACCTGT+TGG | - | chr4_1:9254679-9254698 | None:intergenic | 40.0% |
| !! | AGGTCAAAAGAAGGTGTTGT+GGG | + | chr4_1:9254681-9254700 | Msa0533960:CDS | 40.0% |
| GAAGTGAAGCTGATAAGCAT+TGG | + | chr4_1:9254819-9254838 | Msa0533960:CDS | 40.0% | |
| !! | GATAAGCATTGGTGAAGTTG+AGG | + | chr4_1:9254830-9254849 | Msa0533960:CDS | 40.0% |
| AAAGCCTACACCACAAGTAA+AGG | - | chr4_1:9254923-9254942 | None:intergenic | 40.0% | |
| TTGATGTCAAGAATGCTCCA+AGG | - | chr4_1:9254952-9254971 | None:intergenic | 40.0% | |
| ! | ATTAACCTTGACTGATGGAC+TGG | + | chr4_1:9254973-9254992 | Msa0533960:CDS | 40.0% |
| !! | TTAACCTTGACTGATGGACT+GGG | + | chr4_1:9254974-9254993 | Msa0533960:CDS | 40.0% |
| ! | GGATTTTAGGCACTTTCGAA+AGG | - | chr4_1:9255003-9255022 | None:intergenic | 40.0% |
| !! | CAAAAGGGGTTTGGGATTTT+AGG | - | chr4_1:9255016-9255035 | None:intergenic | 40.0% |
| TTCGATTGCAAAAGGGGTTT+GGG | - | chr4_1:9255024-9255043 | None:intergenic | 40.0% | |
| AGAAGGACAAGAAGTAGTTG+CGG | - | chr4_1:9255156-9255175 | None:intergenic | 40.0% | |
| ATTGAAGGAAGGAGTTGTTC+TGG | - | chr4_1:9255210-9255229 | None:intergenic | 40.0% | |
| GAGGATCCAAAATTGAAGGA+AGG | - | chr4_1:9255221-9255240 | None:intergenic | 40.0% | |
| GACGATCCAAAATTGAAGGA+AGG | - | chr4_1:9255260-9255279 | None:intergenic | 40.0% | |
| GTTGCTCCAAAAAAAGTCGT+AGG | - | chr4_1:9255389-9255408 | None:intergenic | 40.0% | |
| !! | AGCAACATTGGCTTCAAATG+CGG | + | chr4_1:9255403-9255422 | Msa0533960:CDS | 40.0% |
| TCTATGCCATCCTTTGGATT+TGG | + | chr4_1:9255752-9255771 | Msa0533960:CDS | 40.0% | |
| CCAAAACCAAATCCAAAGGA+TGG | - | chr4_1:9255761-9255780 | None:intergenic | 40.0% | |
| !! | CCATCCTTTGGATTTGGTTT+TGG | + | chr4_1:9255758-9255777 | Msa0533960:CDS | 40.0% |
| AGCTTCCTATCTCTTCCACT+TGG | + | chr4_1:9252972-9252991 | Msa0533960:CDS | 45.0% | |
| !! | TGTTGATGGTGGCTAAAAGG+CGG | - | chr4_1:9253007-9253026 | None:intergenic | 45.0% |
| !! | TGCTGTTGATGGTGGCTAAA+AGG | - | chr4_1:9253010-9253029 | None:intergenic | 45.0% |
| ! | ATGGTGATGATTCTGAGGGT+TGG | - | chr4_1:9253049-9253068 | None:intergenic | 45.0% |
| AACAAATGTTGCTGCATCCC+AGG | + | chr4_1:9253147-9253166 | Msa0533960:intron | 45.0% | |
| CAGTGATTCACATGGATTCC+TGG | - | chr4_1:9253168-9253187 | None:intergenic | 45.0% | |
| AATAGTGCGGATGCCCAAAA+TGG | + | chr4_1:9253356-9253375 | Msa0533960:CDS | 45.0% | |
| GACTTACTTGCAGCTGTTGA+TGG | + | chr4_1:9253430-9253449 | Msa0533960:CDS | 45.0% | |
| ! | CTTGCAGCTGTTGATGGAAT+TGG | + | chr4_1:9253436-9253455 | Msa0533960:CDS | 45.0% |
| ! | TGCAGCTGTTGATGGAATTG+GGG | + | chr4_1:9253438-9253457 | Msa0533960:CDS | 45.0% |
| GAGGAAGTCACACACAACAT+TGG | + | chr4_1:9253482-9253501 | Msa0533960:CDS | 45.0% | |
| GATAAATGCGCCCACAACTT+CGG | + | chr4_1:9253699-9253718 | Msa0533960:intron | 45.0% | |
| GGCATCATAACCGAAGTTGT+GGG | - | chr4_1:9253712-9253731 | None:intergenic | 45.0% | |
| GAGAGGCTCATTAGAGGTTA+AGG | - | chr4_1:9254206-9254225 | None:intergenic | 45.0% | |
| GTTGATGCAGATTGCTTAGG+TGG | - | chr4_1:9254271-9254290 | None:intergenic | 45.0% | |
| AGGTCCCACAAGCTTTACAA+TGG | - | chr4_1:9254439-9254458 | None:intergenic | 45.0% | |
| ! | TGGTTTGGACAACCAAACTG+TGG | - | chr4_1:9254549-9254568 | None:intergenic | 45.0% |
| TCAACCTGAGGAATGTTGAG+TGG | - | chr4_1:9254573-9254592 | None:intergenic | 45.0% | |
| ! | TAAGTAGGGTGTTCAACCTG+AGG | - | chr4_1:9254585-9254604 | None:intergenic | 45.0% |
| TCAGTGCAATCAAGGACCTT+GGG | - | chr4_1:9254644-9254663 | None:intergenic | 45.0% | |
| TTCAGTGCAATCAAGGACCT+TGG | - | chr4_1:9254645-9254664 | None:intergenic | 45.0% | |
| ! | ACCTTCTTTTGACCTGTTGG+GGG | - | chr4_1:9254676-9254695 | None:intergenic | 45.0% |
| ! | CACCTTCTTTTGACCTGTTG+GGG | - | chr4_1:9254677-9254696 | None:intergenic | 45.0% |
| !! | CAGGTCAAAAGAAGGTGTTG+TGG | + | chr4_1:9254680-9254699 | Msa0533960:CDS | 45.0% |
| GTGGGATTTGTGAAGAGAGA+AGG | + | chr4_1:9254699-9254718 | Msa0533960:CDS | 45.0% | |
| CTTCAAGATCATCAAGAGGG+AGG | - | chr4_1:9254803-9254822 | None:intergenic | 45.0% | |
| !! | GTGTAGGCTTTGAACTTCCT+TGG | + | chr4_1:9254932-9254951 | Msa0533960:intron | 45.0% |
| GTTCGATTGCAAAAGGGGTT+TGG | - | chr4_1:9255025-9255044 | None:intergenic | 45.0% | |
| CTTAAATAAGGACGTGGAGG+TGG | - | chr4_1:9255111-9255130 | None:intergenic | 45.0% | |
| ! | TTCTGGAAGAGGAAGGAGAT+GGG | - | chr4_1:9255193-9255212 | None:intergenic | 45.0% |
| GGGAGAGGATCCAAAATTGA+AGG | - | chr4_1:9255225-9255244 | None:intergenic | 45.0% | |
| AAGGAAGGAGAAGAACTAGC+GGG | - | chr4_1:9255245-9255264 | None:intergenic | 45.0% | |
| GAAGGAAGGAGAAGAACTAG+CGG | - | chr4_1:9255246-9255265 | None:intergenic | 45.0% | |
| ! | TTCAATTTTGGATCGTCCGC+CGG | + | chr4_1:9255263-9255282 | Msa0533960:CDS | 45.0% |
| GAAGGAAGGAGAAGAACTAC+CGG | - | chr4_1:9255285-9255304 | None:intergenic | 45.0% | |
| AATGGAAGAAGCTGAAGCAG+AGG | - | chr4_1:9255315-9255334 | None:intergenic | 45.0% | |
| CCAAAGGACGGTACTCTAAA+CGG | - | chr4_1:9255470-9255489 | None:intergenic | 45.0% | |
| ! | GATGATGGTGCTCCAAAACA+CGG | - | chr4_1:9255515-9255534 | None:intergenic | 45.0% |
| !!! | GTGTTTTGGAGCACCATCAT+CGG | + | chr4_1:9255514-9255533 | Msa0533960:CDS | 45.0% |
| AAAGACAGCATAGAAGCCTC+TGG | - | chr4_1:9255566-9255585 | None:intergenic | 45.0% | |
| ! | GAGGCTTCTATGCTGTCTTT+TGG | + | chr4_1:9255566-9255585 | Msa0533960:CDS | 45.0% |
| TCAAACGAGGTTGAAGAAGC+CGG | - | chr4_1:9255719-9255738 | None:intergenic | 45.0% | |
| ! | TGGTGCCAAGTGGAAGAGAT+AGG | - | chr4_1:9252980-9252999 | None:intergenic | 50.0% |
| !!! | GGTTTTGGACGGTTTGGTAG+AGG | - | chr4_1:9253091-9253110 | None:intergenic | 50.0% |
| CACACACAACATTGGCAAGC+AGG | + | chr4_1:9253490-9253509 | Msa0533960:CDS | 50.0% | |
| ACACAACATTGGCAAGCAGG+AGG | + | chr4_1:9253493-9253512 | Msa0533960:CDS | 50.0% | |
| CGGCATCATAACCGAAGTTG+TGG | - | chr4_1:9253713-9253732 | None:intergenic | 50.0% | |
| CTTCGGTTATGATGCCGTTG+TGG | + | chr4_1:9253716-9253735 | Msa0533960:intron | 50.0% | |
| ! | GTGGGACCTAACTCTTTTGC+TGG | + | chr4_1:9254450-9254469 | Msa0533960:CDS | 50.0% |
| CAGTGTGGAGAACTTGAACC+CGG | + | chr4_1:9254494-9254513 | Msa0533960:CDS | 50.0% | |
| !! | CCAAACTGTGGTGCTATACC+AGG | - | chr4_1:9254537-9254556 | None:intergenic | 50.0% |
| CCTGGTATAGCACCACAGTT+TGG | + | chr4_1:9254534-9254553 | Msa0533960:CDS | 50.0% | |
| ! | GGAATGTTGAGTGGCTGGTT+TGG | - | chr4_1:9254564-9254583 | None:intergenic | 50.0% |
| CAAAGAGAAAGAGGGACCCA+AGG | + | chr4_1:9254625-9254644 | Msa0533960:CDS | 50.0% | |
| CCTTGGGTTCAGTGCAATCA+AGG | - | chr4_1:9254652-9254671 | None:intergenic | 50.0% | |
| CCTTGATTGCACTGAACCCA+AGG | + | chr4_1:9254649-9254668 | Msa0533960:CDS | 50.0% | |
| TCCCCCAACAGGTCAAAAGA+AGG | + | chr4_1:9254672-9254691 | Msa0533960:CDS | 50.0% | |
| AGGACAAGAAGTAGTTGCGG+TGG | - | chr4_1:9255153-9255172 | None:intergenic | 50.0% | |
| AGGAGATGGGAAGAAAGAGG+AGG | - | chr4_1:9255180-9255199 | None:intergenic | 50.0% | |
| GGAAGGAGATGGGAAGAAAG+AGG | - | chr4_1:9255183-9255202 | None:intergenic | 50.0% | |
| !! | GTTCTGGAAGAGGAAGGAGA+TGG | - | chr4_1:9255194-9255213 | None:intergenic | 50.0% |
| !! | GGAGTTGTTCTGGAAGAGGA+AGG | - | chr4_1:9255200-9255219 | None:intergenic | 50.0% |
| !! | GGAAGGAGTTGTTCTGGAAG+AGG | - | chr4_1:9255204-9255223 | None:intergenic | 50.0% |
| GGCGGACGATCCAAAATTGA+AGG | - | chr4_1:9255264-9255283 | None:intergenic | 50.0% | |
| TTCTTCTCCTTCCTTCCCAC+CGG | + | chr4_1:9255289-9255308 | Msa0533960:CDS | 50.0% | |
| !! | AACGGTGGCGGAACTGAAAA+TGG | - | chr4_1:9255333-9255352 | None:intergenic | 50.0% |
| ! | ATTTTCAGTTCCGCCACCGT+TGG | + | chr4_1:9255332-9255351 | Msa0533960:CDS | 50.0% |
| TTGGCTTCAAATGCGGCTTC+AGG | + | chr4_1:9255410-9255429 | Msa0533960:CDS | 50.0% | |
| TGGCTTCAAATGCGGCTTCA+GGG | + | chr4_1:9255411-9255430 | Msa0533960:CDS | 50.0% | |
| ! | GTCGTCATTTGGAGCATCAC+CGG | + | chr4_1:9255433-9255452 | Msa0533960:CDS | 50.0% |
| ! | CTAAACGGCGTTGAAGAAGC+CGG | - | chr4_1:9255455-9255474 | None:intergenic | 50.0% |
| !! | CCGTTTAGAGTACCGTCCTT+TGG | + | chr4_1:9255467-9255486 | Msa0533960:CDS | 50.0% |
| AAAGACGGAATAGAAGCCGC+TGG | - | chr4_1:9255596-9255615 | None:intergenic | 50.0% | |
| ! | GCGGCTTCTATTCCGTCTTT+TGG | + | chr4_1:9255596-9255615 | Msa0533960:CDS | 50.0% |
| GCTGTCAGAGCTCCAAAAGA+CGG | - | chr4_1:9255611-9255630 | None:intergenic | 50.0% | |
| ACAGCTTCTACACCGTCGTT+TGG | + | chr4_1:9255626-9255645 | Msa0533960:CDS | 50.0% | |
| ! | ACCGTCGTTTGGAACATCAG+AGG | + | chr4_1:9255637-9255656 | Msa0533960:CDS | 50.0% |
| GCCTCTGATGTTCCAAACGA+CGG | - | chr4_1:9255641-9255660 | None:intergenic | 50.0% | |
| GAGGCTTCTACACCGTCATT+TGG | + | chr4_1:9255656-9255675 | Msa0533960:CDS | 50.0% | |
| GCCGTTGTTTGGAGATTCAC+CGG | + | chr4_1:9255697-9255716 | Msa0533960:CDS | 50.0% | |
| GCCGGTGAATCTCCAAACAA+CGG | - | chr4_1:9255701-9255720 | None:intergenic | 50.0% | |
| ! | AACCTCGTTTGAAGCACCAG+CGG | + | chr4_1:9255727-9255746 | Msa0533960:CDS | 50.0% |
| AAGGATGGCATAGAATCCGC+TGG | - | chr4_1:9255746-9255765 | None:intergenic | 50.0% | |
| GCGGATTCTATGCCATCCTT+TGG | + | chr4_1:9255746-9255765 | Msa0533960:CDS | 50.0% | |
| GGTGGCTAAAAGGCGGACAA+TGG | - | chr4_1:9253000-9253019 | None:intergenic | 55.0% | |
| TGAGGCATGTTTCACCCGTC+AGG | + | chr4_1:9253772-9253791 | Msa0533960:intron | 55.0% | |
| CCTGAGGAATGTTGAGTGGC+TGG | - | chr4_1:9254569-9254588 | None:intergenic | 55.0% | |
| CCAGCCACTCAACATTCCTC+AGG | + | chr4_1:9254566-9254585 | Msa0533960:CDS | 55.0% | |
| TTGACCTGTTGGGGGACCTT+GGG | - | chr4_1:9254668-9254687 | None:intergenic | 55.0% | |
| TTTGACCTGTTGGGGGACCT+TGG | - | chr4_1:9254669-9254688 | None:intergenic | 55.0% | |
| GTCTCCCAGTCCATCAGTCA+AGG | - | chr4_1:9254981-9255000 | None:intergenic | 55.0% | |
| TGGAGGTGGATGATGAGGGA+GGG | - | chr4_1:9255097-9255116 | None:intergenic | 55.0% | |
| GACGTGGAGGTGGATGATGA+GGG | - | chr4_1:9255101-9255120 | None:intergenic | 55.0% | |
| AGTTGCGGTGGTTGTCTGTG+AGG | - | chr4_1:9255141-9255160 | None:intergenic | 55.0% | |
| GGGAAGAAAGAGGAGGCAGA+AGG | - | chr4_1:9255173-9255192 | None:intergenic | 55.0% | |
| AGGAGAAGAACTAGCGGGAG+AGG | - | chr4_1:9255240-9255259 | None:intergenic | 55.0% | |
| GGAAGGAGAAGAACTACCGG+CGG | - | chr4_1:9255282-9255301 | None:intergenic | 55.0% | |
| GAAGAAGCTGAAGCAGAGGC+CGG | - | chr4_1:9255311-9255330 | None:intergenic | 55.0% | |
| ACCACCAAACAGCGAGCCAA+CGG | - | chr4_1:9255351-9255370 | None:intergenic | 55.0% | |
| ! | GATGACGGTGCTCCAAAGGA+CGG | - | chr4_1:9255482-9255501 | None:intergenic | 55.0% |
| !! | GTCCTTTGGAGCACCGTCAT+CGG | + | chr4_1:9255481-9255500 | Msa0533960:CDS | 55.0% |
| ! | TCGGCTTCGACACCGTGTTT+TGG | + | chr4_1:9255500-9255519 | Msa0533960:CDS | 55.0% |
| !! | CACCATCATCGGCTTCGTGT+AGG | + | chr4_1:9255525-9255544 | Msa0533960:CDS | 55.0% |
| ! | GCTTCGTGTAGGCCGTCTTT+TGG | + | chr4_1:9255536-9255555 | Msa0533960:CDS | 55.0% |
| GCCTCTGGTGGTCCAAAAGA+CGG | - | chr4_1:9255551-9255570 | None:intergenic | 55.0% | |
| GACAGCATAGAAGCCTCTGG+TGG | - | chr4_1:9255563-9255582 | None:intergenic | 55.0% | |
| !!! | GCTGTCTTTTGGAGCACCAG+CGG | + | chr4_1:9255577-9255596 | Msa0533960:CDS | 55.0% |
| GCTGCTGGTGCTCCAAATGA+CGG | - | chr4_1:9255671-9255690 | None:intergenic | 55.0% | |
| AACAACGGCGTAGAAGCTGC+TGG | - | chr4_1:9255686-9255705 | None:intergenic | 55.0% | |
| GCAGCTTCTACGCCGTTGTT+TGG | + | chr4_1:9255686-9255705 | Msa0533960:CDS | 55.0% | |
| ATCCGCTGGTGCTTCAAACG+AGG | - | chr4_1:9255732-9255751 | None:intergenic | 55.0% | |
| ! | AGGCGGACAATGGTGCCAAG+TGG | - | chr4_1:9252990-9253009 | None:intergenic | 60.0% |
| TGAACCCAAGGTCCCCCAAC+AGG | + | chr4_1:9254661-9254680 | Msa0533960:CDS | 60.0% | |
| GTGGAGGTGGATGATGAGGG+AGG | - | chr4_1:9255098-9255117 | None:intergenic | 60.0% | |
| GGACGTGGAGGTGGATGATG+AGG | - | chr4_1:9255102-9255121 | None:intergenic | 60.0% | |
| AAGCTGAAGCAGAGGCCGGT+GGG | - | chr4_1:9255307-9255326 | None:intergenic | 60.0% | |
| AAACAGCGAGCCAACGGTGG+CGG | - | chr4_1:9255345-9255364 | None:intergenic | 60.0% | |
| ACCAAACAGCGAGCCAACGG+TGG | - | chr4_1:9255348-9255367 | None:intergenic | 60.0% | |
| !! | ACCGTTGGCTCGCTGTTTGG+TGG | + | chr4_1:9255347-9255366 | Msa0533960:CDS | 60.0% |
| GCGGCTTCAGGGTCGTCATT+TGG | + | chr4_1:9255422-9255441 | Msa0533960:CDS | 60.0% | |
| ! | AGCCGATGACGGTGCTCCAA+AGG | - | chr4_1:9255486-9255505 | None:intergenic | 60.0% |
| ! | CACGGTGTCGAAGCCGATGA+CGG | - | chr4_1:9255497-9255516 | None:intergenic | 60.0% |
| GGCCTACACGAAGCCGATGA+TGG | - | chr4_1:9255530-9255549 | None:intergenic | 60.0% | |
| ! | GCCGTCTTTTGGACCACCAG+AGG | + | chr4_1:9255547-9255566 | Msa0533960:CDS | 60.0% |
| TGAAGCAGAGGCCGGTGGGA+AGG | - | chr4_1:9255303-9255322 | None:intergenic | 65.0% | |
| GAAGCTGAAGCAGAGGCCGG+TGG | - | chr4_1:9255308-9255327 | None:intergenic | 65.0% | |
| !! | GCCACCGTTGGCTCGCTGTT+TGG | + | chr4_1:9255344-9255363 | Msa0533960:CDS | 65.0% |
| GCAGAGGCCGGTGGGAAGGA+AGG | - | chr4_1:9255299-9255318 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 9252912 | 9255781 | 9252912 | ID=Msa0533960;Name=Msa0533960 |
| chr4_1 | mRNA | 9252912 | 9255781 | 9252912 | ID=Msa0533960-mRNA-1;Parent=Msa0533960;Name=Msa0533960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.28|0|1|0.14|0|8|0|632 |
| chr4_1 | exon | 9252912 | 9253153 | 9252912 | ID=Msa0533960-mRNA-1:exon:3003;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9253169 | 9253391 | 9253169 | ID=Msa0533960-mRNA-1:exon:3004;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9253410 | 9253514 | 9253410 | ID=Msa0533960-mRNA-1:exon:3005;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9254181 | 9254366 | 9254181 | ID=Msa0533960-mRNA-1:exon:3006;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9254414 | 9254612 | 9254414 | ID=Msa0533960-mRNA-1:exon:3007;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9254619 | 9254851 | 9254619 | ID=Msa0533960-mRNA-1:exon:3008;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9254938 | 9255009 | 9254938 | ID=Msa0533960-mRNA-1:exon:3009;Parent=Msa0533960-mRNA-1 |
| chr4_1 | exon | 9255146 | 9255781 | 9255146 | ID=Msa0533960-mRNA-1:exon:3010;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9252912 | 9253153 | 9252912 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9253169 | 9253391 | 9253169 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9253410 | 9253514 | 9253410 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9254181 | 9254366 | 9254181 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9254414 | 9254612 | 9254414 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9254619 | 9254851 | 9254619 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9254938 | 9255009 | 9254938 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| chr4_1 | CDS | 9255146 | 9255781 | 9255146 | ID=Msa0533960-mRNA-1:cds;Parent=Msa0533960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
