Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506540 | XP_003600546.1 | 84.758 | 433 | 22 | 3 | 1 | 389 | 1 | 433 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506540 | sp|P20664|PRI1_MOUSE | 39.089 | 417 | 190 | 13 | 13 | 379 | 12 | 414 | 3.69e-88 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506540 | G7IV46 | 84.758 | 433 | 22 | 3 | 1 | 389 | 1 | 433 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0506540 | 0.817848 | 2.664993e-52 | -8.615850e-47 |
| Msa0015570 | Msa0506540 | 0.839180 | 1.848100e-57 | -8.615850e-47 |
| Msa0016530 | Msa0506540 | 0.834059 | 3.731132e-56 | -8.615850e-47 |
| Msa0018920 | Msa0506540 | 0.829750 | 4.323033e-55 | -8.615850e-47 |
| Msa0020540 | Msa0506540 | 0.839947 | 1.168358e-57 | -8.615850e-47 |
| Msa0027800 | Msa0506540 | 0.809839 | 1.551409e-50 | -8.615850e-47 |
| Msa0030070 | Msa0506540 | 0.901222 | 3.332996e-78 | -8.615850e-47 |
| Msa0030690 | Msa0506540 | 0.826973 | 2.021937e-54 | -8.615850e-47 |
| Msa0032230 | Msa0506540 | 0.827165 | 1.818951e-54 | -8.615850e-47 |
| Msa0032980 | Msa0506540 | 0.843898 | 1.055279e-58 | -8.615850e-47 |
| Msa0034830 | Msa0506540 | 0.821856 | 3.231374e-53 | -8.615850e-47 |
| Msa0040640 | Msa0506540 | 0.847576 | 1.060012e-59 | -8.615850e-47 |
| Msa0050150 | Msa0506540 | 0.836682 | 8.108219e-57 | -8.615850e-47 |
| Msa0050530 | Msa0506540 | 0.841899 | 3.590661e-58 | -8.615850e-47 |
| Msa0062340 | Msa0506540 | 0.812858 | 3.431896e-51 | -8.615850e-47 |
| Msa0067060 | Msa0506540 | 0.804138 | 2.493990e-49 | -8.615850e-47 |
| Msa0067380 | Msa0506540 | 0.809431 | 1.898949e-50 | -8.615850e-47 |
| Msa0068150 | Msa0506540 | 0.806052 | 9.920161e-50 | -8.615850e-47 |
| Msa0074360 | Msa0506540 | 0.805259 | 1.455625e-49 | -8.615850e-47 |
| Msa0075530 | Msa0506540 | 0.822601 | 2.171388e-53 | -8.615850e-47 |
| Msa0078130 | Msa0506540 | 0.844581 | 6.919699e-59 | -8.615850e-47 |
| Msa0090440 | Msa0506540 | 0.840214 | 9.950912e-58 | -8.615850e-47 |
| Msa0091350 | Msa0506540 | 0.860245 | 2.363278e-63 | -8.615850e-47 |
| Msa0098410 | Msa0506540 | 0.800215 | 1.600387e-48 | -8.615850e-47 |
| Msa0100600 | Msa0506540 | 0.852285 | 5.103399e-61 | -8.615850e-47 |
| Msa0100890 | Msa0506540 | 0.827410 | 1.588840e-54 | -8.615850e-47 |
| Msa0106630 | Msa0506540 | 0.847978 | 8.211431e-60 | -8.615850e-47 |
| Msa0109730 | Msa0506540 | 0.815835 | 7.543133e-52 | -8.615850e-47 |
| Msa0110200 | Msa0506540 | 0.802201 | 6.275866e-49 | -8.615850e-47 |
| Msa0112670 | Msa0506540 | 0.812718 | 3.681824e-51 | -8.615850e-47 |
| Msa0123320 | Msa0506540 | 0.826185 | 3.116639e-54 | -8.615850e-47 |
| Msa0125590 | Msa0506540 | 0.903342 | 3.829445e-79 | -8.615850e-47 |
| Msa0127270 | Msa0506540 | 0.822403 | 2.413611e-53 | -8.615850e-47 |
| Msa0127340 | Msa0506540 | 0.858132 | 1.015819e-62 | -8.615850e-47 |
| Msa0127680 | Msa0506540 | 0.824996 | 5.963982e-54 | -8.615850e-47 |
| Msa0129960 | Msa0506540 | 0.803462 | 3.445701e-49 | -8.615850e-47 |
| Msa0140200 | Msa0506540 | 0.805665 | 1.196278e-49 | -8.615850e-47 |
| Msa0140380 | Msa0506540 | 0.817650 | 2.954072e-52 | -8.615850e-47 |
| Msa0153210 | Msa0506540 | 0.847947 | 8.375183e-60 | -8.615850e-47 |
| Msa0156050 | Msa0506540 | 0.853016 | 3.156400e-61 | -8.615850e-47 |
| Msa0156090 | Msa0506540 | 0.854366 | 1.291506e-61 | -8.615850e-47 |
| Msa0156510 | Msa0506540 | 0.802258 | 6.109571e-49 | -8.615850e-47 |
| Msa0159590 | Msa0506540 | 0.848948 | 4.424682e-60 | -8.615850e-47 |
| Msa0159620 | Msa0506540 | 0.835620 | 1.508940e-56 | -8.615850e-47 |
| Msa0161890 | Msa0506540 | 0.807574 | 4.730772e-50 | -8.615850e-47 |
| Msa0165830 | Msa0506540 | 0.870445 | 1.451566e-66 | -8.615850e-47 |
| Msa0168050 | Msa0506540 | 0.823333 | 1.466006e-53 | -8.615850e-47 |
| Msa0168380 | Msa0506540 | 0.851945 | 6.375931e-61 | -8.615850e-47 |
| Msa0170070 | Msa0506540 | 0.865961 | 4.038432e-65 | -8.615850e-47 |
| Msa0172510 | Msa0506540 | 0.818503 | 1.894748e-52 | -8.615850e-47 |
| Msa0184700 | Msa0506540 | 0.841748 | 3.936526e-58 | -8.615850e-47 |
| Msa0186180 | Msa0506540 | 0.859060 | 5.371133e-63 | -8.615850e-47 |
| Msa0186360 | Msa0506540 | 0.832015 | 1.202894e-55 | -8.615850e-47 |
| Msa0190730 | Msa0506540 | 0.800179 | 1.627336e-48 | -8.615850e-47 |
| Msa0194630 | Msa0506540 | 0.831253 | 1.853542e-55 | -8.615850e-47 |
| Msa0204970 | Msa0506540 | 0.846677 | 1.868715e-59 | -8.615850e-47 |
| Msa0225800 | Msa0506540 | 0.813696 | 2.245649e-51 | -8.615850e-47 |
| Msa0232760 | Msa0506540 | 0.801743 | 7.797258e-49 | -8.615850e-47 |
| Msa0233020 | Msa0506540 | 0.817523 | 3.156033e-52 | -8.615850e-47 |
| Msa0236820 | Msa0506540 | 0.830080 | 3.591203e-55 | -8.615850e-47 |
| Msa0364680 | Msa0506540 | 0.860379 | 2.152354e-63 | -8.615850e-47 |
| Msa0367150 | Msa0506540 | 0.867538 | 1.271600e-65 | -8.615850e-47 |
| Msa0373170 | Msa0506540 | 0.888747 | 4.486939e-73 | -8.615850e-47 |
| Msa0373500 | Msa0506540 | 0.830023 | 3.708111e-55 | -8.615850e-47 |
| Msa0373590 | Msa0506540 | 0.829990 | 3.777384e-55 | -8.615850e-47 |
| Msa0380490 | Msa0506540 | 0.825670 | 4.130712e-54 | -8.615850e-47 |
| Msa0380710 | Msa0506540 | 0.815876 | 7.385354e-52 | -8.615850e-47 |
| Msa0382230 | Msa0506540 | 0.879808 | 9.212048e-70 | -8.615850e-47 |
| Msa0383000 | Msa0506540 | 0.817947 | 2.532017e-52 | -8.615850e-47 |
| Msa0383940 | Msa0506540 | 0.802566 | 5.278665e-49 | -8.615850e-47 |
| Msa0388250 | Msa0506540 | 0.821273 | 4.406969e-53 | -8.615850e-47 |
| Msa0388620 | Msa0506540 | 0.825696 | 4.071638e-54 | -8.615850e-47 |
| Msa0404770 | Msa0506540 | 0.835267 | 1.853524e-56 | -8.615850e-47 |
| Msa0412130 | Msa0506540 | 0.863251 | 2.845109e-64 | -8.615850e-47 |
| Msa0414880 | Msa0506540 | 0.816923 | 4.304834e-52 | -8.615850e-47 |
| Msa0415820 | Msa0506540 | 0.840078 | 1.080024e-57 | -8.615850e-47 |
| Msa0416160 | Msa0506540 | 0.818615 | 1.787526e-52 | -8.615850e-47 |
| Msa0416210 | Msa0506540 | 0.834753 | 2.498344e-56 | -8.615850e-47 |
| Msa0420430 | Msa0506540 | 0.815581 | 8.589097e-52 | -8.615850e-47 |
| Msa0420670 | Msa0506540 | 0.837486 | 5.053872e-57 | -8.615850e-47 |
| Msa0421130 | Msa0506540 | 0.825272 | 5.130301e-54 | -8.615850e-47 |
| Msa0421750 | Msa0506540 | 0.862476 | 4.934432e-64 | -8.615850e-47 |
| Msa0429970 | Msa0506540 | 0.829271 | 5.650107e-55 | -8.615850e-47 |
| Msa0430000 | Msa0506540 | 0.815555 | 8.706368e-52 | -8.615850e-47 |
| Msa0431740 | Msa0506540 | 0.814904 | 1.214955e-51 | -8.615850e-47 |
| Msa0432010 | Msa0506540 | 0.819050 | 1.423619e-52 | -8.615850e-47 |
| Msa0433150 | Msa0506540 | 0.804767 | 1.844538e-49 | -8.615850e-47 |
| Msa0433630 | Msa0506540 | 0.846111 | 2.666668e-59 | -8.615850e-47 |
| Msa0433760 | Msa0506540 | 0.862715 | 4.164239e-64 | -8.615850e-47 |
| Msa0434360 | Msa0506540 | 0.817315 | 3.514089e-52 | -8.615850e-47 |
| Msa0456670 | Msa0506540 | 0.852264 | 5.172586e-61 | -8.615850e-47 |
| Msa0459740 | Msa0506540 | 0.853007 | 3.175769e-61 | -8.615850e-47 |
| Msa0461550 | Msa0506540 | 0.805113 | 1.561665e-49 | -8.615850e-47 |
| Msa0466520 | Msa0506540 | 0.833227 | 6.020021e-56 | -8.615850e-47 |
| Msa0466880 | Msa0506540 | 0.834243 | 3.354890e-56 | -8.615850e-47 |
| Msa0467690 | Msa0506540 | 0.886592 | 2.990844e-72 | -8.615850e-47 |
| Msa0468390 | Msa0506540 | 0.813076 | 3.073922e-51 | -8.615850e-47 |
| Msa0468620 | Msa0506540 | 0.861402 | 1.052553e-63 | -8.615850e-47 |
| Msa0468700 | Msa0506540 | 0.822693 | 2.066721e-53 | -8.615850e-47 |
| Msa0477630 | Msa0506540 | 0.867977 | 9.188666e-66 | -8.615850e-47 |
| Msa0478140 | Msa0506540 | 0.854617 | 1.092229e-61 | -8.615850e-47 |
| Msa0478200 | Msa0506540 | 0.847931 | 8.462199e-60 | -8.615850e-47 |
| Msa0480730 | Msa0506540 | 0.825842 | 3.759394e-54 | -8.615850e-47 |
| Msa0481890 | Msa0506540 | 0.802036 | 6.787314e-49 | -8.615850e-47 |
| Msa0249870 | Msa0506540 | 0.848398 | 6.287581e-60 | -8.615850e-47 |
| Msa0265310 | Msa0506540 | 0.819850 | 9.352998e-53 | -8.615850e-47 |
| Msa0272260 | Msa0506540 | 0.813005 | 3.185767e-51 | -8.615850e-47 |
| Msa0281540 | Msa0506540 | 0.848736 | 5.069702e-60 | -8.615850e-47 |
| Msa0288400 | Msa0506540 | 0.809560 | 1.781487e-50 | -8.615850e-47 |
| Msa0314870 | Msa0506540 | 0.843191 | 1.631190e-58 | -8.615850e-47 |
| Msa0320250 | Msa0506540 | 0.819701 | 1.011286e-52 | -8.615850e-47 |
| Msa0320270 | Msa0506540 | 0.816560 | 5.192098e-52 | -8.615850e-47 |
| Msa0320290 | Msa0506540 | 0.825178 | 5.401923e-54 | -8.615850e-47 |
| Msa0320580 | Msa0506540 | 0.848723 | 5.109437e-60 | -8.615850e-47 |
| Msa0342220 | Msa0506540 | 0.816796 | 4.596094e-52 | -8.615850e-47 |
| Msa0344110 | Msa0506540 | 0.849987 | 2.272450e-60 | -8.615850e-47 |
| Msa0358060 | Msa0506540 | 0.800251 | 1.573546e-48 | -8.615850e-47 |
| Msa0500570 | Msa0506540 | 0.835981 | 1.222391e-56 | -8.615850e-47 |
| Msa0500740 | Msa0506540 | 0.801979 | 6.973243e-49 | -8.615850e-47 |
| Msa0503990 | Msa0506540 | 0.849578 | 2.955837e-60 | -8.615850e-47 |
| Msa0506540 | Msa0506880 | 0.826948 | 2.049648e-54 | -8.615850e-47 |
| Msa0506540 | Msa0507020 | 0.814461 | 1.522846e-51 | -8.615850e-47 |
| Msa0506540 | Msa0507810 | 0.839203 | 1.823826e-57 | -8.615850e-47 |
| Msa0506540 | Msa0507820 | 0.834352 | 3.150648e-56 | -8.615850e-47 |
| Msa0506540 | Msa0507920 | 0.844464 | 7.437970e-59 | -8.615850e-47 |
| Msa0506540 | Msa0512530 | 0.841259 | 5.294660e-58 | -8.615850e-47 |
| Msa0506540 | Msa0513080 | 0.816328 | 5.852316e-52 | -8.615850e-47 |
| Msa0506540 | Msa0513560 | 0.820833 | 5.565324e-53 | -8.615850e-47 |
| Msa0506540 | Msa0513640 | 0.827295 | 1.693379e-54 | -8.615850e-47 |
| Msa0506540 | Msa0514020 | 0.885760 | 6.159338e-72 | -8.615850e-47 |
| Msa0506540 | Msa0514500 | 0.861931 | 7.250156e-64 | -8.615850e-47 |
| Msa0506540 | Msa0514580 | 0.810169 | 1.317438e-50 | -8.615850e-47 |
| Msa0506540 | Msa0518410 | 0.814282 | 1.668005e-51 | -8.615850e-47 |
| Msa0506540 | Msa0520680 | 0.876455 | 1.377337e-68 | -8.615850e-47 |
| Msa0506540 | Msa0520870 | 0.837947 | 3.847357e-57 | -8.615850e-47 |
| Msa0506540 | Msa0521510 | 0.822292 | 2.561073e-53 | -8.615850e-47 |
| Msa0506540 | Msa0521530 | 0.802734 | 4.873509e-49 | -8.615850e-47 |
| Msa0506540 | Msa0521680 | 0.858904 | 5.978600e-63 | -8.615850e-47 |
| Msa0506540 | Msa0523380 | 0.806840 | 6.765365e-50 | -8.615850e-47 |
| Msa0506540 | Msa0527850 | 0.888150 | 7.617701e-73 | -8.615850e-47 |
| Msa0506540 | Msa0531960 | 0.817357 | 3.439645e-52 | -8.615850e-47 |
| Msa0506540 | Msa0541740 | 0.882660 | 8.643291e-71 | -8.615850e-47 |
| Msa0506540 | Msa0544410 | 0.857417 | 1.655166e-62 | -8.615850e-47 |
| Msa0506540 | Msa0544430 | 0.820217 | 7.709388e-53 | -8.615850e-47 |
| Msa0506540 | Msa0548000 | 0.823872 | 1.096465e-53 | -8.615850e-47 |
| Msa0506540 | Msa0550590 | 0.821904 | 3.150373e-53 | -8.615850e-47 |
| Msa0506540 | Msa0553750 | 0.811703 | 6.132599e-51 | -8.615850e-47 |
| Msa0506540 | Msa0554300 | 0.864705 | 1.003089e-64 | -8.615850e-47 |
| Msa0506540 | Msa0559100 | 0.812931 | 3.307731e-51 | -8.615850e-47 |
| Msa0506540 | Msa0561560 | 0.859223 | 4.799107e-63 | -8.615850e-47 |
| Msa0506540 | Msa0563900 | 0.809385 | 1.942230e-50 | -8.615850e-47 |
| Msa0506540 | Msa0564980 | 0.836684 | 8.098777e-57 | -8.615850e-47 |
| Msa0506540 | Msa0568710 | 0.801731 | 7.842024e-49 | -8.615850e-47 |
| Msa0506540 | Msa0572830 | 0.881429 | 2.418975e-70 | -8.615850e-47 |
| Msa0506540 | Msa0577280 | 0.824621 | 7.310665e-54 | -8.615850e-47 |
| Msa0506540 | Msa0577330 | 0.827609 | 1.423532e-54 | -8.615850e-47 |
| Msa0506540 | Msa0582460 | 0.878556 | 2.552792e-69 | -8.615850e-47 |
| Msa0506540 | Msa0584530 | 0.862174 | 6.107747e-64 | -8.615850e-47 |
| Msa0506540 | Msa0586200 | 0.884589 | 1.685209e-71 | -8.615850e-47 |
| Msa0506540 | Msa0603410 | 0.800099 | 1.689348e-48 | -8.615850e-47 |
| Msa0506540 | Msa0607800 | 0.815283 | 1.000976e-51 | -8.615850e-47 |
| Msa0506540 | Msa0608350 | 0.842970 | 1.868001e-58 | -8.615850e-47 |
| Msa0506540 | Msa0612410 | 0.810667 | 1.028643e-50 | -8.615850e-47 |
| Msa0506540 | Msa0612520 | 0.801724 | 7.867734e-49 | -8.615850e-47 |
| Msa0506540 | Msa0613580 | 0.807794 | 4.246913e-50 | -8.615850e-47 |
| Msa0506540 | Msa0613630 | 0.834088 | 3.669302e-56 | -8.615850e-47 |
| Msa0506540 | Msa0615630 | 0.840257 | 9.693639e-58 | -8.615850e-47 |
| Msa0506540 | Msa0618840 | 0.805675 | 1.190664e-49 | -8.615850e-47 |
| Msa0506540 | Msa0618990 | 0.817810 | 2.718013e-52 | -8.615850e-47 |
| Msa0506540 | Msa0620500 | 0.858908 | 5.961259e-63 | -8.615850e-47 |
| Msa0506540 | Msa0620510 | 0.831770 | 1.382984e-55 | -8.615850e-47 |
| Msa0506540 | Msa0621710 | 0.827715 | 1.342311e-54 | -8.615850e-47 |
| Msa0506540 | Msa0622920 | 0.828699 | 7.775470e-55 | -8.615850e-47 |
| Msa0506540 | Msa0625620 | 0.867409 | 1.397583e-65 | -8.615850e-47 |
| Msa0506540 | Msa0640800 | 0.876904 | 9.629602e-69 | -8.615850e-47 |
| Msa0506540 | Msa0645340 | 0.800288 | 1.546470e-48 | -8.615850e-47 |
| Msa0506540 | Msa0647050 | 0.815671 | 8.202763e-52 | -8.615850e-47 |
| Msa0506540 | Msa0647440 | 0.861625 | 8.992768e-64 | -8.615850e-47 |
| Msa0506540 | Msa0648040 | 0.821441 | 4.031945e-53 | -8.615850e-47 |
| Msa0506540 | Msa0648760 | 0.868299 | 7.238616e-66 | -8.615850e-47 |
| Msa0506540 | Msa0653160 | 0.806671 | 7.345658e-50 | -8.615850e-47 |
| Msa0506540 | Msa0654740 | 0.841803 | 3.807076e-58 | -8.615850e-47 |
| Msa0506540 | Msa0657210 | 0.870438 | 1.459195e-66 | -8.615850e-47 |
| Msa0506540 | Msa0659200 | 0.836250 | 1.044512e-56 | -8.615850e-47 |
| Msa0506540 | Msa0663290 | 0.861930 | 7.254959e-64 | -8.615850e-47 |
| Msa0506540 | Msa0664070 | 0.867575 | 1.236646e-65 | -8.615850e-47 |
| Msa0506540 | Msa0668900 | 0.805525 | 1.279871e-49 | -8.615850e-47 |
| Msa0506540 | Msa0688620 | 0.862802 | 3.915807e-64 | -8.615850e-47 |
| Msa0506540 | Msa0690320 | 0.849441 | 3.228226e-60 | -8.615850e-47 |
| Msa0506540 | Msa0690740 | 0.818980 | 1.476718e-52 | -8.615850e-47 |
| Msa0506540 | Msa0691270 | 0.845978 | 2.897824e-59 | -8.615850e-47 |
| Msa0506540 | Msa0698730 | 0.826189 | 3.109292e-54 | -8.615850e-47 |
| Msa0506540 | Msa0701250 | 0.880795 | 4.088140e-70 | -8.615850e-47 |
| Msa0506540 | Msa0705180 | 0.835800 | 1.358691e-56 | -8.615850e-47 |
| Msa0506540 | Msa0707260 | 0.865804 | 4.528081e-65 | -8.615850e-47 |
| Msa0506540 | Msa0708980 | 0.828408 | 9.140588e-55 | -8.615850e-47 |
| Msa0506540 | Msa0714520 | 0.822184 | 2.713013e-53 | -8.615850e-47 |
| Msa0506540 | Msa0717900 | 0.878708 | 2.256981e-69 | -8.615850e-47 |
| Msa0506540 | Msa0718040 | 0.810534 | 1.099078e-50 | -8.615850e-47 |
| Msa0506540 | Msa0720280 | 0.875388 | 3.203973e-68 | -8.615850e-47 |
| Msa0506540 | Msa0737130 | 0.817618 | 3.002898e-52 | -8.615850e-47 |
| Msa0506540 | Msa0749190 | 0.861334 | 1.103894e-63 | -8.615850e-47 |
| Msa0506540 | Msa0750520 | 0.864972 | 8.274447e-65 | -8.615850e-47 |
| Msa0506540 | Msa0751720 | 0.808566 | 2.908078e-50 | -8.615850e-47 |
| Msa0506540 | Msa0758590 | 0.819414 | 1.176007e-52 | -8.615850e-47 |
| Msa0506540 | Msa0778600 | 0.834501 | 2.890313e-56 | -8.615850e-47 |
| Msa0506540 | Msa0780910 | 0.808604 | 2.854864e-50 | -8.615850e-47 |
| Msa0506540 | Msa0800660 | 0.819857 | 9.316171e-53 | -8.615850e-47 |
| Msa0506540 | Msa0803140 | 0.870329 | 1.583833e-66 | -8.615850e-47 |
| Msa0506540 | Msa0811020 | 0.807911 | 4.010844e-50 | -8.615850e-47 |
| Msa0506540 | Msa0816080 | 0.865341 | 6.336141e-65 | -8.615850e-47 |
| Msa0506540 | Msa0816230 | 0.816460 | 5.466226e-52 | -8.615850e-47 |
| Msa0506540 | Msa0821160 | 0.833180 | 6.184337e-56 | -8.615850e-47 |
| Msa0506540 | Msa0821350 | 0.809131 | 2.201746e-50 | -8.615850e-47 |
| Msa0506540 | Msa0837680 | 0.869610 | 2.720806e-66 | -8.615850e-47 |
| Msa0506540 | Msa0841500 | 0.871546 | 6.294648e-67 | -8.615850e-47 |
| Msa0506540 | Msa0846900 | 0.819306 | 1.244752e-52 | -8.615850e-47 |
| Msa0506540 | Msa0851300 | 0.807447 | 5.032449e-50 | -8.615850e-47 |
| Msa0506540 | Msa0856610 | 0.809198 | 2.130114e-50 | -8.615850e-47 |
| Msa0506540 | Msa0861440 | 0.881389 | 2.499471e-70 | -8.615850e-47 |
| Msa0506540 | Msa0866530 | 0.819436 | 1.162585e-52 | -8.615850e-47 |
| Msa0506540 | Msa0879920 | 0.831576 | 1.543553e-55 | -8.615850e-47 |
| Msa0506540 | Msa0900090 | 0.856202 | 3.774267e-62 | -8.615850e-47 |
| Msa0506540 | Msa0900760 | 0.849686 | 2.757299e-60 | -8.615850e-47 |
| Msa0506540 | Msa0909760 | 0.851333 | 9.502256e-61 | -8.615850e-47 |
| Msa0506540 | Msa0926310 | 0.866573 | 2.582679e-65 | -8.615850e-47 |
| Msa0506540 | Msa0931310 | 0.818421 | 1.977643e-52 | -8.615850e-47 |
| Msa0506540 | Msa0931590 | 0.805077 | 1.588353e-49 | -8.615850e-47 |
| Msa0506540 | Msa0945900 | 0.801644 | 8.171271e-49 | -8.615850e-47 |
| Msa0506540 | Msa0955370 | 0.810230 | 1.277869e-50 | -8.615850e-47 |
| Msa0506540 | Msa0965470 | 0.810486 | 1.125512e-50 | -8.615850e-47 |
| Msa0506540 | Msa0966710 | 0.803880 | 2.822520e-49 | -8.615850e-47 |
| Msa0506540 | Msa0977340 | 0.809781 | 1.596850e-50 | -8.615850e-47 |
| Msa0506540 | Msa0978980 | 0.809305 | 2.020458e-50 | -8.615850e-47 |
| Msa0506540 | Msa0989370 | 0.806408 | 8.347744e-50 | -8.615850e-47 |
| Msa0506540 | Msa1000780 | 0.879078 | 1.671561e-69 | -8.615850e-47 |
| Msa0506540 | Msa1000970 | 0.800415 | 1.457133e-48 | -8.615850e-47 |
| Msa0506540 | Msa1002640 | 0.816687 | 4.862647e-52 | -8.615850e-47 |
| Msa0506540 | Msa1008670 | 0.852834 | 3.559245e-61 | -8.615850e-47 |
| Msa0506540 | Msa1008680 | 0.824579 | 7.477054e-54 | -8.615850e-47 |
| Msa0506540 | Msa1033920 | 0.819131 | 1.364123e-52 | -8.615850e-47 |
| Msa0506540 | Msa1034400 | 0.809161 | 2.169004e-50 | -8.615850e-47 |
| Msa0506540 | Msa1036090 | 0.815795 | 7.698265e-52 | -8.615850e-47 |
| Msa0506540 | Msa1041370 | 0.822914 | 1.835564e-53 | -8.615850e-47 |
| Msa0506540 | Msa1060900 | 0.817712 | 2.861135e-52 | -8.615850e-47 |
| Msa0506540 | Msa1071410 | 0.867189 | 1.644114e-65 | -8.615850e-47 |
| Msa0506540 | Msa1074150 | 0.826856 | 2.155800e-54 | -8.615850e-47 |
| Msa0506540 | Msa1076020 | 0.841990 | 3.398758e-58 | -8.615850e-47 |
| Msa0506540 | Msa1078860 | 0.856624 | 2.837437e-62 | -8.615850e-47 |
| Msa0506540 | Msa1078990 | 0.846471 | 2.128024e-59 | -8.615850e-47 |
| Msa0506540 | Msa1079640 | 0.805566 | 1.255162e-49 | -8.615850e-47 |
| Msa0506540 | Msa1081270 | 0.815193 | 1.047769e-51 | -8.615850e-47 |
| Msa0506540 | Msa1082380 | 0.850951 | 1.217824e-60 | -8.615850e-47 |
| Msa0506540 | Msa1098060 | 0.809813 | 1.571852e-50 | -8.615850e-47 |
| Msa0506540 | Msa1106220 | 0.823946 | 1.053360e-53 | -8.615850e-47 |
| Msa0506540 | Msa1114630 | 0.842143 | 3.095258e-58 | -8.615850e-47 |
| Msa0506540 | Msa1124470 | 0.810244 | 1.269569e-50 | -8.615850e-47 |
| Msa0506540 | Msa1125820 | 0.807022 | 6.191325e-50 | -8.615850e-47 |
| Msa0506540 | Msa1125990 | 0.800534 | 1.378047e-48 | -8.615850e-47 |
| Msa0506540 | Msa1126620 | 0.815051 | 1.126904e-51 | -8.615850e-47 |
| Msa0506540 | Msa1127280 | 0.844776 | 6.132425e-59 | -8.615850e-47 |
| Msa0506540 | Msa1139050 | 0.815920 | 7.220428e-52 | -8.615850e-47 |
| Msa0506540 | Msa1148630 | 0.820093 | 8.229050e-53 | -8.615850e-47 |
| Msa0506540 | Msa1159590 | 0.863527 | 2.335698e-64 | -8.615850e-47 |
| Msa0506540 | Msa1162880 | 0.841299 | 5.169392e-58 | -8.615850e-47 |
| Msa0506540 | Msa1163180 | 0.824645 | 7.213291e-54 | -8.615850e-47 |
| Msa0506540 | Msa1165480 | 0.841902 | 3.585064e-58 | -8.615850e-47 |
| Msa0506540 | Msa1169170 | 0.839675 | 1.374785e-57 | -8.615850e-47 |
| Msa0506540 | Msa1169690 | 0.850017 | 2.227659e-60 | -8.615850e-47 |
| Msa0506540 | Msa1183740 | 0.827509 | 1.504588e-54 | -8.615850e-47 |
| Msa0506540 | Msa1183910 | 0.826140 | 3.194172e-54 | -8.615850e-47 |
| Msa0506540 | Msa1188790 | 0.837424 | 5.240832e-57 | -8.615850e-47 |
| Msa0506540 | Msa1190390 | 0.818327 | 2.077508e-52 | -8.615850e-47 |
| Msa0506540 | Msa1191000 | 0.835697 | 1.442737e-56 | -8.615850e-47 |
| Msa0506540 | Msa1192040 | 0.807860 | 4.113075e-50 | -8.615850e-47 |
| Msa0506540 | Msa1201170 | 0.815622 | 8.410584e-52 | -8.615850e-47 |
| Msa0506540 | Msa1201780 | 0.800193 | 1.616275e-48 | -8.615850e-47 |
| Msa0506540 | Msa1206040 | 0.807110 | 5.933091e-50 | -8.615850e-47 |
| Msa0506540 | Msa1215980 | 0.859415 | 4.200962e-63 | -8.615850e-47 |
| Msa0506540 | Msa1215990 | 0.831757 | 1.392952e-55 | -8.615850e-47 |
| Msa0506540 | Msa1218820 | 0.830620 | 2.650263e-55 | -8.615850e-47 |
| Msa0506540 | Msa1219770 | 0.820893 | 5.391595e-53 | -8.615850e-47 |
| Msa0506540 | Msa1220030 | 0.801444 | 8.980485e-49 | -8.615850e-47 |
| Msa0506540 | Msa1223390 | 0.806485 | 8.040177e-50 | -8.615850e-47 |
| Msa0506540 | Msa1231780 | 0.800330 | 1.516390e-48 | -8.615850e-47 |
| Msa0506540 | Msa1242960 | 0.821731 | 3.454853e-53 | -8.615850e-47 |
| Msa0506540 | Msa1254100 | 0.840228 | 9.867498e-58 | -8.615850e-47 |
| Msa0506540 | Msa1254420 | 0.860514 | 1.959501e-63 | -8.615850e-47 |
| Msa0506540 | Msa1254540 | 0.868694 | 5.395997e-66 | -8.615850e-47 |
| Msa0506540 | Msa1263740 | 0.834981 | 2.188565e-56 | -8.615850e-47 |
| Msa0506540 | Msa1263780 | 0.825147 | 5.493280e-54 | -8.615850e-47 |
| Msa0506540 | Msa1266690 | 0.840560 | 8.078235e-58 | -8.615850e-47 |
| Msa0506540 | Msa1267930 | 0.880370 | 5.803816e-70 | -8.615850e-47 |
| Msa0506540 | Msa1279120 | 0.804794 | 1.820298e-49 | -8.615850e-47 |
| Msa0506540 | Msa1293610 | 0.819825 | 9.477737e-53 | -8.615850e-47 |
| Msa0506540 | Msa1294280 | 0.841777 | 3.867048e-58 | -8.615850e-47 |
| Msa0506540 | Msa1294460 | 0.861639 | 8.909194e-64 | -8.615850e-47 |
| Msa0506540 | Msa1294790 | 0.865267 | 6.683587e-65 | -8.615850e-47 |
| Msa0506540 | Msa1297070 | 0.823245 | 1.536232e-53 | -8.615850e-47 |
| Msa0506540 | Msa1300460 | 0.809035 | 2.308187e-50 | -8.615850e-47 |
| Msa0506540 | Msa1301820 | 0.870843 | 1.074067e-66 | -8.615850e-47 |
| Msa0506540 | Msa1301830 | 0.823554 | 1.301189e-53 | -8.615850e-47 |
| Msa0506540 | Msa1305780 | 0.818176 | 2.247190e-52 | -8.615850e-47 |
| Msa0506540 | Msa1305920 | 0.826492 | 2.632893e-54 | -8.615850e-47 |
| Msa0506540 | Msa1308850 | 0.826720 | 2.323777e-54 | -8.615850e-47 |
| Msa0506540 | Msa1328870 | 0.807684 | 4.482362e-50 | -8.615850e-47 |
| Msa0506540 | Msa1332950 | 0.848256 | 6.881286e-60 | -8.615850e-47 |
| Msa0506540 | Msa1333360 | 0.847034 | 1.492963e-59 | -8.615850e-47 |
| Msa0506540 | Msa1339170 | 0.821578 | 3.748104e-53 | -8.615850e-47 |
| Msa0506540 | Msa1339230 | 0.867988 | 9.119537e-66 | -8.615850e-47 |
| Msa0506540 | Msa1361930 | 0.838393 | 2.953035e-57 | -8.615850e-47 |
| Msa0506540 | Msa1368750 | 0.820959 | 5.205269e-53 | -8.615850e-47 |
| Msa0506540 | Msa1372030 | 0.815204 | 1.042242e-51 | -8.615850e-47 |
| Msa0506540 | Msa1374790 | 0.818247 | 2.165648e-52 | -8.615850e-47 |
| Msa0506540 | Msa1381470 | 0.863646 | 2.145354e-64 | -8.615850e-47 |
| Msa0506540 | Msa1381800 | 0.860852 | 1.547194e-63 | -8.615850e-47 |
| Msa0506540 | Msa1382830 | 0.810590 | 1.068677e-50 | -8.615850e-47 |
| Msa0506540 | Msa1387500 | 0.879266 | 1.434114e-69 | -8.615850e-47 |
| Msa0506540 | Msa1389820 | 0.821756 | 3.408494e-53 | -8.615850e-47 |
| Msa0506540 | Msa1390210 | 0.812894 | 3.369480e-51 | -8.615850e-47 |
| Msa0506540 | Msa1393560 | 0.878688 | 2.294090e-69 | -8.615850e-47 |
| Msa0506540 | Msa1399190 | 0.878516 | 2.636434e-69 | -8.615850e-47 |
| Msa0506540 | Msa1406720 | 0.832321 | 1.010285e-55 | -8.615850e-47 |
| Msa0506540 | Msa1410190 | 0.820278 | 7.462751e-53 | -8.615850e-47 |
| Msa0506540 | Msa1424370 | 0.804626 | 1.973965e-49 | -8.615850e-47 |
| Msa0506540 | Msa1426320 | 0.862197 | 6.011658e-64 | -8.615850e-47 |
| Msa0506540 | Msa1432520 | 0.834337 | 3.177885e-56 | -8.615850e-47 |
| Msa0506540 | Msa1434640 | 0.845997 | 2.863163e-59 | -8.615850e-47 |
| Msa0506540 | Msa1435100 | 0.872166 | 3.917356e-67 | -8.615850e-47 |
| Msa0506540 | Msa1439730 | 0.877912 | 4.295092e-69 | -8.615850e-47 |
| Msa0506540 | Msa1442260 | 0.822390 | 2.430488e-53 | -8.615850e-47 |
| Msa0506540 | Msa1447170 | 0.803029 | 4.235404e-49 | -8.615850e-47 |
| Msa0506540 | Msa1450190 | 0.805285 | 1.436819e-49 | -8.615850e-47 |
| Msa0506540 | Msa1451820 | 0.817893 | 2.603130e-52 | -8.615850e-47 |
| Msa0506540 | Msa1454010 | 0.806547 | 7.801956e-50 | -8.615850e-47 |
| Msa0506540 | Msa1457840 | 0.844577 | 6.936683e-59 | -8.615850e-47 |
| Msa0506540 | Msa1461260 | 0.833538 | 5.034474e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506540 | MtrunA17_Chr3g0108291 | 84.758 | 433 | 22 | 3 | 1 | 389 | 1 | 433 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506540 | AT5G41880.1 | 59.259 | 432 | 131 | 4 | 3 | 389 | 20 | 451 | 0.0 | 521 |
Find 108 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGCAACTTTAAATTAT+AGG | 0.152070 | 3_4:-52993546 | None:intergenic |
| CTACTGATCTAATTAATTAT+TGG | 0.154652 | 3_4:+52993920 | Msa0506540:three_prime_UTR |
| CTGATGTTTGCTTGGATTGC+TGG | 0.175005 | 3_4:+52988866 | Msa0506540:CDS |
| GTAATATGGTTTGAGAAAAT+TGG | 0.179480 | 3_4:-52987979 | None:intergenic |
| TGCTGCTCTTCATCCTTTCT+TGG | 0.219140 | 3_4:+52990462 | Msa0506540:CDS |
| CTTATGCTGATATATTTAAA+TGG | 0.242848 | 3_4:+52988143 | Msa0506540:CDS |
| AAAATAAGTAAACCCTAAAA+TGG | 0.269096 | 3_4:-52986958 | None:intergenic |
| GAGTGTTCTCGCTTGAAATT+TGG | 0.273978 | 3_4:-52987002 | None:intergenic |
| AAAATACAAAAGGGAGATAA+AGG | 0.290028 | 3_4:-52993678 | None:intergenic |
| ATATTATGTTACTTTGGATT+AGG | 0.306296 | 3_4:+52993865 | Msa0506540:three_prime_UTR |
| TCAAACTCGTCGCACCGATT+TGG | 0.308608 | 3_4:-52992222 | None:intergenic |
| CTTCTGAACTTAGGGGAAAA+TGG | 0.309145 | 3_4:+52990769 | Msa0506540:CDS |
| ATATTTAAATGGATGTCTTA+TGG | 0.313114 | 3_4:+52988154 | Msa0506540:CDS |
| GGATGTAACTAACCGTAATA+TGG | 0.322356 | 3_4:-52987993 | None:intergenic |
| CAAACTCGTCGCACCGATTT+GGG | 0.324581 | 3_4:-52992221 | None:intergenic |
| CAGCTGTTGCTTCTGAACTT+AGG | 0.327727 | 3_4:+52990760 | Msa0506540:intron |
| TTTAACTTTGTGGAATTGTT+TGG | 0.334318 | 3_4:+52987857 | Msa0506540:five_prime_UTR |
| CTCAGTTCTCACTCACTCTA+AGG | 0.345100 | 3_4:+52987040 | Msa0506540:five_prime_UTR |
| CAAGGGTGCTGATGTTTGCT+TGG | 0.351983 | 3_4:+52988858 | Msa0506540:CDS |
| TGCATAAATTTACCTGGAAA+AGG | 0.360793 | 3_4:-52992263 | None:intergenic |
| AGCTGTTGCTTCTGAACTTA+GGG | 0.372658 | 3_4:+52990761 | Msa0506540:intron |
| AAAATCAACTCCCTCTCAAC+TGG | 0.382678 | 3_4:-52988688 | None:intergenic |
| ATGTGGTTCAGCCTGCAAAA+AGG | 0.392955 | 3_4:+52988629 | Msa0506540:intron |
| TGCAAGCAGTTGTTGCAATC+TGG | 0.396731 | 3_4:+52990852 | Msa0506540:CDS |
| TCATAAGAAGGTTTCTTTGA+TGG | 0.398817 | 3_4:+52990438 | Msa0506540:CDS |
| TACTTACCCCAGGCTAGATA+TGG | 0.399800 | 3_4:+52991669 | Msa0506540:CDS |
| GGAAGAATCAATCACTTTGA+TGG | 0.406439 | 3_4:-52988905 | None:intergenic |
| GGGGAAAATGGCAAGACAAT+AGG | 0.421032 | 3_4:+52990781 | Msa0506540:CDS |
| TTCATTGTTGGGTGTGTGAT+GGG | 0.424472 | 3_4:+52989986 | Msa0506540:CDS |
| CATAAGAAGGTTTCTTTGAT+GGG | 0.427571 | 3_4:+52990439 | Msa0506540:CDS |
| AGTCTTGGTTGTATATAAGT+TGG | 0.427799 | 3_4:+52993761 | Msa0506540:three_prime_UTR |
| AGCGAAATATTATGTTACTT+TGG | 0.436557 | 3_4:+52993859 | Msa0506540:three_prime_UTR |
| TCGCACCGATTTGGGTCAAT+AGG | 0.440085 | 3_4:-52992213 | None:intergenic |
| CTAGATGAGCTTAATAATGA+AGG | 0.443170 | 3_4:+52992560 | Msa0506540:CDS |
| GACGAAGAGGTGTTCATTGT+TGG | 0.457076 | 3_4:+52989974 | Msa0506540:CDS |
| GCATAAATTTACCTGGAAAA+GGG | 0.457809 | 3_4:-52992262 | None:intergenic |
| AAATGTAATGTACATTCATC+AGG | 0.458206 | 3_4:-52990663 | None:intergenic |
| GGCTTGAGAGCTGATGTTAA+TGG | 0.464362 | 3_4:+52992581 | Msa0506540:CDS |
| CACATACTCTGGGTCTATAG+TGG | 0.465375 | 3_4:+52989952 | Msa0506540:CDS |
| ACTACTGTTTCAGATGACTT+TGG | 0.467950 | 3_4:+52989922 | Msa0506540:intron |
| TACCAAAAGAAACTCTTCAT+AGG | 0.475843 | 3_4:-52994002 | None:intergenic |
| GTTGCAATCTGGAAAACATA+AGG | 0.478385 | 3_4:+52990863 | Msa0506540:CDS |
| GTTCATTGTTGGGTGTGTGA+TGG | 0.479437 | 3_4:+52989985 | Msa0506540:CDS |
| TTGGTCCATGGGAAGCAGTA+AGG | 0.482494 | 3_4:+52987876 | Msa0506540:five_prime_UTR |
| ATCAATCACTTTGATGGCTA+TGG | 0.483305 | 3_4:-52988899 | None:intergenic |
| CATAATATTTCGCTCCATCA+TGG | 0.485388 | 3_4:-52993850 | None:intergenic |
| ACAGACCTCCATATCTAGCC+TGG | 0.488928 | 3_4:-52991677 | None:intergenic |
| ACGAAGAGGTGTTCATTGTT+GGG | 0.495453 | 3_4:+52989975 | Msa0506540:CDS |
| GAATGGAGTGGAACTTCCCT+TGG | 0.497327 | 3_4:+52993200 | Msa0506540:intron |
| CTCAAGACTTACGCCAAGAA+AGG | 0.498182 | 3_4:-52990475 | None:intergenic |
| GTTGAATTGAATTTCAGTCT+TGG | 0.499453 | 3_4:+52993746 | Msa0506540:three_prime_UTR |
| CATTTAAATATATCAGCATA+AGG | 0.502545 | 3_4:-52988142 | None:intergenic |
| TGTTCTCGCTTGAAATTTGG+TGG | 0.503445 | 3_4:-52986999 | None:intergenic |
| TGTGGAATTGTTTGGTCCAT+GGG | 0.505438 | 3_4:+52987865 | Msa0506540:five_prime_UTR |
| AAATACAAAAGGGAGATAAA+GGG | 0.507137 | 3_4:-52993677 | None:intergenic |
| TTGGCTTCAAGCACATACTC+TGG | 0.507696 | 3_4:+52989941 | Msa0506540:CDS |
| ATTATTATCACTTTGTGCAT+AGG | 0.508200 | 3_4:-52988656 | None:intergenic |
| ATAAGTTGGATGAAAAGCTT+AGG | 0.509967 | 3_4:+52993775 | Msa0506540:three_prime_UTR |
| CAAACTCAGAATCTTGTTGT+GGG | 0.516943 | 3_4:-52987953 | None:intergenic |
| ATTCATCAGGAATCATGCTT+AGG | 0.517226 | 3_4:-52990650 | None:intergenic |
| TGTGTGATGGGAAGGCTAGA+AGG | 0.517538 | 3_4:+52989998 | Msa0506540:CDS |
| GTGTTCCTATTGACCCAAAT+CGG | 0.520731 | 3_4:+52992208 | Msa0506540:CDS |
| TTGTGGAATTGTTTGGTCCA+TGG | 0.520844 | 3_4:+52987864 | Msa0506540:five_prime_UTR |
| TGCATTGCACTACCAACCTA+TGG | 0.526014 | 3_4:-52993579 | None:intergenic |
| AAAAGGGTGGGTACTGTGGT+AGG | 0.526266 | 3_4:-52992246 | None:intergenic |
| ACGCAAATTACTACCTCTCA+AGG | 0.539006 | 3_4:-52988926 | None:intergenic |
| AGATATTAATGTTGTGCGGT+GGG | 0.549249 | 3_4:+52990824 | Msa0506540:CDS |
| CAATGAAAATAGTCATAAGA+AGG | 0.549770 | 3_4:+52990426 | Msa0506540:CDS |
| TTGATGGCTATGGTCATCAA+TGG | 0.552196 | 3_4:-52988889 | None:intergenic |
| TCAAACTCAGAATCTTGTTG+TGG | 0.556258 | 3_4:-52987954 | None:intergenic |
| CAGACCTCCATATCTAGCCT+GGG | 0.557133 | 3_4:-52991676 | None:intergenic |
| AAATGGATGTCTTATGGCAA+CGG | 0.560209 | 3_4:+52988160 | Msa0506540:CDS |
| TAGTGCAATGCACTATTGAT+TGG | 0.560251 | 3_4:+52993590 | Msa0506540:exon |
| TTGTTGGGTGTGTGATGGGA+AGG | 0.560818 | 3_4:+52989990 | Msa0506540:CDS |
| ATATTTCTCCTCAGATGTCT+CGG | 0.562210 | 3_4:-52987899 | None:intergenic |
| TACTGCAGGAGGAGATAGAA+AGG | 0.563804 | 3_4:+52993522 | Msa0506540:intron |
| AAGATATTAATGTTGTGCGG+TGG | 0.564243 | 3_4:+52990823 | Msa0506540:CDS |
| CTCGGCCTTACTGCTTCCCA+TGG | 0.564792 | 3_4:-52987881 | None:intergenic |
| TGGCTTCAAGCACATACTCT+GGG | 0.565334 | 3_4:+52989942 | Msa0506540:CDS |
| AAAGCGTAACTGAGTTTCCA+AGG | 0.568628 | 3_4:-52993217 | None:intergenic |
| TAAATTTACCTGGAAAAGGG+TGG | 0.571443 | 3_4:-52992259 | None:intergenic |
| GTGATTGATTCTTCCTTGAG+AGG | 0.573001 | 3_4:+52988913 | Msa0506540:CDS |
| AAAATAGTCCTTGAGAACAT+TGG | 0.578336 | 3_4:-52990568 | None:intergenic |
| ATCATACACCAATGTTCTCA+AGG | 0.579918 | 3_4:+52990560 | Msa0506540:CDS |
| TGTTCTGCTATACTTACCCC+AGG | 0.586755 | 3_4:+52991659 | Msa0506540:CDS |
| CAGCAGTCAAAGAACTCCAT+AGG | 0.587531 | 3_4:+52993563 | Msa0506540:CDS |
| GTTCTCGCTTGAAATTTGGT+GGG | 0.592760 | 3_4:-52986998 | None:intergenic |
| GGATGTCTTATGGCAACGGT+AGG | 0.598567 | 3_4:+52988164 | Msa0506540:CDS |
| TATTTCGCTCCATCATGGAA+TGG | 0.600758 | 3_4:-52993845 | None:intergenic |
| CTGGAAAAGGGTGGGTACTG+TGG | 0.601068 | 3_4:-52992250 | None:intergenic |
| TGTCTTCACTCCAGTTGAGA+GGG | 0.602905 | 3_4:+52988678 | Msa0506540:CDS |
| CAGTAAGGCCGAGACATCTG+AGG | 0.604155 | 3_4:+52987891 | Msa0506540:five_prime_UTR |
| ATGTCTTCACTCCAGTTGAG+AGG | 0.606406 | 3_4:+52988677 | Msa0506540:CDS |
| AGTCAAAGAACTCCATAGGT+TGG | 0.606427 | 3_4:+52993567 | Msa0506540:CDS |
| TTACCCCAGGCTAGATATGG+AGG | 0.628406 | 3_4:+52991672 | Msa0506540:CDS |
| AAATTTACCTGGAAAAGGGT+GGG | 0.629339 | 3_4:-52992258 | None:intergenic |
| TCAAAACTTACTCGCTACTG+AGG | 0.630959 | 3_4:+52990611 | Msa0506540:CDS |
| TTCGCTCCATCATGGAATGG+AGG | 0.636834 | 3_4:-52993842 | None:intergenic |
| GCTGTTGCTTCTGAACTTAG+GGG | 0.640099 | 3_4:+52990762 | Msa0506540:intron |
| GATGTCAGATACTGCTGCAA+GGG | 0.646848 | 3_4:+52988841 | Msa0506540:CDS |
| AAGCGTAACTGAGTTTCCAA+GGG | 0.661590 | 3_4:-52993216 | None:intergenic |
| AAGAAGATATTAATGTTGTG+CGG | 0.661821 | 3_4:+52990820 | Msa0506540:CDS |
| ACTCACAAGAAACAAATCAG+AGG | 0.692075 | 3_4:-52993715 | None:intergenic |
| TGGGTCTATAGTGGACGAAG+AGG | 0.693990 | 3_4:+52989961 | Msa0506540:CDS |
| TGATGTCAGATACTGCTGCA+AGG | 0.695095 | 3_4:+52988840 | Msa0506540:CDS |
| AGACCTCCATATCTAGCCTG+GGG | 0.714360 | 3_4:-52991675 | None:intergenic |
| TGTTTGGTAGCAGAATGGAG+TGG | 0.725763 | 3_4:+52993188 | Msa0506540:intron |
| TTGAGAGCTGATGTTAATGG+TGG | 0.727071 | 3_4:+52992584 | Msa0506540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTATTTAGTAGATTTT+GGG | + | chr3_4:52987827-52987846 | Msa0506540:intron | 10.0% |
| !! | AATAAGAATAAATATGATTA+TGG | - | chr3_4:52991409-52991428 | None:intergenic | 10.0% |
| !!! | CTTAATTATTTAGTAGATTT+TGG | + | chr3_4:52987826-52987845 | Msa0506540:intron | 15.0% |
| !! | AAAGAGAAAAAAATAAAAGA+GGG | - | chr3_4:52988788-52988807 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTTTCTCTTTCA+TGG | + | chr3_4:52988790-52988809 | Msa0506540:intron | 15.0% |
| !!! | AGACTTAATTTTTAAAAAAC+AGG | + | chr3_4:52989007-52989026 | Msa0506540:intron | 15.0% |
| !!! | AATTATTATAGATGGTTTTA+GGG | - | chr3_4:52989761-52989780 | None:intergenic | 15.0% |
| !!! | TAATTATTATAGATGGTTTT+AGG | - | chr3_4:52989762-52989781 | None:intergenic | 15.0% |
| !!! | AAGGTATAAAATATTCTTTT+TGG | + | chr3_4:52990882-52990901 | Msa0506540:intron | 15.0% |
| !!! | AGGTATAAAATATTCTTTTT+GGG | + | chr3_4:52990883-52990902 | Msa0506540:intron | 15.0% |
| !!! | TATTATTTATATGCTTGTTA+AGG | - | chr3_4:52991138-52991157 | None:intergenic | 15.0% |
| !!! | TTGTTTATTTATTTAAGATG+AGG | + | chr3_4:52991313-52991332 | Msa0506540:intron | 15.0% |
| !! | TGATATATAGATACATATTT+GGG | - | chr3_4:52991790-52991809 | None:intergenic | 15.0% |
| !! | TTGATATATAGATACATATT+TGG | - | chr3_4:52991791-52991810 | None:intergenic | 15.0% |
| !! | AATAAAAATTGCAAATGTTT+AGG | - | chr3_4:52992645-52992664 | None:intergenic | 15.0% |
| !!! | TTTTGAAACATATTTAAGAA+TGG | + | chr3_4:52992774-52992793 | Msa0506540:intron | 15.0% |
| !!! | TTTGAAACATATTTAAGAAT+GGG | + | chr3_4:52992775-52992794 | Msa0506540:intron | 15.0% |
| !!! | GTTTTTAGAAAAATACAAAA+GGG | - | chr3_4:52993690-52993709 | None:intergenic | 15.0% |
| !!! | AGTTTTTAGAAAAATACAAA+AGG | - | chr3_4:52993691-52993710 | None:intergenic | 15.0% |
| !! | AAAATAAGTAAACCCTAAAA+TGG | - | chr3_4:52986961-52986980 | None:intergenic | 20.0% |
| !!! | TTGTTTTAGGGTTTTAAAAT+TGG | + | chr3_4:52987106-52987125 | Msa0506540:intron | 20.0% |
| !!! | TGTTTTAGGGTTTTAAAATT+GGG | + | chr3_4:52987107-52987126 | Msa0506540:intron | 20.0% |
| !! | GAGCAAAATTACATTAAAAT+CGG | - | chr3_4:52987429-52987448 | None:intergenic | 20.0% |
| !!! | AATCATACGATTTTATGATT+CGG | + | chr3_4:52987488-52987507 | Msa0506540:intron | 20.0% |
| !!! | AATTTTCTCAAACCATATTA+CGG | + | chr3_4:52987981-52988000 | Msa0506540:CDS | 20.0% |
| !! | CATTTAAATATATCAGCATA+AGG | - | chr3_4:52988145-52988164 | None:intergenic | 20.0% |
| !! | CTTATGCTGATATATTTAAA+TGG | + | chr3_4:52988143-52988162 | Msa0506540:CDS | 20.0% |
| !! | ATATTTAAATGGATGTCTTA+TGG | + | chr3_4:52988154-52988173 | Msa0506540:CDS | 20.0% |
| !! | CACAATAATACTGAATTATA+GGG | - | chr3_4:52988461-52988480 | None:intergenic | 20.0% |
| !! | AACCACATAAAAATTGATTA+GGG | - | chr3_4:52988617-52988636 | None:intergenic | 20.0% |
| !! | GAAAGAGAAAAAAATAAAAG+AGG | - | chr3_4:52988789-52988808 | None:intergenic | 20.0% |
| !! | CTTTCATTTATTTAAAAGAG+AGG | - | chr3_4:52989190-52989209 | None:intergenic | 20.0% |
| !! | GATTCCTATTTGAATATTTA+TGG | + | chr3_4:52989375-52989394 | Msa0506540:intron | 20.0% |
| !! | CTCAATCTAATTATTATAGA+TGG | - | chr3_4:52989769-52989788 | None:intergenic | 20.0% |
| !!! | CTTGATAATGAATTTTGTTT+TGG | + | chr3_4:52989898-52989917 | Msa0506540:intron | 20.0% |
| !! | TATATTATCTTTACTATTGC+AGG | + | chr3_4:52990090-52990109 | Msa0506540:intron | 20.0% |
| !! | ACAAACATTAATACAAGTAT+GGG | - | chr3_4:52990384-52990403 | None:intergenic | 20.0% |
| !! | AACAAACATTAATACAAGTA+TGG | - | chr3_4:52990385-52990404 | None:intergenic | 20.0% |
| !! | AACTTATGAATATACAACTT+TGG | - | chr3_4:52991099-52991118 | None:intergenic | 20.0% |
| !! | AGATTAATTTCCATATTACT+TGG | + | chr3_4:52991277-52991296 | Msa0506540:intron | 20.0% |
| !! | ATGATATTAACCAAGTAATA+TGG | - | chr3_4:52991290-52991309 | None:intergenic | 20.0% |
| !!! | AGTCTTGTATTTCTATAAAT+AGG | + | chr3_4:52991336-52991355 | Msa0506540:intron | 20.0% |
| !!! | GTCTTGTATTTCTATAAATA+GGG | + | chr3_4:52991337-52991356 | Msa0506540:intron | 20.0% |
| !! | CGTAAATGAAAATAACTTAA+TGG | - | chr3_4:52991751-52991770 | None:intergenic | 20.0% |
| !! | ATATATAGATACATATTTGG+GGG | - | chr3_4:52991788-52991807 | None:intergenic | 20.0% |
| !! | GATATATAGATACATATTTG+GGG | - | chr3_4:52991789-52991808 | None:intergenic | 20.0% |
| !!! | AAACTAGTCAAAAGTATTAT+TGG | - | chr3_4:52991817-52991836 | None:intergenic | 20.0% |
| !! | TTAAACGCAAAAATTTAGAT+TGG | - | chr3_4:52991848-52991867 | None:intergenic | 20.0% |
| !! | TATTAAATCTATCTTCTCTT+TGG | + | chr3_4:52992079-52992098 | Msa0506540:intron | 20.0% |
| !! | TTGAAACATATTTAAGAATG+GGG | + | chr3_4:52992776-52992795 | Msa0506540:intron | 20.0% |
| !! | TATAATGCTTAGTTTATAAG+TGG | + | chr3_4:52993036-52993055 | Msa0506540:intron | 20.0% |
| !!! | ATATTATGTTACTTTGGATT+AGG | + | chr3_4:52993865-52993884 | Msa0506540:three_prime_UTR | 20.0% |
| !! | CTACTGATCTAATTAATTAT+TGG | + | chr3_4:52993920-52993939 | Msa0506540:three_prime_UTR | 20.0% |
| !!! | TATTCCAATTGCTTGTTTTA+GGG | + | chr3_4:52987094-52987113 | Msa0506540:intron | 25.0% |
| ! | CACAAGTAAATGTTCAAATT+TGG | - | chr3_4:52987189-52987208 | None:intergenic | 25.0% |
| ! | TATTTGAGTAAATTTCGATC+TGG | - | chr3_4:52987327-52987346 | None:intergenic | 25.0% |
| ! | TTTACTCAAATAAAAAACCC+AGG | + | chr3_4:52987335-52987354 | Msa0506540:intron | 25.0% |
| ! | TTACTCAAATAAAAAACCCA+GGG | + | chr3_4:52987336-52987355 | Msa0506540:intron | 25.0% |
| ! | AATTCACACACAAAAAAAGT+GGG | - | chr3_4:52987675-52987694 | None:intergenic | 25.0% |
| !! | TTTAACTTTGTGGAATTGTT+TGG | + | chr3_4:52987857-52987876 | Msa0506540:five_prime_UTR | 25.0% |
| ! | GTAATATGGTTTGAGAAAAT+TGG | - | chr3_4:52987982-52988001 | None:intergenic | 25.0% |
| ! | AGAAAATAAGAGAAAACGTA+TGG | - | chr3_4:52988102-52988121 | None:intergenic | 25.0% |
| ! | GGTGTAAAATAATTGTAGAT+GGG | + | chr3_4:52988247-52988266 | Msa0506540:intron | 25.0% |
| ! | GCACAATAATACTGAATTAT+AGG | - | chr3_4:52988462-52988481 | None:intergenic | 25.0% |
| ! | AAAATTGATTAGGGGAAAAA+TGG | - | chr3_4:52988608-52988627 | None:intergenic | 25.0% |
| ! | ACCACATAAAAATTGATTAG+GGG | - | chr3_4:52988616-52988635 | None:intergenic | 25.0% |
| ! | GAACCACATAAAAATTGATT+AGG | - | chr3_4:52988618-52988637 | None:intergenic | 25.0% |
| ! | ATTATTATCACTTTGTGCAT+AGG | - | chr3_4:52988659-52988678 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCTCTTTCATGGT+CGG | + | chr3_4:52988794-52988813 | Msa0506540:intron | 25.0% |
| !! | TTCTTTTATAGAGAAATGCT+AGG | + | chr3_4:52989040-52989059 | Msa0506540:intron | 25.0% |
| !! | TCTCTAACAATCTCTTTTAT+TGG | + | chr3_4:52989084-52989103 | Msa0506540:intron | 25.0% |
| !! | CTCTAACAATCTCTTTTATT+GGG | + | chr3_4:52989085-52989104 | Msa0506540:intron | 25.0% |
| !!! | TATTTAAGAGTATTTCCACT+AGG | - | chr3_4:52989234-52989253 | None:intergenic | 25.0% |
| ! | CCTACCATAAATATTCAAAT+AGG | - | chr3_4:52989382-52989401 | None:intergenic | 25.0% |
| ! | CCTATTTGAATATTTATGGT+AGG | + | chr3_4:52989379-52989398 | Msa0506540:intron | 25.0% |
| ! | TCTACTCTTAACAGATATAA+TGG | - | chr3_4:52989497-52989516 | None:intergenic | 25.0% |
| ! | ATGCTTAACTGAAATTAAGA+TGG | + | chr3_4:52989695-52989714 | Msa0506540:intron | 25.0% |
| ! | TATACTAAGTAACAACTAGT+GGG | + | chr3_4:52990168-52990187 | Msa0506540:intron | 25.0% |
| ! | CAATGAAAATAGTCATAAGA+AGG | + | chr3_4:52990426-52990445 | Msa0506540:CDS | 25.0% |
| ! | AAATGTAATGTACATTCATC+AGG | - | chr3_4:52990666-52990685 | None:intergenic | 25.0% |
| ! | AGCAGTAAAATGAAATAACA+AGG | - | chr3_4:52990709-52990728 | None:intergenic | 25.0% |
| ! | AAGAAGATATTAATGTTGTG+CGG | + | chr3_4:52990820-52990839 | Msa0506540:CDS | 25.0% |
| ! | TTAGAATACAAAGGTAACAA+TGG | + | chr3_4:52990911-52990930 | Msa0506540:intron | 25.0% |
| !! | ATACTCTAAAGATAAGAAAC+TGG | - | chr3_4:52991251-52991270 | None:intergenic | 25.0% |
| ! | GGTGTAATATAATTGAGAAT+AGG | - | chr3_4:52991388-52991407 | None:intergenic | 25.0% |
| ! | AACATCTCAATTTAACAATC+TGG | + | chr3_4:52991445-52991464 | Msa0506540:intron | 25.0% |
| ! | TATATAGATACATATTTGGG+GGG | - | chr3_4:52991787-52991806 | None:intergenic | 25.0% |
| !! | ATTTGATACTAACCTGTTTT+CGG | - | chr3_4:52991940-52991959 | None:intergenic | 25.0% |
| !! | TTTTCTGTCTGAAAAATCAT+AGG | - | chr3_4:52992053-52992072 | None:intergenic | 25.0% |
| ! | TGTTTAAGTGCATAATTACT+TGG | + | chr3_4:52992157-52992176 | Msa0506540:intron | 25.0% |
| ! | TGGTAATTCTTCTTTATTCT+AGG | + | chr3_4:52992177-52992196 | Msa0506540:intron | 25.0% |
| ! | TATTGTTGCATAAATTTACC+TGG | - | chr3_4:52992272-52992291 | None:intergenic | 25.0% |
| !!! | TTTTTTATTTGCAACAGAGA+TGG | + | chr3_4:52992296-52992315 | Msa0506540:intron | 25.0% |
| !! | TCTTTGCATAGTTTTCATTA+GGG | + | chr3_4:52992335-52992354 | Msa0506540:intron | 25.0% |
| ! | GGATGTTTACATTTATTACT+TGG | + | chr3_4:52992356-52992375 | Msa0506540:intron | 25.0% |
| ! | TTACATTTATTACTTGGAGT+AGG | + | chr3_4:52992362-52992381 | Msa0506540:intron | 25.0% |
| ! | ACGACAATATATAGGAAAAA+GGG | - | chr3_4:52992412-52992431 | None:intergenic | 25.0% |
| ! | GAAGATATTGATATGCTTAA+AGG | - | chr3_4:52992454-52992473 | None:intergenic | 25.0% |
| ! | ATGTTACAAATCACAATATC+AGG | - | chr3_4:52992532-52992551 | None:intergenic | 25.0% |
| ! | CATGTATAGAAGACTTAATA+GGG | + | chr3_4:52992674-52992693 | Msa0506540:intron | 25.0% |
| !! | TAATAGGGATATTGCATTTT+TGG | + | chr3_4:52992689-52992708 | Msa0506540:intron | 25.0% |
| ! | CCTTCTATAAATTCTTAAAG+GGG | - | chr3_4:52993011-52993030 | None:intergenic | 25.0% |
| ! | GCCTTCTATAAATTCTTAAA+GGG | - | chr3_4:52993012-52993031 | None:intergenic | 25.0% |
| ! | TGCCTTCTATAAATTCTTAA+AGG | - | chr3_4:52993013-52993032 | None:intergenic | 25.0% |
| ! | GAGATAAAAACAAGAAACAA+AGG | + | chr3_4:52993058-52993077 | Msa0506540:intron | 25.0% |
| ! | ATTTGCAAAATGGAAATGTA+GGG | - | chr3_4:52993096-52993115 | None:intergenic | 25.0% |
| ! | AATGAAAAGGATTTGCAAAA+TGG | - | chr3_4:52993106-52993125 | None:intergenic | 25.0% |
| ! | ATAAGCATTAGAAGATATGA+GGG | - | chr3_4:52993135-52993154 | None:intergenic | 25.0% |
| ! | AATAAGCATTAGAAGATATG+AGG | - | chr3_4:52993136-52993155 | None:intergenic | 25.0% |
| !!! | AGTGATTTTGATACATTGTT+TGG | + | chr3_4:52993172-52993191 | Msa0506540:intron | 25.0% |
| ! | ATTACCAACAATAGTTATGA+TGG | - | chr3_4:52993499-52993518 | None:intergenic | 25.0% |
| ! | AAATACAAAAGGGAGATAAA+GGG | - | chr3_4:52993680-52993699 | None:intergenic | 25.0% |
| ! | AAAATACAAAAGGGAGATAA+AGG | - | chr3_4:52993681-52993700 | None:intergenic | 25.0% |
| !! | AGCGAAATATTATGTTACTT+TGG | + | chr3_4:52993859-52993878 | Msa0506540:three_prime_UTR | 25.0% |
| !!! | TGCTTCATGACTATTTTTTT+GGG | - | chr3_4:52993892-52993911 | None:intergenic | 25.0% |
| !!! | TTGCTTCATGACTATTTTTT+TGG | - | chr3_4:52993893-52993912 | None:intergenic | 25.0% |
| !! | TAGGGTTTACTTATTTTCAG+TGG | + | chr3_4:52986964-52986983 | Msa0506540:five_prime_UTR | 30.0% |
| !! | AGGGTTTACTTATTTTCAGT+GGG | + | chr3_4:52986965-52986984 | Msa0506540:five_prime_UTR | 30.0% |
| CTAAAACAAGCAATTGGAAT+AGG | - | chr3_4:52987095-52987114 | None:intergenic | 30.0% | |
| !! | CTATTCCAATTGCTTGTTTT+AGG | + | chr3_4:52987093-52987112 | Msa0506540:intron | 30.0% |
| AAAACCCTAAAACAAGCAAT+TGG | - | chr3_4:52987101-52987120 | None:intergenic | 30.0% | |
| TCGATTAGATGAATTATGCT+TGG | + | chr3_4:52987225-52987244 | Msa0506540:intron | 30.0% | |
| TAGATGAATTATGCTTGGTT+TGG | + | chr3_4:52987230-52987249 | Msa0506540:intron | 30.0% | |
| !!! | GTTACTTTGGTTTTAGAGAA+AGG | + | chr3_4:52987252-52987271 | Msa0506540:intron | 30.0% |
| ATTCTTGATTATATGCACGA+TGG | + | chr3_4:52987450-52987469 | Msa0506540:intron | 30.0% | |
| AATTGTAAAACTGTCAAACC+AGG | - | chr3_4:52987591-52987610 | None:intergenic | 30.0% | |
| ! | GGTTTGACAGTTTTACAATT+TGG | + | chr3_4:52987591-52987610 | Msa0506540:intron | 30.0% |
| ! | AATTTGGTAACAGTCATAAC+AGG | + | chr3_4:52987607-52987626 | Msa0506540:intron | 30.0% |
| CAATTCACACACAAAAAAAG+TGG | - | chr3_4:52987676-52987695 | None:intergenic | 30.0% | |
| TTTACATCTCAAGTTTCAAG+TGG | - | chr3_4:52987701-52987720 | None:intergenic | 30.0% | |
| CTTGTAAGTCACAATCAATA+AGG | - | chr3_4:52987745-52987764 | None:intergenic | 30.0% | |
| ! | CTTATTGATTGTGACTTACA+AGG | + | chr3_4:52987743-52987762 | Msa0506540:intron | 30.0% |
| !!! | GGGTTTTAGTTTTAACTTTG+TGG | + | chr3_4:52987847-52987866 | Msa0506540:intron | 30.0% |
| ! | TTCTCATTTTCTGTCTCTTT+TGG | + | chr3_4:52988018-52988037 | Msa0506540:intron | 30.0% |
| !!! | TCTCTTATTTTCTTCTTACC+AGG | + | chr3_4:52988109-52988128 | Msa0506540:intron | 30.0% |
| GGGTGTAAAATAATTGTAGA+TGG | + | chr3_4:52988246-52988265 | Msa0506540:intron | 30.0% | |
| !!! | TAAAGGGCATTTTTCTTTGA+TGG | - | chr3_4:52988388-52988407 | None:intergenic | 30.0% |
| GTCCAATGTCAATCTTTAAA+GGG | - | chr3_4:52988404-52988423 | None:intergenic | 30.0% | |
| TTACTGTTTAATAGTGGTAG+TGG | + | chr3_4:52988509-52988528 | Msa0506540:intron | 30.0% | |
| ! | TCCCCTAATCAATTTTTATG+TGG | + | chr3_4:52988612-52988631 | Msa0506540:intron | 30.0% |
| AGTATCTAAAAACTTTCAGC+AGG | - | chr3_4:52988744-52988763 | None:intergenic | 30.0% | |
| TCTTATATGATGTGTACAGA+TGG | + | chr3_4:52988948-52988967 | Msa0506540:intron | 30.0% | |
| GAGTAAATATCATGAAGTGA+AGG | - | chr3_4:52989537-52989556 | None:intergenic | 30.0% | |
| ATGTTCAATACCATATGCTA+CGG | - | chr3_4:52989578-52989597 | None:intergenic | 30.0% | |
| AGAGTAAAATTCTCAATCCT+CGG | - | chr3_4:52989647-52989666 | None:intergenic | 30.0% | |
| TTAAGATGGTTAAAATACCC+TGG | + | chr3_4:52989709-52989728 | Msa0506540:intron | 30.0% | |
| ATAATTAGATTGAGCCTATC+TGG | + | chr3_4:52989775-52989794 | Msa0506540:intron | 30.0% | |
| AATGAATTCAATGACCAGAT+AGG | - | chr3_4:52989792-52989811 | None:intergenic | 30.0% | |
| ATCAAGATATCAGTGACATT+GGG | - | chr3_4:52989884-52989903 | None:intergenic | 30.0% | |
| TATCAAGATATCAGTGACAT+TGG | - | chr3_4:52989885-52989904 | None:intergenic | 30.0% | |
| ! | TGACTATTTTCGTGTTTACA+AGG | + | chr3_4:52990142-52990161 | Msa0506540:CDS | 30.0% |
| GTATACTAAGTAACAACTAG+TGG | + | chr3_4:52990167-52990186 | Msa0506540:intron | 30.0% | |
| TCACAACAATATCAACCATT+GGG | + | chr3_4:52990243-52990262 | Msa0506540:intron | 30.0% | |
| !! | AATCAAGCTTTGATAGTGTA+TGG | - | chr3_4:52990277-52990296 | None:intergenic | 30.0% |
| TCATAAGAAGGTTTCTTTGA+TGG | + | chr3_4:52990438-52990457 | Msa0506540:CDS | 30.0% | |
| CATAAGAAGGTTTCTTTGAT+GGG | + | chr3_4:52990439-52990458 | Msa0506540:CDS | 30.0% | |
| ! | GAAAAAGAAAAACGCTGATT+AGG | - | chr3_4:52990534-52990553 | None:intergenic | 30.0% |
| AAAATAGTCCTTGAGAACAT+TGG | - | chr3_4:52990571-52990590 | None:intergenic | 30.0% | |
| ! | ATTACATTTTTCTGTTCTCC+TGG | + | chr3_4:52990677-52990696 | Msa0506540:intron | 30.0% |
| TACTGCTATTATCTTATGCT+AGG | + | chr3_4:52990722-52990741 | Msa0506540:intron | 30.0% | |
| ! | AATATCTTCTTTTGCACTAG+AGG | - | chr3_4:52990811-52990830 | None:intergenic | 30.0% |
| ! | TGGGAAAGTTTAGAATACAA+AGG | + | chr3_4:52990902-52990921 | Msa0506540:intron | 30.0% |
| ATAGAAGTCAAGAGCAATAA+GGG | + | chr3_4:52990985-52991004 | Msa0506540:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+AGG | - | chr3_4:52991011-52991030 | None:intergenic | 30.0% | |
| CTAAAATAAGCCAATCCAAA+CGG | + | chr3_4:52991186-52991205 | Msa0506540:intron | 30.0% | |
| GATAAACTAAGAACCAAGTA+GGG | - | chr3_4:52991213-52991232 | None:intergenic | 30.0% | |
| AGATAAACTAAGAACCAAGT+AGG | - | chr3_4:52991214-52991233 | None:intergenic | 30.0% | |
| ACCAAGACTATTTATGTTTC+AGG | + | chr3_4:52991867-52991886 | Msa0506540:intron | 30.0% | |
| ACCTGAAACATAAATAGTCT+TGG | - | chr3_4:52991871-52991890 | None:intergenic | 30.0% | |
| GTCAATATAAAAGTTGTACG+TGG | - | chr3_4:52991967-52991986 | None:intergenic | 30.0% | |
| !! | TTTATATTGACTCAAGCTGT+TGG | + | chr3_4:52991976-52991995 | Msa0506540:intron | 30.0% |
| !! | TTATATTGACTCAAGCTGTT+GGG | + | chr3_4:52991977-52991996 | Msa0506540:intron | 30.0% |
| GCATAAATTTACCTGGAAAA+GGG | - | chr3_4:52992265-52992284 | None:intergenic | 30.0% | |
| TGCATAAATTTACCTGGAAA+AGG | - | chr3_4:52992266-52992285 | None:intergenic | 30.0% | |
| ! | GTCTTTGCATAGTTTTCATT+AGG | + | chr3_4:52992334-52992353 | Msa0506540:intron | 30.0% |
| CGACAATATATAGGAAAAAG+GGG | - | chr3_4:52992411-52992430 | None:intergenic | 30.0% | |
| CACGACAATATATAGGAAAA+AGG | - | chr3_4:52992413-52992432 | None:intergenic | 30.0% | |
| TTTCCTATATATTGTCGTGT+TGG | + | chr3_4:52992414-52992433 | Msa0506540:intron | 30.0% | |
| TATCCAACACGACAATATAT+AGG | - | chr3_4:52992420-52992439 | None:intergenic | 30.0% | |
| GATATTGATATGCTTAAAGG+TGG | - | chr3_4:52992451-52992470 | None:intergenic | 30.0% | |
| CTAGATGAGCTTAATAATGA+AGG | + | chr3_4:52992560-52992579 | Msa0506540:CDS | 30.0% | |
| CAAATGTTTAGGAATCAAAC+GGG | - | chr3_4:52992634-52992653 | None:intergenic | 30.0% | |
| GCAAATGTTTAGGAATCAAA+CGG | - | chr3_4:52992635-52992654 | None:intergenic | 30.0% | |
| CCTATTAAGTCTTCTATACA+TGG | - | chr3_4:52992676-52992695 | None:intergenic | 30.0% | |
| CCATGTATAGAAGACTTAAT+AGG | + | chr3_4:52992673-52992692 | Msa0506540:intron | 30.0% | |
| TTTGCAATTTCTCTTCATTC+AGG | + | chr3_4:52992937-52992956 | Msa0506540:intron | 30.0% | |
| TTGCAATTTCTCTTCATTCA+GGG | + | chr3_4:52992938-52992957 | Msa0506540:intron | 30.0% | |
| ! | CCCCTTTAAGAATTTATAGA+AGG | + | chr3_4:52993008-52993027 | Msa0506540:intron | 30.0% |
| AAGAAACAAAGGAAGTAAGT+TGG | + | chr3_4:52993069-52993088 | Msa0506540:intron | 30.0% | |
| GATTTGCAAAATGGAAATGT+AGG | - | chr3_4:52993097-52993116 | None:intergenic | 30.0% | |
| TAAGCATTAGAAGATATGAG+GGG | - | chr3_4:52993134-52993153 | None:intergenic | 30.0% | |
| AAAAATGTTTCATACCTTGC+AGG | - | chr3_4:52993276-52993295 | None:intergenic | 30.0% | |
| ! | CGAGCAGAAATAATTTTATG+TGG | + | chr3_4:52993322-52993341 | Msa0506540:intron | 30.0% |
| CATGTTTAAACGAGAAACAA+AGG | - | chr3_4:52993369-52993388 | None:intergenic | 30.0% | |
| TAGCTGACACTAAAGAATAA+GGG | - | chr3_4:52993404-52993423 | None:intergenic | 30.0% | |
| TTAGCTGACACTAAAGAATA+AGG | - | chr3_4:52993405-52993424 | None:intergenic | 30.0% | |
| CTATCCATCATAACTATTGT+TGG | + | chr3_4:52993492-52993511 | Msa0506540:intron | 30.0% | |
| CTGCTGCAACTTTAAATTAT+AGG | - | chr3_4:52993549-52993568 | None:intergenic | 30.0% | |
| GTTGAATTGAATTTCAGTCT+TGG | + | chr3_4:52993746-52993765 | Msa0506540:three_prime_UTR | 30.0% | |
| AGTCTTGGTTGTATATAAGT+TGG | + | chr3_4:52993761-52993780 | Msa0506540:three_prime_UTR | 30.0% | |
| ! | ATAAGTTGGATGAAAAGCTT+AGG | + | chr3_4:52993775-52993794 | Msa0506540:three_prime_UTR | 30.0% |
| TTGGAATAGGAAGGAGAAAT+TGG | - | chr3_4:52987082-52987101 | None:intergenic | 35.0% | |
| AACAAGCAATTGGAATAGGA+AGG | - | chr3_4:52987091-52987110 | None:intergenic | 35.0% | |
| !! | TATGCTTGGTTTGGTTACTT+TGG | + | chr3_4:52987239-52987258 | Msa0506540:intron | 35.0% |
| GATCACAATTCTGTTGACAA+TGG | + | chr3_4:52987510-52987529 | Msa0506540:intron | 35.0% | |
| TCATAACAGGTTTGAGTACA+TGG | + | chr3_4:52987620-52987639 | Msa0506540:intron | 35.0% | |
| ATATTTCTCCTCAGATGTCT+CGG | - | chr3_4:52987902-52987921 | None:intergenic | 35.0% | |
| ! | CAAACTCAGAATCTTGTTGT+GGG | - | chr3_4:52987956-52987975 | None:intergenic | 35.0% |
| TCAAACTCAGAATCTTGTTG+TGG | - | chr3_4:52987957-52987976 | None:intergenic | 35.0% | |
| GGATGTAACTAACCGTAATA+TGG | - | chr3_4:52987996-52988015 | None:intergenic | 35.0% | |
| AAGAGACAGAAAATGAGAAC+TGG | - | chr3_4:52988017-52988036 | None:intergenic | 35.0% | |
| AAATGGATGTCTTATGGCAA+CGG | + | chr3_4:52988160-52988179 | Msa0506540:CDS | 35.0% | |
| AAATTCCCTTCTTCCAAAGT+AGG | - | chr3_4:52988295-52988314 | None:intergenic | 35.0% | |
| AAAGTCATCGTTCAAAGTGA+AGG | - | chr3_4:52988319-52988338 | None:intergenic | 35.0% | |
| ! | TGCCCTTTAAAGATTGACAT+TGG | + | chr3_4:52988399-52988418 | Msa0506540:intron | 35.0% |
| GGTCCAATGTCAATCTTTAA+AGG | - | chr3_4:52988405-52988424 | None:intergenic | 35.0% | |
| TACTGAATTATAGGGAGAGA+GGG | - | chr3_4:52988453-52988472 | None:intergenic | 35.0% | |
| ATACTGAATTATAGGGAGAG+AGG | - | chr3_4:52988454-52988473 | None:intergenic | 35.0% | |
| CTGCGTTTACTGTTTAATAG+TGG | + | chr3_4:52988503-52988522 | Msa0506540:intron | 35.0% | |
| GGAACTGGATAAAAGACTAA+AGG | - | chr3_4:52988587-52988606 | None:intergenic | 35.0% | |
| AGAGGGTAAAAATGTCAAGA+AGG | - | chr3_4:52988771-52988790 | None:intergenic | 35.0% | |
| ! | ATCAATCACTTTGATGGCTA+TGG | - | chr3_4:52988902-52988921 | None:intergenic | 35.0% |
| GGAAGAATCAATCACTTTGA+TGG | - | chr3_4:52988908-52988927 | None:intergenic | 35.0% | |
| TTTATTGGGTGAAACTCATG+TGG | + | chr3_4:52989099-52989118 | Msa0506540:intron | 35.0% | |
| TTATTGGGTGAAACTCATGT+GGG | + | chr3_4:52989100-52989119 | Msa0506540:intron | 35.0% | |
| ! | TGGATCTCAAACTTTGGAAA+TGG | - | chr3_4:52989148-52989167 | None:intergenic | 35.0% |
| GAGAAGATCATACTGATATG+TGG | - | chr3_4:52989268-52989287 | None:intergenic | 35.0% | |
| AATGATGTCTTTATTGCGTG+TGG | + | chr3_4:52989307-52989326 | Msa0506540:intron | 35.0% | |
| AATCATGTAGCATTCTGCAT+TGG | - | chr3_4:52989359-52989378 | None:intergenic | 35.0% | |
| TATGGTAGGAGAATTGTTGT+AGG | + | chr3_4:52989393-52989412 | Msa0506540:intron | 35.0% | |
| AGTAGACTTAATGCATGTGT+TGG | + | chr3_4:52989511-52989530 | Msa0506540:intron | 35.0% | |
| TGTTAATTACCCGTAGCATA+TGG | + | chr3_4:52989565-52989584 | Msa0506540:intron | 35.0% | |
| TGTTCAATACCATATGCTAC+GGG | - | chr3_4:52989577-52989596 | None:intergenic | 35.0% | |
| CATGATGAAAGATCAGAACT+GGG | - | chr3_4:52989611-52989630 | None:intergenic | 35.0% | |
| !! | CATGCTTAATATTTTTGCCG+AGG | + | chr3_4:52989627-52989646 | Msa0506540:intron | 35.0% |
| !! | AAATGAGTGTTGCTTGACAA+CGG | + | chr3_4:52989840-52989859 | Msa0506540:intron | 35.0% |
| ACTACTGTTTCAGATGACTT+TGG | + | chr3_4:52989922-52989941 | Msa0506540:intron | 35.0% | |
| GTCACAACAATATCAACCAT+TGG | + | chr3_4:52990242-52990261 | Msa0506540:intron | 35.0% | |
| TGTATGGTAAATAGACCCAA+TGG | - | chr3_4:52990261-52990280 | None:intergenic | 35.0% | |
| TTGATTTCATGTTCTGTCCA+GGG | + | chr3_4:52990403-52990422 | Msa0506540:intron | 35.0% | |
| ! | TATGACTATTTTCATTGCCC+TGG | - | chr3_4:52990423-52990442 | None:intergenic | 35.0% |
| ! | ATCAGCGTTTTTCTTTTTCC+AGG | + | chr3_4:52990535-52990554 | Msa0506540:intron | 35.0% |
| ATCATACACCAATGTTCTCA+AGG | + | chr3_4:52990560-52990579 | Msa0506540:CDS | 35.0% | |
| ATTCATCAGGAATCATGCTT+AGG | - | chr3_4:52990653-52990672 | None:intergenic | 35.0% | |
| GAAATAACAAGGACAATACC+AGG | - | chr3_4:52990698-52990717 | None:intergenic | 35.0% | |
| AAGATATTAATGTTGTGCGG+TGG | + | chr3_4:52990823-52990842 | Msa0506540:CDS | 35.0% | |
| AGATATTAATGTTGTGCGGT+GGG | + | chr3_4:52990824-52990843 | Msa0506540:CDS | 35.0% | |
| GTTGCAATCTGGAAAACATA+AGG | + | chr3_4:52990863-52990882 | Msa0506540:CDS | 35.0% | |
| CATAGAAGTCAAGAGCAATA+AGG | + | chr3_4:52990984-52991003 | Msa0506540:intron | 35.0% | |
| TGGTTCTTAGTTTATCTCCT+AGG | + | chr3_4:52991217-52991236 | Msa0506540:intron | 35.0% | |
| GGTTCTTAGTTTATCTCCTA+GGG | + | chr3_4:52991218-52991237 | Msa0506540:intron | 35.0% | |
| TAAGCAGGTGAATACTTTGT+AGG | - | chr3_4:52991484-52991503 | None:intergenic | 35.0% | |
| CCATTCTATACAACATAAGC+AGG | - | chr3_4:52991499-52991518 | None:intergenic | 35.0% | |
| CCTGCTTATGTTGTATAGAA+TGG | + | chr3_4:52991496-52991515 | Msa0506540:intron | 35.0% | |
| TACTGTGTGTGATTCATTAC+AGG | + | chr3_4:52991524-52991543 | Msa0506540:intron | 35.0% | |
| ! | GTCTTCCTAATCCTTTTTGT+AGG | + | chr3_4:52991603-52991622 | Msa0506540:intron | 35.0% |
| TTGTGCCTACAAAAAGGATT+AGG | - | chr3_4:52991611-52991630 | None:intergenic | 35.0% | |
| ! | TAATCCTTTTTGTAGGCACA+AGG | + | chr3_4:52991610-52991629 | Msa0506540:intron | 35.0% |
| ! | AATCCTTTTTGTAGGCACAA+GGG | + | chr3_4:52991611-52991630 | Msa0506540:intron | 35.0% |
| AGAGAGGATATGAGAAAAGT+GGG | - | chr3_4:52991715-52991734 | None:intergenic | 35.0% | |
| TAGAGAGGATATGAGAAAAG+TGG | - | chr3_4:52991716-52991735 | None:intergenic | 35.0% | |
| ! | GTTTTCGGATGTACACAAAA+TGG | - | chr3_4:52991925-52991944 | None:intergenic | 35.0% |
| ! | TTTTGTGTACATCCGAAAAC+AGG | + | chr3_4:52991925-52991944 | Msa0506540:CDS | 35.0% |
| TTATGACGAGACTTTACTGA+TGG | + | chr3_4:52992005-52992024 | Msa0506540:intron | 35.0% | |
| ! | CTCTTTGGAAATTGTCAGAT+AGG | + | chr3_4:52992094-52992113 | Msa0506540:intron | 35.0% |
| GATCGTCTAGCATAATTACT+TGG | + | chr3_4:52992132-52992151 | Msa0506540:intron | 35.0% | |
| AAATTTACCTGGAAAAGGGT+GGG | - | chr3_4:52992261-52992280 | None:intergenic | 35.0% | |
| TAAATTTACCTGGAAAAGGG+TGG | - | chr3_4:52992262-52992281 | None:intergenic | 35.0% | |
| CATTTATTACTTGGAGTAGG+AGG | + | chr3_4:52992365-52992384 | Msa0506540:intron | 35.0% | |
| TTGTCGTGTTGGATAAGAAA+AGG | + | chr3_4:52992425-52992444 | Msa0506540:intron | 35.0% | |
| ACTAACGAAGTTTGCATTCA+GGG | - | chr3_4:52992849-52992868 | None:intergenic | 35.0% | |
| ! | TACATTGTTTGGTAGCAGAA+TGG | + | chr3_4:52993183-52993202 | Msa0506540:intron | 35.0% |
| AGCTGACACTAAAGAATAAG+GGG | - | chr3_4:52993403-52993422 | None:intergenic | 35.0% | |
| !! | ATAGCAGCATCGACATAATT+TGG | - | chr3_4:52993428-52993447 | None:intergenic | 35.0% |
| !! | TTGTTGGTAATGAATACTGC+AGG | + | chr3_4:52993508-52993527 | Msa0506540:intron | 35.0% |
| TAGTGCAATGCACTATTGAT+TGG | + | chr3_4:52993590-52993609 | Msa0506540:exon | 35.0% | |
| !!! | TAGAGCTTTTGAGGTCAAAT+GGG | + | chr3_4:52993618-52993637 | Msa0506540:three_prime_UTR | 35.0% |
| ACTCACAAGAAACAAATCAG+AGG | - | chr3_4:52993718-52993737 | None:intergenic | 35.0% | |
| CATAATATTTCGCTCCATCA+TGG | - | chr3_4:52993853-52993872 | None:intergenic | 35.0% | |
| GTTCTCGCTTGAAATTTGGT+GGG | - | chr3_4:52987001-52987020 | None:intergenic | 40.0% | |
| TGTTCTCGCTTGAAATTTGG+TGG | - | chr3_4:52987002-52987021 | None:intergenic | 40.0% | |
| GAGTGTTCTCGCTTGAAATT+TGG | - | chr3_4:52987005-52987024 | None:intergenic | 40.0% | |
| AAAACCCAGGGATTTCAGTT+AGG | + | chr3_4:52987348-52987367 | Msa0506540:intron | 40.0% | |
| TGATCCTAACTGAAATCCCT+GGG | - | chr3_4:52987355-52987374 | None:intergenic | 40.0% | |
| ATGATCCTAACTGAAATCCC+TGG | - | chr3_4:52987356-52987375 | None:intergenic | 40.0% | |
| !! | TCGTATCGATTTCACGACTT+CGG | + | chr3_4:52987402-52987421 | Msa0506540:intron | 40.0% |
| ! | TGCTTGTACTGGTCCTAAAT+GGG | + | chr3_4:52987558-52987577 | Msa0506540:intron | 40.0% |
| TTGTGGAATTGTTTGGTCCA+TGG | + | chr3_4:52987864-52987883 | Msa0506540:five_prime_UTR | 40.0% | |
| TGTGGAATTGTTTGGTCCAT+GGG | + | chr3_4:52987865-52987884 | Msa0506540:five_prime_UTR | 40.0% | |
| !! | AGTCTGCATACTGATTTGTG+TGG | + | chr3_4:52988225-52988244 | Msa0506540:intron | 40.0% |
| !! | GTCTGCATACTGATTTGTGT+GGG | + | chr3_4:52988226-52988245 | Msa0506540:intron | 40.0% |
| ATTGTAGATGGGAAACATCC+TGG | + | chr3_4:52988258-52988277 | Msa0506540:intron | 40.0% | |
| ! | ATCAGTCCTACTTTGGAAGA+AGG | + | chr3_4:52988286-52988305 | Msa0506540:intron | 40.0% |
| ! | TCAGTCCTACTTTGGAAGAA+GGG | + | chr3_4:52988287-52988306 | Msa0506540:intron | 40.0% |
| !! | CAAGGGCATTGTTGTAAGAT+TGG | - | chr3_4:52988353-52988372 | None:intergenic | 40.0% |
| TAGTGGTCACTAGAAGCAAT+AGG | + | chr3_4:52988526-52988545 | Msa0506540:intron | 40.0% | |
| GATTAGGGGAAAAATGGAAC+TGG | - | chr3_4:52988602-52988621 | None:intergenic | 40.0% | |
| AAAATCAACTCCCTCTCAAC+TGG | - | chr3_4:52988691-52988710 | None:intergenic | 40.0% | |
| ! | TTGATGGCTATGGTCATCAA+TGG | - | chr3_4:52988892-52988911 | None:intergenic | 40.0% |
| ! | GTGATTGATTCTTCCTTGAG+AGG | + | chr3_4:52988913-52988932 | Msa0506540:CDS | 40.0% |
| ACGCAAATTACTACCTCTCA+AGG | - | chr3_4:52988929-52988948 | None:intergenic | 40.0% | |
| CTCATGTGGATCTCAAACTT+TGG | - | chr3_4:52989154-52989173 | None:intergenic | 40.0% | |
| GAGTGCTATGAAAACTCATG+TGG | - | chr3_4:52989168-52989187 | None:intergenic | 40.0% | |
| GAGCTGTAGTGTGTACATTT+CGG | + | chr3_4:52989418-52989437 | Msa0506540:intron | 40.0% | |
| GCATGATGAAAGATCAGAAC+TGG | - | chr3_4:52989612-52989631 | None:intergenic | 40.0% | |
| CTTCATTCCTTGTGATCTTC+AGG | + | chr3_4:52989667-52989686 | Msa0506540:intron | 40.0% | |
| ATCTGATCCTGAAGATCACA+AGG | - | chr3_4:52989677-52989696 | None:intergenic | 40.0% | |
| GATGGTTAAAATACCCTGGA+AGG | + | chr3_4:52989713-52989732 | Msa0506540:intron | 40.0% | |
| CATTACTCTACAACCTTCCA+GGG | - | chr3_4:52989729-52989748 | None:intergenic | 40.0% | |
| ACATTACTCTACAACCTTCC+AGG | - | chr3_4:52989730-52989749 | None:intergenic | 40.0% | |
| AAGATATCAGTGACATTGGG+TGG | - | chr3_4:52989881-52989900 | None:intergenic | 40.0% | |
| !! | ACGAAGAGGTGTTCATTGTT+GGG | + | chr3_4:52989975-52989994 | Msa0506540:CDS | 40.0% |
| TTCATTGTTGGGTGTGTGAT+GGG | + | chr3_4:52989986-52990005 | Msa0506540:CDS | 40.0% | |
| !! | AACAACTAGTGGGTTTGTCA+AGG | + | chr3_4:52990178-52990197 | Msa0506540:intron | 40.0% |
| GTTTGTCAAGGACTAGGATT+TGG | + | chr3_4:52990190-52990209 | Msa0506540:intron | 40.0% | |
| ! | GTTGATTTCATGTTCTGTCC+AGG | + | chr3_4:52990402-52990421 | Msa0506540:intron | 40.0% |
| AACATTGGTGTATGATGTCC+TGG | - | chr3_4:52990556-52990575 | None:intergenic | 40.0% | |
| TCAAAACTTACTCGCTACTG+AGG | + | chr3_4:52990611-52990630 | Msa0506540:CDS | 40.0% | |
| ! | AGCTGTTGCTTCTGAACTTA+GGG | + | chr3_4:52990761-52990780 | Msa0506540:intron | 40.0% |
| CTTCTGAACTTAGGGGAAAA+TGG | + | chr3_4:52990769-52990788 | Msa0506540:CDS | 40.0% | |
| TAGTTTATCTCCTAGGGTCT+AGG | + | chr3_4:52991224-52991243 | Msa0506540:intron | 40.0% | |
| AGTTTATCTCCTAGGGTCTA+GGG | + | chr3_4:52991225-52991244 | Msa0506540:intron | 40.0% | |
| TGGCATGAAAGATCATAGAG+AGG | - | chr3_4:52991731-52991750 | None:intergenic | 40.0% | |
| GTGTTCCTATTGACCCAAAT+CGG | + | chr3_4:52992208-52992227 | Msa0506540:CDS | 40.0% | |
| TTGAGAGCTGATGTTAATGG+TGG | + | chr3_4:52992584-52992603 | Msa0506540:CDS | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | + | chr3_4:52992803-52992822 | Msa0506540:intron | 40.0% |
| GACTAACGAAGTTTGCATTC+AGG | - | chr3_4:52992850-52992869 | None:intergenic | 40.0% | |
| ACTAACGGAGTCTACATTCA+GGG | - | chr3_4:52992881-52992900 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | - | chr3_4:52992986-52993005 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr3_4:52992803-52992822 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr3_4:52992802-52992821 | None:intergenic | 40.0% |
| CATTAGAAGATATGAGGGGA+TGG | - | chr3_4:52993130-52993149 | None:intergenic | 40.0% | |
| AAGCGTAACTGAGTTTCCAA+GGG | - | chr3_4:52993219-52993238 | None:intergenic | 40.0% | |
| AAAGCGTAACTGAGTTTCCA+AGG | - | chr3_4:52993220-52993239 | None:intergenic | 40.0% | |
| !! | TTGGTAATGAATACTGCAGG+AGG | + | chr3_4:52993511-52993530 | Msa0506540:intron | 40.0% |
| AGTCAAAGAACTCCATAGGT+TGG | + | chr3_4:52993567-52993586 | Msa0506540:CDS | 40.0% | |
| ! | TTGGTCATGTAGAGCTTTTG+AGG | + | chr3_4:52993609-52993628 | Msa0506540:three_prime_UTR | 40.0% |
| !!! | GTAGAGCTTTTGAGGTCAAA+TGG | + | chr3_4:52993617-52993636 | Msa0506540:three_prime_UTR | 40.0% |
| !!! | AGAGCTTTTGAGGTCAAATG+GGG | + | chr3_4:52993619-52993638 | Msa0506540:three_prime_UTR | 40.0% |
| ! | ATTTTGCCTCCATTCCATGA+TGG | + | chr3_4:52993836-52993855 | Msa0506540:three_prime_UTR | 40.0% |
| TATTTCGCTCCATCATGGAA+TGG | - | chr3_4:52993848-52993867 | None:intergenic | 40.0% | |
| CTCAGTTCTCACTCACTCTA+AGG | + | chr3_4:52987040-52987059 | Msa0506540:five_prime_UTR | 45.0% | |
| !! | CGTATCGATTTCACGACTTC+GGG | + | chr3_4:52987403-52987422 | Msa0506540:intron | 45.0% |
| ! | CATTTAGGACCAGTACAAGC+AGG | - | chr3_4:52987559-52987578 | None:intergenic | 45.0% |
| ! | CTGCTTGTACTGGTCCTAAA+TGG | + | chr3_4:52987557-52987576 | Msa0506540:intron | 45.0% |
| ! | TGTACTGGTCCTAAATGGGT+CGG | + | chr3_4:52987562-52987581 | Msa0506540:intron | 45.0% |
| GCATAAGGAAACAGCTTTCC+TGG | - | chr3_4:52988130-52988149 | None:intergenic | 45.0% | |
| !! | GATGGAGTTTTCGAGCTCAA+GGG | - | chr3_4:52988370-52988389 | None:intergenic | 45.0% |
| !! | TGATGGAGTTTTCGAGCTCA+AGG | - | chr3_4:52988371-52988390 | None:intergenic | 45.0% |
| ! | GTTACATCGACTGTGTAGAC+AGG | - | chr3_4:52988426-52988445 | None:intergenic | 45.0% |
| ATGTGGTTCAGCCTGCAAAA+AGG | + | chr3_4:52988629-52988648 | Msa0506540:intron | 45.0% | |
| ATGTCTTCACTCCAGTTGAG+AGG | + | chr3_4:52988677-52988696 | Msa0506540:CDS | 45.0% | |
| TGTCTTCACTCCAGTTGAGA+GGG | + | chr3_4:52988678-52988697 | Msa0506540:CDS | 45.0% | |
| TGATGTCAGATACTGCTGCA+AGG | + | chr3_4:52988840-52988859 | Msa0506540:CDS | 45.0% | |
| GATGTCAGATACTGCTGCAA+GGG | + | chr3_4:52988841-52988860 | Msa0506540:CDS | 45.0% | |
| CTGATGTTTGCTTGGATTGC+TGG | + | chr3_4:52988866-52988885 | Msa0506540:CDS | 45.0% | |
| ! | TGGGTCTCGTCACTTTATGT+GGG | + | chr3_4:52989119-52989138 | Msa0506540:intron | 45.0% |
| AAGTAGACACAGTCACCTAG+TGG | + | chr3_4:52989216-52989235 | Msa0506540:intron | 45.0% | |
| TATTGCGTGTGGTCATTCCT+TGG | + | chr3_4:52989318-52989337 | Msa0506540:intron | 45.0% | |
| GGCAGAGTAAACTTATGCCA+AGG | - | chr3_4:52989338-52989357 | None:intergenic | 45.0% | |
| CCTAGCAACAACAGTGATTC+AGG | - | chr3_4:52989455-52989474 | None:intergenic | 45.0% | |
| CCTGAATCACTGTTGTTGCT+AGG | + | chr3_4:52989452-52989471 | Msa0506540:intron | 45.0% | |
| TTGGCTTCAAGCACATACTC+TGG | + | chr3_4:52989941-52989960 | Msa0506540:CDS | 45.0% | |
| TGGCTTCAAGCACATACTCT+GGG | + | chr3_4:52989942-52989961 | Msa0506540:CDS | 45.0% | |
| CACATACTCTGGGTCTATAG+TGG | + | chr3_4:52989952-52989971 | Msa0506540:CDS | 45.0% | |
| !! | GACGAAGAGGTGTTCATTGT+TGG | + | chr3_4:52989974-52989993 | Msa0506540:CDS | 45.0% |
| GTTCATTGTTGGGTGTGTGA+TGG | + | chr3_4:52989985-52990004 | Msa0506540:CDS | 45.0% | |
| !! | TAGTGGGTTTGTCAAGGACT+AGG | + | chr3_4:52990184-52990203 | Msa0506540:intron | 45.0% |
| TGCTGCTCTTCATCCTTTCT+TGG | + | chr3_4:52990462-52990481 | Msa0506540:CDS | 45.0% | |
| CTCAAGACTTACGCCAAGAA+AGG | - | chr3_4:52990478-52990497 | None:intergenic | 45.0% | |
| TTCAGAAGCAACAGCTGCAA+AGG | - | chr3_4:52990757-52990776 | None:intergenic | 45.0% | |
| ! | CAGCTGTTGCTTCTGAACTT+AGG | + | chr3_4:52990760-52990779 | Msa0506540:intron | 45.0% |
| ! | GCTGTTGCTTCTGAACTTAG+GGG | + | chr3_4:52990762-52990781 | Msa0506540:intron | 45.0% |
| GGGGAAAATGGCAAGACAAT+AGG | + | chr3_4:52990781-52990800 | Msa0506540:CDS | 45.0% | |
| TGCAAGCAGTTGTTGCAATC+TGG | + | chr3_4:52990852-52990871 | Msa0506540:CDS | 45.0% | |
| AAGAGCAATAAGGGCCTGTT+TGG | + | chr3_4:52990994-52991013 | Msa0506540:intron | 45.0% | |
| CAACCCTTGTGCCTACAAAA+AGG | - | chr3_4:52991617-52991636 | None:intergenic | 45.0% | |
| TGTTCTGCTATACTTACCCC+AGG | + | chr3_4:52991659-52991678 | Msa0506540:CDS | 45.0% | |
| TACTTACCCCAGGCTAGATA+TGG | + | chr3_4:52991669-52991688 | Msa0506540:CDS | 45.0% | |
| ATGCAAAGACTTGAGCCAGA+GGG | - | chr3_4:52992324-52992343 | None:intergenic | 45.0% | |
| TATGCAAAGACTTGAGCCAG+AGG | - | chr3_4:52992325-52992344 | None:intergenic | 45.0% | |
| GGCTTGAGAGCTGATGTTAA+TGG | + | chr3_4:52992581-52992600 | Msa0506540:CDS | 45.0% | |
| ACTTTAGTCCCTGAATCGGA+AGG | + | chr3_4:52992807-52992826 | Msa0506540:intron | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | + | chr3_4:52992808-52992827 | Msa0506540:intron | 45.0% | |
| GACTAACGGAGTCTACATTC+AGG | - | chr3_4:52992882-52992901 | None:intergenic | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr3_4:52992909-52992928 | Msa0506540:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr3_4:52992913-52992932 | None:intergenic | 45.0% | |
| ATTGCAAAACAGTCCCTGCA+TGG | - | chr3_4:52992925-52992944 | None:intergenic | 45.0% | |
| ATGAGGGGATGGCAATGAAA+AGG | - | chr3_4:52993119-52993138 | None:intergenic | 45.0% | |
| ! | TGTTTGGTAGCAGAATGGAG+TGG | + | chr3_4:52993188-52993207 | Msa0506540:intron | 45.0% |
| ACCTTTGCAAAAAGCCTGCA+AGG | + | chr3_4:52993259-52993278 | Msa0506540:CDS | 45.0% | |
| ! | ACCTTGCAGGCTTTTTGCAA+AGG | - | chr3_4:52993263-52993282 | None:intergenic | 45.0% |
| TACTGCAGGAGGAGATAGAA+AGG | + | chr3_4:52993522-52993541 | Msa0506540:intron | 45.0% | |
| CAGCAGTCAAAGAACTCCAT+AGG | + | chr3_4:52993563-52993582 | Msa0506540:CDS | 45.0% | |
| TGCATTGCACTACCAACCTA+TGG | - | chr3_4:52993582-52993601 | None:intergenic | 45.0% | |
| !!! | TCTTTTTTTTTTTTTTTTTT+TGG | - | chr3_4:52990307-52990326 | None:intergenic | 5.0% |
| !! | AGCAGGCATCGGGTTTCATT+AGG | - | chr3_4:52987542-52987561 | None:intergenic | 50.0% |
| TTGGTCCATGGGAAGCAGTA+AGG | + | chr3_4:52987876-52987895 | Msa0506540:five_prime_UTR | 50.0% | |
| GGATGTCTTATGGCAACGGT+AGG | + | chr3_4:52988164-52988183 | Msa0506540:CDS | 50.0% | |
| AAGTAGGACTGATCACAGCC+AGG | - | chr3_4:52988279-52988298 | None:intergenic | 50.0% | |
| GGCTGTGATCAGTCCTACTT+TGG | + | chr3_4:52988279-52988298 | Msa0506540:intron | 50.0% | |
| ! | GCATAGGCATGCCTTTTTGC+AGG | - | chr3_4:52988643-52988662 | None:intergenic | 50.0% |
| ! | TCTCTTTCATGGTCGGCTCT+AGG | + | chr3_4:52988801-52988820 | Msa0506540:intron | 50.0% |
| !! | CAAGGGTGCTGATGTTTGCT+TGG | + | chr3_4:52988858-52988877 | Msa0506540:CDS | 50.0% |
| ! | GTGGGTCTCGTCACTTTATG+TGG | + | chr3_4:52989118-52989137 | Msa0506540:intron | 50.0% |
| ! | GGGTCTCGTCACTTTATGTG+GGG | + | chr3_4:52989120-52989139 | Msa0506540:intron | 50.0% |
| !! | TGGGTCTATAGTGGACGAAG+AGG | + | chr3_4:52989961-52989980 | Msa0506540:CDS | 50.0% |
| ! | TTGTTGGGTGTGTGATGGGA+AGG | + | chr3_4:52989990-52990009 | Msa0506540:CDS | 50.0% |
| ! | TGTGTGATGGGAAGGCTAGA+AGG | + | chr3_4:52989998-52990017 | Msa0506540:CDS | 50.0% |
| !! | CTAGGATTTGGTGCAGTCGA+TGG | + | chr3_4:52990202-52990221 | Msa0506540:intron | 50.0% |
| CAAGTAGGGTCCGTTTGGAT+TGG | - | chr3_4:52991199-52991218 | None:intergenic | 50.0% | |
| CAATCCAAACGGACCCTACT+TGG | + | chr3_4:52991197-52991216 | Msa0506540:intron | 50.0% | |
| AGAACCAAGTAGGGTCCGTT+TGG | - | chr3_4:52991204-52991223 | None:intergenic | 50.0% | |
| TTACCCCAGGCTAGATATGG+AGG | + | chr3_4:52991672-52991691 | Msa0506540:CDS | 50.0% | |
| AGACCTCCATATCTAGCCTG+GGG | - | chr3_4:52991678-52991697 | None:intergenic | 50.0% | |
| CAGACCTCCATATCTAGCCT+GGG | - | chr3_4:52991679-52991698 | None:intergenic | 50.0% | |
| ACAGACCTCCATATCTAGCC+TGG | - | chr3_4:52991680-52991699 | None:intergenic | 50.0% | |
| !! | TCGCACCGATTTGGGTCAAT+AGG | - | chr3_4:52992216-52992235 | None:intergenic | 50.0% |
| !! | CAAACTCGTCGCACCGATTT+GGG | - | chr3_4:52992224-52992243 | None:intergenic | 50.0% |
| !! | TCAAACTCGTCGCACCGATT+TGG | - | chr3_4:52992225-52992244 | None:intergenic | 50.0% |
| ! | AAAAGGGTGGGTACTGTGGT+AGG | - | chr3_4:52992249-52992268 | None:intergenic | 50.0% |
| GACGAATCCCTTCCGATTCA+GGG | - | chr3_4:52992818-52992837 | None:intergenic | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | - | chr3_4:52992819-52992838 | None:intergenic | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr3_4:52992908-52992927 | Msa0506540:intron | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr3_4:52992914-52992933 | None:intergenic | 50.0% | |
| TGACGAATCCTCTCCCATTC+AGG | + | chr3_4:52992968-52992987 | Msa0506540:intron | 50.0% | |
| GACGAATCCTCTCCCATTCA+GGG | + | chr3_4:52992969-52992988 | Msa0506540:intron | 50.0% | |
| CTTTAGTCCCTGAATGGGAG+AGG | - | chr3_4:52992979-52992998 | None:intergenic | 50.0% | |
| GAATGGAGTGGAACTTCCCT+TGG | + | chr3_4:52993200-52993219 | Msa0506540:intron | 50.0% | |
| TTCGCTCCATCATGGAATGG+AGG | - | chr3_4:52993845-52993864 | None:intergenic | 50.0% | |
| AACCCGATGCCTGCTTGTAC+TGG | + | chr3_4:52987547-52987566 | Msa0506540:intron | 55.0% | |
| GACCAGTACAAGCAGGCATC+GGG | - | chr3_4:52987552-52987571 | None:intergenic | 55.0% | |
| GGACCAGTACAAGCAGGCAT+CGG | - | chr3_4:52987553-52987572 | None:intergenic | 55.0% | |
| TCCTAAATGGGTCGGCATCC+TGG | + | chr3_4:52987570-52987589 | Msa0506540:intron | 55.0% | |
| ACCAGGATGCCGACCCATTT+AGG | - | chr3_4:52987574-52987593 | None:intergenic | 55.0% | |
| CAGTAAGGCCGAGACATCTG+AGG | + | chr3_4:52987891-52987910 | Msa0506540:five_prime_UTR | 55.0% | |
| AGAAACTGGCCCTAGACCCT+AGG | - | chr3_4:52991237-52991256 | None:intergenic | 55.0% | |
| ! | CTGGAAAAGGGTGGGTACTG+TGG | - | chr3_4:52992253-52992272 | None:intergenic | 55.0% |
| ! | CACAGTACCCACCCTTTTCC+AGG | + | chr3_4:52992251-52992270 | Msa0506540:CDS | 55.0% |
| GCAACAGAGATGGTTCCCTC+TGG | + | chr3_4:52992306-52992325 | Msa0506540:intron | 55.0% | |
| CTCGGCCTTACTGCTTCCCA+TGG | - | chr3_4:52987884-52987903 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52986947 | 52994010 | 52986947 | ID=Msa0506540;Name=Msa0506540 |
| chr3_4 | mRNA | 52986947 | 52994010 | 52986947 | ID=Msa0506540-mRNA-1;Parent=Msa0506540;Name=Msa0506540-mRNA-1;_AED=0.19;_eAED=0.19;_QI=207|0.93|0.94|1|0.87|0.76|17|397|389 |
| chr3_4 | exon | 52986947 | 52987061 | 52986947 | ID=Msa0506540-mRNA-1:exon:11684;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52987856 | 52988002 | 52987856 | ID=Msa0506540-mRNA-1:exon:11685;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52988131 | 52988225 | 52988131 | ID=Msa0506540-mRNA-1:exon:11686;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52988640 | 52988717 | 52988640 | ID=Msa0506540-mRNA-1:exon:11687;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52988823 | 52988934 | 52988823 | ID=Msa0506540-mRNA-1:exon:11688;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52989935 | 52990019 | 52989935 | ID=Msa0506540-mRNA-1:exon:11689;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52990112 | 52990163 | 52990112 | ID=Msa0506540-mRNA-1:exon:11690;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52990424 | 52990485 | 52990424 | ID=Msa0506540-mRNA-1:exon:11691;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52990557 | 52990672 | 52990557 | ID=Msa0506540-mRNA-1:exon:11692;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52990763 | 52990884 | 52990763 | ID=Msa0506540-mRNA-1:exon:11693;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52991625 | 52991693 | 52991625 | ID=Msa0506540-mRNA-1:exon:11694;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52991889 | 52991946 | 52991889 | ID=Msa0506540-mRNA-1:exon:11695;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52992199 | 52992272 | 52992199 | ID=Msa0506540-mRNA-1:exon:11696;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52992557 | 52992605 | 52992557 | ID=Msa0506540-mRNA-1:exon:11697;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52993201 | 52993280 | 52993201 | ID=Msa0506540-mRNA-1:exon:11698;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52993530 | 52993943 | 52993530 | ID=Msa0506540-mRNA-1:exon:11699;Parent=Msa0506540-mRNA-1 |
| chr3_4 | exon | 52993965 | 52994010 | 52993965 | ID=Msa0506540-mRNA-1:exon:11700;Parent=Msa0506540-mRNA-1 |
| chr3_4 | five_prime_UTR | 52986947 | 52987061 | 52986947 | ID=Msa0506540-mRNA-1:five_prime_utr;Parent=Msa0506540-mRNA-1 |
| chr3_4 | five_prime_UTR | 52987856 | 52987947 | 52987856 | ID=Msa0506540-mRNA-1:five_prime_utr;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52987948 | 52988002 | 52987948 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52988131 | 52988225 | 52988131 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52988640 | 52988717 | 52988640 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52988823 | 52988934 | 52988823 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52989935 | 52990019 | 52989935 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52990112 | 52990163 | 52990112 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52990424 | 52990485 | 52990424 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52990557 | 52990672 | 52990557 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52990763 | 52990884 | 52990763 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52991625 | 52991693 | 52991625 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52991889 | 52991946 | 52991889 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52992199 | 52992272 | 52992199 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52992557 | 52992605 | 52992557 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52993201 | 52993280 | 52993201 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | CDS | 52993530 | 52993592 | 52993530 | ID=Msa0506540-mRNA-1:cds;Parent=Msa0506540-mRNA-1 |
| chr3_4 | three_prime_UTR | 52993593 | 52993943 | 52993593 | ID=Msa0506540-mRNA-1:three_prime_utr;Parent=Msa0506540-mRNA-1 |
| chr3_4 | three_prime_UTR | 52993965 | 52994010 | 52993965 | ID=Msa0506540-mRNA-1:three_prime_utr;Parent=Msa0506540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
