Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057750 | XP_003588448.1 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 1.14e-81 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057750 | sp|Q02921|NO93_SOYBN | 65.000 | 80 | 28 | 0 | 26 | 105 | 17 | 96 | 3.04e-23 | 89.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057750 | G7I281 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 5.43e-82 | 245 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0057750 | 0.814163 | 1.771767e-51 | -8.615850e-47 |
| Msa0008840 | Msa0057750 | 0.980427 | 3.412378e-150 | -8.615850e-47 |
| Msa0014830 | Msa0057750 | 0.808077 | 3.698008e-50 | -8.615850e-47 |
| Msa0017320 | Msa0057750 | 0.804919 | 1.713937e-49 | -8.615850e-47 |
| Msa0020390 | Msa0057750 | 0.847360 | 1.214865e-59 | -8.615850e-47 |
| Msa0026660 | Msa0057750 | 0.802506 | 5.431772e-49 | -8.615850e-47 |
| Msa0030300 | Msa0057750 | 0.810089 | 1.370607e-50 | -8.615850e-47 |
| Msa0033880 | Msa0057750 | 0.837483 | 5.061395e-57 | -8.615850e-47 |
| Msa0038870 | Msa0057750 | 0.817851 | 2.660705e-52 | -8.615850e-47 |
| Msa0047250 | Msa0057750 | 0.813755 | 2.179923e-51 | -8.615850e-47 |
| Msa0055100 | Msa0057750 | 0.823995 | 1.025770e-53 | -8.615850e-47 |
| Msa0055150 | Msa0057750 | 0.837641 | 4.610408e-57 | -8.615850e-47 |
| Msa0057750 | Msa0061970 | 0.816582 | 5.133205e-52 | -8.615850e-47 |
| Msa0057750 | Msa0065010 | 0.822333 | 2.505245e-53 | -8.615850e-47 |
| Msa0057750 | Msa0068020 | 0.807357 | 5.257248e-50 | -8.615850e-47 |
| Msa0057750 | Msa0074750 | 0.823936 | 1.058735e-53 | -8.615850e-47 |
| Msa0057750 | Msa0077540 | 0.802384 | 5.755928e-49 | -8.615850e-47 |
| Msa0057750 | Msa0077900 | 0.813052 | 3.111884e-51 | -8.615850e-47 |
| Msa0057750 | Msa0081650 | 0.802343 | 5.868755e-49 | -8.615850e-47 |
| Msa0057750 | Msa0084430 | 0.801555 | 8.519577e-49 | -8.615850e-47 |
| Msa0057750 | Msa0090550 | 0.808448 | 3.081607e-50 | -8.615850e-47 |
| Msa0057750 | Msa0092170 | 0.811504 | 6.772112e-51 | -8.615850e-47 |
| Msa0057750 | Msa0093010 | 0.815380 | 9.525194e-52 | -8.615850e-47 |
| Msa0057750 | Msa0095360 | 0.803047 | 4.200137e-49 | -8.615850e-47 |
| Msa0057750 | Msa0100800 | 0.824935 | 6.162822e-54 | -8.615850e-47 |
| Msa0057750 | Msa0101180 | 0.847861 | 8.845486e-60 | -8.615850e-47 |
| Msa0057750 | Msa0103070 | 0.998167 | 8.459468e-258 | -8.615850e-47 |
| Msa0057750 | Msa0103790 | 0.841938 | 3.507618e-58 | -8.615850e-47 |
| Msa0057750 | Msa0111080 | 0.807494 | 4.918751e-50 | -8.615850e-47 |
| Msa0057750 | Msa0115370 | 0.835248 | 1.873879e-56 | -8.615850e-47 |
| Msa0057750 | Msa0118540 | 0.813010 | 3.177874e-51 | -8.615850e-47 |
| Msa0057750 | Msa0121820 | 0.825977 | 3.491618e-54 | -8.615850e-47 |
| Msa0057750 | Msa0126880 | 0.843850 | 1.087463e-58 | -8.615850e-47 |
| Msa0057750 | Msa0127040 | 0.801381 | 9.247679e-49 | -8.615850e-47 |
| Msa0057750 | Msa0127850 | 0.827812 | 1.271966e-54 | -8.615850e-47 |
| Msa0057750 | Msa0131450 | 0.822103 | 2.832830e-53 | -8.615850e-47 |
| Msa0057750 | Msa0142500 | 0.838284 | 3.150124e-57 | -8.615850e-47 |
| Msa0057750 | Msa0145150 | 0.813569 | 2.395135e-51 | -8.615850e-47 |
| Msa0057750 | Msa0146080 | 0.835350 | 1.766598e-56 | -8.615850e-47 |
| Msa0057750 | Msa0150260 | 0.848610 | 5.491169e-60 | -8.615850e-47 |
| Msa0057750 | Msa0154920 | 0.816622 | 5.029203e-52 | -8.615850e-47 |
| Msa0057750 | Msa0166750 | 0.844702 | 6.417703e-59 | -8.615850e-47 |
| Msa0057750 | Msa0167980 | 0.811050 | 8.499906e-51 | -8.615850e-47 |
| Msa0057750 | Msa0171980 | 0.821278 | 4.395139e-53 | -8.615850e-47 |
| Msa0057750 | Msa0174000 | 0.838597 | 2.616288e-57 | -8.615850e-47 |
| Msa0057750 | Msa0175200 | 0.810571 | 1.078876e-50 | -8.615850e-47 |
| Msa0057750 | Msa0175290 | -0.804798 | 1.816818e-49 | -8.615850e-47 |
| Msa0057750 | Msa0176330 | 0.832659 | 8.330601e-56 | -8.615850e-47 |
| Msa0057750 | Msa0183460 | 0.806271 | 8.922077e-50 | -8.615850e-47 |
| Msa0057750 | Msa0183870 | 0.857568 | 1.493543e-62 | -8.615850e-47 |
| Msa0057750 | Msa0187490 | 0.821585 | 3.734001e-53 | -8.615850e-47 |
| Msa0057750 | Msa0190120 | 0.807460 | 5.001765e-50 | -8.615850e-47 |
| Msa0057750 | Msa0191080 | 0.808358 | 3.220471e-50 | -8.615850e-47 |
| Msa0057750 | Msa0193600 | 0.831755 | 1.394422e-55 | -8.615850e-47 |
| Msa0057750 | Msa0202930 | 0.831196 | 1.914576e-55 | -8.615850e-47 |
| Msa0057750 | Msa0209080 | 0.815642 | 8.328463e-52 | -8.615850e-47 |
| Msa0057750 | Msa0229360 | 0.806764 | 7.019512e-50 | -8.615850e-47 |
| Msa0057750 | Msa0233370 | 0.807817 | 4.199181e-50 | -8.615850e-47 |
| Msa0057750 | Msa0241740 | 0.824108 | 9.648228e-54 | -8.615850e-47 |
| Msa0057750 | Msa0257490 | 0.821610 | 3.684286e-53 | -8.615850e-47 |
| Msa0057750 | Msa0265160 | 0.804762 | 1.848451e-49 | -8.615850e-47 |
| Msa0057750 | Msa0265600 | 0.800575 | 1.351268e-48 | -8.615850e-47 |
| Msa0057750 | Msa0269470 | 0.830098 | 3.555077e-55 | -8.615850e-47 |
| Msa0057750 | Msa0273650 | 0.827693 | 1.358554e-54 | -8.615850e-47 |
| Msa0057750 | Msa0280430 | 0.802058 | 6.716088e-49 | -8.615850e-47 |
| Msa0057750 | Msa0284450 | 0.806225 | 9.123242e-50 | -8.615850e-47 |
| Msa0057750 | Msa0291520 | 0.812561 | 3.985138e-51 | -8.615850e-47 |
| Msa0057750 | Msa0296790 | 0.823531 | 1.317125e-53 | -8.615850e-47 |
| Msa0057750 | Msa0296920 | 0.827645 | 1.394992e-54 | -8.615850e-47 |
| Msa0057750 | Msa0304590 | 0.800740 | 1.250516e-48 | -8.615850e-47 |
| Msa0057750 | Msa0304660 | 0.821046 | 4.971943e-53 | -8.615850e-47 |
| Msa0057750 | Msa0331700 | 0.818234 | 2.179948e-52 | -8.615850e-47 |
| Msa0057750 | Msa0365860 | 0.815572 | 8.631626e-52 | -8.615850e-47 |
| Msa0057750 | Msa0370160 | -0.811756 | 5.972100e-51 | -8.615850e-47 |
| Msa0057750 | Msa0379570 | 0.832838 | 7.520951e-56 | -8.615850e-47 |
| Msa0057750 | Msa0382370 | 0.807254 | 5.530710e-50 | -8.615850e-47 |
| Msa0057750 | Msa0384670 | 0.820614 | 6.250004e-53 | -8.615850e-47 |
| Msa0057750 | Msa0384880 | 0.839817 | 1.262912e-57 | -8.615850e-47 |
| Msa0057750 | Msa0385490 | 0.821018 | 5.047214e-53 | -8.615850e-47 |
| Msa0057750 | Msa0387880 | -0.807432 | 5.068357e-50 | -8.615850e-47 |
| Msa0057750 | Msa0389510 | 0.822674 | 2.087234e-53 | -8.615850e-47 |
| Msa0057750 | Msa0403770 | 0.812618 | 3.871785e-51 | -8.615850e-47 |
| Msa0057750 | Msa0408390 | 0.810028 | 1.412770e-50 | -8.615850e-47 |
| Msa0057750 | Msa0434570 | 0.806263 | 8.954842e-50 | -8.615850e-47 |
| Msa0057750 | Msa0434770 | 0.815279 | 1.002942e-51 | -8.615850e-47 |
| Msa0057750 | Msa0436190 | 0.806002 | 1.016101e-49 | -8.615850e-47 |
| Msa0057750 | Msa0436200 | 0.814335 | 1.623639e-51 | -8.615850e-47 |
| Msa0057750 | Msa0439890 | 0.831185 | 1.926209e-55 | -8.615850e-47 |
| Msa0057750 | Msa0443430 | 0.819804 | 9.581091e-53 | -8.615850e-47 |
| Msa0057750 | Msa0478580 | 0.810662 | 1.031140e-50 | -8.615850e-47 |
| Msa0057750 | Msa0479330 | 0.801810 | 7.554793e-49 | -8.615850e-47 |
| Msa0057750 | Msa0482940 | 0.801657 | 8.118902e-49 | -8.615850e-47 |
| Msa0057750 | Msa0484740 | 0.809423 | 1.906236e-50 | -8.615850e-47 |
| Msa0057750 | Msa0485850 | 0.803021 | 4.252083e-49 | -8.615850e-47 |
| Msa0057750 | Msa0489660 | 0.800347 | 1.504053e-48 | -8.615850e-47 |
| Msa0057750 | Msa0511770 | 0.800163 | 1.639779e-48 | -8.615850e-47 |
| Msa0057750 | Msa0524590 | 0.803234 | 3.842111e-49 | -8.615850e-47 |
| Msa0057750 | Msa0527910 | 0.811716 | 6.091986e-51 | -8.615850e-47 |
| Msa0057750 | Msa0534410 | 0.818485 | 1.912205e-52 | -8.615850e-47 |
| Msa0057750 | Msa0534900 | 0.800489 | 1.407453e-48 | -8.615850e-47 |
| Msa0057750 | Msa0546570 | 0.805516 | 1.285825e-49 | -8.615850e-47 |
| Msa0057750 | Msa0547990 | 0.830416 | 2.972863e-55 | -8.615850e-47 |
| Msa0057750 | Msa0556790 | 0.814300 | 1.652506e-51 | -8.615850e-47 |
| Msa0057750 | Msa0580230 | 0.817956 | 2.519918e-52 | -8.615850e-47 |
| Msa0057750 | Msa0583500 | 0.802124 | 6.509070e-49 | -8.615850e-47 |
| Msa0057750 | Msa0590650 | 0.811342 | 7.344405e-51 | -8.615850e-47 |
| Msa0057750 | Msa0600450 | 0.805866 | 1.085267e-49 | -8.615850e-47 |
| Msa0057750 | Msa0602370 | 0.804992 | 1.655418e-49 | -8.615850e-47 |
| Msa0057750 | Msa0603570 | 0.817963 | 2.510031e-52 | -8.615850e-47 |
| Msa0057750 | Msa0609220 | 0.822419 | 2.393358e-53 | -8.615850e-47 |
| Msa0057750 | Msa0610390 | 0.802507 | 5.428506e-49 | -8.615850e-47 |
| Msa0057750 | Msa0615680 | 0.819776 | 9.723496e-53 | -8.615850e-47 |
| Msa0057750 | Msa0617260 | 0.808742 | 2.667484e-50 | -8.615850e-47 |
| Msa0057750 | Msa0618930 | 0.806390 | 8.417776e-50 | -8.615850e-47 |
| Msa0057750 | Msa0620330 | 0.811967 | 5.371011e-51 | -8.615850e-47 |
| Msa0057750 | Msa0621650 | 0.806508 | 7.950908e-50 | -8.615850e-47 |
| Msa0057750 | Msa0626940 | 0.810427 | 1.158727e-50 | -8.615850e-47 |
| Msa0057750 | Msa0630950 | 0.804378 | 2.222988e-49 | -8.615850e-47 |
| Msa0057750 | Msa0631350 | 0.801743 | 7.797870e-49 | -8.615850e-47 |
| Msa0057750 | Msa0640940 | 0.808501 | 3.002539e-50 | -8.615850e-47 |
| Msa0057750 | Msa0643320 | 0.802828 | 4.661746e-49 | -8.615850e-47 |
| Msa0057750 | Msa0644030 | 0.808261 | 3.379067e-50 | -8.615850e-47 |
| Msa0057750 | Msa0652300 | 0.802807 | 4.708037e-49 | -8.615850e-47 |
| Msa0057750 | Msa0661090 | 0.820329 | 7.266860e-53 | -8.615850e-47 |
| Msa0057750 | Msa0662630 | 0.832304 | 1.020302e-55 | -8.615850e-47 |
| Msa0057750 | Msa0668460 | -0.802061 | 6.706084e-49 | -8.615850e-47 |
| Msa0057750 | Msa0669190 | 0.803551 | 3.303380e-49 | -8.615850e-47 |
| Msa0057750 | Msa0669720 | 0.831871 | 1.305169e-55 | -8.615850e-47 |
| Msa0057750 | Msa0669760 | 0.804224 | 2.393419e-49 | -8.615850e-47 |
| Msa0057750 | Msa0672480 | 0.811006 | 8.685481e-51 | -8.615850e-47 |
| Msa0057750 | Msa0679360 | 0.801734 | 7.829501e-49 | -8.615850e-47 |
| Msa0057750 | Msa0693790 | 0.812269 | 4.616113e-51 | -8.615850e-47 |
| Msa0057750 | Msa0694840 | 0.804171 | 2.455172e-49 | -8.615850e-47 |
| Msa0057750 | Msa0705390 | 0.805519 | 1.283480e-49 | -8.615850e-47 |
| Msa0057750 | Msa0705600 | 0.802021 | 6.836059e-49 | -8.615850e-47 |
| Msa0057750 | Msa0705990 | 0.807532 | 4.828701e-50 | -8.615850e-47 |
| Msa0057750 | Msa0726080 | 0.807628 | 4.605783e-50 | -8.615850e-47 |
| Msa0057750 | Msa0743530 | 0.842399 | 2.648541e-58 | -8.615850e-47 |
| Msa0057750 | Msa0746170 | 0.801723 | 7.871550e-49 | -8.615850e-47 |
| Msa0057750 | Msa0746210 | 0.800835 | 1.196213e-48 | -8.615850e-47 |
| Msa0057750 | Msa0766670 | 0.828084 | 1.094134e-54 | -8.615850e-47 |
| Msa0057750 | Msa0792780 | 0.800267 | 1.561752e-48 | -8.615850e-47 |
| Msa0057750 | Msa0794050 | 0.807568 | 4.743933e-50 | -8.615850e-47 |
| Msa0057750 | Msa0800370 | 0.815885 | 7.351529e-52 | -8.615850e-47 |
| Msa0057750 | Msa0822170 | 0.838513 | 2.749842e-57 | -8.615850e-47 |
| Msa0057750 | Msa0822180 | 0.805355 | 1.389464e-49 | -8.615850e-47 |
| Msa0057750 | Msa0833190 | -0.802575 | 5.256054e-49 | -8.615850e-47 |
| Msa0057750 | Msa0846230 | 0.807088 | 5.995918e-50 | -8.615850e-47 |
| Msa0057750 | Msa0846400 | 0.809803 | 1.579253e-50 | -8.615850e-47 |
| Msa0057750 | Msa0861470 | 0.821363 | 4.201075e-53 | -8.615850e-47 |
| Msa0057750 | Msa0861570 | 0.824041 | 1.000607e-53 | -8.615850e-47 |
| Msa0057750 | Msa0866400 | 0.807855 | 4.121651e-50 | -8.615850e-47 |
| Msa0057750 | Msa0879850 | 0.807143 | 5.837902e-50 | -8.615850e-47 |
| Msa0057750 | Msa0879860 | 0.801384 | 9.236700e-49 | -8.615850e-47 |
| Msa0057750 | Msa0882730 | 0.801705 | 7.937403e-49 | -8.615850e-47 |
| Msa0057750 | Msa0903780 | 0.810671 | 1.026302e-50 | -8.615850e-47 |
| Msa0057750 | Msa0924150 | -0.815577 | 8.607368e-52 | -8.615850e-47 |
| Msa0057750 | Msa0928120 | 0.841375 | 4.937299e-58 | -8.615850e-47 |
| Msa0057750 | Msa0937330 | 0.805892 | 1.071985e-49 | -8.615850e-47 |
| Msa0057750 | Msa0943270 | 0.825892 | 3.658917e-54 | -8.615850e-47 |
| Msa0057750 | Msa0944200 | 0.812682 | 3.749703e-51 | -8.615850e-47 |
| Msa0057750 | Msa0944610 | 0.826306 | 2.915713e-54 | -8.615850e-47 |
| Msa0057750 | Msa0947800 | 0.823582 | 1.281860e-53 | -8.615850e-47 |
| Msa0057750 | Msa0974950 | 0.802464 | 5.541631e-49 | -8.615850e-47 |
| Msa0057750 | Msa0980020 | 0.809121 | 2.213031e-50 | -8.615850e-47 |
| Msa0057750 | Msa0994370 | 0.804128 | 2.506953e-49 | -8.615850e-47 |
| Msa0057750 | Msa1010460 | 0.807359 | 5.254016e-50 | -8.615850e-47 |
| Msa0057750 | Msa1025940 | 0.807176 | 5.744234e-50 | -8.615850e-47 |
| Msa0057750 | Msa1029970 | 0.801764 | 7.720751e-49 | -8.615850e-47 |
| Msa0057750 | Msa1033520 | 0.804991 | 1.655920e-49 | -8.615850e-47 |
| Msa0057750 | Msa1033970 | 0.801638 | 8.194222e-49 | -8.615850e-47 |
| Msa0057750 | Msa1034270 | 0.800270 | 1.559109e-48 | -8.615850e-47 |
| Msa0057750 | Msa1037520 | 0.804649 | 1.951963e-49 | -8.615850e-47 |
| Msa0057750 | Msa1042660 | 0.821132 | 4.749547e-53 | -8.615850e-47 |
| Msa0057750 | Msa1070050 | 0.805036 | 1.620576e-49 | -8.615850e-47 |
| Msa0057750 | Msa1070390 | 0.812417 | 4.285102e-51 | -8.615850e-47 |
| Msa0057750 | Msa1071320 | 0.822550 | 2.231358e-53 | -8.615850e-47 |
| Msa0057750 | Msa1071660 | 0.805518 | 1.284413e-49 | -8.615850e-47 |
| Msa0057750 | Msa1072900 | 0.825313 | 5.018055e-54 | -8.615850e-47 |
| Msa0057750 | Msa1073400 | 0.815634 | 8.360806e-52 | -8.615850e-47 |
| Msa0057750 | Msa1073830 | 0.827608 | 1.424440e-54 | -8.615850e-47 |
| Msa0057750 | Msa1084500 | -0.801818 | 7.523370e-49 | -8.615850e-47 |
| Msa0057750 | Msa1089740 | -0.801127 | 1.042559e-48 | -8.615850e-47 |
| Msa0057750 | Msa1100530 | -0.827824 | 1.263569e-54 | -8.615850e-47 |
| Msa0057750 | Msa1103660 | -0.801351 | 9.383221e-49 | -8.615850e-47 |
| Msa0057750 | Msa1113590 | 0.803709 | 3.062506e-49 | -8.615850e-47 |
| Msa0057750 | Msa1113880 | 0.817839 | 2.677307e-52 | -8.615850e-47 |
| Msa0057750 | Msa1114040 | 0.802109 | 6.556730e-49 | -8.615850e-47 |
| Msa0057750 | Msa1120810 | 0.811470 | 6.891051e-51 | -8.615850e-47 |
| Msa0057750 | Msa1125790 | -0.815266 | 1.009427e-51 | -8.615850e-47 |
| Msa0057750 | Msa1131490 | 0.802084 | 6.634489e-49 | -8.615850e-47 |
| Msa0057750 | Msa1133250 | 0.814444 | 1.535556e-51 | -8.615850e-47 |
| Msa0057750 | Msa1135810 | -0.810773 | 9.758978e-51 | -8.615850e-47 |
| Msa0057750 | Msa1154490 | 0.809420 | 1.909204e-50 | -8.615850e-47 |
| Msa0057750 | Msa1158770 | 0.815649 | 8.295824e-52 | -8.615850e-47 |
| Msa0057750 | Msa1160360 | 0.809551 | 1.788945e-50 | -8.615850e-47 |
| Msa0057750 | Msa1163870 | 0.810409 | 1.169660e-50 | -8.615850e-47 |
| Msa0057750 | Msa1164020 | 0.811506 | 6.768419e-51 | -8.615850e-47 |
| Msa0057750 | Msa1165780 | 0.800329 | 1.516716e-48 | -8.615850e-47 |
| Msa0057750 | Msa1176360 | 0.806749 | 7.070437e-50 | -8.615850e-47 |
| Msa0057750 | Msa1197070 | 0.800570 | 1.354701e-48 | -8.615850e-47 |
| Msa0057750 | Msa1199290 | 0.815497 | 8.968972e-52 | -8.615850e-47 |
| Msa0057750 | Msa1200320 | 0.802730 | 4.883153e-49 | -8.615850e-47 |
| Msa0057750 | Msa1201830 | 0.813079 | 3.069077e-51 | -8.615850e-47 |
| Msa0057750 | Msa1203900 | 0.804700 | 1.904692e-49 | -8.615850e-47 |
| Msa0057750 | Msa1205480 | 0.824202 | 9.170902e-54 | -8.615850e-47 |
| Msa0057750 | Msa1205590 | 0.812064 | 5.115883e-51 | -8.615850e-47 |
| Msa0057750 | Msa1206650 | 0.852843 | 3.536790e-61 | -8.615850e-47 |
| Msa0057750 | Msa1207730 | 0.816209 | 6.221553e-52 | -8.615850e-47 |
| Msa0057750 | Msa1211830 | 0.809801 | 1.580756e-50 | -8.615850e-47 |
| Msa0057750 | Msa1214320 | 0.815429 | 9.288551e-52 | -8.615850e-47 |
| Msa0057750 | Msa1226610 | 0.804888 | 1.740113e-49 | -8.615850e-47 |
| Msa0057750 | Msa1250110 | 0.825335 | 4.959392e-54 | -8.615850e-47 |
| Msa0057750 | Msa1250730 | 0.816449 | 5.498576e-52 | -8.615850e-47 |
| Msa0057750 | Msa1253810 | 0.833650 | 4.721998e-56 | -8.615850e-47 |
| Msa0057750 | Msa1270660 | 0.804103 | 2.536563e-49 | -8.615850e-47 |
| Msa0057750 | Msa1297530 | 0.811048 | 8.505249e-51 | -8.615850e-47 |
| Msa0057750 | Msa1307180 | 0.812548 | 4.010486e-51 | -8.615850e-47 |
| Msa0057750 | Msa1310690 | 0.812833 | 3.474657e-51 | -8.615850e-47 |
| Msa0057750 | Msa1316360 | 0.805487 | 1.303938e-49 | -8.615850e-47 |
| Msa0057750 | Msa1331280 | 0.827852 | 1.244647e-54 | -8.615850e-47 |
| Msa0057750 | Msa1331350 | 0.800990 | 1.112155e-48 | -8.615850e-47 |
| Msa0057750 | Msa1336560 | 0.817378 | 3.401130e-52 | -8.615850e-47 |
| Msa0057750 | Msa1340830 | 0.817436 | 3.300485e-52 | -8.615850e-47 |
| Msa0057750 | Msa1359270 | 0.816530 | 5.274203e-52 | -8.615850e-47 |
| Msa0057750 | Msa1362420 | 0.810055 | 1.393923e-50 | -8.615850e-47 |
| Msa0057750 | Msa1365860 | 0.824523 | 7.709699e-54 | -8.615850e-47 |
| Msa0057750 | Msa1370590 | 0.803735 | 3.024545e-49 | -8.615850e-47 |
| Msa0057750 | Msa1381650 | 0.813996 | 1.928797e-51 | -8.615850e-47 |
| Msa0057750 | Msa1382790 | 0.804843 | 1.778162e-49 | -8.615850e-47 |
| Msa0057750 | Msa1384100 | 0.801034 | 1.088999e-48 | -8.615850e-47 |
| Msa0057750 | Msa1385350 | 0.808705 | 2.715768e-50 | -8.615850e-47 |
| Msa0057750 | Msa1396940 | 0.813552 | 2.416176e-51 | -8.615850e-47 |
| Msa0057750 | Msa1411950 | 0.808133 | 3.596658e-50 | -8.615850e-47 |
| Msa0057750 | Msa1416260 | 0.830142 | 3.468103e-55 | -8.615850e-47 |
| Msa0057750 | Msa1418960 | -0.803015 | 4.264849e-49 | -8.615850e-47 |
| Msa0057750 | Msa1422810 | 0.802349 | 5.851221e-49 | -8.615850e-47 |
| Msa0057750 | Msa1444120 | 0.809287 | 2.038712e-50 | -8.615850e-47 |
| Msa0057750 | Msa1447890 | 0.831870 | 1.306046e-55 | -8.615850e-47 |
| Msa0057750 | Msa1454450 | 0.812731 | 3.658753e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057750 | MtrunA17_Chr1g0146471 | 99.167 | 120 | 1 | 0 | 1 | 120 | 1 | 120 | 1.05e-85 | 245 |
| Msa0057750 | MtrunA17_Chr3g0140601 | 68.376 | 117 | 35 | 2 | 1 | 115 | 1 | 117 | 2.53e-54 | 166 |
| Msa0057750 | MtrunA17_Chr4g0063331 | 58.750 | 80 | 33 | 0 | 26 | 105 | 21 | 100 | 8.31e-25 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0057750 | AT5G25940.1 | 68.041 | 97 | 29 | 1 | 14 | 108 | 12 | 108 | 3.74e-29 | 102 |
Find 48 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGTACGACTTTGCTTTC+TGG | 0.091728 | 1_2:+13971447 | Msa0057750:three_prime_UTR |
| CATCTCAACTTTGGTGTTCT+TGG | 0.192946 | 1_2:+13971653 | Msa0057750:three_prime_UTR |
| TGTTGTGTAACAGTTATATT+TGG | 0.201564 | 1_2:+13971522 | Msa0057750:three_prime_UTR |
| CCTGTACGACTTTGCTTTCT+GGG | 0.225724 | 1_2:+13971448 | Msa0057750:three_prime_UTR |
| GGAGAAAACAAAATTGAATT+TGG | 0.233532 | 1_2:-13968545 | None:intergenic |
| AATAATAAATGAATTTCTTT+TGG | 0.261264 | 1_2:-13968712 | None:intergenic |
| TGGAATTGCGGTGACGATAT+TGG | 0.338526 | 1_2:-13968440 | None:intergenic |
| TGCGGTGACGATATTGGTTT+GGG | 0.339692 | 1_2:-13968434 | None:intergenic |
| GAAGCTGCTTTACTCGTTGC+TGG | 0.345829 | 1_2:+13971390 | Msa0057750:exon |
| TTGCGGTGACGATATTGGTT+TGG | 0.346040 | 1_2:-13968435 | None:intergenic |
| GCTTTACTCGTTGCTGGTCT+TGG | 0.353662 | 1_2:+13971396 | Msa0057750:three_prime_UTR |
| GTAAGTAGCGGGTAATATAA+TGG | 0.366704 | 1_2:-13968601 | None:intergenic |
| CACTGCTGATAAAACTATCT+TGG | 0.370507 | 1_2:+13971300 | Msa0057750:CDS |
| AAAGCCACTCCACTAATTAC+TGG | 0.374663 | 1_2:-13971555 | None:intergenic |
| TTCAGAACTTAGAGATGCTT+GGG | 0.386088 | 1_2:+13968686 | Msa0057750:CDS |
| CTTCAGAACTTAGAGATGCT+TGG | 0.415026 | 1_2:+13968685 | Msa0057750:CDS |
| CTCAACTTTGGTGTTCTTGG+TGG | 0.421981 | 1_2:+13971656 | Msa0057750:three_prime_UTR |
| TTTCTATCACATCTCAACTT+TGG | 0.432124 | 1_2:+13971644 | Msa0057750:three_prime_UTR |
| TAAGTAGCGGGTAATATAAT+GGG | 0.441398 | 1_2:-13968600 | None:intergenic |
| CTGCTGTTCGCATGATTCCA+TGG | 0.443299 | 1_2:+13970673 | Msa0057750:CDS |
| AAAATCTTCCTCTCTTCATC+AGG | 0.443350 | 1_2:-13968741 | None:intergenic |
| GTGATAGAAAATTAAACAAA+TGG | 0.469427 | 1_2:-13971631 | None:intergenic |
| AGGTGTGCGTGCTGGATTCA+AGG | 0.476456 | 1_2:+13969847 | Msa0057750:CDS |
| AGTGGAGTGGCTTTATAAAG+AGG | 0.480251 | 1_2:+13971564 | Msa0057750:three_prime_UTR |
| TGCTTTCTGGGTCTGTCTCG+TGG | 0.485290 | 1_2:+13971460 | Msa0057750:three_prime_UTR |
| CCCAGAAAGCAAAGTCGTAC+AGG | 0.489539 | 1_2:-13971448 | None:intergenic |
| TTGAGGTTTGCCTTTGCCCA+TGG | 0.506394 | 1_2:-13970690 | None:intergenic |
| ATTGCTACTCCAGTAATTAG+TGG | 0.516108 | 1_2:+13971546 | Msa0057750:three_prime_UTR |
| CAAGCATCTCTAAGTTCTGA+AGG | 0.519720 | 1_2:-13968684 | None:intergenic |
| GTGCCTGAGCGGTATAATTG+AGG | 0.519973 | 1_2:-13970707 | None:intergenic |
| GAATGATTGAAGGTATCAAT+CGG | 0.523943 | 1_2:-13968513 | None:intergenic |
| AAGCTTTATTCGTAAGTAGC+GGG | 0.528498 | 1_2:-13968612 | None:intergenic |
| GTGTGAAAATGAATGATTGA+AGG | 0.529823 | 1_2:-13968523 | None:intergenic |
| TATGCAGAAGGTGTGCGTGC+TGG | 0.548386 | 1_2:+13969839 | Msa0057750:intron |
| TGCTGTTCGCATGATTCCAT+GGG | 0.558562 | 1_2:+13970674 | Msa0057750:CDS |
| CAGGCACTTATCATATCTGC+TGG | 0.561453 | 1_2:+13970723 | Msa0057750:CDS |
| AAACCTCAATTATACCGCTC+AGG | 0.563012 | 1_2:+13970704 | Msa0057750:CDS |
| TACTCCAGTAATTAGTGGAG+TGG | 0.607183 | 1_2:+13971551 | Msa0057750:three_prime_UTR |
| TTGCTTCTCCTGATGAAGAG+AGG | 0.611181 | 1_2:+13968733 | Msa0057750:CDS |
| TCGCATGATTCCATGGGCAA+AGG | 0.613193 | 1_2:+13970680 | Msa0057750:CDS |
| TTTCTATTAGCCGACAACGA+TGG | 0.623542 | 1_2:-13968566 | None:intergenic |
| GAAGCTTTATTCGTAAGTAG+CGG | 0.628755 | 1_2:-13968613 | None:intergenic |
| AGTACTGACAACGCATGCAA+CGG | 0.637303 | 1_2:-13969876 | None:intergenic |
| TCTGAGACACCATCGTGACA+CGG | 0.644860 | 1_2:+13971357 | Msa0057750:CDS |
| ACTGACAACGCATGCAACGG+CGG | 0.656885 | 1_2:-13969873 | None:intergenic |
| TGATTGAAGGTATCAATCGG+TGG | 0.672127 | 1_2:-13968510 | None:intergenic |
| AGATATGATAAGTGCCTGAG+CGG | 0.693268 | 1_2:-13970718 | None:intergenic |
| AAGATGAAACCGTGTCACGA+TGG | 0.695013 | 1_2:-13971366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATAAATGAATTTCTTT+TGG | - | chr1_2:13968715-13968734 | None:intergenic | 10.0% |
| !!! | TTAAAATGTTATTTATTATG+TGG | + | chr1_2:13968856-13968875 | Msa0057750:intron | 10.0% |
| !!! | TAAAATGTTATTTATTATGT+GGG | + | chr1_2:13968857-13968876 | Msa0057750:intron | 10.0% |
| !!! | TTTAATTTTATTTGATGTTA+AGG | + | chr1_2:13970630-13970649 | Msa0057750:intron | 10.0% |
| !! | AATATAAATTAAAGTACAAA+AGG | - | chr1_2:13971137-13971156 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAAAGAAAAAAAA+GGG | - | chr1_2:13971180-13971199 | None:intergenic | 10.0% |
| !!! | TATTTTTTGAAAGAAAAAAA+AGG | - | chr1_2:13971181-13971200 | None:intergenic | 10.0% |
| !! | ACAATAACAAAAAGAAAAAA+TGG | + | chr1_2:13968656-13968675 | Msa0057750:exon | 15.0% |
| !! | CAATAACAAAAAGAAAAAAT+GGG | + | chr1_2:13968657-13968676 | Msa0057750:exon | 15.0% |
| !!! | AATTTATTAGTTGATGATTA+TGG | + | chr1_2:13968922-13968941 | Msa0057750:intron | 15.0% |
| !! | AAATCAATGTTAAACTTTAT+TGG | + | chr1_2:13969450-13969469 | Msa0057750:intron | 15.0% |
| !! | ATTGATAAAAATGAAAATCT+AGG | - | chr1_2:13969706-13969725 | None:intergenic | 15.0% |
| !!! | TCTTAATCATACTTTTAATT+GGG | - | chr1_2:13970520-13970539 | None:intergenic | 15.0% |
| !!! | TTCTTAATCATACTTTTAAT+TGG | - | chr1_2:13970521-13970540 | None:intergenic | 15.0% |
| !! | ATAAAATTAAAACTCATGAA+GGG | - | chr1_2:13970621-13970640 | None:intergenic | 15.0% |
| !! | AATAAAATTAAAACTCATGA+AGG | - | chr1_2:13970622-13970641 | None:intergenic | 15.0% |
| !!! | AGAAAAATAAATCTTTTGAA+TGG | + | chr1_2:13970814-13970833 | Msa0057750:intron | 15.0% |
| !!! | AGAAAGTTAAGATTTTAATT+TGG | - | chr1_2:13970992-13971011 | None:intergenic | 15.0% |
| !!! | AATACCATTAGTACATTTTT+TGG | - | chr1_2:13968772-13968791 | None:intergenic | 20.0% |
| !!! | AATTTTTTTGGTTAGGATTT+GGG | + | chr1_2:13969176-13969195 | Msa0057750:intron | 20.0% |
| !!! | ATTTTCTCAAATTATTGCTA+TGG | + | chr1_2:13969605-13969624 | Msa0057750:intron | 20.0% |
| !! | CAGAAATAAAGACAATTATT+TGG | - | chr1_2:13969680-13969699 | None:intergenic | 20.0% |
| !! | AAAGAAAAATTACTTACTGT+TGG | - | chr1_2:13969905-13969924 | None:intergenic | 20.0% |
| !!! | TTTAAGACATTGGTTTTTTA+CGG | + | chr1_2:13970109-13970128 | Msa0057750:intron | 20.0% |
| !! | TTATTGTTGAAAATAACACT+GGG | + | chr1_2:13970584-13970603 | Msa0057750:intron | 20.0% |
| !! | TAAAATTAAAACTCATGAAG+GGG | - | chr1_2:13970620-13970639 | None:intergenic | 20.0% |
| !! | GTGATAGAAAATTAAACAAA+TGG | - | chr1_2:13971634-13971653 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCGTTCAAGTT+TGG | - | chr1_2:13968478-13968497 | None:intergenic | 25.0% |
| ! | GGAGAAAACAAAATTGAATT+TGG | - | chr1_2:13968548-13968567 | None:intergenic | 25.0% |
| ! | AGAACCAAAAAATGTACTAA+TGG | + | chr1_2:13968765-13968784 | Msa0057750:CDS | 25.0% |
| ! | ACCAAAAAAATTCAGAATGT+TGG | - | chr1_2:13969168-13969187 | None:intergenic | 25.0% |
| !!! | CATTCTGAATTTTTTTGGTT+AGG | + | chr1_2:13969169-13969188 | Msa0057750:intron | 25.0% |
| !!! | GAATTTTTTTGGTTAGGATT+TGG | + | chr1_2:13969175-13969194 | Msa0057750:intron | 25.0% |
| !!! | CATTGTTTTTCTTCGAATTT+GGG | - | chr1_2:13969335-13969354 | None:intergenic | 25.0% |
| !! | TTCAAGAATTATTTTCCAAC+AGG | - | chr1_2:13969388-13969407 | None:intergenic | 25.0% |
| ! | GTTGGAAAATAATTCTTGAA+TGG | + | chr1_2:13969388-13969407 | Msa0057750:intron | 25.0% |
| !!! | TTCATTTTTATCAATAGAGC+AGG | + | chr1_2:13969711-13969730 | Msa0057750:intron | 25.0% |
| ! | TAACAATGTTAGATAACATG+TGG | - | chr1_2:13969744-13969763 | None:intergenic | 25.0% |
| ! | TTCATATTTCTCATGATATC+AGG | - | chr1_2:13969787-13969806 | None:intergenic | 25.0% |
| !! | CAGTAAGTAATTTTTCTTTC+CGG | + | chr1_2:13969906-13969925 | Msa0057750:intron | 25.0% |
| !!! | TTAAGACATTGGTTTTTTAC+GGG | + | chr1_2:13970110-13970129 | Msa0057750:intron | 25.0% |
| ! | CTTAAAAAACATGTAACAAG+AGG | - | chr1_2:13970176-13970195 | None:intergenic | 25.0% |
| !!! | TGTTACATGTTTTTTAAGAG+TGG | + | chr1_2:13970178-13970197 | Msa0057750:intron | 25.0% |
| ! | GATGTTCAATCTTATAAGAT+CGG | - | chr1_2:13970434-13970453 | None:intergenic | 25.0% |
| ! | GTTATTGTTGAAAATAACAC+TGG | + | chr1_2:13970583-13970602 | Msa0057750:intron | 25.0% |
| ! | TTTGAATGGTAATTTAAGCA+TGG | + | chr1_2:13970828-13970847 | Msa0057750:intron | 25.0% |
| !!! | ATAAGAATTTGTTAATGTGC+TGG | - | chr1_2:13970899-13970918 | None:intergenic | 25.0% |
| ! | AATTCATTGAAGTATGAATG+TGG | + | chr1_2:13970942-13970961 | Msa0057750:intron | 25.0% |
| !!! | GTTAAGATTTTAATTTGGAG+TGG | - | chr1_2:13970987-13971006 | None:intergenic | 25.0% |
| ! | TTTGAATGCATTATTTACAC+TGG | + | chr1_2:13971237-13971256 | Msa0057750:intron | 25.0% |
| ! | TGTTGTGTAACAGTTATATT+TGG | + | chr1_2:13971522-13971541 | Msa0057750:three_prime_UTR | 25.0% |
| !! | GAATGATTGAAGGTATCAAT+CGG | - | chr1_2:13968516-13968535 | None:intergenic | 30.0% |
| GTGTGAAAATGAATGATTGA+AGG | - | chr1_2:13968526-13968545 | None:intergenic | 30.0% | |
| !! | TAAGTAGCGGGTAATATAAT+GGG | - | chr1_2:13968603-13968622 | None:intergenic | 30.0% |
| !! | TAGTTGATGATTATGGTTAG+AGG | + | chr1_2:13968929-13968948 | Msa0057750:intron | 30.0% |
| !! | TTATGGTTAGAGGTATTTGT+TGG | + | chr1_2:13968939-13968958 | Msa0057750:intron | 30.0% |
| !!! | GGTTGATGATTTTTTCTGTT+CGG | + | chr1_2:13968960-13968979 | Msa0057750:intron | 30.0% |
| ! | TTAGTTGATTAGTTGGTTCT+TGG | - | chr1_2:13968994-13969013 | None:intergenic | 30.0% |
| ACCAACTAATCAACTAATCT+AGG | + | chr1_2:13968997-13969016 | Msa0057750:intron | 30.0% | |
| CCAACTAATCAACTAATCTA+GGG | + | chr1_2:13968998-13969017 | Msa0057750:intron | 30.0% | |
| !!! | GCCAACATTCTGAATTTTTT+TGG | + | chr1_2:13969164-13969183 | Msa0057750:intron | 30.0% |
| !! | CCATTGTTTTTCTTCGAATT+TGG | - | chr1_2:13969336-13969355 | None:intergenic | 30.0% |
| CCAAATTCGAAGAAAAACAA+TGG | + | chr1_2:13969333-13969352 | Msa0057750:intron | 30.0% | |
| ! | ATTTTCCAACAGGAACAAAA+GGG | - | chr1_2:13969378-13969397 | None:intergenic | 30.0% |
| ! | TATTTTCCAACAGGAACAAA+AGG | - | chr1_2:13969379-13969398 | None:intergenic | 30.0% |
| !! | TATTTTACTTTTCCGCTGTT+TGG | + | chr1_2:13969425-13969444 | Msa0057750:intron | 30.0% |
| !! | AACTTTATTGGACTAGCTTA+AGG | + | chr1_2:13969462-13969481 | Msa0057750:intron | 30.0% |
| TTGTTATGATATGCTGTCAA+AGG | + | chr1_2:13969758-13969777 | Msa0057750:intron | 30.0% | |
| TGTTATGATATGCTGTCAAA+GGG | + | chr1_2:13969759-13969778 | Msa0057750:intron | 30.0% | |
| TATCTTTATTAGCAAGTCTC+CGG | - | chr1_2:13969928-13969947 | None:intergenic | 30.0% | |
| AACAATGTTATGCAGTTTCA+TGG | + | chr1_2:13969992-13970011 | Msa0057750:intron | 30.0% | |
| CAATAAGCAGAAGAAATACA+TGG | - | chr1_2:13970044-13970063 | None:intergenic | 30.0% | |
| CATGTATTTCTTCTGCTTAT+TGG | + | chr1_2:13970042-13970061 | Msa0057750:intron | 30.0% | |
| TGTGAAATTGACCAATCATA+TGG | + | chr1_2:13970246-13970265 | Msa0057750:intron | 30.0% | |
| !! | CTTGGTCTTATTAAAGAACA+AGG | - | chr1_2:13970374-13970393 | None:intergenic | 30.0% |
| GTAAAATAGTGATAGGAACT+TGG | - | chr1_2:13970392-13970411 | None:intergenic | 30.0% | |
| TCTTATAAGATTGAACATCC+TGG | + | chr1_2:13970435-13970454 | Msa0057750:intron | 30.0% | |
| CAATGTTTGTGGATGATAAT+GGG | + | chr1_2:13970561-13970580 | Msa0057750:intron | 30.0% | |
| GAAGCAAGAAACAATAAATC+AGG | + | chr1_2:13970870-13970889 | Msa0057750:intron | 30.0% | |
| !! | AGTTTTCTTCTTTGTTGCTT+CGG | + | chr1_2:13971093-13971112 | Msa0057750:intron | 30.0% |
| ! | GCTTTATAAAGAGGATTTTG+TGG | + | chr1_2:13971573-13971592 | Msa0057750:three_prime_UTR | 30.0% |
| TTTCTATCACATCTCAACTT+TGG | + | chr1_2:13971644-13971663 | Msa0057750:three_prime_UTR | 30.0% | |
| ! | CAGCAATTTTCATGGAATTG+CGG | - | chr1_2:13968455-13968474 | None:intergenic | 35.0% |
| ! | AAGTTTGGCAGCAATTTTCA+TGG | - | chr1_2:13968463-13968482 | None:intergenic | 35.0% |
| !! | TTTGTTTTCTCCATCGTTGT+CGG | + | chr1_2:13968556-13968575 | Msa0057750:five_prime_UTR | 35.0% |
| !! | GTAAGTAGCGGGTAATATAA+TGG | - | chr1_2:13968604-13968623 | None:intergenic | 35.0% |
| !! | AAGCTTTATTCGTAAGTAGC+GGG | - | chr1_2:13968615-13968634 | None:intergenic | 35.0% |
| !! | GAAGCTTTATTCGTAAGTAG+CGG | - | chr1_2:13968616-13968635 | None:intergenic | 35.0% |
| TTCAGAACTTAGAGATGCTT+GGG | + | chr1_2:13968686-13968705 | Msa0057750:CDS | 35.0% | |
| AAAATCTTCCTCTCTTCATC+AGG | - | chr1_2:13968744-13968763 | None:intergenic | 35.0% | |
| !!! | GATTTTTTCTGTTCGGTATC+CGG | + | chr1_2:13968967-13968986 | Msa0057750:intron | 35.0% |
| ! | CCCTAGATTAGTTGATTAGT+TGG | - | chr1_2:13969001-13969020 | None:intergenic | 35.0% |
| !!! | GTATTTCATGAGCTAGCTTT+TGG | + | chr1_2:13969225-13969244 | Msa0057750:intron | 35.0% |
| !!! | GTATTTCTTGAGCTAGCTTT+TGG | + | chr1_2:13969290-13969309 | Msa0057750:intron | 35.0% |
| ! | TTTCTTCGAATTTGGGTTCT+AGG | - | chr1_2:13969328-13969347 | None:intergenic | 35.0% |
| !!! | ACATTGATTTTGCCAAACAG+CGG | - | chr1_2:13969440-13969459 | None:intergenic | 35.0% |
| ! | AAGGTAATGCATGTTTTCCA+TGG | + | chr1_2:13969481-13969500 | Msa0057750:intron | 35.0% |
| ! | AGGTAATGCATGTTTTCCAT+GGG | + | chr1_2:13969482-13969501 | Msa0057750:intron | 35.0% |
| TTGAATGTAACCACAAGTGT+CGG | - | chr1_2:13969577-13969596 | None:intergenic | 35.0% | |
| ACCTTCTGCATATCAAGAAA+AGG | - | chr1_2:13969831-13969850 | None:intergenic | 35.0% | |
| TTTCACCAATTATGCAGACA+TGG | - | chr1_2:13970071-13970090 | None:intergenic | 35.0% | |
| TTGGTGAAAGAATGTCTTTC+AGG | + | chr1_2:13970082-13970101 | Msa0057750:intron | 35.0% | |
| TGGTGAAAGAATGTCTTTCA+GGG | + | chr1_2:13970083-13970102 | Msa0057750:intron | 35.0% | |
| TTCTCTATCAAACATCACGT+TGG | - | chr1_2:13970212-13970231 | None:intergenic | 35.0% | |
| CTCTGTAGTGTTGTAATCAA+GGG | + | chr1_2:13970342-13970361 | Msa0057750:intron | 35.0% | |
| ATTGTTCTTCAACACAAACC+AGG | - | chr1_2:13970456-13970475 | None:intergenic | 35.0% | |
| ACACTAAAAGAGGTTTCAGA+AGG | - | chr1_2:13970482-13970501 | None:intergenic | 35.0% | |
| TTTAATTGGGTTTCAGAAGC+TGG | - | chr1_2:13970507-13970526 | None:intergenic | 35.0% | |
| TATCATCCACAAACATTGGA+GGG | - | chr1_2:13970559-13970578 | None:intergenic | 35.0% | |
| TTATCATCCACAAACATTGG+AGG | - | chr1_2:13970560-13970579 | None:intergenic | 35.0% | |
| CCATTATCATCCACAAACAT+TGG | - | chr1_2:13970563-13970582 | None:intergenic | 35.0% | |
| CCAATGTTTGTGGATGATAA+TGG | + | chr1_2:13970560-13970579 | Msa0057750:intron | 35.0% | |
| ! | AGGTCTTCAAATTTTGCAGT+TGG | + | chr1_2:13970650-13970669 | Msa0057750:intron | 35.0% |
| !! | GTAAGGAGCAAACCATTTTT+CGG | + | chr1_2:13971038-13971057 | Msa0057750:intron | 35.0% |
| !! | TAAGGAGCAAACCATTTTTC+GGG | + | chr1_2:13971039-13971058 | Msa0057750:intron | 35.0% |
| GCAAAAAGAGTCAAACTGAA+TGG | - | chr1_2:13971211-13971230 | None:intergenic | 35.0% | |
| ! | GCATTATTTACACTGGTTGT+TGG | + | chr1_2:13971244-13971263 | Msa0057750:intron | 35.0% |
| ! | TATTTACACTGGTTGTTGGT+TGG | + | chr1_2:13971248-13971267 | Msa0057750:intron | 35.0% |
| CACTGCTGATAAAACTATCT+TGG | + | chr1_2:13971300-13971319 | Msa0057750:CDS | 35.0% | |
| ATTGCTACTCCAGTAATTAG+TGG | + | chr1_2:13971546-13971565 | Msa0057750:three_prime_UTR | 35.0% | |
| !! | TGATTGAAGGTATCAATCGG+TGG | - | chr1_2:13968513-13968532 | None:intergenic | 40.0% |
| TTTCTATTAGCCGACAACGA+TGG | - | chr1_2:13968569-13968588 | None:intergenic | 40.0% | |
| ! | CAAGCATCTCTAAGTTCTGA+AGG | - | chr1_2:13968687-13968706 | None:intergenic | 40.0% |
| CTTCAGAACTTAGAGATGCT+TGG | + | chr1_2:13968685-13968704 | Msa0057750:CDS | 40.0% | |
| ! | TGATTAGTTGGTTCTTGGAC+CGG | - | chr1_2:13968989-13969008 | None:intergenic | 40.0% |
| TCGAATCAGCCAACTTATGT+GGG | - | chr1_2:13969061-13969080 | None:intergenic | 40.0% | |
| TTCGAATCAGCCAACTTATG+TGG | - | chr1_2:13969062-13969081 | None:intergenic | 40.0% | |
| AGCAACAAAACCACATGGAT+TGG | - | chr1_2:13969137-13969156 | None:intergenic | 40.0% | |
| GCTAGCTCATGAAATACAAG+TGG | - | chr1_2:13969222-13969241 | None:intergenic | 40.0% | |
| GCTAGCTCAAGAAATACAAG+TGG | - | chr1_2:13969287-13969306 | None:intergenic | 40.0% | |
| !!! | CTAGCTTTTGGAGTTGTGTT+AGG | + | chr1_2:13969237-13969256 | Msa0057750:intron | 40.0% |
| ! | TCATTCCCTTTTGTTCCTGT+TGG | + | chr1_2:13969370-13969389 | Msa0057750:intron | 40.0% |
| ! | ACACCTTCAATCTGAAGTGT+TGG | - | chr1_2:13969518-13969537 | None:intergenic | 40.0% |
| ATTATTGCTATGGTCGCGTA+TGG | + | chr1_2:13969615-13969634 | Msa0057750:intron | 40.0% | |
| ! | TTGCGTTGGTGCTTCATAAT+TGG | + | chr1_2:13969647-13969666 | Msa0057750:intron | 40.0% |
| CAAGAAAAGGCTAAAGCGTA+AGG | - | chr1_2:13969818-13969837 | None:intergenic | 40.0% | |
| ! | GCCTTTTCTTGATATGCAGA+AGG | + | chr1_2:13969827-13969846 | Msa0057750:intron | 40.0% |
| !! | TTCAGGGCTCTTTAAGACAT+TGG | + | chr1_2:13970099-13970118 | Msa0057750:intron | 40.0% |
| ! | TGCAATTTTACACCACCAAC+AGG | + | chr1_2:13970134-13970153 | Msa0057750:intron | 40.0% |
| ! | AATTGCTACTTGATGCCTGT+TGG | - | chr1_2:13970152-13970171 | None:intergenic | 40.0% |
| TGTCACGAACACCATATGAT+TGG | - | chr1_2:13970260-13970279 | None:intergenic | 40.0% | |
| TTAAGAGAGTTGTGTCCCTT+AGG | + | chr1_2:13970294-13970313 | Msa0057750:intron | 40.0% | |
| CTACACCTCTAAATGCCTAA+GGG | - | chr1_2:13970312-13970331 | None:intergenic | 40.0% | |
| TCTACACCTCTAAATGCCTA+AGG | - | chr1_2:13970313-13970332 | None:intergenic | 40.0% | |
| GCTCTGTAGTGTTGTAATCA+AGG | + | chr1_2:13970341-13970360 | Msa0057750:intron | 40.0% | |
| CGTTCGGGTAAAATAGTGAT+AGG | - | chr1_2:13970399-13970418 | None:intergenic | 40.0% | |
| !!! | TCGGTTTTGAGTACTACGTT+CGG | - | chr1_2:13970415-13970434 | None:intergenic | 40.0% |
| GAAGCTGGTAACACTAAAAG+AGG | - | chr1_2:13970492-13970511 | None:intergenic | 40.0% | |
| AAACCTCAATTATACCGCTC+AGG | + | chr1_2:13970704-13970723 | Msa0057750:CDS | 40.0% | |
| AGATATGATAAGTGCCTGAG+CGG | - | chr1_2:13970721-13970740 | None:intergenic | 40.0% | |
| ACAAAGCAAGGAAGACTGAA+GGG | - | chr1_2:13971020-13971039 | None:intergenic | 40.0% | |
| TACAAAGCAAGGAAGACTGA+AGG | - | chr1_2:13971021-13971040 | None:intergenic | 40.0% | |
| TCAGTCTTCCTTGCTTTGTA+AGG | + | chr1_2:13971021-13971040 | Msa0057750:intron | 40.0% | |
| ! | AGCGAAAACAAAGGAAGCAT+AGG | - | chr1_2:13971067-13971086 | None:intergenic | 40.0% |
| ACTGAATGCAGCGAAAACAA+AGG | - | chr1_2:13971076-13971095 | None:intergenic | 40.0% | |
| TACTCCAGTAATTAGTGGAG+TGG | + | chr1_2:13971551-13971570 | Msa0057750:three_prime_UTR | 40.0% | |
| AAAGCCACTCCACTAATTAC+TGG | - | chr1_2:13971558-13971577 | None:intergenic | 40.0% | |
| !! | AGTGGAGTGGCTTTATAAAG+AGG | + | chr1_2:13971564-13971583 | Msa0057750:three_prime_UTR | 40.0% |
| !! | CATCTCAACTTTGGTGTTCT+TGG | + | chr1_2:13971653-13971672 | Msa0057750:three_prime_UTR | 40.0% |
| !! | TGCGGTGACGATATTGGTTT+GGG | - | chr1_2:13968437-13968456 | None:intergenic | 45.0% |
| ! | TTGCGGTGACGATATTGGTT+TGG | - | chr1_2:13968438-13968457 | None:intergenic | 45.0% |
| TGGAATTGCGGTGACGATAT+TGG | - | chr1_2:13968443-13968462 | None:intergenic | 45.0% | |
| TTGCTTCTCCTGATGAAGAG+AGG | + | chr1_2:13968733-13968752 | Msa0057750:CDS | 45.0% | |
| TATAGAGCTTTGCTCAGGGT+GGG | - | chr1_2:13969030-13969049 | None:intergenic | 45.0% | |
| ACCCTGAGCAAAGCTCTATA+GGG | + | chr1_2:13969030-13969049 | Msa0057750:intron | 45.0% | |
| TCCCTATAGAGCTTTGCTCA+GGG | - | chr1_2:13969034-13969053 | None:intergenic | 45.0% | |
| TTCGAACCTGAGACCTTAAC+AGG | + | chr1_2:13969076-13969095 | Msa0057750:intron | 45.0% | |
| CTTAGAGCGTACTCCTGTTA+AGG | - | chr1_2:13969092-13969111 | None:intergenic | 45.0% | |
| ! | CTTAACAGGAGTACGCTCTA+AGG | + | chr1_2:13969090-13969109 | Msa0057750:intron | 45.0% |
| GCTCAAGCAACAAAACCACA+TGG | - | chr1_2:13969142-13969161 | None:intergenic | 45.0% | |
| GCACCAACACTTCAGATTGA+AGG | + | chr1_2:13969512-13969531 | Msa0057750:intron | 45.0% | |
| ! | CTTCAGATTGAAGGTGTGTC+CGG | + | chr1_2:13969521-13969540 | Msa0057750:intron | 45.0% |
| ! | ATGAAGCACCAACGCAAACA+CGG | - | chr1_2:13969644-13969663 | None:intergenic | 45.0% |
| !! | AGTACTGACAACGCATGCAA+CGG | - | chr1_2:13969879-13969898 | None:intergenic | 45.0% |
| GGTGTCCATGTCTGCATAAT+TGG | + | chr1_2:13970063-13970082 | Msa0057750:intron | 45.0% | |
| TGTGTCCCTTAGGCATTTAG+AGG | + | chr1_2:13970304-13970323 | Msa0057750:intron | 45.0% | |
| !!! | CGGTTTTGAGTACTACGTTC+GGG | - | chr1_2:13970414-13970433 | None:intergenic | 45.0% |
| GTGTAACCCTCCAATGTTTG+TGG | + | chr1_2:13970550-13970569 | Msa0057750:intron | 45.0% | |
| TGCTGTTCGCATGATTCCAT+GGG | + | chr1_2:13970674-13970693 | Msa0057750:CDS | 45.0% | |
| CAGGCACTTATCATATCTGC+TGG | + | chr1_2:13970723-13970742 | Msa0057750:CDS | 45.0% | |
| ! | GGTTTGCTCCTTACAAAGCA+AGG | - | chr1_2:13971032-13971051 | None:intergenic | 45.0% |
| AAGCATAGGAGCCCGAAAAA+TGG | - | chr1_2:13971053-13971072 | None:intergenic | 45.0% | |
| AAGATGAAACCGTGTCACGA+TGG | - | chr1_2:13971369-13971388 | None:intergenic | 45.0% | |
| ACCTGTACGACTTTGCTTTC+TGG | + | chr1_2:13971447-13971466 | Msa0057750:three_prime_UTR | 45.0% | |
| CCTGTACGACTTTGCTTTCT+GGG | + | chr1_2:13971448-13971467 | Msa0057750:three_prime_UTR | 45.0% | |
| !! | CTCAACTTTGGTGTTCTTGG+TGG | + | chr1_2:13971656-13971675 | Msa0057750:three_prime_UTR | 45.0% |
| ATAGAGCTTTGCTCAGGGTG+GGG | - | chr1_2:13969029-13969048 | None:intergenic | 50.0% | |
| CTATAGAGCTTTGCTCAGGG+TGG | - | chr1_2:13969031-13969050 | None:intergenic | 50.0% | |
| CACCCTGAGCAAAGCTCTAT+AGG | + | chr1_2:13969029-13969048 | Msa0057750:intron | 50.0% | |
| GTCCCTATAGAGCTTTGCTC+AGG | - | chr1_2:13969035-13969054 | None:intergenic | 50.0% | |
| !! | AGGGACTAGCCCACATAAGT+TGG | + | chr1_2:13969049-13969068 | Msa0057750:intron | 50.0% |
| CGTACTCCTGTTAAGGTCTC+AGG | - | chr1_2:13969085-13969104 | None:intergenic | 50.0% | |
| !! | TGTTGGTGCTACATAGCCCA+TGG | - | chr1_2:13969501-13969520 | None:intergenic | 50.0% |
| TATGGTGTCCGTGTTTGCGT+TGG | + | chr1_2:13969633-13969652 | Msa0057750:intron | 50.0% | |
| ! | TGCTACTTGATGCCTGTTGG+TGG | - | chr1_2:13970149-13970168 | None:intergenic | 50.0% |
| CTGCTGTTCGCATGATTCCA+TGG | + | chr1_2:13970673-13970692 | Msa0057750:CDS | 50.0% | |
| TCGCATGATTCCATGGGCAA+AGG | + | chr1_2:13970680-13970699 | Msa0057750:CDS | 50.0% | |
| TTGAGGTTTGCCTTTGCCCA+TGG | - | chr1_2:13970693-13970712 | None:intergenic | 50.0% | |
| GTGCCTGAGCGGTATAATTG+AGG | - | chr1_2:13970710-13970729 | None:intergenic | 50.0% | |
| ! | TCTGAGACACCATCGTGACA+CGG | + | chr1_2:13971357-13971376 | Msa0057750:CDS | 50.0% |
| ! | GAAGCTGCTTTACTCGTTGC+TGG | + | chr1_2:13971390-13971409 | Msa0057750:exon | 50.0% |
| ! | GCTTTACTCGTTGCTGGTCT+TGG | + | chr1_2:13971396-13971415 | Msa0057750:three_prime_UTR | 50.0% |
| CCCAGAAAGCAAAGTCGTAC+AGG | - | chr1_2:13971451-13971470 | None:intergenic | 50.0% | |
| !! | ATGGATTGGCTCGCTGGTGT+AGG | - | chr1_2:13969123-13969142 | None:intergenic | 55.0% |
| !! | AACCACATGGATTGGCTCGC+TGG | - | chr1_2:13969129-13969148 | None:intergenic | 55.0% |
| !! | CACAAGTGTCGGTGTCGTGT+TGG | - | chr1_2:13969566-13969585 | None:intergenic | 55.0% |
| CAACACGACACCGACACTTG+TGG | + | chr1_2:13969564-13969583 | Msa0057750:intron | 55.0% | |
| ! | TATGCAGAAGGTGTGCGTGC+TGG | + | chr1_2:13969839-13969858 | Msa0057750:intron | 55.0% |
| AGGTGTGCGTGCTGGATTCA+AGG | + | chr1_2:13969847-13969866 | Msa0057750:CDS | 55.0% | |
| ACTGACAACGCATGCAACGG+CGG | - | chr1_2:13969876-13969895 | None:intergenic | 55.0% | |
| TGCTTTCTGGGTCTGTCTCG+TGG | + | chr1_2:13971460-13971479 | Msa0057750:three_prime_UTR | 55.0% | |
| CACCAGCGAGCCAATCCATG+TGG | + | chr1_2:13969124-13969143 | Msa0057750:intron | 60.0% | |
| ACACGCGTCGTGTTGGACAC+CGG | - | chr1_2:13969543-13969562 | None:intergenic | 60.0% | |
| GTGTTGGACACGCGTCGTGT+TGG | - | chr1_2:13969550-13969569 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 13968415 | 13971699 | 13968415 | ID=Msa0057750;Name=Msa0057750 |
| chr1_2 | mRNA | 13968415 | 13971699 | 13968415 | ID=Msa0057750-mRNA-1;Parent=Msa0057750;Name=Msa0057750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=260|1|1|1|1|1|4|309|120 |
| chr1_2 | exon | 13968415 | 13968786 | 13968415 | ID=Msa0057750-mRNA-1:exon:5509;Parent=Msa0057750-mRNA-1 |
| chr1_2 | exon | 13969846 | 13969907 | 13969846 | ID=Msa0057750-mRNA-1:exon:5510;Parent=Msa0057750-mRNA-1 |
| chr1_2 | exon | 13970669 | 13970744 | 13970669 | ID=Msa0057750-mRNA-1:exon:5511;Parent=Msa0057750-mRNA-1 |
| chr1_2 | exon | 13971278 | 13971699 | 13971278 | ID=Msa0057750-mRNA-1:exon:5512;Parent=Msa0057750-mRNA-1 |
| chr1_2 | five_prime_UTR | 13968415 | 13968674 | 13968415 | ID=Msa0057750-mRNA-1:five_prime_utr;Parent=Msa0057750-mRNA-1 |
| chr1_2 | CDS | 13968675 | 13968786 | 13968675 | ID=Msa0057750-mRNA-1:cds;Parent=Msa0057750-mRNA-1 |
| chr1_2 | CDS | 13969846 | 13969907 | 13969846 | ID=Msa0057750-mRNA-1:cds;Parent=Msa0057750-mRNA-1 |
| chr1_2 | CDS | 13970669 | 13970744 | 13970669 | ID=Msa0057750-mRNA-1:cds;Parent=Msa0057750-mRNA-1 |
| chr1_2 | CDS | 13971278 | 13971390 | 13971278 | ID=Msa0057750-mRNA-1:cds;Parent=Msa0057750-mRNA-1 |
| chr1_2 | three_prime_UTR | 13971391 | 13971699 | 13971391 | ID=Msa0057750-mRNA-1:three_prime_utr;Parent=Msa0057750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
