Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320290 | KYP58465.1 | 100.000 | 136 | 0 | 0 | 1 | 136 | 5 | 140 | 1.76e-92 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320290 | sp|P68428|H32_WHEAT | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 5.15e-95 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320290 | A0A1D1ZGP1 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.97e-92 | 272 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0320290 | 0.800511 | 1.392788e-48 | -8.615850e-47 |
| Msa0030070 | Msa0320290 | 0.876975 | 9.100554e-69 | -8.615850e-47 |
| Msa0030690 | Msa0320290 | 0.802854 | 4.604033e-49 | -8.615850e-47 |
| Msa0032230 | Msa0320290 | 0.813742 | 2.193734e-51 | -8.615850e-47 |
| Msa0050530 | Msa0320290 | 0.819752 | 9.848980e-53 | -8.615850e-47 |
| Msa0067380 | Msa0320290 | 0.811704 | 6.127346e-51 | -8.615850e-47 |
| Msa0090440 | Msa0320290 | 0.823631 | 1.248043e-53 | -8.615850e-47 |
| Msa0091350 | Msa0320290 | 0.828946 | 6.775645e-55 | -8.615850e-47 |
| Msa0100600 | Msa0320290 | 0.820148 | 7.991704e-53 | -8.615850e-47 |
| Msa0100890 | Msa0320290 | 0.811618 | 6.397569e-51 | -8.615850e-47 |
| Msa0113410 | Msa0320290 | 0.820028 | 8.515536e-53 | -8.615850e-47 |
| Msa0125590 | Msa0320290 | 0.870061 | 1.939795e-66 | -8.615850e-47 |
| Msa0127270 | Msa0320290 | 0.818060 | 2.386817e-52 | -8.615850e-47 |
| Msa0127340 | Msa0320290 | 0.835228 | 1.896132e-56 | -8.615850e-47 |
| Msa0156050 | Msa0320290 | 0.801681 | 8.027646e-49 | -8.615850e-47 |
| Msa0158900 | Msa0320290 | 0.811711 | 6.106297e-51 | -8.615850e-47 |
| Msa0165830 | Msa0320290 | 0.807605 | 4.659598e-50 | -8.615850e-47 |
| Msa0170070 | Msa0320290 | 0.860738 | 1.674775e-63 | -8.615850e-47 |
| Msa0186180 | Msa0320290 | 0.852909 | 3.387184e-61 | -8.615850e-47 |
| Msa0204970 | Msa0320290 | 0.844724 | 6.330768e-59 | -8.615850e-47 |
| Msa0225800 | Msa0320290 | 0.813173 | 2.926951e-51 | -8.615850e-47 |
| Msa0249870 | Msa0320290 | 0.838768 | 2.362941e-57 | -8.615850e-47 |
| Msa0260630 | Msa0320290 | 0.812954 | 3.268439e-51 | -8.615850e-47 |
| Msa0281540 | Msa0320290 | 0.828644 | 8.018386e-55 | -8.615850e-47 |
| Msa0320250 | Msa0320290 | 0.996830 | 7.753177e-233 | -8.615850e-47 |
| Msa0320270 | Msa0320290 | 0.996447 | 1.203613e-227 | -8.615850e-47 |
| Msa0320290 | Msa0320580 | 0.840009 | 1.125246e-57 | -8.615850e-47 |
| Msa0320290 | Msa0341680 | 0.801953 | 7.060394e-49 | -8.615850e-47 |
| Msa0320290 | Msa0344110 | 0.842045 | 3.286117e-58 | -8.615850e-47 |
| Msa0320290 | Msa0364680 | 0.811556 | 6.598458e-51 | -8.615850e-47 |
| Msa0320290 | Msa0373170 | 0.855879 | 4.690498e-62 | -8.615850e-47 |
| Msa0320290 | Msa0382230 | 0.821436 | 4.041993e-53 | -8.615850e-47 |
| Msa0320290 | Msa0383940 | 0.809707 | 1.656134e-50 | -8.615850e-47 |
| Msa0320290 | Msa0412130 | 0.840704 | 7.406482e-58 | -8.615850e-47 |
| Msa0320290 | Msa0415820 | 0.836736 | 7.858514e-57 | -8.615850e-47 |
| Msa0320290 | Msa0416210 | 0.810931 | 9.018975e-51 | -8.615850e-47 |
| Msa0320290 | Msa0420430 | 0.803011 | 4.272613e-49 | -8.615850e-47 |
| Msa0320290 | Msa0420670 | 0.813729 | 2.208598e-51 | -8.615850e-47 |
| Msa0320290 | Msa0421130 | 0.806175 | 9.346951e-50 | -8.615850e-47 |
| Msa0320290 | Msa0421750 | 0.843170 | 1.651684e-58 | -8.615850e-47 |
| Msa0320290 | Msa0433630 | 0.802937 | 4.425690e-49 | -8.615850e-47 |
| Msa0320290 | Msa0433760 | 0.854010 | 1.635758e-61 | -8.615850e-47 |
| Msa0320290 | Msa0434360 | 0.826004 | 3.441947e-54 | -8.615850e-47 |
| Msa0320290 | Msa0456670 | 0.838790 | 2.332655e-57 | -8.615850e-47 |
| Msa0320290 | Msa0461550 | 0.813221 | 2.856953e-51 | -8.615850e-47 |
| Msa0320290 | Msa0466520 | 0.816932 | 4.284667e-52 | -8.615850e-47 |
| Msa0320290 | Msa0467690 | 0.852659 | 3.994032e-61 | -8.615850e-47 |
| Msa0320290 | Msa0477630 | 0.842619 | 2.315701e-58 | -8.615850e-47 |
| Msa0320290 | Msa0478140 | 0.836612 | 8.449219e-57 | -8.615850e-47 |
| Msa0320290 | Msa0478200 | 0.832700 | 8.138009e-56 | -8.615850e-47 |
| Msa0320290 | Msa0503990 | 0.847898 | 8.642797e-60 | -8.615850e-47 |
| Msa0320290 | Msa0506540 | 0.825178 | 5.401923e-54 | -8.615850e-47 |
| Msa0320290 | Msa0506880 | 0.848033 | 7.932054e-60 | -8.615850e-47 |
| Msa0320290 | Msa0507020 | 0.809718 | 1.647356e-50 | -8.615850e-47 |
| Msa0320290 | Msa0507810 | 0.853759 | 1.932387e-61 | -8.615850e-47 |
| Msa0320290 | Msa0507820 | 0.826072 | 3.315670e-54 | -8.615850e-47 |
| Msa0320290 | Msa0507920 | 0.851305 | 9.674803e-61 | -8.615850e-47 |
| Msa0320290 | Msa0512530 | 0.814698 | 1.349515e-51 | -8.615850e-47 |
| Msa0320290 | Msa0513080 | 0.802014 | 6.859601e-49 | -8.615850e-47 |
| Msa0320290 | Msa0514020 | 0.849439 | 3.232010e-60 | -8.615850e-47 |
| Msa0320290 | Msa0520680 | 0.821691 | 3.529581e-53 | -8.615850e-47 |
| Msa0320290 | Msa0521680 | 0.837837 | 4.106835e-57 | -8.615850e-47 |
| Msa0320290 | Msa0523380 | 0.806824 | 6.817702e-50 | -8.615850e-47 |
| Msa0320290 | Msa0527850 | 0.840789 | 7.037492e-58 | -8.615850e-47 |
| Msa0320290 | Msa0541740 | 0.837136 | 6.209880e-57 | -8.615850e-47 |
| Msa0320290 | Msa0544410 | 0.852524 | 4.363120e-61 | -8.615850e-47 |
| Msa0320290 | Msa0548000 | 0.867522 | 1.286820e-65 | -8.615850e-47 |
| Msa0320290 | Msa0550590 | 0.815473 | 9.081866e-52 | -8.615850e-47 |
| Msa0320290 | Msa0554300 | 0.848096 | 7.621531e-60 | -8.615850e-47 |
| Msa0320290 | Msa0561560 | 0.819888 | 9.164831e-53 | -8.615850e-47 |
| Msa0320290 | Msa0572830 | 0.833616 | 4.815702e-56 | -8.615850e-47 |
| Msa0320290 | Msa0575710 | 0.809244 | 2.082023e-50 | -8.615850e-47 |
| Msa0320290 | Msa0582460 | 0.836702 | 8.017637e-57 | -8.615850e-47 |
| Msa0320290 | Msa0584530 | 0.824654 | 7.179381e-54 | -8.615850e-47 |
| Msa0320290 | Msa0586200 | 0.843639 | 1.238511e-58 | -8.615850e-47 |
| Msa0320290 | Msa0603410 | 0.834395 | 3.072186e-56 | -8.615850e-47 |
| Msa0320290 | Msa0608350 | 0.809941 | 1.475429e-50 | -8.615850e-47 |
| Msa0320290 | Msa0612410 | 0.828162 | 1.047842e-54 | -8.615850e-47 |
| Msa0320290 | Msa0620500 | 0.828833 | 7.216939e-55 | -8.615850e-47 |
| Msa0320290 | Msa0625620 | 0.839271 | 1.750722e-57 | -8.615850e-47 |
| Msa0320290 | Msa0640800 | 0.863022 | 3.347394e-64 | -8.615850e-47 |
| Msa0320290 | Msa0645340 | 0.839175 | 1.854326e-57 | -8.615850e-47 |
| Msa0320290 | Msa0647440 | 0.831281 | 1.824367e-55 | -8.615850e-47 |
| Msa0320290 | Msa0648760 | 0.849918 | 2.374425e-60 | -8.615850e-47 |
| Msa0320290 | Msa0653160 | 0.820558 | 6.438875e-53 | -8.615850e-47 |
| Msa0320290 | Msa0657210 | 0.815517 | 8.876093e-52 | -8.615850e-47 |
| Msa0320290 | Msa0659200 | 0.865494 | 5.669539e-65 | -8.615850e-47 |
| Msa0320290 | Msa0663290 | 0.802534 | 5.361105e-49 | -8.615850e-47 |
| Msa0320290 | Msa0664070 | 0.810858 | 9.351921e-51 | -8.615850e-47 |
| Msa0320290 | Msa0684750 | 0.810251 | 1.264924e-50 | -8.615850e-47 |
| Msa0320290 | Msa0688620 | 0.846929 | 1.594918e-59 | -8.615850e-47 |
| Msa0320290 | Msa0690320 | 0.837243 | 5.832417e-57 | -8.615850e-47 |
| Msa0320290 | Msa0691270 | 0.818612 | 1.789621e-52 | -8.615850e-47 |
| Msa0320290 | Msa0701250 | 0.834228 | 3.383619e-56 | -8.615850e-47 |
| Msa0320290 | Msa0705140 | 0.809670 | 1.686783e-50 | -8.615850e-47 |
| Msa0320290 | Msa0705180 | 0.868535 | 6.074360e-66 | -8.615850e-47 |
| Msa0320290 | Msa0707260 | 0.803240 | 3.831562e-49 | -8.615850e-47 |
| Msa0320290 | Msa0717900 | 0.838666 | 2.511379e-57 | -8.615850e-47 |
| Msa0320290 | Msa0718040 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
| Msa0320290 | Msa0720280 | 0.883750 | 3.443331e-71 | -8.615850e-47 |
| Msa0320290 | Msa0737130 | 0.809782 | 1.596032e-50 | -8.615850e-47 |
| Msa0320290 | Msa0737140 | 0.837477 | 5.080717e-57 | -8.615850e-47 |
| Msa0320290 | Msa0749190 | 0.841611 | 4.277136e-58 | -8.615850e-47 |
| Msa0320290 | Msa0750520 | 0.849006 | 4.265244e-60 | -8.615850e-47 |
| Msa0320290 | Msa0778600 | 0.806486 | 8.037476e-50 | -8.615850e-47 |
| Msa0320290 | Msa0803140 | 0.886017 | 4.930900e-72 | -8.615850e-47 |
| Msa0320290 | Msa0816080 | 0.831171 | 1.941932e-55 | -8.615850e-47 |
| Msa0320290 | Msa0816230 | 0.829032 | 6.457683e-55 | -8.615850e-47 |
| Msa0320290 | Msa0837680 | 0.814437 | 1.541274e-51 | -8.615850e-47 |
| Msa0320290 | Msa0841500 | 0.896925 | 2.307944e-76 | -8.615850e-47 |
| Msa0320290 | Msa0856610 | 0.829022 | 6.495283e-55 | -8.615850e-47 |
| Msa0320290 | Msa0861440 | 0.808842 | 2.539536e-50 | -8.615850e-47 |
| Msa0320290 | Msa0900090 | 0.823661 | 1.228464e-53 | -8.615850e-47 |
| Msa0320290 | Msa0909760 | 0.836373 | 9.722587e-57 | -8.615850e-47 |
| Msa0320290 | Msa0929900 | 0.810423 | 1.161403e-50 | -8.615850e-47 |
| Msa0320290 | Msa0930040 | 0.809849 | 1.544218e-50 | -8.615850e-47 |
| Msa0320290 | Msa0965470 | 0.817376 | 3.404971e-52 | -8.615850e-47 |
| Msa0320290 | Msa0966710 | 0.803142 | 4.014886e-49 | -8.615850e-47 |
| Msa0320290 | Msa1000780 | 0.816135 | 6.463502e-52 | -8.615850e-47 |
| Msa0320290 | Msa1008670 | 0.850521 | 1.608980e-60 | -8.615850e-47 |
| Msa0320290 | Msa1008680 | 0.802576 | 5.253877e-49 | -8.615850e-47 |
| Msa0320290 | Msa1018960 | 0.856098 | 4.046614e-62 | -8.615850e-47 |
| Msa0320290 | Msa1033920 | 0.824125 | 9.561761e-54 | -8.615850e-47 |
| Msa0320290 | Msa1039380 | 0.820731 | 5.873308e-53 | -8.615850e-47 |
| Msa0320290 | Msa1060900 | 0.813093 | 3.047895e-51 | -8.615850e-47 |
| Msa0320290 | Msa1071410 | 0.847615 | 1.033651e-59 | -8.615850e-47 |
| Msa0320290 | Msa1078860 | 0.815752 | 7.870123e-52 | -8.615850e-47 |
| Msa0320290 | Msa1078990 | 0.816292 | 5.963011e-52 | -8.615850e-47 |
| Msa0320290 | Msa1082380 | 0.817671 | 2.922031e-52 | -8.615850e-47 |
| Msa0320290 | Msa1098060 | 0.804348 | 2.255756e-49 | -8.615850e-47 |
| Msa0320290 | Msa1106220 | 0.810824 | 9.514080e-51 | -8.615850e-47 |
| Msa0320290 | Msa1126620 | 0.806950 | 6.413572e-50 | -8.615850e-47 |
| Msa0320290 | Msa1144990 | 0.837192 | 6.008356e-57 | -8.615850e-47 |
| Msa0320290 | Msa1147560 | 0.870689 | 1.206921e-66 | -8.615850e-47 |
| Msa0320290 | Msa1162880 | 0.848714 | 5.138969e-60 | -8.615850e-47 |
| Msa0320290 | Msa1163180 | 0.805436 | 1.336277e-49 | -8.615850e-47 |
| Msa0320290 | Msa1165480 | 0.802599 | 5.197904e-49 | -8.615850e-47 |
| Msa0320290 | Msa1169170 | 0.823422 | 1.397427e-53 | -8.615850e-47 |
| Msa0320290 | Msa1169690 | 0.810176 | 1.312790e-50 | -8.615850e-47 |
| Msa0320290 | Msa1188790 | 0.802018 | 6.845339e-49 | -8.615850e-47 |
| Msa0320290 | Msa1191000 | 0.835859 | 1.312544e-56 | -8.615850e-47 |
| Msa0320290 | Msa1215980 | 0.829755 | 4.310582e-55 | -8.615850e-47 |
| Msa0320290 | Msa1231780 | 0.822318 | 2.526292e-53 | -8.615850e-47 |
| Msa0320290 | Msa1242960 | 0.802195 | 6.294337e-49 | -8.615850e-47 |
| Msa0320290 | Msa1254420 | 0.813799 | 2.131887e-51 | -8.615850e-47 |
| Msa0320290 | Msa1267930 | 0.833999 | 3.862645e-56 | -8.615850e-47 |
| Msa0320290 | Msa1294790 | 0.816434 | 5.542506e-52 | -8.615850e-47 |
| Msa0320290 | Msa1301820 | 0.802828 | 4.662237e-49 | -8.615850e-47 |
| Msa0320290 | Msa1339230 | 0.898571 | 4.659062e-77 | -8.615850e-47 |
| Msa0320290 | Msa1361930 | 0.822658 | 2.105631e-53 | -8.615850e-47 |
| Msa0320290 | Msa1381470 | 0.831868 | 1.307406e-55 | -8.615850e-47 |
| Msa0320290 | Msa1381800 | 0.849626 | 2.866633e-60 | -8.615850e-47 |
| Msa0320290 | Msa1387500 | 0.847548 | 1.078470e-59 | -8.615850e-47 |
| Msa0320290 | Msa1390210 | 0.821963 | 3.053046e-53 | -8.615850e-47 |
| Msa0320290 | Msa1393560 | 0.814076 | 1.851941e-51 | -8.615850e-47 |
| Msa0320290 | Msa1406720 | 0.820196 | 7.793934e-53 | -8.615850e-47 |
| Msa0320290 | Msa1410190 | 0.912186 | 2.599340e-83 | -8.615850e-47 |
| Msa0320290 | Msa1424370 | 0.878439 | 2.806199e-69 | -8.615850e-47 |
| Msa0320290 | Msa1426320 | 0.809217 | 2.110519e-50 | -8.615850e-47 |
| Msa0320290 | Msa1432060 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0320290 | Msa1434640 | 0.812065 | 5.112341e-51 | -8.615850e-47 |
| Msa0320290 | Msa1435100 | 0.807623 | 4.617045e-50 | -8.615850e-47 |
| Msa0320290 | Msa1439730 | 0.816759 | 4.687063e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320290 | MtrunA17_Chr5g0410931 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr5g0410951 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr8g0383851 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr8g0383781 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr8g0390361 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr2g0295191 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr7g0237661 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr4g0033041 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr7g0218971 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr4g0046301 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr8g0364801 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0320290 | MtrunA17_Chr4g0054161 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320290 | MtrunA17_Chr8g0363741 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320290 | MtrunA17_Chr1g0156021 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0320290 | MtrunA17_Chr4g0054151 | 97.059 | 136 | 4 | 0 | 1 | 136 | 4 | 139 | 2.61e-93 | 265 |
| Msa0320290 | MtrunA17_Chr8g0388121 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.09e-92 | 264 |
| Msa0320290 | MtrunA17_Chr2g0319141 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0320290 | MtrunA17_Chr2g0319151 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0320290 | MtrunA17_Chr2g0319131 | 85.616 | 146 | 11 | 1 | 1 | 136 | 1 | 146 | 1.38e-82 | 238 |
| Msa0320290 | MtrunA17_Chr2g0319121 | 84.559 | 136 | 19 | 2 | 1 | 135 | 1 | 135 | 5.82e-75 | 219 |
| Msa0320290 | MtrunA17_Chr7g0218961 | 86.607 | 112 | 15 | 0 | 25 | 136 | 2 | 113 | 8.01e-66 | 195 |
| Msa0320290 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 1 | 134 | 10 | 142 | 5.47e-56 | 171 |
| Msa0320290 | MtrunA17_Chr5g0407311 | 67.241 | 116 | 35 | 2 | 1 | 116 | 1 | 113 | 1.29e-45 | 144 |
| Msa0320290 | MtrunA17_Chr7g0223001 | 58.647 | 133 | 41 | 3 | 3 | 134 | 27 | 146 | 5.46e-43 | 139 |
| Msa0320290 | MtrunA17_Chr7g0240791 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 9.61e-41 | 133 |
| Msa0320290 | MtrunA17_Chr8g0347231 | 55.102 | 98 | 43 | 1 | 37 | 133 | 28 | 125 | 3.80e-30 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320290 | AT1G09200.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320290 | AT5G65360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320290 | AT5G10390.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320290 | AT5G10400.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320290 | AT3G27360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0320290 | AT4G40030.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40030.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40030.4 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT5G10980.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40040.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40040.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40040.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0320290 | AT4G40030.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 29 | 164 | 7.05e-93 | 266 |
| Msa0320290 | AT5G65350.1 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 5.30e-91 | 260 |
| Msa0320290 | AT1G75600.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 1.25e-89 | 256 |
| Msa0320290 | AT1G13370.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 5.55e-89 | 254 |
| Msa0320290 | AT1G19890.1 | 89.781 | 137 | 13 | 1 | 1 | 136 | 1 | 137 | 1.07e-83 | 241 |
| Msa0320290 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 9.90e-67 | 198 |
| Msa0320290 | AT1G01370.2 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320290 | AT1G01370.1 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320290 | AT1G01370.4 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0320290 | AT1G01370.3 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
Find 38 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGAAGCTCAGTGCTCTTC+TGG | 0.304985 | 2_4:-20525165 | None:intergenic |
| TCACGAAGTGCGACGGTTCC+TGG | 0.318785 | 2_4:-20525130 | None:intergenic |
| GCTGCTGAAGCTTATCTTGT+TGG | 0.357332 | 2_4:+20525286 | Msa0320290:CDS |
| GAAGCTTCCATTTCAAAGAT+TGG | 0.365481 | 2_4:+20525192 | Msa0320290:CDS |
| TCTCGAACCAATCTTTGAAA+TGG | 0.396886 | 2_4:-20525199 | None:intergenic |
| GGATTTGCGGGCTGTTTGTT+TGG | 0.425629 | 2_4:-20525011 | None:intergenic |
| CGGAAATCCGCTCCGGCGAC+AGG | 0.432465 | 2_4:+20525079 | Msa0320290:CDS |
| TTCTTCACTCCTCCTGTCGC+CGG | 0.451049 | 2_4:-20525091 | None:intergenic |
| GGATTTCCGAGCGGCCTTTG+TGG | 0.451322 | 2_4:-20525065 | None:intergenic |
| GAGCAGAAACAGCACTACTC+TGG | 0.498444 | 2_4:-20525255 | None:intergenic |
| AAGCCCCACCGTTTCCGTCC+AGG | 0.502650 | 2_4:+20525112 | Msa0320290:CDS |
| CGACGGTTCCTGGACGGAAA+CGG | 0.511490 | 2_4:-20525120 | None:intergenic |
| TTGTGCTATTCATGCTAAGA+GGG | 0.513784 | 2_4:+20525330 | Msa0320290:CDS |
| GGTTCCTGGACGGAAACGGT+GGG | 0.514668 | 2_4:-20525116 | None:intergenic |
| GGCCGCTCGGAAATCCGCTC+CGG | 0.522574 | 2_4:+20525072 | Msa0320290:CDS |
| CAAACAGCCCGCAAATCCAC+CGG | 0.524480 | 2_4:+20525016 | Msa0320290:CDS |
| AGAGCACTGAGCTTCTCATA+AGG | 0.531497 | 2_4:+20525170 | Msa0320290:CDS |
| CGGTTCCTGGACGGAAACGG+TGG | 0.532129 | 2_4:-20525117 | None:intergenic |
| AAACAGCACTACTCTGGAAA+CGG | 0.532210 | 2_4:-20525249 | None:intergenic |
| GAGGGTTACTATTATGCCTA+AGG | 0.533362 | 2_4:+20525348 | Msa0320290:CDS |
| CTCGCAAGCTGAATATCCTT+AGG | 0.533935 | 2_4:-20525364 | None:intergenic |
| TTTGTGCTATTCATGCTAAG+AGG | 0.537531 | 2_4:+20525329 | Msa0320290:CDS |
| AACTCGCCACAAAGGCCGCT+CGG | 0.542091 | 2_4:+20525059 | Msa0320290:CDS |
| CAGTGCTCTTCTGGTACTTG+CGG | 0.559165 | 2_4:-20525156 | None:intergenic |
| CACTCCTCCTGTCGCCGGAG+CGG | 0.564263 | 2_4:-20525086 | None:intergenic |
| GAGAAGAATCAGAGGCGAAA+GGG | 0.568256 | 2_4:+20525384 | Msa0320290:CDS |
| CGAGAAGAATCAGAGGCGAA+AGG | 0.575054 | 2_4:+20525383 | Msa0320290:CDS |
| AATCGCTCAGGATTTCAAAA+CGG | 0.576806 | 2_4:+20525222 | Msa0320290:CDS |
| GCGGATTTCACGAAGTGCGA+CGG | 0.598942 | 2_4:-20525137 | None:intergenic |
| GTTCCTGGACGGAAACGGTG+GGG | 0.599384 | 2_4:-20525115 | None:intergenic |
| AAATCCGCTCCGGCGACAGG+AGG | 0.606452 | 2_4:+20525082 | Msa0320290:CDS |
| ATTGGTTCGAGAAATCGCTC+AGG | 0.615789 | 2_4:+20525210 | Msa0320290:CDS |
| ACGCAAACAACTCGCCACAA+AGG | 0.618065 | 2_4:+20525051 | Msa0320290:CDS |
| GAAGTGCGACGGTTCCTGGA+CGG | 0.655834 | 2_4:-20525126 | None:intergenic |
| ACAGCCCGCAAATCCACCGG+CGG | 0.662314 | 2_4:+20525019 | Msa0320290:CDS |
| CAGCTTGCGAGAAGAATCAG+AGG | 0.668283 | 2_4:+20525376 | Msa0320290:CDS |
| TTTGTGGCGAGTTGTTTGCG+TGG | 0.694492 | 2_4:-20525049 | None:intergenic |
| CGCCGGAGCGGATTTCCGAG+CGG | 0.708755 | 2_4:-20525074 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GAAGCTTCCATTTCAAAGAT+TGG | + | chr2_4:20525192-20525211 | Msa0320290:CDS | 35.0% | |
| ! | TCTCGAACCAATCTTTGAAA+TGG | - | chr2_4:20525202-20525221 | None:intergenic | 35.0% |
| AATCGCTCAGGATTTCAAAA+CGG | + | chr2_4:20525222-20525241 | Msa0320290:CDS | 35.0% | |
| ! | TTTGTGCTATTCATGCTAAG+AGG | + | chr2_4:20525329-20525348 | Msa0320290:CDS | 35.0% |
| ! | TTGTGCTATTCATGCTAAGA+GGG | + | chr2_4:20525330-20525349 | Msa0320290:CDS | 35.0% |
| ! | AAACAGCACTACTCTGGAAA+CGG | - | chr2_4:20525252-20525271 | None:intergenic | 40.0% |
| GAGGGTTACTATTATGCCTA+AGG | + | chr2_4:20525348-20525367 | Msa0320290:CDS | 40.0% | |
| !! | AGAGCACTGAGCTTCTCATA+AGG | + | chr2_4:20525170-20525189 | Msa0320290:CDS | 45.0% |
| !! | ATTGGTTCGAGAAATCGCTC+AGG | + | chr2_4:20525210-20525229 | Msa0320290:CDS | 45.0% |
| GCTGCTGAAGCTTATCTTGT+TGG | + | chr2_4:20525286-20525305 | Msa0320290:CDS | 45.0% | |
| CTCGCAAGCTGAATATCCTT+AGG | - | chr2_4:20525367-20525386 | None:intergenic | 45.0% | |
| GAGAAGAATCAGAGGCGAAA+GGG | + | chr2_4:20525384-20525403 | Msa0320290:CDS | 45.0% | |
| ! | GGATTTGCGGGCTGTTTGTT+TGG | - | chr2_4:20525014-20525033 | None:intergenic | 50.0% |
| TTTGTGGCGAGTTGTTTGCG+TGG | - | chr2_4:20525052-20525071 | None:intergenic | 50.0% | |
| ACGCAAACAACTCGCCACAA+AGG | + | chr2_4:20525051-20525070 | Msa0320290:CDS | 50.0% | |
| CAGTGCTCTTCTGGTACTTG+CGG | - | chr2_4:20525159-20525178 | None:intergenic | 50.0% | |
| TGAGAAGCTCAGTGCTCTTC+TGG | - | chr2_4:20525168-20525187 | None:intergenic | 50.0% | |
| GAGCAGAAACAGCACTACTC+TGG | - | chr2_4:20525258-20525277 | None:intergenic | 50.0% | |
| CAGCTTGCGAGAAGAATCAG+AGG | + | chr2_4:20525376-20525395 | Msa0320290:CDS | 50.0% | |
| CGAGAAGAATCAGAGGCGAA+AGG | + | chr2_4:20525383-20525402 | Msa0320290:CDS | 50.0% | |
| CAAACAGCCCGCAAATCCAC+CGG | + | chr2_4:20525016-20525035 | Msa0320290:CDS | 55.0% | |
| !! | TTTTCCGCCGGTGGATTTGC+GGG | - | chr2_4:20525026-20525045 | None:intergenic | 55.0% |
| !! | CTTTTCCGCCGGTGGATTTG+CGG | - | chr2_4:20525027-20525046 | None:intergenic | 55.0% |
| ! | TTTGCGTGGTGCTTTTCCGC+CGG | - | chr2_4:20525038-20525057 | None:intergenic | 55.0% |
| TTCTTCACTCCTCCTGTCGC+CGG | - | chr2_4:20525094-20525113 | None:intergenic | 55.0% | |
| GCGGATTTCACGAAGTGCGA+CGG | - | chr2_4:20525140-20525159 | None:intergenic | 55.0% | |
| AACTCGCCACAAAGGCCGCT+CGG | + | chr2_4:20525059-20525078 | Msa0320290:CDS | 60.0% | |
| GGATTTCCGAGCGGCCTTTG+TGG | - | chr2_4:20525068-20525087 | None:intergenic | 60.0% | |
| GTTCCTGGACGGAAACGGTG+GGG | - | chr2_4:20525118-20525137 | None:intergenic | 60.0% | |
| GGTTCCTGGACGGAAACGGT+GGG | - | chr2_4:20525119-20525138 | None:intergenic | 60.0% | |
| CGACGGTTCCTGGACGGAAA+CGG | - | chr2_4:20525123-20525142 | None:intergenic | 60.0% | |
| GAAGTGCGACGGTTCCTGGA+CGG | - | chr2_4:20525129-20525148 | None:intergenic | 60.0% | |
| TCACGAAGTGCGACGGTTCC+TGG | - | chr2_4:20525133-20525152 | None:intergenic | 60.0% | |
| ACAGCCCGCAAATCCACCGG+CGG | + | chr2_4:20525019-20525038 | Msa0320290:CDS | 65.0% | |
| AAATCCGCTCCGGCGACAGG+AGG | + | chr2_4:20525082-20525101 | Msa0320290:CDS | 65.0% | |
| AAGCCCCACCGTTTCCGTCC+AGG | + | chr2_4:20525112-20525131 | Msa0320290:CDS | 65.0% | |
| CGGTTCCTGGACGGAAACGG+TGG | - | chr2_4:20525120-20525139 | None:intergenic | 65.0% | |
| ! | GCGTGGTGCTTTTCCGCCGG+TGG | - | chr2_4:20525035-20525054 | None:intergenic | 70.0% |
| GGCCGCTCGGAAATCCGCTC+CGG | + | chr2_4:20525072-20525091 | Msa0320290:CDS | 70.0% | |
| ! | CGCCGGAGCGGATTTCCGAG+CGG | - | chr2_4:20525077-20525096 | None:intergenic | 70.0% |
| CGGAAATCCGCTCCGGCGAC+AGG | + | chr2_4:20525079-20525098 | Msa0320290:CDS | 70.0% | |
| CACTCCTCCTGTCGCCGGAG+CGG | - | chr2_4:20525089-20525108 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 20525001 | 20525411 | 20525001 | ID=Msa0320290;Name=Msa0320290 |
| chr2_4 | mRNA | 20525001 | 20525411 | 20525001 | ID=Msa0320290-mRNA-1;Parent=Msa0320290;Name=Msa0320290-mRNA-1;_AED=0.43;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|136 |
| chr2_4 | exon | 20525001 | 20525411 | 20525001 | ID=Msa0320290-mRNA-1:exon:7552;Parent=Msa0320290-mRNA-1 |
| chr2_4 | CDS | 20525001 | 20525411 | 20525001 | ID=Msa0320290-mRNA-1:cds;Parent=Msa0320290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
