Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103070 | sp|Q02921|NO93_SOYBN | 65.000 | 80 | 28 | 0 | 26 | 105 | 17 | 96 | 3.04e-23 | 89.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103070 | G7I281 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 5.43e-82 | 245 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0103070 | 0.813828 | 2.101031e-51 | -8.615850e-47 |
| Msa0008840 | Msa0103070 | 0.981298 | 2.989886e-152 | -8.615850e-47 |
| Msa0014830 | Msa0103070 | 0.812070 | 5.099737e-51 | -8.615850e-47 |
| Msa0017320 | Msa0103070 | 0.802455 | 5.565858e-49 | -8.615850e-47 |
| Msa0020390 | Msa0103070 | 0.847961 | 8.302728e-60 | -8.615850e-47 |
| Msa0030300 | Msa0103070 | 0.810983 | 8.784943e-51 | -8.615850e-47 |
| Msa0033880 | Msa0103070 | 0.834620 | 2.697166e-56 | -8.615850e-47 |
| Msa0036370 | Msa0103070 | 0.800142 | 1.655620e-48 | -8.615850e-47 |
| Msa0038870 | Msa0103070 | 0.818831 | 1.596201e-52 | -8.615850e-47 |
| Msa0047250 | Msa0103070 | 0.816026 | 6.837470e-52 | -8.615850e-47 |
| Msa0055100 | Msa0103070 | 0.820681 | 6.031161e-53 | -8.615850e-47 |
| Msa0055150 | Msa0103070 | 0.838500 | 2.771536e-57 | -8.615850e-47 |
| Msa0057750 | Msa0103070 | 0.998167 | 8.459468e-258 | -8.615850e-47 |
| Msa0061970 | Msa0103070 | 0.814915 | 1.208059e-51 | -8.615850e-47 |
| Msa0065010 | Msa0103070 | 0.822981 | 1.770916e-53 | -8.615850e-47 |
| Msa0068020 | Msa0103070 | 0.803723 | 3.042808e-49 | -8.615850e-47 |
| Msa0074750 | Msa0103070 | 0.825671 | 4.128740e-54 | -8.615850e-47 |
| Msa0077540 | Msa0103070 | 0.800817 | 1.206169e-48 | -8.615850e-47 |
| Msa0077900 | Msa0103070 | 0.813796 | 2.135136e-51 | -8.615850e-47 |
| Msa0081650 | Msa0103070 | 0.800897 | 1.161656e-48 | -8.615850e-47 |
| Msa0084430 | Msa0103070 | 0.802550 | 5.319292e-49 | -8.615850e-47 |
| Msa0090550 | Msa0103070 | 0.811007 | 8.680713e-51 | -8.615850e-47 |
| Msa0091610 | Msa0103070 | 0.800565 | 1.357674e-48 | -8.615850e-47 |
| Msa0092170 | Msa0103070 | 0.813507 | 2.471576e-51 | -8.615850e-47 |
| Msa0093010 | Msa0103070 | 0.814249 | 1.696488e-51 | -8.615850e-47 |
| Msa0095360 | Msa0103070 | 0.805400 | 1.359806e-49 | -8.615850e-47 |
| Msa0095770 | Msa0103070 | 0.801312 | 9.554702e-49 | -8.615850e-47 |
| Msa0100800 | Msa0103070 | 0.823186 | 1.586267e-53 | -8.615850e-47 |
| Msa0101180 | Msa0103070 | 0.844765 | 6.171767e-59 | -8.615850e-47 |
| Msa0103070 | Msa0103790 | 0.842988 | 1.846830e-58 | -8.615850e-47 |
| Msa0103070 | Msa0111080 | 0.809236 | 2.091088e-50 | -8.615850e-47 |
| Msa0103070 | Msa0112300 | -0.800796 | 1.218370e-48 | -8.615850e-47 |
| Msa0103070 | Msa0115370 | 0.837049 | 6.535897e-57 | -8.615850e-47 |
| Msa0103070 | Msa0118540 | 0.812667 | 3.777165e-51 | -8.615850e-47 |
| Msa0103070 | Msa0121820 | 0.825457 | 4.638772e-54 | -8.615850e-47 |
| Msa0103070 | Msa0126880 | 0.843264 | 1.559315e-58 | -8.615850e-47 |
| Msa0103070 | Msa0127850 | 0.825846 | 3.750882e-54 | -8.615850e-47 |
| Msa0103070 | Msa0131450 | 0.822152 | 2.759508e-53 | -8.615850e-47 |
| Msa0103070 | Msa0142500 | 0.840965 | 6.327526e-58 | -8.615850e-47 |
| Msa0103070 | Msa0145150 | 0.811381 | 7.201647e-51 | -8.615850e-47 |
| Msa0103070 | Msa0146080 | 0.835234 | 1.889722e-56 | -8.615850e-47 |
| Msa0103070 | Msa0150260 | 0.849808 | 2.549073e-60 | -8.615850e-47 |
| Msa0103070 | Msa0154920 | 0.820198 | 7.786838e-53 | -8.615850e-47 |
| Msa0103070 | Msa0166750 | 0.844512 | 7.220771e-59 | -8.615850e-47 |
| Msa0103070 | Msa0167980 | 0.809935 | 1.479581e-50 | -8.615850e-47 |
| Msa0103070 | Msa0171980 | 0.820329 | 7.266786e-53 | -8.615850e-47 |
| Msa0103070 | Msa0174000 | 0.835664 | 1.471198e-56 | -8.615850e-47 |
| Msa0103070 | Msa0175200 | 0.808019 | 3.803353e-50 | -8.615850e-47 |
| Msa0103070 | Msa0175290 | -0.806624 | 7.513312e-50 | -8.615850e-47 |
| Msa0103070 | Msa0176330 | 0.833803 | 4.323478e-56 | -8.615850e-47 |
| Msa0103070 | Msa0183460 | 0.807847 | 4.137502e-50 | -8.615850e-47 |
| Msa0103070 | Msa0183870 | 0.859787 | 3.246941e-63 | -8.615850e-47 |
| Msa0103070 | Msa0187490 | 0.822980 | 1.771320e-53 | -8.615850e-47 |
| Msa0103070 | Msa0190120 | 0.809191 | 2.137348e-50 | -8.615850e-47 |
| Msa0103070 | Msa0191080 | 0.809545 | 1.794763e-50 | -8.615850e-47 |
| Msa0103070 | Msa0193600 | 0.832622 | 8.512373e-56 | -8.615850e-47 |
| Msa0103070 | Msa0202930 | 0.834162 | 3.515446e-56 | -8.615850e-47 |
| Msa0103070 | Msa0209080 | 0.814623 | 1.402275e-51 | -8.615850e-47 |
| Msa0103070 | Msa0229360 | 0.806104 | 9.671025e-50 | -8.615850e-47 |
| Msa0103070 | Msa0233370 | 0.807975 | 3.887599e-50 | -8.615850e-47 |
| Msa0103070 | Msa0241740 | 0.823359 | 1.445331e-53 | -8.615850e-47 |
| Msa0103070 | Msa0257490 | 0.822477 | 2.320319e-53 | -8.615850e-47 |
| Msa0103070 | Msa0265160 | 0.806244 | 9.040035e-50 | -8.615850e-47 |
| Msa0103070 | Msa0265600 | 0.803429 | 3.500565e-49 | -8.615850e-47 |
| Msa0103070 | Msa0269470 | 0.828773 | 7.459999e-55 | -8.615850e-47 |
| Msa0103070 | Msa0273650 | 0.828280 | 9.813508e-55 | -8.615850e-47 |
| Msa0103070 | Msa0280430 | 0.801727 | 7.855171e-49 | -8.615850e-47 |
| Msa0103070 | Msa0284450 | 0.808067 | 3.715172e-50 | -8.615850e-47 |
| Msa0103070 | Msa0291520 | 0.813135 | 2.982989e-51 | -8.615850e-47 |
| Msa0103070 | Msa0296790 | 0.823262 | 1.522723e-53 | -8.615850e-47 |
| Msa0103070 | Msa0296920 | 0.828149 | 1.055346e-54 | -8.615850e-47 |
| Msa0103070 | Msa0304660 | 0.819849 | 9.355176e-53 | -8.615850e-47 |
| Msa0103070 | Msa0331700 | 0.817302 | 3.538130e-52 | -8.615850e-47 |
| Msa0103070 | Msa0347750 | 0.801563 | 8.486716e-49 | -8.615850e-47 |
| Msa0103070 | Msa0365860 | 0.815369 | 9.574765e-52 | -8.615850e-47 |
| Msa0103070 | Msa0370160 | -0.810519 | 1.107295e-50 | -8.615850e-47 |
| Msa0103070 | Msa0379570 | 0.833832 | 4.251968e-56 | -8.615850e-47 |
| Msa0103070 | Msa0382370 | 0.807139 | 5.848666e-50 | -8.615850e-47 |
| Msa0103070 | Msa0384670 | 0.821726 | 3.463893e-53 | -8.615850e-47 |
| Msa0103070 | Msa0384880 | 0.838688 | 2.477983e-57 | -8.615850e-47 |
| Msa0103070 | Msa0385490 | 0.821285 | 4.380465e-53 | -8.615850e-47 |
| Msa0103070 | Msa0387880 | -0.810040 | 1.404850e-50 | -8.615850e-47 |
| Msa0103070 | Msa0389510 | 0.821246 | 4.470735e-53 | -8.615850e-47 |
| Msa0103070 | Msa0403770 | 0.812943 | 3.286763e-51 | -8.615850e-47 |
| Msa0103070 | Msa0408390 | 0.814545 | 1.459205e-51 | -8.615850e-47 |
| Msa0103070 | Msa0434570 | 0.806788 | 6.938263e-50 | -8.615850e-47 |
| Msa0103070 | Msa0434770 | 0.814897 | 1.218985e-51 | -8.615850e-47 |
| Msa0103070 | Msa0436190 | 0.804832 | 1.787343e-49 | -8.615850e-47 |
| Msa0103070 | Msa0436200 | 0.812031 | 5.200662e-51 | -8.615850e-47 |
| Msa0103070 | Msa0439890 | 0.832763 | 7.850275e-56 | -8.615850e-47 |
| Msa0103070 | Msa0443430 | 0.823739 | 1.177962e-53 | -8.615850e-47 |
| Msa0103070 | Msa0478580 | 0.811396 | 7.148774e-51 | -8.615850e-47 |
| Msa0103070 | Msa0479330 | 0.802763 | 4.807740e-49 | -8.615850e-47 |
| Msa0103070 | Msa0482940 | 0.802399 | 5.714813e-49 | -8.615850e-47 |
| Msa0103070 | Msa0484740 | 0.810941 | 8.974556e-51 | -8.615850e-47 |
| Msa0103070 | Msa0485850 | 0.807185 | 5.719022e-50 | -8.615850e-47 |
| Msa0103070 | Msa0489660 | 0.802136 | 6.473445e-49 | -8.615850e-47 |
| Msa0103070 | Msa0511770 | 0.800606 | 1.331991e-48 | -8.615850e-47 |
| Msa0103070 | Msa0524590 | 0.802021 | 6.835253e-49 | -8.615850e-47 |
| Msa0103070 | Msa0527910 | 0.811237 | 7.739772e-51 | -8.615850e-47 |
| Msa0103070 | Msa0534410 | 0.820495 | 6.656391e-53 | -8.615850e-47 |
| Msa0103070 | Msa0534900 | 0.800282 | 1.550621e-48 | -8.615850e-47 |
| Msa0103070 | Msa0546570 | 0.802723 | 4.899254e-49 | -8.615850e-47 |
| Msa0103070 | Msa0547990 | 0.829222 | 5.807215e-55 | -8.615850e-47 |
| Msa0103070 | Msa0556790 | 0.813926 | 1.998479e-51 | -8.615850e-47 |
| Msa0103070 | Msa0580230 | 0.816408 | 5.616272e-52 | -8.615850e-47 |
| Msa0103070 | Msa0583500 | 0.802782 | 4.764757e-49 | -8.615850e-47 |
| Msa0103070 | Msa0590650 | 0.811358 | 7.286290e-51 | -8.615850e-47 |
| Msa0103070 | Msa0600450 | 0.808704 | 2.717583e-50 | -8.615850e-47 |
| Msa0103070 | Msa0602370 | 0.804761 | 1.849571e-49 | -8.615850e-47 |
| Msa0103070 | Msa0603570 | 0.818004 | 2.457943e-52 | -8.615850e-47 |
| Msa0103070 | Msa0609220 | 0.825653 | 4.168677e-54 | -8.615850e-47 |
| Msa0103070 | Msa0615680 | 0.818685 | 1.723064e-52 | -8.615850e-47 |
| Msa0103070 | Msa0617260 | 0.809310 | 2.015988e-50 | -8.615850e-47 |
| Msa0103070 | Msa0618930 | 0.806474 | 8.082325e-50 | -8.615850e-47 |
| Msa0103070 | Msa0620330 | 0.814646 | 1.385717e-51 | -8.615850e-47 |
| Msa0103070 | Msa0621650 | 0.809490 | 1.843799e-50 | -8.615850e-47 |
| Msa0103070 | Msa0626940 | 0.810239 | 1.272751e-50 | -8.615850e-47 |
| Msa0103070 | Msa0630950 | 0.805182 | 1.510065e-49 | -8.615850e-47 |
| Msa0103070 | Msa0631350 | 0.803390 | 3.566806e-49 | -8.615850e-47 |
| Msa0103070 | Msa0640940 | 0.811548 | 6.627028e-51 | -8.615850e-47 |
| Msa0103070 | Msa0643320 | 0.801235 | 9.909946e-49 | -8.615850e-47 |
| Msa0103070 | Msa0644030 | 0.808121 | 3.618940e-50 | -8.615850e-47 |
| Msa0103070 | Msa0652300 | 0.803046 | 4.201397e-49 | -8.615850e-47 |
| Msa0103070 | Msa0659140 | 0.800475 | 1.416694e-48 | -8.615850e-47 |
| Msa0103070 | Msa0661090 | 0.820121 | 8.108905e-53 | -8.615850e-47 |
| Msa0103070 | Msa0662630 | 0.831240 | 1.866850e-55 | -8.615850e-47 |
| Msa0103070 | Msa0668460 | -0.803388 | 3.570672e-49 | -8.615850e-47 |
| Msa0103070 | Msa0669190 | 0.802733 | 4.875806e-49 | -8.615850e-47 |
| Msa0103070 | Msa0669720 | 0.831002 | 2.136719e-55 | -8.615850e-47 |
| Msa0103070 | Msa0669760 | 0.802125 | 6.507544e-49 | -8.615850e-47 |
| Msa0103070 | Msa0672480 | 0.815319 | 9.825898e-52 | -8.615850e-47 |
| Msa0103070 | Msa0679360 | 0.804682 | 1.920903e-49 | -8.615850e-47 |
| Msa0103070 | Msa0693790 | 0.813924 | 2.001036e-51 | -8.615850e-47 |
| Msa0103070 | Msa0694840 | 0.802857 | 4.596590e-49 | -8.615850e-47 |
| Msa0103070 | Msa0705390 | 0.805752 | 1.146791e-49 | -8.615850e-47 |
| Msa0103070 | Msa0705600 | 0.802221 | 6.217531e-49 | -8.615850e-47 |
| Msa0103070 | Msa0705990 | 0.810406 | 1.171262e-50 | -8.615850e-47 |
| Msa0103070 | Msa0726080 | 0.809441 | 1.889698e-50 | -8.615850e-47 |
| Msa0103070 | Msa0743530 | 0.843972 | 1.008516e-58 | -8.615850e-47 |
| Msa0103070 | Msa0746170 | 0.804444 | 2.153565e-49 | -8.615850e-47 |
| Msa0103070 | Msa0746210 | 0.803194 | 3.916620e-49 | -8.615850e-47 |
| Msa0103070 | Msa0766670 | 0.830405 | 2.991193e-55 | -8.615850e-47 |
| Msa0103070 | Msa0794050 | 0.809831 | 1.557752e-50 | -8.615850e-47 |
| Msa0103070 | Msa0800370 | 0.816717 | 4.788330e-52 | -8.615850e-47 |
| Msa0103070 | Msa0822170 | 0.840841 | 6.820124e-58 | -8.615850e-47 |
| Msa0103070 | Msa0822180 | 0.804410 | 2.188999e-49 | -8.615850e-47 |
| Msa0103070 | Msa0833190 | -0.801010 | 1.101659e-48 | -8.615850e-47 |
| Msa0103070 | Msa0846230 | 0.808986 | 2.365075e-50 | -8.615850e-47 |
| Msa0103070 | Msa0846400 | 0.811392 | 7.163078e-51 | -8.615850e-47 |
| Msa0103070 | Msa0858440 | 0.801769 | 7.702390e-49 | -8.615850e-47 |
| Msa0103070 | Msa0861470 | 0.821130 | 4.754310e-53 | -8.615850e-47 |
| Msa0103070 | Msa0861570 | 0.825596 | 4.299651e-54 | -8.615850e-47 |
| Msa0103070 | Msa0866400 | 0.811152 | 8.075079e-51 | -8.615850e-47 |
| Msa0103070 | Msa0879850 | 0.805464 | 1.318290e-49 | -8.615850e-47 |
| Msa0103070 | Msa0879860 | 0.803340 | 3.653122e-49 | -8.615850e-47 |
| Msa0103070 | Msa0882730 | 0.802122 | 6.516839e-49 | -8.615850e-47 |
| Msa0103070 | Msa0903780 | 0.810154 | 1.327445e-50 | -8.615850e-47 |
| Msa0103070 | Msa0924150 | -0.819512 | 1.117195e-52 | -8.615850e-47 |
| Msa0103070 | Msa0928120 | 0.841482 | 4.627008e-58 | -8.615850e-47 |
| Msa0103070 | Msa0937330 | 0.807358 | 5.254980e-50 | -8.615850e-47 |
| Msa0103070 | Msa0943270 | 0.828201 | 1.025382e-54 | -8.615850e-47 |
| Msa0103070 | Msa0944200 | 0.814382 | 1.585076e-51 | -8.615850e-47 |
| Msa0103070 | Msa0944610 | 0.827863 | 1.237010e-54 | -8.615850e-47 |
| Msa0103070 | Msa0947800 | 0.825610 | 4.268732e-54 | -8.615850e-47 |
| Msa0103070 | Msa0974950 | 0.803756 | 2.994648e-49 | -8.615850e-47 |
| Msa0103070 | Msa0980020 | 0.806418 | 8.306328e-50 | -8.615850e-47 |
| Msa0103070 | Msa0994370 | 0.803912 | 2.779620e-49 | -8.615850e-47 |
| Msa0103070 | Msa1010460 | 0.810893 | 9.191265e-51 | -8.615850e-47 |
| Msa0103070 | Msa1025940 | 0.806823 | 6.821463e-50 | -8.615850e-47 |
| Msa0103070 | Msa1033520 | 0.807733 | 4.376216e-50 | -8.615850e-47 |
| Msa0103070 | Msa1033970 | 0.803153 | 3.992931e-49 | -8.615850e-47 |
| Msa0103070 | Msa1034270 | 0.801397 | 9.177629e-49 | -8.615850e-47 |
| Msa0103070 | Msa1037520 | 0.805135 | 1.544798e-49 | -8.615850e-47 |
| Msa0103070 | Msa1042660 | 0.821442 | 4.028948e-53 | -8.615850e-47 |
| Msa0103070 | Msa1070050 | 0.803068 | 4.158097e-49 | -8.615850e-47 |
| Msa0103070 | Msa1070390 | 0.812926 | 3.316137e-51 | -8.615850e-47 |
| Msa0103070 | Msa1071320 | 0.824323 | 8.590095e-54 | -8.615850e-47 |
| Msa0103070 | Msa1071660 | 0.804033 | 2.623153e-49 | -8.615850e-47 |
| Msa0103070 | Msa1072900 | 0.829817 | 4.163588e-55 | -8.615850e-47 |
| Msa0103070 | Msa1073400 | 0.814815 | 1.271007e-51 | -8.615850e-47 |
| Msa0103070 | Msa1073830 | 0.826261 | 2.988748e-54 | -8.615850e-47 |
| Msa0103070 | Msa1089740 | -0.802065 | 6.694099e-49 | -8.615850e-47 |
| Msa0103070 | Msa1100530 | -0.830282 | 3.207081e-55 | -8.615850e-47 |
| Msa0103070 | Msa1113590 | 0.805675 | 1.190628e-49 | -8.615850e-47 |
| Msa0103070 | Msa1113880 | 0.819683 | 1.021023e-52 | -8.615850e-47 |
| Msa0103070 | Msa1120810 | 0.808478 | 3.036177e-50 | -8.615850e-47 |
| Msa0103070 | Msa1125790 | -0.815026 | 1.141563e-51 | -8.615850e-47 |
| Msa0103070 | Msa1131490 | 0.803645 | 3.158494e-49 | -8.615850e-47 |
| Msa0103070 | Msa1133250 | 0.815288 | 9.981047e-52 | -8.615850e-47 |
| Msa0103070 | Msa1135810 | -0.812492 | 4.126542e-51 | -8.615850e-47 |
| Msa0103070 | Msa1154490 | 0.811070 | 8.414869e-51 | -8.615850e-47 |
| Msa0103070 | Msa1158770 | 0.814582 | 1.431311e-51 | -8.615850e-47 |
| Msa0103070 | Msa1160360 | 0.810675 | 1.024504e-50 | -8.615850e-47 |
| Msa0103070 | Msa1163870 | 0.808290 | 3.330336e-50 | -8.615850e-47 |
| Msa0103070 | Msa1164020 | 0.812664 | 3.783161e-51 | -8.615850e-47 |
| Msa0103070 | Msa1176360 | 0.805055 | 1.605773e-49 | -8.615850e-47 |
| Msa0103070 | Msa1199290 | 0.815401 | 9.419713e-52 | -8.615850e-47 |
| Msa0103070 | Msa1200320 | 0.808164 | 3.543732e-50 | -8.615850e-47 |
| Msa0103070 | Msa1201830 | 0.811642 | 6.321981e-51 | -8.615850e-47 |
| Msa0103070 | Msa1203900 | 0.804999 | 1.649906e-49 | -8.615850e-47 |
| Msa0103070 | Msa1205480 | 0.823681 | 1.215343e-53 | -8.615850e-47 |
| Msa0103070 | Msa1205590 | 0.812613 | 3.881621e-51 | -8.615850e-47 |
| Msa0103070 | Msa1206650 | 0.851856 | 6.757036e-61 | -8.615850e-47 |
| Msa0103070 | Msa1207730 | 0.816055 | 6.735497e-52 | -8.615850e-47 |
| Msa0103070 | Msa1211830 | 0.808909 | 2.457089e-50 | -8.615850e-47 |
| Msa0103070 | Msa1214320 | 0.814174 | 1.761816e-51 | -8.615850e-47 |
| Msa0103070 | Msa1226610 | 0.804244 | 2.370548e-49 | -8.615850e-47 |
| Msa0103070 | Msa1250110 | 0.828186 | 1.033841e-54 | -8.615850e-47 |
| Msa0103070 | Msa1250730 | 0.819982 | 8.722828e-53 | -8.615850e-47 |
| Msa0103070 | Msa1253810 | 0.833118 | 6.408421e-56 | -8.615850e-47 |
| Msa0103070 | Msa1270660 | 0.804386 | 2.214650e-49 | -8.615850e-47 |
| Msa0103070 | Msa1297530 | 0.812449 | 4.216424e-51 | -8.615850e-47 |
| Msa0103070 | Msa1307180 | 0.811629 | 6.362966e-51 | -8.615850e-47 |
| Msa0103070 | Msa1310690 | 0.811783 | 5.891615e-51 | -8.615850e-47 |
| Msa0103070 | Msa1316360 | 0.804090 | 2.552610e-49 | -8.615850e-47 |
| Msa0103070 | Msa1323990 | 0.800159 | 1.642813e-48 | -8.615850e-47 |
| Msa0103070 | Msa1331280 | 0.830018 | 3.719333e-55 | -8.615850e-47 |
| Msa0103070 | Msa1331350 | 0.801074 | 1.068851e-48 | -8.615850e-47 |
| Msa0103070 | Msa1336560 | 0.818327 | 2.077254e-52 | -8.615850e-47 |
| Msa0103070 | Msa1340830 | 0.819378 | 1.198312e-52 | -8.615850e-47 |
| Msa0103070 | Msa1359270 | 0.817917 | 2.571965e-52 | -8.615850e-47 |
| Msa0103070 | Msa1362420 | 0.811613 | 6.413316e-51 | -8.615850e-47 |
| Msa0103070 | Msa1365860 | 0.824113 | 9.621988e-54 | -8.615850e-47 |
| Msa0103070 | Msa1370590 | 0.804626 | 1.973939e-49 | -8.615850e-47 |
| Msa0103070 | Msa1381650 | 0.816074 | 6.669099e-52 | -8.615850e-47 |
| Msa0103070 | Msa1382790 | 0.805057 | 1.604021e-49 | -8.615850e-47 |
| Msa0103070 | Msa1384100 | 0.801824 | 7.503239e-49 | -8.615850e-47 |
| Msa0103070 | Msa1385350 | 0.812593 | 3.921321e-51 | -8.615850e-47 |
| Msa0103070 | Msa1396940 | 0.814939 | 1.193009e-51 | -8.615850e-47 |
| Msa0103070 | Msa1411950 | 0.808025 | 3.792803e-50 | -8.615850e-47 |
| Msa0103070 | Msa1416260 | 0.831384 | 1.720962e-55 | -8.615850e-47 |
| Msa0103070 | Msa1418960 | -0.804417 | 2.182394e-49 | -8.615850e-47 |
| Msa0103070 | Msa1422810 | 0.801278 | 9.711576e-49 | -8.615850e-47 |
| Msa0103070 | Msa1444120 | 0.809894 | 1.509902e-50 | -8.615850e-47 |
| Msa0103070 | Msa1447890 | 0.833306 | 5.752479e-56 | -8.615850e-47 |
| Msa0103070 | Msa1454450 | 0.814227 | 1.715629e-51 | -8.615850e-47 |
| Msa0103070 | Msa1454960 | 0.802059 | 6.714878e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103070 | MtrunA17_Chr1g0146471 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 1.05e-85 | 245 |
| Msa0103070 | MtrunA17_Chr3g0140601 | 68.376 | 117 | 35 | 2 | 1 | 115 | 1 | 117 | 2.53e-54 | 166 |
| Msa0103070 | MtrunA17_Chr4g0063331 | 58.750 | 80 | 33 | 0 | 26 | 105 | 21 | 100 | 8.31e-25 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0103070 | AT5G25940.1 | 68.041 | 97 | 29 | 1 | 14 | 108 | 12 | 108 | 3.74e-29 | 102 |
Find 48 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGTACGACTTTGCTTTC+TGG | 0.091728 | 1_3:+10096922 | Msa0103070:three_prime_UTR |
| CATCTCAACTTTGGTGTTCT+TGG | 0.192946 | 1_3:+10097128 | Msa0103070:three_prime_UTR |
| TGTTGTGTAACAGTTATATT+TGG | 0.201564 | 1_3:+10096997 | Msa0103070:three_prime_UTR |
| CCTGTACGACTTTGCTTTCT+GGG | 0.225724 | 1_3:+10096923 | Msa0103070:three_prime_UTR |
| GGAGAAAACAAAATTGAATT+TGG | 0.233532 | 1_3:-10094036 | None:intergenic |
| AATAATAAATGAATTTCTTT+TGG | 0.261264 | 1_3:-10094203 | None:intergenic |
| TGGAATTGCGGTGACGATAT+TGG | 0.338526 | 1_3:-10093931 | None:intergenic |
| TGCGGTGACGATATTGGTTT+GGG | 0.339692 | 1_3:-10093925 | None:intergenic |
| GAAGCTGCTTTACTCGTTGC+TGG | 0.345829 | 1_3:+10096865 | Msa0103070:exon |
| TTGCGGTGACGATATTGGTT+TGG | 0.346040 | 1_3:-10093926 | None:intergenic |
| GCTTTACTCGTTGCTGGTCT+TGG | 0.353662 | 1_3:+10096871 | Msa0103070:three_prime_UTR |
| GTAAGTAGCGGGTAATATAA+TGG | 0.366704 | 1_3:-10094092 | None:intergenic |
| CACTGCTGATAAAACTATCT+TGG | 0.370507 | 1_3:+10096775 | Msa0103070:CDS |
| AAAGCCACTCCACTAATTAC+TGG | 0.374663 | 1_3:-10097030 | None:intergenic |
| TTCAGAACTTAGAGATGCTT+GGG | 0.386088 | 1_3:+10094177 | Msa0103070:CDS |
| CTTCAGAACTTAGAGATGCT+TGG | 0.415026 | 1_3:+10094176 | Msa0103070:CDS |
| CTCAACTTTGGTGTTCTTGG+TGG | 0.421981 | 1_3:+10097131 | Msa0103070:three_prime_UTR |
| TTTCTATCACATCTCAACTT+TGG | 0.432124 | 1_3:+10097119 | Msa0103070:three_prime_UTR |
| TAAGTAGCGGGTAATATAAT+GGG | 0.441398 | 1_3:-10094091 | None:intergenic |
| CTGCTGTTCGCATGATTCCA+TGG | 0.443299 | 1_3:+10096148 | Msa0103070:CDS |
| AAAATCTTCCTCTCTTCATC+AGG | 0.443350 | 1_3:-10094232 | None:intergenic |
| GTGATAGAAAATTAAACAAA+TGG | 0.469427 | 1_3:-10097106 | None:intergenic |
| AGGTGTGCGTGCTGGATTCA+AGG | 0.476456 | 1_3:+10095322 | Msa0103070:CDS |
| AGTGGAGTGGCTTTATAAAG+AGG | 0.480251 | 1_3:+10097039 | Msa0103070:three_prime_UTR |
| TGCTTTCTGGGTCTGTCTCG+TGG | 0.485290 | 1_3:+10096935 | Msa0103070:three_prime_UTR |
| CCCAGAAAGCAAAGTCGTAC+AGG | 0.489539 | 1_3:-10096923 | None:intergenic |
| TTGAGGTTTGCCTTTGCCCA+TGG | 0.506394 | 1_3:-10096165 | None:intergenic |
| ATTGCTACTCCAGTAATTAG+TGG | 0.516108 | 1_3:+10097021 | Msa0103070:three_prime_UTR |
| CAAGCATCTCTAAGTTCTGA+AGG | 0.519720 | 1_3:-10094175 | None:intergenic |
| GTGCCTGAGCGGTATAATTG+AGG | 0.519973 | 1_3:-10096182 | None:intergenic |
| GAATGATTGAAGGTATCAAT+CGG | 0.523943 | 1_3:-10094004 | None:intergenic |
| AAGCTTTATTCGTAAGTAGC+GGG | 0.528498 | 1_3:-10094103 | None:intergenic |
| GTGTGAAAATGAATGATTGA+AGG | 0.529823 | 1_3:-10094014 | None:intergenic |
| TATGCAGAAGGTGTGCGTGC+TGG | 0.548386 | 1_3:+10095314 | Msa0103070:intron |
| TGCTGTTCGCATGATTCCAT+GGG | 0.558562 | 1_3:+10096149 | Msa0103070:CDS |
| CAGGCACTTATCATATCTGC+TGG | 0.561453 | 1_3:+10096198 | Msa0103070:CDS |
| AAACCTCAATTATACCGCTC+AGG | 0.563012 | 1_3:+10096179 | Msa0103070:CDS |
| TACTCCAGTAATTAGTGGAG+TGG | 0.607183 | 1_3:+10097026 | Msa0103070:three_prime_UTR |
| TTGCTTCTCCTGATGAAGAG+AGG | 0.611181 | 1_3:+10094224 | Msa0103070:CDS |
| TCGCATGATTCCATGGGCAA+AGG | 0.613193 | 1_3:+10096155 | Msa0103070:CDS |
| TTTCTATTAGCCGACAACGA+TGG | 0.623542 | 1_3:-10094057 | None:intergenic |
| GAAGCTTTATTCGTAAGTAG+CGG | 0.628755 | 1_3:-10094104 | None:intergenic |
| AGTACTGACAACGCATGCAA+CGG | 0.637303 | 1_3:-10095351 | None:intergenic |
| TCTGAGACACCATCGTGACA+CGG | 0.644860 | 1_3:+10096832 | Msa0103070:CDS |
| ACTGACAACGCATGCAACGG+CGG | 0.656885 | 1_3:-10095348 | None:intergenic |
| TGATTGAAGGTATCAATCGG+TGG | 0.672127 | 1_3:-10094001 | None:intergenic |
| AGATATGATAAGTGCCTGAG+CGG | 0.693268 | 1_3:-10096193 | None:intergenic |
| AAGATGAAACCGTGTCACGA+TGG | 0.695013 | 1_3:-10096841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAATGAATTTCTTT+TGG | - | chr1_3:10094206-10094225 | None:intergenic | 10.0% |
| !!! | TTAAAATGTTATTTATTATG+TGG | + | chr1_3:10094347-10094366 | Msa0103070:intron | 10.0% |
| !!! | TAAAATGTTATTTATTATGT+GGG | + | chr1_3:10094348-10094367 | Msa0103070:intron | 10.0% |
| !! | AATATAAATTAAAGTACAAA+AGG | - | chr1_3:10096612-10096631 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAAAGAAAAAAAA+GGG | - | chr1_3:10096655-10096674 | None:intergenic | 10.0% |
| !!! | TATTTTTTGAAAGAAAAAAA+AGG | - | chr1_3:10096656-10096675 | None:intergenic | 10.0% |
| !! | ACAATAACAAAAAGAAAAAA+TGG | + | chr1_3:10094147-10094166 | Msa0103070:exon | 15.0% |
| !! | CAATAACAAAAAGAAAAAAT+GGG | + | chr1_3:10094148-10094167 | Msa0103070:exon | 15.0% |
| !!! | AATTTATTAGTTGATGATTA+TGG | + | chr1_3:10094413-10094432 | Msa0103070:intron | 15.0% |
| !! | AAATCAATGTTAAACTTTAT+TGG | + | chr1_3:10094941-10094960 | Msa0103070:intron | 15.0% |
| !! | ATTGATAAAAATGAAAATCT+AGG | - | chr1_3:10095181-10095200 | None:intergenic | 15.0% |
| !!! | TCTTAATCATACTTTTAATT+GGG | - | chr1_3:10095995-10096014 | None:intergenic | 15.0% |
| !!! | TTCTTAATCATACTTTTAAT+TGG | - | chr1_3:10095996-10096015 | None:intergenic | 15.0% |
| !! | ATAAAATTAAAACTCATGAA+GGG | - | chr1_3:10096096-10096115 | None:intergenic | 15.0% |
| !! | AATAAAATTAAAACTCATGA+AGG | - | chr1_3:10096097-10096116 | None:intergenic | 15.0% |
| !!! | TTTAATTTTATTTGATGTTG+AGG | + | chr1_3:10096105-10096124 | Msa0103070:intron | 15.0% |
| !!! | AGAAAAATAAATCTTTTGAA+TGG | + | chr1_3:10096289-10096308 | Msa0103070:intron | 15.0% |
| !!! | AGAAAGTTAAGATTTTAATT+TGG | - | chr1_3:10096467-10096486 | None:intergenic | 15.0% |
| !!! | AATACCATTAGTACATTTTT+TGG | - | chr1_3:10094263-10094282 | None:intergenic | 20.0% |
| !!! | AATTTTTTTGGTTAGGATTT+GGG | + | chr1_3:10094667-10094686 | Msa0103070:intron | 20.0% |
| !!! | ATTTTCTCAAATTATTGCTA+TGG | + | chr1_3:10095080-10095099 | Msa0103070:intron | 20.0% |
| !! | CAGAAATAAAGACAATTATT+TGG | - | chr1_3:10095155-10095174 | None:intergenic | 20.0% |
| !! | AAAGAAAAATTACTTACTGT+TGG | - | chr1_3:10095380-10095399 | None:intergenic | 20.0% |
| !!! | TTTAAGACATTGGTTTTTTA+CGG | + | chr1_3:10095584-10095603 | Msa0103070:intron | 20.0% |
| !! | TTATTGTTGAAAATAACACT+GGG | + | chr1_3:10096059-10096078 | Msa0103070:intron | 20.0% |
| !! | TAAAATTAAAACTCATGAAG+GGG | - | chr1_3:10096095-10096114 | None:intergenic | 20.0% |
| !! | GTGATAGAAAATTAAACAAA+TGG | - | chr1_3:10097109-10097128 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCGTTCAAGTT+TGG | - | chr1_3:10093969-10093988 | None:intergenic | 25.0% |
| ! | GGAGAAAACAAAATTGAATT+TGG | - | chr1_3:10094039-10094058 | None:intergenic | 25.0% |
| ! | AGAACCAAAAAATGTACTAA+TGG | + | chr1_3:10094256-10094275 | Msa0103070:CDS | 25.0% |
| ! | ACCAAAAAAATTCAGAATGT+TGG | - | chr1_3:10094659-10094678 | None:intergenic | 25.0% |
| !!! | CATTCTGAATTTTTTTGGTT+AGG | + | chr1_3:10094660-10094679 | Msa0103070:intron | 25.0% |
| !!! | GAATTTTTTTGGTTAGGATT+TGG | + | chr1_3:10094666-10094685 | Msa0103070:intron | 25.0% |
| ! | TCAAATTCGAAGAAAAACAA+TGG | + | chr1_3:10094824-10094843 | Msa0103070:intron | 25.0% |
| !! | TTCAAGAATTATTTTCCAAC+AGG | - | chr1_3:10094879-10094898 | None:intergenic | 25.0% |
| ! | GTTGGAAAATAATTCTTGAA+TGG | + | chr1_3:10094879-10094898 | Msa0103070:intron | 25.0% |
| !!! | TTCATTTTTATCAATAGAGC+AGG | + | chr1_3:10095186-10095205 | Msa0103070:intron | 25.0% |
| ! | TAACAATGTTAGATAACATG+TGG | - | chr1_3:10095219-10095238 | None:intergenic | 25.0% |
| ! | TTCATATTTCTCATGATATC+AGG | - | chr1_3:10095262-10095281 | None:intergenic | 25.0% |
| !! | CAGTAAGTAATTTTTCTTTC+CGG | + | chr1_3:10095381-10095400 | Msa0103070:intron | 25.0% |
| !!! | TTAAGACATTGGTTTTTTAC+GGG | + | chr1_3:10095585-10095604 | Msa0103070:intron | 25.0% |
| ! | CTTAAAAAACATGTAACAAG+AGG | - | chr1_3:10095651-10095670 | None:intergenic | 25.0% |
| !!! | TGTTACATGTTTTTTAAGAG+TGG | + | chr1_3:10095653-10095672 | Msa0103070:intron | 25.0% |
| ! | GATGTTCAATCTTATAAGAT+CGG | - | chr1_3:10095909-10095928 | None:intergenic | 25.0% |
| ! | GTTATTGTTGAAAATAACAC+TGG | + | chr1_3:10096058-10096077 | Msa0103070:intron | 25.0% |
| ! | TTTGAATGGTAATTTAAGCA+TGG | + | chr1_3:10096303-10096322 | Msa0103070:intron | 25.0% |
| !!! | ATAAGAATTTGTTAATGTGC+TGG | - | chr1_3:10096374-10096393 | None:intergenic | 25.0% |
| ! | AATTCATTGAAGTATGAATG+TGG | + | chr1_3:10096417-10096436 | Msa0103070:intron | 25.0% |
| !!! | GTTAAGATTTTAATTTGGAG+TGG | - | chr1_3:10096462-10096481 | None:intergenic | 25.0% |
| ! | TTTGAATGCATTATTTACAC+TGG | + | chr1_3:10096712-10096731 | Msa0103070:intron | 25.0% |
| ! | TGTTGTGTAACAGTTATATT+TGG | + | chr1_3:10096997-10097016 | Msa0103070:three_prime_UTR | 25.0% |
| !! | GAATGATTGAAGGTATCAAT+CGG | - | chr1_3:10094007-10094026 | None:intergenic | 30.0% |
| GTGTGAAAATGAATGATTGA+AGG | - | chr1_3:10094017-10094036 | None:intergenic | 30.0% | |
| !! | TAAGTAGCGGGTAATATAAT+GGG | - | chr1_3:10094094-10094113 | None:intergenic | 30.0% |
| !! | TAGTTGATGATTATGGTTAG+AGG | + | chr1_3:10094420-10094439 | Msa0103070:intron | 30.0% |
| !! | TTATGGTTAGAGGTATTTGT+TGG | + | chr1_3:10094430-10094449 | Msa0103070:intron | 30.0% |
| !!! | GGTTGATGATTTTTTCTGTT+CGG | + | chr1_3:10094451-10094470 | Msa0103070:intron | 30.0% |
| ! | TTAGTTGATTAGTTGGTTCT+TGG | - | chr1_3:10094485-10094504 | None:intergenic | 30.0% |
| ACCAACTAATCAACTAATCT+AGG | + | chr1_3:10094488-10094507 | Msa0103070:intron | 30.0% | |
| CCAACTAATCAACTAATCTA+GGG | + | chr1_3:10094489-10094508 | Msa0103070:intron | 30.0% | |
| !!! | GCCAACATTCTGAATTTTTT+TGG | + | chr1_3:10094655-10094674 | Msa0103070:intron | 30.0% |
| ! | TTTCTTCGAATTTGAGTTCT+AGG | - | chr1_3:10094819-10094838 | None:intergenic | 30.0% |
| ! | ATTTTCCAACAGGAACAAAA+GGG | - | chr1_3:10094869-10094888 | None:intergenic | 30.0% |
| ! | TATTTTCCAACAGGAACAAA+AGG | - | chr1_3:10094870-10094889 | None:intergenic | 30.0% |
| !! | TATTTTACTTTTCCGCTGTT+TGG | + | chr1_3:10094916-10094935 | Msa0103070:intron | 30.0% |
| !! | AACTTTATTGGACTAGCTTA+AGG | + | chr1_3:10094953-10094972 | Msa0103070:intron | 30.0% |
| TTGTTATGATATGCTGTCAA+AGG | + | chr1_3:10095233-10095252 | Msa0103070:intron | 30.0% | |
| TGTTATGATATGCTGTCAAA+GGG | + | chr1_3:10095234-10095253 | Msa0103070:intron | 30.0% | |
| TATCTTTATTAGCAAGTCTC+CGG | - | chr1_3:10095403-10095422 | None:intergenic | 30.0% | |
| AACAATGTTATGCAGTTTCA+TGG | + | chr1_3:10095467-10095486 | Msa0103070:intron | 30.0% | |
| CAATAAGCAGAAGAAATACA+TGG | - | chr1_3:10095519-10095538 | None:intergenic | 30.0% | |
| CATGTATTTCTTCTGCTTAT+TGG | + | chr1_3:10095517-10095536 | Msa0103070:intron | 30.0% | |
| TGTGAAATTGACCAATCATA+TGG | + | chr1_3:10095721-10095740 | Msa0103070:intron | 30.0% | |
| !! | CTTGGTCTTATTAAAGAACA+AGG | - | chr1_3:10095849-10095868 | None:intergenic | 30.0% |
| GTAAAATAGTGATAGGAACT+TGG | - | chr1_3:10095867-10095886 | None:intergenic | 30.0% | |
| TCTTATAAGATTGAACATCC+TGG | + | chr1_3:10095910-10095929 | Msa0103070:intron | 30.0% | |
| GAAGCAAGAAACAATAAATC+AGG | + | chr1_3:10096345-10096364 | Msa0103070:intron | 30.0% | |
| !! | AGTTTTCTTCTTTGTTGCTT+CGG | + | chr1_3:10096568-10096587 | Msa0103070:intron | 30.0% |
| ! | GCTTTATAAAGAGGATTTTG+TGG | + | chr1_3:10097048-10097067 | Msa0103070:three_prime_UTR | 30.0% |
| TTTCTATCACATCTCAACTT+TGG | + | chr1_3:10097119-10097138 | Msa0103070:three_prime_UTR | 30.0% | |
| ! | CAGCAATTTTCATGGAATTG+CGG | - | chr1_3:10093946-10093965 | None:intergenic | 35.0% |
| ! | AAGTTTGGCAGCAATTTTCA+TGG | - | chr1_3:10093954-10093973 | None:intergenic | 35.0% |
| !! | TTTGTTTTCTCCATCGTTGT+CGG | + | chr1_3:10094047-10094066 | Msa0103070:five_prime_UTR | 35.0% |
| !! | GTAAGTAGCGGGTAATATAA+TGG | - | chr1_3:10094095-10094114 | None:intergenic | 35.0% |
| !! | AAGCTTTATTCGTAAGTAGC+GGG | - | chr1_3:10094106-10094125 | None:intergenic | 35.0% |
| !! | GAAGCTTTATTCGTAAGTAG+CGG | - | chr1_3:10094107-10094126 | None:intergenic | 35.0% |
| TTCAGAACTTAGAGATGCTT+GGG | + | chr1_3:10094177-10094196 | Msa0103070:CDS | 35.0% | |
| AAAATCTTCCTCTCTTCATC+AGG | - | chr1_3:10094235-10094254 | None:intergenic | 35.0% | |
| !!! | GATTTTTTCTGTTCGGTATC+CGG | + | chr1_3:10094458-10094477 | Msa0103070:intron | 35.0% |
| ! | CCCTAGATTAGTTGATTAGT+TGG | - | chr1_3:10094492-10094511 | None:intergenic | 35.0% |
| !!! | GTATTTCATGAGCTAGCTTT+TGG | + | chr1_3:10094716-10094735 | Msa0103070:intron | 35.0% |
| !!! | GTATTTCTTGAGCTAGCTTT+TGG | + | chr1_3:10094781-10094800 | Msa0103070:intron | 35.0% |
| !!! | ACATTGATTTTGCCAAACAG+CGG | - | chr1_3:10094931-10094950 | None:intergenic | 35.0% |
| ! | AAGGTAATGCATGTTTTCCA+TGG | + | chr1_3:10094972-10094991 | Msa0103070:intron | 35.0% |
| ! | AGGTAATGCATGTTTTCCAT+GGG | + | chr1_3:10094973-10094992 | Msa0103070:intron | 35.0% |
| TTGAATGTAACCACAAGTGT+CGG | - | chr1_3:10095052-10095071 | None:intergenic | 35.0% | |
| ACCTTCTGCATATCAAGAAA+AGG | - | chr1_3:10095306-10095325 | None:intergenic | 35.0% | |
| TTTCACCAATTATGCAGACA+TGG | - | chr1_3:10095546-10095565 | None:intergenic | 35.0% | |
| TTGGTGAAAGAATGTCTTTC+AGG | + | chr1_3:10095557-10095576 | Msa0103070:intron | 35.0% | |
| TGGTGAAAGAATGTCTTTCA+GGG | + | chr1_3:10095558-10095577 | Msa0103070:intron | 35.0% | |
| TTCTCTATCAAACATCACGT+TGG | - | chr1_3:10095687-10095706 | None:intergenic | 35.0% | |
| CTCTGTAGTGTTGTAATCAA+GGG | + | chr1_3:10095817-10095836 | Msa0103070:intron | 35.0% | |
| ATTGTTCTTCAACACAAACC+AGG | - | chr1_3:10095931-10095950 | None:intergenic | 35.0% | |
| ACACTAAAAGAGGTTTCAGA+AGG | - | chr1_3:10095957-10095976 | None:intergenic | 35.0% | |
| TTTAATTGGGTTTCAGAAGC+TGG | - | chr1_3:10095982-10096001 | None:intergenic | 35.0% | |
| CCATTATCATCCACAAACAT+CGG | - | chr1_3:10096038-10096057 | None:intergenic | 35.0% | |
| CGATGTTTGTGGATGATAAT+GGG | + | chr1_3:10096036-10096055 | Msa0103070:intron | 35.0% | |
| ! | AGGTCTTCAAATTTTGCAGT+TGG | + | chr1_3:10096125-10096144 | Msa0103070:intron | 35.0% |
| !! | GTAAGGAGCAAACCATTTTT+CGG | + | chr1_3:10096513-10096532 | Msa0103070:intron | 35.0% |
| !! | TAAGGAGCAAACCATTTTTC+GGG | + | chr1_3:10096514-10096533 | Msa0103070:intron | 35.0% |
| GCAAAAAGAGTCAAACTGAA+TGG | - | chr1_3:10096686-10096705 | None:intergenic | 35.0% | |
| ! | GCATTATTTACACTGGTTGT+TGG | + | chr1_3:10096719-10096738 | Msa0103070:intron | 35.0% |
| ! | TATTTACACTGGTTGTTGGT+TGG | + | chr1_3:10096723-10096742 | Msa0103070:intron | 35.0% |
| CACTGCTGATAAAACTATCT+TGG | + | chr1_3:10096775-10096794 | Msa0103070:CDS | 35.0% | |
| ATTGCTACTCCAGTAATTAG+TGG | + | chr1_3:10097021-10097040 | Msa0103070:three_prime_UTR | 35.0% | |
| !! | TGATTGAAGGTATCAATCGG+TGG | - | chr1_3:10094004-10094023 | None:intergenic | 40.0% |
| TTTCTATTAGCCGACAACGA+TGG | - | chr1_3:10094060-10094079 | None:intergenic | 40.0% | |
| ! | CAAGCATCTCTAAGTTCTGA+AGG | - | chr1_3:10094178-10094197 | None:intergenic | 40.0% |
| CTTCAGAACTTAGAGATGCT+TGG | + | chr1_3:10094176-10094195 | Msa0103070:CDS | 40.0% | |
| ! | TGATTAGTTGGTTCTTGGAC+CGG | - | chr1_3:10094480-10094499 | None:intergenic | 40.0% |
| TCGAATCAGCCAACTTATGT+GGG | - | chr1_3:10094552-10094571 | None:intergenic | 40.0% | |
| TTCGAATCAGCCAACTTATG+TGG | - | chr1_3:10094553-10094572 | None:intergenic | 40.0% | |
| AGCAACAAAACCACATGGAT+TGG | - | chr1_3:10094628-10094647 | None:intergenic | 40.0% | |
| GCTAGCTCATGAAATACAAG+TGG | - | chr1_3:10094713-10094732 | None:intergenic | 40.0% | |
| GCTAGCTCAAGAAATACAAG+TGG | - | chr1_3:10094778-10094797 | None:intergenic | 40.0% | |
| !!! | CTAGCTTTTGGAGTTGTGTT+AGG | + | chr1_3:10094728-10094747 | Msa0103070:intron | 40.0% |
| ! | TCATTCCCTTTTGTTCCTGT+TGG | + | chr1_3:10094861-10094880 | Msa0103070:intron | 40.0% |
| ! | ACACCTTCAATCTGAAGTGT+TGG | - | chr1_3:10095009-10095028 | None:intergenic | 40.0% |
| ATTATTGCTATGGTCGCGTA+TGG | + | chr1_3:10095090-10095109 | Msa0103070:intron | 40.0% | |
| ! | TTGCGTTGGTGCTTCATAAT+TGG | + | chr1_3:10095122-10095141 | Msa0103070:intron | 40.0% |
| CAAGAAAAGGCTAAAGCGTA+AGG | - | chr1_3:10095293-10095312 | None:intergenic | 40.0% | |
| ! | GCCTTTTCTTGATATGCAGA+AGG | + | chr1_3:10095302-10095321 | Msa0103070:intron | 40.0% |
| !! | TTCAGGGCTCTTTAAGACAT+TGG | + | chr1_3:10095574-10095593 | Msa0103070:intron | 40.0% |
| ! | TGCAATTTTACACCACCAAC+AGG | + | chr1_3:10095609-10095628 | Msa0103070:intron | 40.0% |
| ! | AATTGCTACTTGATGCCTGT+TGG | - | chr1_3:10095627-10095646 | None:intergenic | 40.0% |
| TGTCACGAACACCATATGAT+TGG | - | chr1_3:10095735-10095754 | None:intergenic | 40.0% | |
| TTAAGAGAGTTGTGTCCCTT+AGG | + | chr1_3:10095769-10095788 | Msa0103070:intron | 40.0% | |
| CTACACCTCTAAATGCCTAA+GGG | - | chr1_3:10095787-10095806 | None:intergenic | 40.0% | |
| TCTACACCTCTAAATGCCTA+AGG | - | chr1_3:10095788-10095807 | None:intergenic | 40.0% | |
| GCTCTGTAGTGTTGTAATCA+AGG | + | chr1_3:10095816-10095835 | Msa0103070:intron | 40.0% | |
| CGTTCGGGTAAAATAGTGAT+AGG | - | chr1_3:10095874-10095893 | None:intergenic | 40.0% | |
| !!! | TCGGTTTTGAGTACTACGTT+CGG | - | chr1_3:10095890-10095909 | None:intergenic | 40.0% |
| GAAGCTGGTAACACTAAAAG+AGG | - | chr1_3:10095967-10095986 | None:intergenic | 40.0% | |
| TATCATCCACAAACATCGGA+GGG | - | chr1_3:10096034-10096053 | None:intergenic | 40.0% | |
| TTATCATCCACAAACATCGG+AGG | - | chr1_3:10096035-10096054 | None:intergenic | 40.0% | |
| CCGATGTTTGTGGATGATAA+TGG | + | chr1_3:10096035-10096054 | Msa0103070:intron | 40.0% | |
| AAACCTCAATTATACCGCTC+AGG | + | chr1_3:10096179-10096198 | Msa0103070:CDS | 40.0% | |
| AGATATGATAAGTGCCTGAG+CGG | - | chr1_3:10096196-10096215 | None:intergenic | 40.0% | |
| ACAAAGCAAGGAAGACTGAA+GGG | - | chr1_3:10096495-10096514 | None:intergenic | 40.0% | |
| TACAAAGCAAGGAAGACTGA+AGG | - | chr1_3:10096496-10096515 | None:intergenic | 40.0% | |
| TCAGTCTTCCTTGCTTTGTA+AGG | + | chr1_3:10096496-10096515 | Msa0103070:intron | 40.0% | |
| ! | AGCGAAAACAAAGGAAGCAT+AGG | - | chr1_3:10096542-10096561 | None:intergenic | 40.0% |
| ACTGAATGCAGCGAAAACAA+AGG | - | chr1_3:10096551-10096570 | None:intergenic | 40.0% | |
| TACTCCAGTAATTAGTGGAG+TGG | + | chr1_3:10097026-10097045 | Msa0103070:three_prime_UTR | 40.0% | |
| AAAGCCACTCCACTAATTAC+TGG | - | chr1_3:10097033-10097052 | None:intergenic | 40.0% | |
| !! | AGTGGAGTGGCTTTATAAAG+AGG | + | chr1_3:10097039-10097058 | Msa0103070:three_prime_UTR | 40.0% |
| !! | CATCTCAACTTTGGTGTTCT+TGG | + | chr1_3:10097128-10097147 | Msa0103070:three_prime_UTR | 40.0% |
| !! | TGCGGTGACGATATTGGTTT+GGG | - | chr1_3:10093928-10093947 | None:intergenic | 45.0% |
| ! | TTGCGGTGACGATATTGGTT+TGG | - | chr1_3:10093929-10093948 | None:intergenic | 45.0% |
| TGGAATTGCGGTGACGATAT+TGG | - | chr1_3:10093934-10093953 | None:intergenic | 45.0% | |
| TTGCTTCTCCTGATGAAGAG+AGG | + | chr1_3:10094224-10094243 | Msa0103070:CDS | 45.0% | |
| ! | TATAGAGCTTTGCTCTGGGT+GGG | - | chr1_3:10094521-10094540 | None:intergenic | 45.0% |
| ACCCAGAGCAAAGCTCTATA+GGG | + | chr1_3:10094521-10094540 | Msa0103070:intron | 45.0% | |
| TCCCTATAGAGCTTTGCTCT+GGG | - | chr1_3:10094525-10094544 | None:intergenic | 45.0% | |
| TTCGAACCTGAGACCTTAAC+AGG | + | chr1_3:10094567-10094586 | Msa0103070:intron | 45.0% | |
| CTTAGAGCGTACTCCTGTTA+AGG | - | chr1_3:10094583-10094602 | None:intergenic | 45.0% | |
| ! | CTTAACAGGAGTACGCTCTA+AGG | + | chr1_3:10094581-10094600 | Msa0103070:intron | 45.0% |
| GCTCAAGCAACAAAACCACA+TGG | - | chr1_3:10094633-10094652 | None:intergenic | 45.0% | |
| GCACCAACACTTCAGATTGA+AGG | + | chr1_3:10095003-10095022 | Msa0103070:intron | 45.0% | |
| ! | CTTCAGATTGAAGGTGTGTC+CGG | + | chr1_3:10095012-10095031 | Msa0103070:intron | 45.0% |
| TATGGTGTCCATGTTTGCGT+TGG | + | chr1_3:10095108-10095127 | Msa0103070:intron | 45.0% | |
| ! | ATGAAGCACCAACGCAAACA+TGG | - | chr1_3:10095119-10095138 | None:intergenic | 45.0% |
| !! | AGTACTGACAACGCATGCAA+CGG | - | chr1_3:10095354-10095373 | None:intergenic | 45.0% |
| GGTGTCCATGTCTGCATAAT+TGG | + | chr1_3:10095538-10095557 | Msa0103070:intron | 45.0% | |
| TGTGTCCCTTAGGCATTTAG+AGG | + | chr1_3:10095779-10095798 | Msa0103070:intron | 45.0% | |
| !!! | CGGTTTTGAGTACTACGTTC+GGG | - | chr1_3:10095889-10095908 | None:intergenic | 45.0% |
| TGCTGTTCGCATGATTCCAT+GGG | + | chr1_3:10096149-10096168 | Msa0103070:CDS | 45.0% | |
| CAGGCACTTATCATATCTGC+TGG | + | chr1_3:10096198-10096217 | Msa0103070:CDS | 45.0% | |
| ! | GGTTTGCTCCTTACAAAGCA+AGG | - | chr1_3:10096507-10096526 | None:intergenic | 45.0% |
| AAGCATAGGAGCCCGAAAAA+TGG | - | chr1_3:10096528-10096547 | None:intergenic | 45.0% | |
| AAGATGAAACCGTGTCACGA+TGG | - | chr1_3:10096844-10096863 | None:intergenic | 45.0% | |
| ACCTGTACGACTTTGCTTTC+TGG | + | chr1_3:10096922-10096941 | Msa0103070:three_prime_UTR | 45.0% | |
| CCTGTACGACTTTGCTTTCT+GGG | + | chr1_3:10096923-10096942 | Msa0103070:three_prime_UTR | 45.0% | |
| !! | CTCAACTTTGGTGTTCTTGG+TGG | + | chr1_3:10097131-10097150 | Msa0103070:three_prime_UTR | 45.0% |
| ! | ATAGAGCTTTGCTCTGGGTG+GGG | - | chr1_3:10094520-10094539 | None:intergenic | 50.0% |
| ! | CTATAGAGCTTTGCTCTGGG+TGG | - | chr1_3:10094522-10094541 | None:intergenic | 50.0% |
| CACCCAGAGCAAAGCTCTAT+AGG | + | chr1_3:10094520-10094539 | Msa0103070:intron | 50.0% | |
| GTCCCTATAGAGCTTTGCTC+TGG | - | chr1_3:10094526-10094545 | None:intergenic | 50.0% | |
| !! | AGGGACTAGCCCACATAAGT+TGG | + | chr1_3:10094540-10094559 | Msa0103070:intron | 50.0% |
| CGTACTCCTGTTAAGGTCTC+AGG | - | chr1_3:10094576-10094595 | None:intergenic | 50.0% | |
| !! | TGTTGGTGCTACATAGCCCA+TGG | - | chr1_3:10094992-10095011 | None:intergenic | 50.0% |
| ! | TGCTACTTGATGCCTGTTGG+TGG | - | chr1_3:10095624-10095643 | None:intergenic | 50.0% |
| GTGTAACCCTCCGATGTTTG+TGG | + | chr1_3:10096025-10096044 | Msa0103070:intron | 50.0% | |
| CTGCTGTTCGCATGATTCCA+TGG | + | chr1_3:10096148-10096167 | Msa0103070:CDS | 50.0% | |
| TCGCATGATTCCATGGGCAA+AGG | + | chr1_3:10096155-10096174 | Msa0103070:CDS | 50.0% | |
| TTGAGGTTTGCCTTTGCCCA+TGG | - | chr1_3:10096168-10096187 | None:intergenic | 50.0% | |
| GTGCCTGAGCGGTATAATTG+AGG | - | chr1_3:10096185-10096204 | None:intergenic | 50.0% | |
| ! | TCTGAGACACCATCGTGACA+CGG | + | chr1_3:10096832-10096851 | Msa0103070:CDS | 50.0% |
| ! | GAAGCTGCTTTACTCGTTGC+TGG | + | chr1_3:10096865-10096884 | Msa0103070:exon | 50.0% |
| ! | GCTTTACTCGTTGCTGGTCT+TGG | + | chr1_3:10096871-10096890 | Msa0103070:three_prime_UTR | 50.0% |
| CCCAGAAAGCAAAGTCGTAC+AGG | - | chr1_3:10096926-10096945 | None:intergenic | 50.0% | |
| !! | ATGGATTGGCTCGCTGGTGT+AGG | - | chr1_3:10094614-10094633 | None:intergenic | 55.0% |
| !! | AACCACATGGATTGGCTCGC+TGG | - | chr1_3:10094620-10094639 | None:intergenic | 55.0% |
| !! | CACAAGTGTCGGTGTCGTGT+TGG | - | chr1_3:10095041-10095060 | None:intergenic | 55.0% |
| CAACACGACACCGACACTTG+TGG | + | chr1_3:10095039-10095058 | Msa0103070:intron | 55.0% | |
| ! | TATGCAGAAGGTGTGCGTGC+TGG | + | chr1_3:10095314-10095333 | Msa0103070:intron | 55.0% |
| AGGTGTGCGTGCTGGATTCA+AGG | + | chr1_3:10095322-10095341 | Msa0103070:CDS | 55.0% | |
| ACTGACAACGCATGCAACGG+CGG | - | chr1_3:10095351-10095370 | None:intergenic | 55.0% | |
| TGCTTTCTGGGTCTGTCTCG+TGG | + | chr1_3:10096935-10096954 | Msa0103070:three_prime_UTR | 55.0% | |
| CACCAGCGAGCCAATCCATG+TGG | + | chr1_3:10094615-10094634 | Msa0103070:intron | 60.0% | |
| !! | GTCGGTGTCGTGTTGGACAC+CGG | - | chr1_3:10095034-10095053 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 10093906 | 10097174 | 10093906 | ID=Msa0103070;Name=Msa0103070 |
| chr1_3 | mRNA | 10093906 | 10097174 | 10093906 | ID=Msa0103070-mRNA-1;Parent=Msa0103070;Name=Msa0103070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=260|1|1|1|1|1|4|309|120 |
| chr1_3 | exon | 10093906 | 10094277 | 10093906 | ID=Msa0103070-mRNA-1:exon:4141;Parent=Msa0103070-mRNA-1 |
| chr1_3 | exon | 10095321 | 10095382 | 10095321 | ID=Msa0103070-mRNA-1:exon:4142;Parent=Msa0103070-mRNA-1 |
| chr1_3 | exon | 10096144 | 10096219 | 10096144 | ID=Msa0103070-mRNA-1:exon:4143;Parent=Msa0103070-mRNA-1 |
| chr1_3 | exon | 10096753 | 10097174 | 10096753 | ID=Msa0103070-mRNA-1:exon:4144;Parent=Msa0103070-mRNA-1 |
| chr1_3 | five_prime_UTR | 10093906 | 10094165 | 10093906 | ID=Msa0103070-mRNA-1:five_prime_utr;Parent=Msa0103070-mRNA-1 |
| chr1_3 | CDS | 10094166 | 10094277 | 10094166 | ID=Msa0103070-mRNA-1:cds;Parent=Msa0103070-mRNA-1 |
| chr1_3 | CDS | 10095321 | 10095382 | 10095321 | ID=Msa0103070-mRNA-1:cds;Parent=Msa0103070-mRNA-1 |
| chr1_3 | CDS | 10096144 | 10096219 | 10096144 | ID=Msa0103070-mRNA-1:cds;Parent=Msa0103070-mRNA-1 |
| chr1_3 | CDS | 10096753 | 10096865 | 10096753 | ID=Msa0103070-mRNA-1:cds;Parent=Msa0103070-mRNA-1 |
| chr1_3 | three_prime_UTR | 10096866 | 10097174 | 10096866 | ID=Msa0103070-mRNA-1:three_prime_utr;Parent=Msa0103070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
