Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098060 | MBN3312495.1 | 61.881 | 202 | 60 | 4 | 1 | 189 | 1 | 198 | 4.62e-67 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098060 | sp|P68428|H32_WHEAT | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 3.70e-59 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098060 | A0A446J0L7 | 60.648 | 216 | 56 | 6 | 1 | 189 | 1 | 214 | 2.61e-67 | 214 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa1098060 | 0.816146 | 6.427178e-52 | -8.615850e-47 |
| Msa0027800 | Msa1098060 | 0.810210 | 1.290909e-50 | -8.615850e-47 |
| Msa0030070 | Msa1098060 | 0.838852 | 2.247878e-57 | -8.615850e-47 |
| Msa0040640 | Msa1098060 | 0.803041 | 4.211526e-49 | -8.615850e-47 |
| Msa0050150 | Msa1098060 | 0.817743 | 2.815436e-52 | -8.615850e-47 |
| Msa0050530 | Msa1098060 | 0.831219 | 1.890047e-55 | -8.615850e-47 |
| Msa0078130 | Msa1098060 | 0.839917 | 1.189002e-57 | -8.615850e-47 |
| Msa0079410 | Msa1098060 | 0.809659 | 1.696227e-50 | -8.615850e-47 |
| Msa0090440 | Msa1098060 | 0.842713 | 2.185519e-58 | -8.615850e-47 |
| Msa0091350 | Msa1098060 | 0.818023 | 2.432947e-52 | -8.615850e-47 |
| Msa0100600 | Msa1098060 | 0.820077 | 8.298859e-53 | -8.615850e-47 |
| Msa0100890 | Msa1098060 | 0.821327 | 4.282716e-53 | -8.615850e-47 |
| Msa0608350 | Msa1098060 | 0.818444 | 1.953668e-52 | -8.615850e-47 |
| Msa0615630 | Msa1098060 | 0.813817 | 2.112646e-51 | -8.615850e-47 |
| Msa0620500 | Msa1098060 | 0.844322 | 8.125230e-59 | -8.615850e-47 |
| Msa0620510 | Msa1098060 | 0.811445 | 6.976822e-51 | -8.615850e-47 |
| Msa0640800 | Msa1098060 | 0.807614 | 4.637797e-50 | -8.615850e-47 |
| Msa0647440 | Msa1098060 | 0.840786 | 7.049303e-58 | -8.615850e-47 |
| Msa0648760 | Msa1098060 | 0.837293 | 5.662507e-57 | -8.615850e-47 |
| Msa0654740 | Msa1098060 | 0.814656 | 1.378596e-51 | -8.615850e-47 |
| Msa0657210 | Msa1098060 | 0.832096 | 1.148863e-55 | -8.615850e-47 |
| Msa0659200 | Msa1098060 | 0.851610 | 7.933167e-61 | -8.615850e-47 |
| Msa0663290 | Msa1098060 | 0.850605 | 1.524460e-60 | -8.615850e-47 |
| Msa0664070 | Msa1098060 | 0.848397 | 6.290819e-60 | -8.615850e-47 |
| Msa0684750 | Msa1098060 | 0.826396 | 2.776710e-54 | -8.615850e-47 |
| Msa0688380 | Msa1098060 | 0.809989 | 1.440577e-50 | -8.615850e-47 |
| Msa0688620 | Msa1098060 | 0.818136 | 2.294637e-52 | -8.615850e-47 |
| Msa0690320 | Msa1098060 | 0.825229 | 5.253907e-54 | -8.615850e-47 |
| Msa0690740 | Msa1098060 | 0.801413 | 9.110450e-49 | -8.615850e-47 |
| Msa0691270 | Msa1098060 | 0.826748 | 2.288286e-54 | -8.615850e-47 |
| Msa0701250 | Msa1098060 | 0.837680 | 4.505139e-57 | -8.615850e-47 |
| Msa0705140 | Msa1098060 | 0.841636 | 4.215052e-58 | -8.615850e-47 |
| Msa0705180 | Msa1098060 | 0.852882 | 3.447168e-61 | -8.615850e-47 |
| Msa0707260 | Msa1098060 | 0.843257 | 1.565638e-58 | -8.615850e-47 |
| Msa0717900 | Msa1098060 | 0.828639 | 8.041171e-55 | -8.615850e-47 |
| Msa0720280 | Msa1098060 | 0.846619 | 1.938419e-59 | -8.615850e-47 |
| Msa0737130 | Msa1098060 | 0.822228 | 2.649918e-53 | -8.615850e-47 |
| Msa0749190 | Msa1098060 | 0.816477 | 5.419799e-52 | -8.615850e-47 |
| Msa0750520 | Msa1098060 | 0.819048 | 1.425175e-52 | -8.615850e-47 |
| Msa0751720 | Msa1098060 | 0.821459 | 3.992469e-53 | -8.615850e-47 |
| Msa0803140 | Msa1098060 | 0.845634 | 3.594247e-59 | -8.615850e-47 |
| Msa0816080 | Msa1098060 | 0.848853 | 4.704255e-60 | -8.615850e-47 |
| Msa0837680 | Msa1098060 | 0.861615 | 9.056321e-64 | -8.615850e-47 |
| Msa0841500 | Msa1098060 | 0.852370 | 4.827728e-61 | -8.615850e-47 |
| Msa0123320 | Msa1098060 | 0.807082 | 6.014175e-50 | -8.615850e-47 |
| Msa0125590 | Msa1098060 | 0.849178 | 3.819084e-60 | -8.615850e-47 |
| Msa0127340 | Msa1098060 | 0.803762 | 2.986292e-49 | -8.615850e-47 |
| Msa0165830 | Msa1098060 | 0.817265 | 3.606214e-52 | -8.615850e-47 |
| Msa0165840 | Msa1098060 | 0.802177 | 6.349597e-49 | -8.615850e-47 |
| Msa0168380 | Msa1098060 | 0.808785 | 2.610701e-50 | -8.615850e-47 |
| Msa0184700 | Msa1098060 | 0.808743 | 2.666297e-50 | -8.615850e-47 |
| Msa0186180 | Msa1098060 | 0.807410 | 5.123980e-50 | -8.615850e-47 |
| Msa0186360 | Msa1098060 | 0.806530 | 7.866326e-50 | -8.615850e-47 |
| Msa0204970 | Msa1098060 | 0.814082 | 1.846690e-51 | -8.615850e-47 |
| Msa0225800 | Msa1098060 | 0.806147 | 9.474817e-50 | -8.615850e-47 |
| Msa0364680 | Msa1098060 | 0.834845 | 2.368212e-56 | -8.615850e-47 |
| Msa0373170 | Msa1098060 | 0.833906 | 4.075113e-56 | -8.615850e-47 |
| Msa0382230 | Msa1098060 | 0.805891 | 1.072616e-49 | -8.615850e-47 |
| Msa0415820 | Msa1098060 | 0.804577 | 2.020516e-49 | -8.615850e-47 |
| Msa0420430 | Msa1098060 | 0.802023 | 6.828229e-49 | -8.615850e-47 |
| Msa0421750 | Msa1098060 | 0.831473 | 1.636277e-55 | -8.615850e-47 |
| Msa0433630 | Msa1098060 | 0.806473 | 8.088649e-50 | -8.615850e-47 |
| Msa0433760 | Msa1098060 | 0.825199 | 5.339560e-54 | -8.615850e-47 |
| Msa0467690 | Msa1098060 | 0.839987 | 1.140227e-57 | -8.615850e-47 |
| Msa0477630 | Msa1098060 | 0.825851 | 3.741478e-54 | -8.615850e-47 |
| Msa0478140 | Msa1098060 | 0.809945 | 1.471887e-50 | -8.615850e-47 |
| Msa0478200 | Msa1098060 | 0.808168 | 3.536859e-50 | -8.615850e-47 |
| Msa1000780 | Msa1098060 | 0.822599 | 2.173410e-53 | -8.615850e-47 |
| Msa1008670 | Msa1098060 | 0.867835 | 1.021144e-65 | -8.615850e-47 |
| Msa1021560 | Msa1098060 | 0.808097 | 3.661018e-50 | -8.615850e-47 |
| Msa1033920 | Msa1098060 | 0.824342 | 8.501709e-54 | -8.615850e-47 |
| Msa1071410 | Msa1098060 | 0.820579 | 6.365011e-53 | -8.615850e-47 |
| Msa1076020 | Msa1098060 | 0.817018 | 4.098288e-52 | -8.615850e-47 |
| Msa1078990 | Msa1098060 | 0.806114 | 9.624910e-50 | -8.615850e-47 |
| Msa1082380 | Msa1098060 | 0.810519 | 1.106990e-50 | -8.615850e-47 |
| Msa1085680 | Msa1098060 | 0.803750 | 3.003519e-49 | -8.615850e-47 |
| Msa1098060 | Msa1106220 | 0.816965 | 4.212747e-52 | -8.615850e-47 |
| Msa1098060 | Msa1127280 | 0.825408 | 4.764715e-54 | -8.615850e-47 |
| Msa1098060 | Msa1144990 | 0.802157 | 6.410836e-49 | -8.615850e-47 |
| Msa1098060 | Msa1147560 | 0.802737 | 4.868047e-49 | -8.615850e-47 |
| Msa1098060 | Msa1162880 | 0.814270 | 1.678523e-51 | -8.615850e-47 |
| Msa1098060 | Msa1163180 | 0.820071 | 8.325206e-53 | -8.615850e-47 |
| Msa1098060 | Msa1165480 | 0.827991 | 1.152158e-54 | -8.615850e-47 |
| Msa1098060 | Msa1191000 | 0.852130 | 5.647105e-61 | -8.615850e-47 |
| Msa1098060 | Msa1201780 | 0.806840 | 6.764237e-50 | -8.615850e-47 |
| Msa1098060 | Msa1215980 | 0.844850 | 5.855738e-59 | -8.615850e-47 |
| Msa1098060 | Msa1215990 | 0.809987 | 1.441925e-50 | -8.615850e-47 |
| Msa1098060 | Msa1240940 | 0.814552 | 1.453386e-51 | -8.615850e-47 |
| Msa1098060 | Msa1254420 | 0.836594 | 8.541980e-57 | -8.615850e-47 |
| Msa1098060 | Msa1263740 | 0.800998 | 1.107553e-48 | -8.615850e-47 |
| Msa1098060 | Msa1267930 | 0.835731 | 1.414269e-56 | -8.615850e-47 |
| Msa1098060 | Msa1282300 | 0.825194 | 5.353741e-54 | -8.615850e-47 |
| Msa1098060 | Msa1294280 | 0.801813 | 7.542306e-49 | -8.615850e-47 |
| Msa1098060 | Msa1294460 | 0.802960 | 4.377319e-49 | -8.615850e-47 |
| Msa1098060 | Msa1294790 | 0.835881 | 1.296448e-56 | -8.615850e-47 |
| Msa1098060 | Msa1301820 | 0.828105 | 1.081709e-54 | -8.615850e-47 |
| Msa1098060 | Msa1301830 | 0.806402 | 8.370625e-50 | -8.615850e-47 |
| Msa1098060 | Msa1332950 | 0.809908 | 1.499316e-50 | -8.615850e-47 |
| Msa1098060 | Msa1339170 | 0.800832 | 1.197706e-48 | -8.615850e-47 |
| Msa1098060 | Msa1339230 | 0.855362 | 6.637761e-62 | -8.615850e-47 |
| Msa1098060 | Msa1361930 | 0.827064 | 1.922855e-54 | -8.615850e-47 |
| Msa1098060 | Msa1381800 | 0.817219 | 3.694409e-52 | -8.615850e-47 |
| Msa1098060 | Msa1393560 | 0.846541 | 2.035898e-59 | -8.615850e-47 |
| Msa1098060 | Msa1399190 | 0.823557 | 1.299041e-53 | -8.615850e-47 |
| Msa1098060 | Msa1410190 | 0.804327 | 2.277850e-49 | -8.615850e-47 |
| Msa1098060 | Msa1426320 | 0.817937 | 2.544829e-52 | -8.615850e-47 |
| Msa1098060 | Msa1432520 | 0.801146 | 1.033216e-48 | -8.615850e-47 |
| Msa1098060 | Msa1435100 | 0.800621 | 1.322378e-48 | -8.615850e-47 |
| Msa1098060 | Msa1439730 | 0.809628 | 1.722290e-50 | -8.615850e-47 |
| Msa0249870 | Msa1098060 | 0.821749 | 3.421969e-53 | -8.615850e-47 |
| Msa0281540 | Msa1098060 | 0.829484 | 5.017311e-55 | -8.615850e-47 |
| Msa0320290 | Msa1098060 | 0.804348 | 2.255756e-49 | -8.615850e-47 |
| Msa0320580 | Msa1098060 | 0.820451 | 6.811518e-53 | -8.615850e-47 |
| Msa0344110 | Msa1098060 | 0.827223 | 1.761825e-54 | -8.615850e-47 |
| Msa0503990 | Msa1098060 | 0.828521 | 8.585508e-55 | -8.615850e-47 |
| Msa0506540 | Msa1098060 | 0.809813 | 1.571852e-50 | -8.615850e-47 |
| Msa0506880 | Msa1098060 | 0.819015 | 1.449662e-52 | -8.615850e-47 |
| Msa0507810 | Msa1098060 | 0.810986 | 8.773179e-51 | -8.615850e-47 |
| Msa0507820 | Msa1098060 | 0.822470 | 2.328902e-53 | -8.615850e-47 |
| Msa0514020 | Msa1098060 | 0.851950 | 6.355569e-61 | -8.615850e-47 |
| Msa0520680 | Msa1098060 | 0.807601 | 4.668303e-50 | -8.615850e-47 |
| Msa0527850 | Msa1098060 | 0.837763 | 4.291334e-57 | -8.615850e-47 |
| Msa0541740 | Msa1098060 | 0.838665 | 2.512538e-57 | -8.615850e-47 |
| Msa0544410 | Msa1098060 | 0.821861 | 3.224247e-53 | -8.615850e-47 |
| Msa0544430 | Msa1098060 | 0.812331 | 4.474319e-51 | -8.615850e-47 |
| Msa0554300 | Msa1098060 | 0.836409 | 9.517916e-57 | -8.615850e-47 |
| Msa0561560 | Msa1098060 | 0.817966 | 2.506411e-52 | -8.615850e-47 |
| Msa0563900 | Msa1098060 | 0.803038 | 4.219096e-49 | -8.615850e-47 |
| Msa0572830 | Msa1098060 | 0.860321 | 2.241460e-63 | -8.615850e-47 |
| Msa0576330 | Msa1098060 | 0.806658 | 7.391026e-50 | -8.615850e-47 |
| Msa0582460 | Msa1098060 | 0.832384 | 9.747590e-56 | -8.615850e-47 |
| Msa0584530 | Msa1098060 | 0.828483 | 8.769773e-55 | -8.615850e-47 |
| Msa0586200 | Msa1098060 | 0.828892 | 6.981191e-55 | -8.615850e-47 |
| Msa0846900 | Msa1098060 | 0.814397 | 1.573468e-51 | -8.615850e-47 |
| Msa0856610 | Msa1098060 | 0.841384 | 4.910756e-58 | -8.615850e-47 |
| Msa0861440 | Msa1098060 | 0.853600 | 2.146440e-61 | -8.615850e-47 |
| Msa0879920 | Msa1098060 | 0.804114 | 2.522918e-49 | -8.615850e-47 |
| Msa0900090 | Msa1098060 | 0.818365 | 2.036194e-52 | -8.615850e-47 |
| Msa0926310 | Msa1098060 | 0.826399 | 2.771060e-54 | -8.615850e-47 |
| Msa0926760 | Msa1098060 | 0.825615 | 4.256240e-54 | -8.615850e-47 |
| Msa0929900 | Msa1098060 | 0.812181 | 4.824311e-51 | -8.615850e-47 |
| Msa0931310 | Msa1098060 | 0.825168 | 5.428896e-54 | -8.615850e-47 |
| Msa0976380 | Msa1098060 | 0.808880 | 2.491687e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098060 | MtrunA17_Chr5g0410931 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr5g0410951 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr8g0383851 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr8g0383781 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr8g0390361 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr2g0295191 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr7g0237661 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr4g0033041 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr7g0218971 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr4g0046301 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr8g0364801 | 92.233 | 103 | 2 | 1 | 1 | 97 | 1 | 103 | 2.72e-60 | 184 |
| Msa1098060 | MtrunA17_Chr4g0054151 | 88.350 | 103 | 6 | 1 | 1 | 97 | 4 | 106 | 1.61e-57 | 177 |
| Msa1098060 | MtrunA17_Chr4g0054161 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 1.67e-57 | 177 |
| Msa1098060 | MtrunA17_Chr8g0363741 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 1.67e-57 | 177 |
| Msa1098060 | MtrunA17_Chr1g0156021 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 1.67e-57 | 177 |
| Msa1098060 | MtrunA17_Chr8g0388121 | 87.379 | 103 | 7 | 1 | 1 | 97 | 1 | 103 | 5.25e-57 | 176 |
| Msa1098060 | MtrunA17_Chr2g0319141 | 81.553 | 103 | 13 | 1 | 1 | 97 | 1 | 103 | 7.75e-53 | 165 |
| Msa1098060 | MtrunA17_Chr2g0319151 | 81.553 | 103 | 13 | 1 | 1 | 97 | 1 | 103 | 7.75e-53 | 165 |
| Msa1098060 | MtrunA17_Chr2g0319131 | 74.336 | 113 | 13 | 2 | 1 | 97 | 1 | 113 | 9.85e-47 | 150 |
| Msa1098060 | MtrunA17_Chr2g0319121 | 74.038 | 104 | 19 | 2 | 1 | 97 | 1 | 103 | 2.75e-43 | 141 |
| Msa1098060 | MtrunA17_Chr7g0240791 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 6.66e-40 | 133 |
| Msa1098060 | MtrunA17_Chr7g0218961 | 78.481 | 79 | 11 | 1 | 25 | 97 | 2 | 80 | 3.66e-35 | 119 |
| Msa1098060 | MtrunA17_Chr5g0407311 | 65.347 | 101 | 30 | 3 | 1 | 97 | 1 | 100 | 2.47e-32 | 112 |
| Msa1098060 | MtrunA17_Chr7g0222991 | 56.311 | 103 | 38 | 2 | 1 | 97 | 10 | 111 | 9.86e-26 | 96.7 |
| Msa1098060 | MtrunA17_Chr7g0223001 | 40.141 | 142 | 59 | 6 | 3 | 132 | 27 | 154 | 3.21e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1098060 | AT1G09200.1 | 91.262 | 103 | 3 | 1 | 1 | 97 | 1 | 103 | 1.12e-59 | 183 |
| Msa1098060 | AT5G65360.1 | 91.262 | 103 | 3 | 1 | 1 | 97 | 1 | 103 | 1.12e-59 | 183 |
| Msa1098060 | AT5G10390.1 | 91.262 | 103 | 3 | 1 | 1 | 97 | 1 | 103 | 1.12e-59 | 183 |
| Msa1098060 | AT5G10400.1 | 91.262 | 103 | 3 | 1 | 1 | 97 | 1 | 103 | 1.12e-59 | 183 |
| Msa1098060 | AT3G27360.1 | 91.262 | 103 | 3 | 1 | 1 | 97 | 1 | 103 | 1.12e-59 | 183 |
| Msa1098060 | AT4G40030.3 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40030.1 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40030.4 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT5G10980.1 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40040.2 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40040.3 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40040.1 | 88.350 | 103 | 6 | 1 | 1 | 97 | 1 | 103 | 2.30e-57 | 177 |
| Msa1098060 | AT4G40030.2 | 88.350 | 103 | 6 | 1 | 1 | 97 | 29 | 131 | 5.08e-57 | 177 |
| Msa1098060 | AT5G65350.1 | 86.408 | 103 | 8 | 1 | 1 | 97 | 1 | 103 | 4.19e-56 | 174 |
| Msa1098060 | AT1G13370.1 | 85.437 | 103 | 9 | 1 | 1 | 97 | 1 | 103 | 4.76e-54 | 169 |
| Msa1098060 | AT1G75600.1 | 84.466 | 103 | 10 | 1 | 1 | 97 | 1 | 103 | 5.43e-54 | 168 |
| Msa1098060 | AT1G19890.1 | 79.808 | 104 | 14 | 2 | 1 | 97 | 1 | 104 | 1.95e-49 | 157 |
| Msa1098060 | AT5G12910.1 | 61.165 | 103 | 29 | 3 | 1 | 97 | 1 | 98 | 1.34e-34 | 119 |
Find 36 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATATCCTTAGGCATTA+TGG | 0.232216 | 7_3:-24438877 | None:intergenic |
| CAATTTCACGAACCAATCTT+TGG | 0.256116 | 7_3:-24435663 | None:intergenic |
| TTCTTCACTCCTCCGGTTGC+AGG | 0.260302 | 7_3:-24435550 | None:intergenic |
| CAATTTCAGGAACCAATCTT+TGG | 0.268881 | 7_3:-24438727 | None:intergenic |
| TTGAAATCCTGAGCAATTTC+AGG | 0.269634 | 7_3:-24438740 | None:intergenic |
| TCACGAAGCGCGACTGTTCC+TGG | 0.312619 | 7_3:-24435589 | None:intergenic |
| AAACAGCGCTGCTCTGAAAT+TGG | 0.341859 | 7_3:-24438772 | None:intergenic |
| GAAACTTCCTTTCCAAAGAT+TGG | 0.349801 | 7_3:+24438715 | Msa1098060:CDS |
| GTCGCTGAAGCGTGTCTTGT+TGG | 0.358383 | 7_3:+24438809 | Msa1098060:CDS |
| GAAACTTCCATTCCAAAGAT+TGG | 0.376853 | 7_3:+24435651 | Msa1098060:CDS |
| AAAGCATTGAGCTTCTCATT+AGG | 0.377128 | 7_3:+24438693 | Msa1098060:CDS |
| GCTGCTGAATCGTATCTTGT+TGG | 0.429285 | 7_3:+24435745 | Msa1098060:CDS |
| AGAGCACCGAGCTTCTCATT+AGG | 0.438663 | 7_3:+24435629 | Msa1098060:CDS |
| AGAAAATCAGCTCCTGCAAC+CGG | 0.461012 | 7_3:+24435538 | Msa1098060:CDS |
| ATTGGTTCCTGAAATTGCTC+AGG | 0.462317 | 7_3:+24438733 | Msa1098060:CDS |
| TGGTGGCGAGTTGTTTCCGT+GGG | 0.469293 | 7_3:-24435507 | None:intergenic |
| GTGTGGCTTCTTCACTCCTC+CGG | 0.469362 | 7_3:-24435557 | None:intergenic |
| GCCGCAAGAAAATCAGCATC+AGG | 0.485609 | 7_3:+24438636 | Msa1098060:intron |
| CGAGCGAGTTGAATATCCTT+AGG | 0.499677 | 7_3:-24438885 | None:intergenic |
| TCACGAACCAATCTTTGGAA+TGG | 0.528589 | 7_3:-24435658 | None:intergenic |
| AAGAAAATCAGCATCAGGAA+AGG | 0.531891 | 7_3:+24438641 | Msa1098060:CDS |
| TCAGGAACCAATCTTTGGAA+AGG | 0.539531 | 7_3:-24438722 | None:intergenic |
| GAGAGTTACCATAATGCCTA+AGG | 0.552184 | 7_3:+24438869 | Msa1098060:CDS |
| TTGGTGGCGAGTTGTTTCCG+TGG | 0.577381 | 7_3:-24435508 | None:intergenic |
| CAAACAGCGCGAAAATCCAC+CGG | 0.580265 | 7_3:+24435475 | Msa1098060:CDS |
| CTCTTAGCATGAATAGCACA+AGG | 0.583548 | 7_3:-24438849 | None:intergenic |
| CGGTGCTCTTCTGATACTTG+CGG | 0.587237 | 7_3:-24435615 | None:intergenic |
| TTCAGCGACTTCTTGAAGAG+TGG | 0.626203 | 7_3:-24438795 | None:intergenic |
| CCACCGGCGGAAAAGCCCCA+CGG | 0.627971 | 7_3:+24435491 | Msa1098060:CDS |
| AAGTTTCCTAATGAGAAGCT+CGG | 0.631897 | 7_3:-24435635 | None:intergenic |
| AAGCCACACAGATTCCGTCC+AGG | 0.632383 | 7_3:+24435571 | Msa1098060:CDS |
| AAATCAGCTCCTGCAACCGG+AGG | 0.655480 | 7_3:+24435541 | Msa1098060:CDS |
| GAAGCGCGACTGTTCCTGGA+CGG | 0.668213 | 7_3:-24435585 | None:intergenic |
| GTTCCTGGACGGAATCTGTG+TGG | 0.677012 | 7_3:-24435574 | None:intergenic |
| ACAGCGCGAAAATCCACCGG+CGG | 0.693704 | 7_3:+24435478 | Msa1098060:CDS |
| GGTGGCGAGTTGTTTCCGTG+GGG | 0.739791 | 7_3:-24435506 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAATGGATATTTA+TGG | - | chr7_3:24436152-24436171 | None:intergenic | 10.0% |
| !!! | AACTCATTTTTTAAAAAAAA+TGG | - | chr7_3:24436162-24436181 | None:intergenic | 10.0% |
| !!! | ATTTTGATATTAAAATAGAA+TGG | - | chr7_3:24436505-24436524 | None:intergenic | 10.0% |
| !!! | TTCTATTTTAATATCAAAAT+TGG | + | chr7_3:24436505-24436524 | Msa1098060:intron | 10.0% |
| !! | AATATTAAAAGTAATTAAGT+TGG | + | chr7_3:24436721-24436740 | Msa1098060:intron | 10.0% |
| !!! | TATAAAATCAAATTTTTAAC+AGG | - | chr7_3:24437552-24437571 | None:intergenic | 10.0% |
| !!! | TGTTAAAAATTTGATTTTAT+AGG | + | chr7_3:24437551-24437570 | Msa1098060:intron | 10.0% |
| !! | AAAATTAAACATATTGAATT+TGG | + | chr7_3:24438137-24438156 | Msa1098060:intron | 10.0% |
| !!! | TCTTTAGATGTTTTATAATT+AGG | + | chr7_3:24435897-24435916 | Msa1098060:intron | 15.0% |
| !!! | CTTTAGATGTTTTATAATTA+GGG | + | chr7_3:24435898-24435917 | Msa1098060:intron | 15.0% |
| !!! | TGAAAAAAGTGATTTTTTTT+AGG | + | chr7_3:24436327-24436346 | Msa1098060:intron | 15.0% |
| !!! | GAAAAAAGTGATTTTTTTTA+GGG | + | chr7_3:24436328-24436347 | Msa1098060:intron | 15.0% |
| !!! | TAAAAAAAATCTGAAACAAA+CGG | + | chr7_3:24436368-24436387 | Msa1098060:intron | 15.0% |
| !!! | AACAAAAGTATCAAATTTTT+TGG | + | chr7_3:24436616-24436635 | Msa1098060:intron | 15.0% |
| !! | TAATCAAGACAATTAATATA+GGG | + | chr7_3:24436746-24436765 | Msa1098060:intron | 15.0% |
| !!! | TTAGTTTGAAATTTGATTTA+TGG | + | chr7_3:24437030-24437049 | Msa1098060:intron | 15.0% |
| !!! | TAGTTTGAAATTTGATTTAT+GGG | + | chr7_3:24437031-24437050 | Msa1098060:intron | 15.0% |
| !! | ATTACCATTAAAATGAATTA+TGG | + | chr7_3:24438446-24438465 | Msa1098060:intron | 15.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+TGG | - | chr7_3:24436310-24436329 | None:intergenic | 20.0% |
| !!! | AAAAAAAATCTGAAACAAAC+GGG | + | chr7_3:24436369-24436388 | Msa1098060:intron | 20.0% |
| !! | TATAATTGTTTGGTTGAAAT+AGG | + | chr7_3:24436535-24436554 | Msa1098060:intron | 20.0% |
| !! | ATAATTGTTTGGTTGAAATA+GGG | + | chr7_3:24436536-24436555 | Msa1098060:intron | 20.0% |
| !!! | TACTTTTGTTTCTTCTAAAA+AGG | - | chr7_3:24436606-24436625 | None:intergenic | 20.0% |
| !! | GGTCAAAATTTCTTATAAAA+AGG | - | chr7_3:24436643-24436662 | None:intergenic | 20.0% |
| !! | GTAATCAAGACAATTAATAT+AGG | + | chr7_3:24436745-24436764 | Msa1098060:intron | 20.0% |
| !! | AATCAAGACAATTAATATAG+GGG | + | chr7_3:24436747-24436766 | Msa1098060:intron | 20.0% |
| !!! | GGGAGTATTTAATTTAATTT+TGG | + | chr7_3:24436883-24436902 | Msa1098060:intron | 20.0% |
| !!! | TTTAATTTTGGTTAGTAATG+TGG | + | chr7_3:24436895-24436914 | Msa1098060:intron | 20.0% |
| !!! | AGTTTGAAATTTGATTTATG+GGG | + | chr7_3:24437032-24437051 | Msa1098060:intron | 20.0% |
| !! | AAACAATATTAATCACGTTA+AGG | - | chr7_3:24438069-24438088 | None:intergenic | 20.0% |
| !! | TTAATATTGTTTAGTACTGT+AGG | + | chr7_3:24438077-24438096 | Msa1098060:intron | 20.0% |
| !!! | ACATCCATAATTCATTTTAA+TGG | - | chr7_3:24438453-24438472 | None:intergenic | 20.0% |
| !! | GATGTTTTATAATTAGGGTT+TGG | + | chr7_3:24435903-24435922 | Msa1098060:intron | 25.0% |
| ! | ATTAGATTCAAAACCTAACA+GGG | - | chr7_3:24435951-24435970 | None:intergenic | 25.0% |
| ! | AATTAGATTCAAAACCTAAC+AGG | - | chr7_3:24435952-24435971 | None:intergenic | 25.0% |
| ! | ATTGTTGAATTGATCTGTTA+AGG | + | chr7_3:24436017-24436036 | Msa1098060:intron | 25.0% |
| ! | TTGTTGAATTGATCTGTTAA+GGG | + | chr7_3:24436018-24436037 | Msa1098060:intron | 25.0% |
| ! | AATGGATATTTATGGATAGT+AGG | - | chr7_3:24436144-24436163 | None:intergenic | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr7_3:24436243-24436262 | Msa1098060:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr7_3:24436244-24436263 | Msa1098060:intron | 25.0% |
| ! | CATTAAGTGTCATAGATTTA+GGG | - | chr7_3:24436395-24436414 | None:intergenic | 25.0% |
| ! | ACATTAAGTGTCATAGATTT+AGG | - | chr7_3:24436396-24436415 | None:intergenic | 25.0% |
| ! | CAACCAAACAATTATATACA+TGG | - | chr7_3:24436531-24436550 | None:intergenic | 25.0% |
| !! | TGACCAATTTTCAAATACAT+TGG | + | chr7_3:24436658-24436677 | Msa1098060:intron | 25.0% |
| ! | CATCCAATGTATTTGAAAAT+TGG | - | chr7_3:24436664-24436683 | None:intergenic | 25.0% |
| !! | TTGTTTCTTGTATAAAGTAC+TGG | + | chr7_3:24436859-24436878 | Msa1098060:intron | 25.0% |
| ! | TAATAAAGACCAAACAATTC+AGG | - | chr7_3:24436985-24437004 | None:intergenic | 25.0% |
| ! | TCATAATTAGAGAAAAGTCA+TGG | + | chr7_3:24437098-24437117 | Msa1098060:intron | 25.0% |
| ! | CATAATTAGAGAAAAGTCAT+GGG | + | chr7_3:24437099-24437118 | Msa1098060:intron | 25.0% |
| ! | GTTAGTCATACTATTACTAA+TGG | - | chr7_3:24437235-24437254 | None:intergenic | 25.0% |
| !!! | AATTACTGCCAATTTTGATT+TGG | + | chr7_3:24437338-24437357 | Msa1098060:intron | 25.0% |
| ! | TTAGTTCACCAAATCAAAAT+TGG | - | chr7_3:24437349-24437368 | None:intergenic | 25.0% |
| ! | GTGAACTAAATCATTTATCA+AGG | + | chr7_3:24437360-24437379 | Msa1098060:intron | 25.0% |
| ! | AACTAAATCATTTATCAAGG+TGG | + | chr7_3:24437363-24437382 | Msa1098060:intron | 25.0% |
| ! | AACTCAATGAGTGTATATTT+CGG | - | chr7_3:24437452-24437471 | None:intergenic | 25.0% |
| !! | AATTGATTCACATCGAAAAA+AGG | - | chr7_3:24437521-24437540 | None:intergenic | 25.0% |
| !!! | TTTGATTTTATAGGAACCAA+TGG | + | chr7_3:24437560-24437579 | Msa1098060:intron | 25.0% |
| ! | AAATGGTTGAAAGAAAATGT+AGG | + | chr7_3:24437720-24437739 | Msa1098060:intron | 25.0% |
| !! | CAATGCTTTAAACCTTATTA+GGG | + | chr7_3:24437894-24437913 | Msa1098060:intron | 25.0% |
| !!! | ATAGAAAGCTCTAGAATATA+GGG | - | chr7_3:24438417-24438436 | None:intergenic | 25.0% |
| ! | TTAATATATTACGACAGTCT+TGG | + | chr7_3:24438472-24438491 | Msa1098060:intron | 25.0% |
| ! | TACGTAAATCTGTTCTTATA+AGG | + | chr7_3:24438503-24438522 | Msa1098060:intron | 25.0% |
| ! | ATGGTATAGTGTATACAATT+TGG | - | chr7_3:24438599-24438618 | None:intergenic | 25.0% |
| ! | TAGAGTTTAATTTCCCTGTT+AGG | + | chr7_3:24435935-24435954 | Msa1098060:intron | 30.0% |
| ! | CTTGCTTTAATTTCTCTGTT+AGG | + | chr7_3:24435975-24435994 | Msa1098060:intron | 30.0% |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr7_3:24436247-24436266 | None:intergenic | 30.0% | |
| TGGCCATGTATATAATTGTT+TGG | + | chr7_3:24436525-24436544 | Msa1098060:intron | 30.0% | |
| ! | TTGTTTCTTCTAAAAAGGAC+TGG | - | chr7_3:24436601-24436620 | None:intergenic | 30.0% |
| !! | AATTAATATAGGGGCACTAA+TGG | + | chr7_3:24436756-24436775 | Msa1098060:intron | 30.0% |
| ! | TTAGTTTCAAAGTGTTTCCT+TGG | + | chr7_3:24436817-24436836 | Msa1098060:intron | 30.0% |
| TACATAAATCACATAGACCA+AGG | - | chr7_3:24436837-24436856 | None:intergenic | 30.0% | |
| !! | TTTCTTGTATAAAGTACTGG+AGG | + | chr7_3:24436862-24436881 | Msa1098060:intron | 30.0% |
| !! | TTCTTGTATAAAGTACTGGA+GGG | + | chr7_3:24436863-24436882 | Msa1098060:intron | 30.0% |
| !! | ATTTATGGGGAGATTTTTAG+AGG | + | chr7_3:24437045-24437064 | Msa1098060:intron | 30.0% |
| !! | TTTATGGGGAGATTTTTAGA+GGG | + | chr7_3:24437046-24437065 | Msa1098060:intron | 30.0% |
| ATGCATAATCCGTGAAAAAA+TGG | - | chr7_3:24437159-24437178 | None:intergenic | 30.0% | |
| TGGCAGTAATTTATTTAGTC+TGG | - | chr7_3:24437329-24437348 | None:intergenic | 30.0% | |
| ! | CTTACATAACAATGATTTGG+TGG | - | chr7_3:24437689-24437708 | None:intergenic | 30.0% |
| GCTCTTACATAACAATGATT+TGG | - | chr7_3:24437692-24437711 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCAACCATTTCAG+AGG | - | chr7_3:24437717-24437736 | None:intergenic | 30.0% |
| ! | AAATTGATGTTTTGCAGCTA+AGG | + | chr7_3:24437840-24437859 | Msa1098060:intron | 30.0% |
| ! | CCTAATAAGGTTTAAAGCAT+TGG | - | chr7_3:24437896-24437915 | None:intergenic | 30.0% |
| ! | CCAATGCTTTAAACCTTATT+AGG | + | chr7_3:24437893-24437912 | Msa1098060:intron | 30.0% |
| CTCTATCCTAAAAAGTTCTA+CGG | - | chr7_3:24438006-24438025 | None:intergenic | 30.0% | |
| ! | TCAATGTTGAGATGTGATTT+TGG | + | chr7_3:24438036-24438055 | Msa1098060:intron | 30.0% |
| ! | CATTTGATACTCTTGTTTCT+TGG | - | chr7_3:24438203-24438222 | None:intergenic | 30.0% |
| TTTGATTCTCGATAGCTTAA+TGG | + | chr7_3:24438253-24438272 | Msa1098060:intron | 30.0% | |
| !! | GATAGAAAGCTCTAGAATAT+AGG | - | chr7_3:24438418-24438437 | None:intergenic | 30.0% |
| ATAAGGTTCTTCACTCATTA+TGG | + | chr7_3:24438520-24438539 | Msa1098060:intron | 30.0% | |
| TTGAATATCCTTAGGCATTA+TGG | - | chr7_3:24438880-24438899 | None:intergenic | 30.0% | |
| AAGTTTCCTAATGAGAAGCT+CGG | - | chr7_3:24435638-24435657 | None:intergenic | 35.0% | |
| GAAACTTCCATTCCAAAGAT+TGG | + | chr7_3:24435651-24435670 | Msa1098060:CDS | 35.0% | |
| CAATTTCACGAACCAATCTT+TGG | - | chr7_3:24435666-24435685 | None:intergenic | 35.0% | |
| GAGAGTTACTATTATGCCTA+AGG | + | chr7_3:24435807-24435826 | Msa1098060:intron | 35.0% | |
| ! | CTTGCAAGTTGAATATCCTT+AGG | - | chr7_3:24435826-24435845 | None:intergenic | 35.0% |
| GGGCTTAGAAGATTTGATTA+CGG | + | chr7_3:24435863-24435882 | Msa1098060:intron | 35.0% | |
| AAACAATTCAGGTGATTAGC+AGG | - | chr7_3:24436974-24436993 | None:intergenic | 35.0% | |
| TGCTAATCACCTGAATTGTT+TGG | + | chr7_3:24436973-24436992 | Msa1098060:intron | 35.0% | |
| AATGAGAGTTCAAAGACAGT+TGG | + | chr7_3:24437005-24437024 | Msa1098060:intron | 35.0% | |
| !! | TTATGGGGAGATTTTTAGAG+GGG | + | chr7_3:24437047-24437066 | Msa1098060:intron | 35.0% |
| CTATTGACCATACCCATTAT+CGG | + | chr7_3:24437258-24437277 | Msa1098060:intron | 35.0% | |
| GATATATTGCAGATCAGCAT+TGG | - | chr7_3:24437290-24437309 | None:intergenic | 35.0% | |
| TTGTGATAAGCCTCTATCAA+AGG | + | chr7_3:24437481-24437500 | Msa1098060:intron | 35.0% | |
| TGTGATAAGCCTCTATCAAA+GGG | + | chr7_3:24437482-24437501 | Msa1098060:intron | 35.0% | |
| ATTCACATCGAAAAAAGGAG+GGG | - | chr7_3:24437516-24437535 | None:intergenic | 35.0% | |
| GATTCACATCGAAAAAAGGA+GGG | - | chr7_3:24437517-24437536 | None:intergenic | 35.0% | |
| TGATTCACATCGAAAAAAGG+AGG | - | chr7_3:24437518-24437537 | None:intergenic | 35.0% | |
| GCATAAGTCTCAAAAACCAT+TGG | - | chr7_3:24437579-24437598 | None:intergenic | 35.0% | |
| TCAACTTCTAATAGTAGCAC+AGG | + | chr7_3:24437602-24437621 | Msa1098060:intron | 35.0% | |
| AATATCCTGCATGAAGTCAT+GGG | - | chr7_3:24437631-24437650 | None:intergenic | 35.0% | |
| TAATATCCTGCATGAAGTCA+TGG | - | chr7_3:24437632-24437651 | None:intergenic | 35.0% | |
| TTGAAAGAAAATGTAGGTGC+TGG | + | chr7_3:24437726-24437745 | Msa1098060:intron | 35.0% | |
| TAAGGATGCTGACGTAATTT+GGG | + | chr7_3:24437755-24437774 | Msa1098060:intron | 35.0% | |
| !! | ATTCAAAAGGTGCCCTAATA+AGG | - | chr7_3:24437909-24437928 | None:intergenic | 35.0% |
| !! | TATTAGGGCACCTTTTGAAT+TGG | + | chr7_3:24437909-24437928 | Msa1098060:intron | 35.0% |
| ! | ACCTTTTGAATTGGATGCTT+GGG | + | chr7_3:24437918-24437937 | Msa1098060:intron | 35.0% |
| TTGAGCTATTACCATTACCA+AGG | - | chr7_3:24437974-24437993 | None:intergenic | 35.0% | |
| !!! | CGTAGAACTTTTTAGGATAG+AGG | + | chr7_3:24438004-24438023 | Msa1098060:intron | 35.0% |
| !!! | GAACTTTTTAGGATAGAGGT+TGG | + | chr7_3:24438008-24438027 | Msa1098060:intron | 35.0% |
| AATCACATCTCAACATTGAG+AGG | - | chr7_3:24438035-24438054 | None:intergenic | 35.0% | |
| CAATAGATCTTGCAGCTTAA+AGG | + | chr7_3:24438175-24438194 | Msa1098060:intron | 35.0% | |
| TAAATCACCAAACTTGTCCT+TGG | + | chr7_3:24438281-24438300 | Msa1098060:intron | 35.0% | |
| ! | GCTTTTGTGGGCATTTTATA+TGG | - | chr7_3:24438618-24438637 | None:intergenic | 35.0% |
| AAGAAAATCAGCATCAGGAA+AGG | + | chr7_3:24438641-24438660 | Msa1098060:CDS | 35.0% | |
| !! | AAAGCATTGAGCTTCTCATT+AGG | + | chr7_3:24438693-24438712 | Msa1098060:CDS | 35.0% |
| GAAACTTCCTTTCCAAAGAT+TGG | + | chr7_3:24438715-24438734 | Msa1098060:CDS | 35.0% | |
| CAATTTCAGGAACCAATCTT+TGG | - | chr7_3:24438730-24438749 | None:intergenic | 35.0% | |
| TTGAAATCCTGAGCAATTTC+AGG | - | chr7_3:24435679-24435698 | None:intergenic | 35.0% | |
| ! | TCACGAACCAATCTTTGGAA+TGG | - | chr7_3:24435661-24435680 | None:intergenic | 40.0% |
| !! | ATTGGTTCGTGAAATTGCTC+AGG | + | chr7_3:24435669-24435688 | Msa1098060:intron | 40.0% |
| CAACTTGCAAGAAGAATCAG+AGG | + | chr7_3:24435835-24435854 | Msa1098060:intron | 40.0% | |
| AAGAAGAATCAGAGGCGAAA+GGG | + | chr7_3:24435843-24435862 | Msa1098060:intron | 40.0% | |
| !! | TGTTAAGGGTGCGTTTGTTT+TGG | + | chr7_3:24436032-24436051 | Msa1098060:intron | 40.0% |
| GCATGATATGAGACTGTCTT+GGG | + | chr7_3:24437069-24437088 | Msa1098060:intron | 40.0% | |
| CATGATATGAGACTGTCTTG+GGG | + | chr7_3:24437070-24437089 | Msa1098060:intron | 40.0% | |
| TTAGAGAAAAGTCATGGGTG+TGG | + | chr7_3:24437104-24437123 | Msa1098060:intron | 40.0% | |
| !!! | CGAGCATTGCCATTTTTTCA+CGG | + | chr7_3:24437147-24437166 | Msa1098060:intron | 40.0% |
| !! | GCTTTGTTGTTGTTGATGCA+TGG | + | chr7_3:24437207-24437226 | Msa1098060:intron | 40.0% |
| CATTGGTATGGACCGATAAT+GGG | - | chr7_3:24437273-24437292 | None:intergenic | 40.0% | |
| !! | ATTGCAGATCAGCATTGGTA+TGG | - | chr7_3:24437285-24437304 | None:intergenic | 40.0% |
| CCTGTTAATTAGTGCATAGC+AGG | - | chr7_3:24437424-24437443 | None:intergenic | 40.0% | |
| CCTGCTATGCACTAATTAAC+AGG | + | chr7_3:24437421-24437440 | Msa1098060:intron | 40.0% | |
| !! | CATAACAATGATTTGGTGGC+TGG | - | chr7_3:24437685-24437704 | None:intergenic | 40.0% |
| TCTTTCAACCATTTCAGAGG+AGG | - | chr7_3:24437714-24437733 | None:intergenic | 40.0% | |
| CTAAGGATGCTGACGTAATT+TGG | + | chr7_3:24437754-24437773 | Msa1098060:intron | 40.0% | |
| AAGGATGCTGACGTAATTTG+GGG | + | chr7_3:24437756-24437775 | Msa1098060:intron | 40.0% | |
| CATAAATCACTTCTTCGCTG+TGG | - | chr7_3:24437797-24437816 | None:intergenic | 40.0% | |
| !! | TGTTTTGCAGCTAAGGTGTT+AGG | + | chr7_3:24437847-24437866 | Msa1098060:intron | 40.0% |
| ! | CACCTTTTGAATTGGATGCT+TGG | + | chr7_3:24437917-24437936 | Msa1098060:intron | 40.0% |
| ! | CCTTTTGAATTGGATGCTTG+GGG | + | chr7_3:24437919-24437938 | Msa1098060:intron | 40.0% |
| ! | CTTCTGCCGTAGAACTTTTT+AGG | + | chr7_3:24437997-24438016 | Msa1098060:intron | 40.0% |
| GTAACGCTTACTTCTCTAGA+TGG | + | chr7_3:24438099-24438118 | Msa1098060:intron | 40.0% | |
| AAGCTGCAAGATCTATTGTG+TGG | - | chr7_3:24438173-24438192 | None:intergenic | 40.0% | |
| GATTCTCGATAGCTTAATGG+TGG | + | chr7_3:24438256-24438275 | Msa1098060:intron | 40.0% | |
| AACAAGCGTTAACAGAAGGA+TGG | - | chr7_3:24438365-24438384 | None:intergenic | 40.0% | |
| ACTCAACAAGCGTTAACAGA+AGG | - | chr7_3:24438369-24438388 | None:intergenic | 40.0% | |
| ! | CAATTTGGATAGTCGATTCC+AGG | - | chr7_3:24438584-24438603 | None:intergenic | 40.0% |
| ! | GATTTTCTTGCGGCTTTTGT+GGG | - | chr7_3:24438630-24438649 | None:intergenic | 40.0% |
| ! | TGATTTTCTTGCGGCTTTTG+TGG | - | chr7_3:24438631-24438650 | None:intergenic | 40.0% |
| !!! | TCCTGATGCTGATTTTCTTG+CGG | - | chr7_3:24438640-24438659 | None:intergenic | 40.0% |
| ! | TCAGGAACCAATCTTTGGAA+AGG | - | chr7_3:24438725-24438744 | None:intergenic | 40.0% |
| ! | ATTGGTTCCTGAAATTGCTC+AGG | + | chr7_3:24438733-24438752 | Msa1098060:CDS | 40.0% |
| CTCTTAGCATGAATAGCACA+AGG | - | chr7_3:24435790-24435809 | None:intergenic | 40.0% | |
| GAGAGTTACCATAATGCCTA+AGG | + | chr7_3:24438869-24438888 | Msa1098060:CDS | 40.0% | |
| ! | GGATTTTCGCGCTGTTTGTT+TGG | - | chr7_3:24435473-24435492 | None:intergenic | 45.0% |
| !! | TGATTTTCTTGCGGCTTTGG+TGG | - | chr7_3:24435527-24435546 | None:intergenic | 45.0% |
| !! | AGCTGATTTTCTTGCGGCTT+TGG | - | chr7_3:24435530-24435549 | None:intergenic | 45.0% |
| !! | TGCAGGAGCTGATTTTCTTG+CGG | - | chr7_3:24435536-24435555 | None:intergenic | 45.0% |
| AGAAAATCAGCTCCTGCAAC+CGG | + | chr7_3:24435538-24435557 | Msa1098060:CDS | 45.0% | |
| GCTGCTGAATCGTATCTTGT+TGG | + | chr7_3:24435745-24435764 | Msa1098060:CDS | 45.0% | |
| CAAGAAGAATCAGAGGCGAA+AGG | + | chr7_3:24435842-24435861 | Msa1098060:intron | 45.0% | |
| GGCATGATATGAGACTGTCT+TGG | + | chr7_3:24437068-24437087 | Msa1098060:intron | 45.0% | |
| ATGGGTGTGGATCTTAGTTC+TGG | + | chr7_3:24437117-24437136 | Msa1098060:intron | 45.0% | |
| ! | AAAGCCTTTTCCCACTACGT+GGG | - | chr7_3:24437192-24437211 | None:intergenic | 45.0% |
| !! | GTATGGACCGATAATGGGTA+TGG | - | chr7_3:24437268-24437287 | None:intergenic | 45.0% |
| ! | GCATTGGTATGGACCGATAA+TGG | - | chr7_3:24437274-24437293 | None:intergenic | 45.0% |
| ! | TGTAAGAGCCTCCTCTGAAA+TGG | + | chr7_3:24437703-24437722 | Msa1098060:intron | 45.0% |
| !! | TGTAGGTGCTGGATTTGCTA+AGG | + | chr7_3:24437737-24437756 | Msa1098060:intron | 45.0% |
| CCCCAAGCATCCAATTCAAA+AGG | - | chr7_3:24437922-24437941 | None:intergenic | 45.0% | |
| CTCAGTTAAGTGGCATCGTT+TGG | + | chr7_3:24437948-24437967 | Msa1098060:intron | 45.0% | |
| TACGAAGCCAAGGACAAGTT+TGG | - | chr7_3:24438291-24438310 | None:intergenic | 45.0% | |
| AAACTTGTCCTTGGCTTCGT+AGG | + | chr7_3:24438290-24438309 | Msa1098060:intron | 45.0% | |
| TATAGGGAGCGAATTGACGA+TGG | - | chr7_3:24438401-24438420 | None:intergenic | 45.0% | |
| !! | AAACAGCGCTGCTCTGAAAT+TGG | - | chr7_3:24438775-24438794 | None:intergenic | 45.0% |
| TTCAGCGACTTCTTGAAGAG+TGG | - | chr7_3:24438798-24438817 | None:intergenic | 45.0% | |
| ! | CGAGCGAGTTGAATATCCTT+AGG | - | chr7_3:24438888-24438907 | None:intergenic | 45.0% |
| CAAACAGCGCGAAAATCCAC+CGG | + | chr7_3:24435475-24435494 | Msa1098060:CDS | 50.0% | |
| CGGTGCTCTTCTGATACTTG+CGG | - | chr7_3:24435618-24435637 | None:intergenic | 50.0% | |
| !! | AGAGCACCGAGCTTCTCATT+AGG | + | chr7_3:24435629-24435648 | Msa1098060:CDS | 50.0% |
| TGAATCCATACCCCACGTAG+TGG | + | chr7_3:24437178-24437197 | Msa1098060:intron | 50.0% | |
| GAATCCATACCCCACGTAGT+GGG | + | chr7_3:24437179-24437198 | Msa1098060:intron | 50.0% | |
| ! | TTTTCCCACTACGTGGGGTA+TGG | - | chr7_3:24437186-24437205 | None:intergenic | 50.0% |
| ! | ATACCCCACGTAGTGGGAAA+AGG | + | chr7_3:24437185-24437204 | Msa1098060:intron | 50.0% |
| ! | AAGCCTTTTCCCACTACGTG+GGG | - | chr7_3:24437191-24437210 | None:intergenic | 50.0% |
| ! | CAAAGCCTTTTCCCACTACG+TGG | - | chr7_3:24437193-24437212 | None:intergenic | 50.0% |
| ATCGAAAAAAGGAGGGGCTC+GGG | - | chr7_3:24437510-24437529 | None:intergenic | 50.0% | |
| CATCGAAAAAAGGAGGGGCT+CGG | - | chr7_3:24437511-24437530 | None:intergenic | 50.0% | |
| TTCATCTCCTGCCCAAGAAC+CGG | + | chr7_3:24437653-24437672 | Msa1098060:intron | 50.0% | |
| !! | CAATGATTTGGTGGCTGGCT+TGG | - | chr7_3:24437680-24437699 | None:intergenic | 50.0% |
| ! | TGCTGACGTAATTTGGGGTC+TGG | + | chr7_3:24437761-24437780 | Msa1098060:intron | 50.0% |
| !! | TTAAAGCATTGGCGACCCGA+AGG | - | chr7_3:24437885-24437904 | None:intergenic | 50.0% |
| GAATTGGATGCTTGGGGAGT+TGG | + | chr7_3:24437925-24437944 | Msa1098060:intron | 50.0% | |
| TAAGTGGCATCGTTTGGCCT+TGG | + | chr7_3:24437954-24437973 | Msa1098060:intron | 50.0% | |
| !! | GCATCGTTTGGCCTTGGTAA+TGG | + | chr7_3:24437960-24437979 | Msa1098060:intron | 50.0% |
| GGAGCGAATTGACGATGGAA+CGG | - | chr7_3:24438396-24438415 | None:intergenic | 50.0% | |
| ! | ATAGTCGATTCCAGGACTGC+TGG | - | chr7_3:24438576-24438595 | None:intergenic | 50.0% |
| GCCGCAAGAAAATCAGCATC+AGG | + | chr7_3:24438636-24438655 | Msa1098060:intron | 50.0% | |
| ! | TGGTGGCGAGTTGTTTCCGT+GGG | - | chr7_3:24435510-24435529 | None:intergenic | 55.0% |
| !! | TTGGTGGCGAGTTGTTTCCG+TGG | - | chr7_3:24435511-24435530 | None:intergenic | 55.0% |
| AAATCAGCTCCTGCAACCGG+AGG | + | chr7_3:24435541-24435560 | Msa1098060:CDS | 55.0% | |
| TTCTTCACTCCTCCGGTTGC+AGG | - | chr7_3:24435553-24435572 | None:intergenic | 55.0% | |
| GTGTGGCTTCTTCACTCCTC+CGG | - | chr7_3:24435560-24435579 | None:intergenic | 55.0% | |
| AAGCCACACAGATTCCGTCC+AGG | + | chr7_3:24435571-24435590 | Msa1098060:CDS | 55.0% | |
| GTTCCTGGACGGAATCTGTG+TGG | - | chr7_3:24435577-24435596 | None:intergenic | 55.0% | |
| GCTCGGGTACCCTTTGATAG+AGG | - | chr7_3:24437494-24437513 | None:intergenic | 55.0% | |
| !! | ATTTGGTGGCTGGCTTGGAC+CGG | - | chr7_3:24437675-24437694 | None:intergenic | 55.0% |
| ! | GGGGAGTTGGCTCAGTTAAG+TGG | + | chr7_3:24437938-24437957 | Msa1098060:intron | 55.0% |
| GACTGCTATACCAGCAGTCC+TGG | + | chr7_3:24438563-24438582 | Msa1098060:intron | 55.0% | |
| GTCGCTGAAGCGTGTCTTGT+TGG | + | chr7_3:24438809-24438828 | Msa1098060:CDS | 55.0% | |
| ACAGCGCGAAAATCCACCGG+CGG | + | chr7_3:24435478-24435497 | Msa1098060:CDS | 60.0% | |
| ! | TTTCCGTGGGGCTTTTCCGC+CGG | - | chr7_3:24435497-24435516 | None:intergenic | 60.0% |
| ! | GGTGGCGAGTTGTTTCCGTG+GGG | - | chr7_3:24435509-24435528 | None:intergenic | 60.0% |
| GAAGCGCGACTGTTCCTGGA+CGG | - | chr7_3:24435588-24435607 | None:intergenic | 60.0% | |
| TCACGAAGCGCGACTGTTCC+TGG | - | chr7_3:24435592-24435611 | None:intergenic | 60.0% | |
| GGCTGCCCATGACTTCATGC+AGG | + | chr7_3:24437623-24437642 | Msa1098060:intron | 60.0% | |
| !! | GCTGGCTTGGACCGGTTCTT+GGG | - | chr7_3:24437667-24437686 | None:intergenic | 60.0% |
| ! | CTAAGGTGTTAGGCCTGCGC+TGG | + | chr7_3:24437857-24437876 | Msa1098060:intron | 60.0% |
| !! | GAGAGCGTCCTACGAAGCCA+AGG | - | chr7_3:24438301-24438320 | None:intergenic | 60.0% |
| ! | GCTTGGACCGGTTCTTGGGC+AGG | - | chr7_3:24437663-24437682 | None:intergenic | 65.0% |
| !! | GGCTGGCTTGGACCGGTTCT+TGG | - | chr7_3:24437668-24437687 | None:intergenic | 65.0% |
| TAGGCCTGCGCTGGAGCCTT+CGG | + | chr7_3:24437866-24437885 | Msa1098060:intron | 65.0% | |
| CCACCGGCGGAAAAGCCCCA+CGG | + | chr7_3:24435491-24435510 | Msa1098060:CDS | 70.0% | |
| AGGCCTGCGCTGGAGCCTTC+GGG | + | chr7_3:24437867-24437886 | Msa1098060:intron | 70.0% | |
| ! | CCGTGGGGCTTTTCCGCCGG+TGG | - | chr7_3:24435494-24435513 | None:intergenic | 75.0% |
| CGACCCGAAGGCTCCAGCGC+AGG | - | chr7_3:24437873-24437892 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 24435460 | 24438920 | 24435460 | ID=Msa1098060;Name=Msa1098060 |
| chr7_3 | mRNA | 24435460 | 24438920 | 24435460 | ID=Msa1098060-mRNA-1;Parent=Msa1098060;Name=Msa1098060-mRNA-1;_AED=0.22;_eAED=0.24;_QI=0|0|0|1|0|0.33|3|0|190 |
| chr7_3 | exon | 24435460 | 24435672 | 24435460 | ID=Msa1098060-mRNA-1:exon:5298;Parent=Msa1098060-mRNA-1 |
| chr7_3 | exon | 24435691 | 24435766 | 24435691 | ID=Msa1098060-mRNA-1:exon:5299;Parent=Msa1098060-mRNA-1 |
| chr7_3 | exon | 24438637 | 24438920 | 24438637 | ID=Msa1098060-mRNA-1:exon:5300;Parent=Msa1098060-mRNA-1 |
| chr7_3 | CDS | 24435460 | 24435672 | 24435460 | ID=Msa1098060-mRNA-1:cds;Parent=Msa1098060-mRNA-1 |
| chr7_3 | CDS | 24435691 | 24435766 | 24435691 | ID=Msa1098060-mRNA-1:cds;Parent=Msa1098060-mRNA-1 |
| chr7_3 | CDS | 24438637 | 24438920 | 24438637 | ID=Msa1098060-mRNA-1:cds;Parent=Msa1098060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
