AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0698880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698880 MtrunA17_Chr4g0052401 93.274 788 7 3 1 743 1 787 0.0 1479
Msa0698880 MtrunA17_Chr2g0297291 76.166 793 135 7 1 743 1 789 0.0 1188
Msa0698880 MtrunA17_Chr6g0461871 45.490 765 342 7 50 743 25 785 0.0 655
Msa0698880 MtrunA17_Chr6g0451081 42.440 787 371 11 28 743 1 776 0.0 622
Msa0698880 MtrunA17_Chr5g0430731 43.103 754 360 10 42 743 18 754 0.0 621
Msa0698880 MtrunA17_Chr3g0128831 43.609 798 364 13 28 743 1 794 0.0 611
Msa0698880 MtrunA17_Chr7g0268981 41.384 766 368 8 23 741 40 771 0.0 605
Msa0698880 MtrunA17_Chr8g0365001 43.040 783 368 13 26 743 71 840 0.0 595
Msa0698880 MtrunA17_Chr4g0055471 42.768 802 375 15 12 743 28 815 0.0 594
Msa0698880 MtrunA17_Chr2g0297311 71.910 445 80 2 1 400 1 445 0.0 592
Msa0698880 MtrunA17_Chr2g0279131 42.018 783 380 12 22 743 80 849 0.0 587
Msa0698880 MtrunA17_Chr5g0429991 41.799 756 367 11 52 743 103 849 0.0 577
Msa0698880 MtrunA17_Chr8g0387661 41.282 780 376 11 41 743 18 792 0.0 557
Msa0698880 MtrunA17_Chr8g0380281 39.899 792 397 11 18 743 4 782 0.0 553
Msa0698880 MtrunA17_Chr2g0297321 78.510 349 66 5 400 743 3 347 0.0 552
Msa0698880 MtrunA17_Chr8g0393241 36.632 778 400 13 52 740 23 796 4.78e-159 480
Msa0698880 MtrunA17_Chr8g0375411 33.722 771 378 15 21 741 9 696 4.25e-131 404
Msa0698880 MtrunA17_Chr5g0430571 39.560 546 280 10 219 743 19 535 5.98e-129 394
Msa0698880 MtrunA17_Chr8g0344561 37.037 594 291 11 199 743 13 572 2.05e-123 380
Msa0698880 MtrunA17_Chr8g0365031 36.126 573 255 8 218 741 39 549 1.63e-120 372
Msa0698880 MtrunA17_Chr5g0413721 46.380 442 178 7 28 412 1 440 1.88e-114 366
Msa0698880 MtrunA17_Chr5g0413721 39.833 359 199 4 399 743 516 871 5.76e-79 271
Msa0698880 MtrunA17_Chr8g0344591 41.725 429 208 7 199 595 13 431 3.81e-103 324
Msa0698880 MtrunA17_Chr8g0365041 51.777 197 93 1 22 216 35 231 1.09e-58 199
Msa0698880 MtrunA17_Chr5g0413751 49.432 176 89 0 400 575 133 308 8.48e-57 196
Msa0698880 MtrunA17_Chr5g0413751 45.652 92 45 1 109 195 47 138 4.05e-18 85.9
Msa0698880 MtrunA17_Chr8g0344581 54.000 150 66 1 50 199 4 150 6.20e-48 166
Msa0698880 MtrunA17_Chr5g0430551 52.597 154 70 1 49 199 10 163 8.46e-48 167
Msa0698880 MtrunA17_Chr8g0344551 54.000 150 66 1 50 199 4 150 9.45e-48 166
Msa0698880 MtrunA17_Chr1g0159401 44.444 117 55 2 197 308 12 123 1.20e-22 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0698880 AT2G35060.4 71.125 800 166 8 1 743 1 792 0.0 1102
Msa0698880 AT2G35060.1 71.125 800 166 8 1 743 1 792 0.0 1102
Msa0698880 AT2G35060.3 71.125 800 166 8 1 743 1 792 0.0 1102
Msa0698880 AT1G31120.1 71.606 803 161 9 1 743 1 796 0.0 1102
Msa0698880 AT2G35060.2 71.036 801 166 9 1 743 1 793 0.0 1098
Msa0698880 AT4G19960.2 63.827 810 223 7 1 743 1 807 0.0 961
Msa0698880 AT4G19960.1 62.591 826 223 8 1 743 1 823 0.0 951
Msa0698880 AT4G19960.3 61.842 836 223 8 1 743 1 833 0.0 946
Msa0698880 AT4G19960.4 61.630 589 164 5 214 743 1 586 0.0 679
Msa0698880 AT2G40540.1 44.207 794 365 10 28 743 1 794 0.0 627
Msa0698880 AT2G40540.5 44.207 794 365 10 28 743 1 794 0.0 627
Msa0698880 AT2G40540.4 44.207 794 365 10 28 743 1 794 0.0 627
Msa0698880 AT2G40540.2 44.207 794 365 10 28 743 1 794 0.0 627
Msa0698880 AT2G40540.3 44.207 794 365 10 28 743 1 794 0.0 627
Msa0698880 AT5G14880.1 44.246 782 359 12 34 743 5 781 0.0 612
Msa0698880 AT3G02050.1 44.248 791 363 9 27 743 3 789 0.0 612
Msa0698880 AT1G60160.1 42.649 755 372 8 42 743 81 827 0.0 610
Msa0698880 AT1G70300.1 42.239 786 380 10 28 743 1 782 0.0 604
Msa0698880 AT4G33530.1 42.274 809 387 13 4 743 58 855 0.0 602
Msa0698880 AT4G13420.1 41.288 792 396 8 4 741 7 783 0.0 599
Msa0698880 AT5G09400.1 42.331 815 391 13 5 743 47 858 0.0 572
Msa0698880 AT2G30070.1 47.360 606 271 4 42 599 18 623 0.0 570
Msa0698880 AT2G30070.1 38.961 77 47 0 667 743 636 712 1.04e-11 68.9
Msa0698880 AT4G23640.1 41.839 772 365 12 49 743 11 775 0.0 563
Msa0698880 AT4G33530.2 41.883 616 302 7 183 743 13 627 3.64e-161 480
Msa0698880 AT2G30070.2 45.618 502 228 3 143 599 2 503 1.18e-150 452
Msa0698880 AT2G30070.2 38.961 77 47 0 667 743 516 592 8.98e-12 68.9

Find 211 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGTCTTGGCGTGGTTTA+TGG 0.144680 4_4:-69331642 Msa0698880:CDS
ATCGGCTGTTGGTGGGATTA+AGG 0.255722 4_4:-69330365 Msa0698880:CDS
ACAAGGTATCTCTCTTCTTC+CGG 0.262164 4_4:+69328178 None:intergenic
GCTGGGGTGGTTCACATATT+AGG 0.264983 4_4:-69327779 Msa0698880:CDS
ATTCTTATTCTTGTCCTTGC+TGG 0.272064 4_4:-69330555 Msa0698880:CDS
ATTATATATATGCATTTCTT+AGG 0.280181 4_4:-69327700 Msa0698880:CDS
CTCAAGTATTTGTATTTGTC+TGG 0.284716 4_4:-69332922 Msa0698880:five_prime_UTR
TGTCGCCTGGCTTGCAACTA+TGG 0.292518 4_4:+69328933 None:intergenic
TTGCTCCAATTGTCCTCCTT+TGG 0.298318 4_4:-69330107 Msa0698880:CDS
ATTGATAAATTTAGATGTAT+TGG 0.300396 4_4:+69327284 None:intergenic
TCAGATGAATACAGTTTATA+TGG 0.316978 4_4:-69327998 Msa0698880:CDS
CTCCTTTGGTTTCTCCTAAT+AGG 0.317007 4_4:-69330093 Msa0698880:CDS
TTGCAGCAAATGACCTTTCA+TGG 0.321779 4_4:+69330622 None:intergenic
GAAAATTGCATAGCTGAAAA+TGG 0.322285 4_4:-69332085 Msa0698880:exon
CTTTGCATTGCCGTCACGGC+AGG 0.331474 4_4:-69328778 Msa0698880:CDS
CAAAGGTAGTATGTGGGATT+TGG 0.334435 4_4:-69332028 Msa0698880:CDS
CTCGGGCTTGGCCCAAGTTT+AGG 0.337026 4_4:-69328349 Msa0698880:CDS
GAAAATAAACTCAAACAAAA+AGG 0.344105 4_4:+69327427 None:intergenic
CAAGGTATCTCTCTTCTTCC+GGG 0.346404 4_4:+69328179 None:intergenic
TACCATAAGCATTTCCAATC+TGG 0.350786 4_4:+69328740 None:intergenic
TGTCTGTGCCATAATGTTGC+AGG 0.356956 4_4:+69330145 None:intergenic
ATTCTTACCCCGGCTATATC+AGG 0.357397 4_4:-69330507 Msa0698880:intron
CGAAAGATGTGGTAATTCTT+AGG 0.358981 4_4:+69328142 None:intergenic
ATCAGAAAGAAGAAGTGATA+TGG 0.358989 4_4:+69332738 None:intergenic
ATATTTAACATCTGTAAGTA+TGG 0.359612 4_4:-69330060 Msa0698880:CDS
TATATAGTCCAGATATCAAT+TGG 0.360279 4_4:-69328813 Msa0698880:CDS
TGTGATGGAGAGTACAAAAC+TGG 0.363148 4_4:+69332663 None:intergenic
ATATACCAATACCTCCTATT+AGG 0.365604 4_4:+69330079 None:intergenic
TCTTAAAATCTTAAACTAAC+TGG 0.368693 4_4:-69327342 Msa0698880:three_prime_UTR
AACCAGATTGGAAATGCTTA+TGG 0.368806 4_4:-69328742 Msa0698880:intron
ATTATGTTTGTCTGGCATTA+CGG 0.372759 4_4:-69328427 Msa0698880:CDS
TGATATCTGGACTATATATC+TGG 0.373074 4_4:+69328818 None:intergenic
GTCTCGATGGCATGGATTCT+CGG 0.378294 4_4:-69328367 Msa0698880:CDS
TCATCGGTGCGATGCTGATT+GGG 0.380293 4_4:+69330675 None:intergenic
TTCATCGGTGCGATGCTGAT+TGG 0.380303 4_4:+69330674 None:intergenic
ATAAGGACCCAATTGATATC+TGG 0.383547 4_4:+69328805 None:intergenic
GGAACATACCATTACTCATA+TGG 0.384347 4_4:+69330332 None:intergenic
TGGGTTCCTCTTGTAATTGC+CGG 0.384804 4_4:-69328463 Msa0698880:CDS
ATGGCATGGATTCTCGGGCT+TGG 0.385857 4_4:-69328361 Msa0698880:CDS
TTAGGACTTGTTCGTGTACC+TGG 0.405042 4_4:-69328331 Msa0698880:CDS
GATTATCTACTCTCTTACCT+TGG 0.406143 4_4:-69331529 Msa0698880:CDS
TCTTCATCTTTCACACCGTT+CGG 0.408337 4_4:+69331576 None:intergenic
ATTGCTGTTGTAATATTAGT+TGG 0.412164 4_4:-69330177 Msa0698880:CDS
GTGTAGACTAGTCCGATTCC+AGG 0.417435 4_4:+69328313 None:intergenic
CATAAAATGACTTGTGATGA+AGG 0.418940 4_4:+69327586 None:intergenic
AAATAGTGATATATGTAAAC+AGG 0.422030 4_4:+69330012 None:intergenic
TTTCTCCTAATAGGAGGTAT+TGG 0.422505 4_4:-69330084 Msa0698880:CDS
AGAAACCAAAGGAGGACAAT+TGG 0.429550 4_4:+69330102 None:intergenic
TCTTCCGGGACGGTGTAAAC+AGG 0.434145 4_4:+69328193 None:intergenic
ACTCTTCGTCTTTCTTGTGC+AGG 0.434280 4_4:+69328092 None:intergenic
GCTGGCACCTGCATGGTAAT+CGG 0.439778 4_4:-69330537 Msa0698880:CDS
TTGAATAACTGCAGGGACGC+TGG 0.441557 4_4:-69327797 Msa0698880:CDS
AGGGATAGTAGTAGAATTGA+GGG 0.442746 4_4:-69332118 Msa0698880:five_prime_UTR
TCTCGATGGCATGGATTCTC+GGG 0.451131 4_4:-69328366 Msa0698880:CDS
GTATATACAACTTTAACTCT+AGG 0.455200 4_4:+69328859 None:intergenic
CTTCCTGCCTCTTCCTCCAT+AGG 0.455502 4_4:+69331988 None:intergenic
GTGATAACAAAGGTAGTATG+TGG 0.456986 4_4:-69332035 Msa0698880:CDS
GGCAGCCATAGTTGCAAGCC+AGG 0.457567 4_4:-69328938 Msa0698880:CDS
CTAACAGTGATATTCACATT+TGG 0.460145 4_4:+69327869 None:intergenic
TTCGAAAATCAAAACCAGAT+TGG 0.460880 4_4:-69328754 Msa0698880:CDS
GGCGTGGTTTATGGAGATTT+AGG 0.461670 4_4:-69331633 Msa0698880:CDS
CAAATGTGAATATCACTGTT+AGG 0.464701 4_4:-69327868 Msa0698880:CDS
TATTGGTGTGGCGCTGCCAC+TGG 0.464822 4_4:-69328573 Msa0698880:CDS
ATATCATGATTAAAATCATA+AGG 0.466363 4_4:+69328593 None:intergenic
CTGCCTCTTCCTCCATAGGC+TGG 0.471158 4_4:+69331992 None:intergenic
TGAATAACTGCAGGGACGCT+GGG 0.476846 4_4:-69327796 Msa0698880:CDS
TGACCAGCCTATGGAGGAAG+AGG 0.478610 4_4:-69331995 Msa0698880:CDS
AAGGGATAGTAGTAGAATTG+AGG 0.479550 4_4:-69332119 Msa0698880:five_prime_UTR
GAACATACCATTACTCATAT+GGG 0.479647 4_4:+69330333 None:intergenic
TCAAAGTTAATCAAGGTGGA+TGG 0.480215 4_4:-69328483 Msa0698880:CDS
TAGCAGATTGTACTTCATAC+AGG 0.484544 4_4:-69332638 Msa0698880:intron
CTTGTTCGTGTACCTGGAAT+CGG 0.484864 4_4:-69328325 Msa0698880:CDS
AGATACCTTGTAAAGAGGAT+TGG 0.486463 4_4:-69328166 Msa0698880:CDS
TTTCGATGTGTGGCACGGTA+TGG 0.488737 4_4:-69328124 Msa0698880:CDS
CGGCTTGCATATCAGAGTCT+TGG 0.492350 4_4:-69331654 Msa0698880:CDS
CCCGTCTCCGATTACCATGC+AGG 0.492534 4_4:+69330530 None:intergenic
CATTTCTTAGGAAAATATGC+AGG 0.492742 4_4:-69327688 Msa0698880:CDS
TGTACAGCTTGCATTTACTC+TGG 0.493940 4_4:-69329474 Msa0698880:CDS
ATATGTTGTTAGTTCTTCAT+CGG 0.496853 4_4:+69330659 None:intergenic
AGTAGTAGAATTGAGGGAAA+AGG 0.497157 4_4:-69332112 Msa0698880:five_prime_UTR
ATATATGTAAACAGGAGAAA+AGG 0.499936 4_4:+69330020 None:intergenic
TCAGAAGCTTGACCAGCCTA+TGG 0.501135 4_4:-69332004 Msa0698880:CDS
AAGAGAGATACCTTGTAAAG+AGG 0.504738 4_4:-69328171 Msa0698880:CDS
TAGGTCCAATCCTCTTTACA+AGG 0.508685 4_4:+69328161 None:intergenic
GTAATCTTCAAAGTTAATCA+AGG 0.509932 4_4:-69328490 Msa0698880:CDS
CACTTGCTTATCATTGATTG+TGG 0.513008 4_4:-69328533 Msa0698880:CDS
ATGGCACAGACAAAGTTAGT+TGG 0.513478 4_4:-69330134 Msa0698880:CDS
GGTTGGAGGAACGTGAATCA+TGG 0.513701 4_4:-69330587 Msa0698880:CDS
CTTTGGTTTCTCCTAATAGG+AGG 0.516527 4_4:-69330090 Msa0698880:CDS
AAAGATGAAGAGGAAGTACT+TGG 0.516753 4_4:-69331564 Msa0698880:CDS
CAAGCTTAACAAACAGTGAA+AGG 0.516927 4_4:+69328047 None:intergenic
CAGCCTATGGAGGAAGAGGC+AGG 0.517760 4_4:-69331991 Msa0698880:CDS
ACAGTGATATTCACATTTGG+CGG 0.519018 4_4:+69327872 None:intergenic
ACACGAACAAGTCCTAAACT+TGG 0.520151 4_4:+69328337 None:intergenic
TACCTCAACTTTGCATAGGA+TGG 0.520946 4_4:+69327559 None:intergenic
CACAGTTGTGATGGCAAGGA+GGG 0.523327 4_4:-69327753 Msa0698880:CDS
GTCGTTCTACCTTCCATGAA+AGG 0.523441 4_4:-69330635 Msa0698880:CDS
TTTAGAAGAGGTGGAAAACA+AGG 0.524364 4_4:-69329991 Msa0698880:CDS
ACCTGCATGGTAATCGGAGA+CGG 0.529408 4_4:-69330531 Msa0698880:CDS
AAACAAGGATGGACTTCCCT+TGG 0.530115 4_4:-69329976 Msa0698880:CDS
CAGTTTATATGGAGGACAGC+AGG 0.530247 4_4:-69327987 Msa0698880:CDS
ATGTTGCAGTTATTGTCGCC+TGG 0.531764 4_4:+69328920 None:intergenic
GATTCTTTGCATTGCCGTCA+CGG 0.532435 4_4:-69328782 Msa0698880:CDS
CGGCAATGCAAAGAATCATA+AGG 0.533751 4_4:+69328788 None:intergenic
GCATATGTACCTGATATAGC+CGG 0.535287 4_4:+69330498 None:intergenic
CTGAGACCGGAAAATGAGAT+AGG 0.535427 4_4:+69329498 None:intergenic
CAAAGTTAATCAAGGTGGAT+GGG 0.539107 4_4:-69328482 Msa0698880:CDS
TGTTAAGCTTGAATCTATGA+TGG 0.539727 4_4:-69328035 Msa0698880:CDS
ATTAAGCAAGCCCTTGCTCA+TGG 0.540837 4_4:-69328889 Msa0698880:CDS
AGCAAGGACAAGAATAAGAA+TGG 0.541082 4_4:+69330557 None:intergenic
TGTCCTTGCTGGCACCTGCA+TGG 0.541400 4_4:-69330544 Msa0698880:CDS
CATATGTACCTGATATAGCC+GGG 0.543217 4_4:+69330499 None:intergenic
AACATCTGTAAGTATGGAAG+CGG 0.546719 4_4:-69330054 Msa0698880:CDS
GCAAGCTGTACAGCTGAGAC+CGG 0.546898 4_4:+69329485 None:intergenic
CAAGGATGGACTTCCCTTGG+TGG 0.548086 4_4:-69329973 Msa0698880:intron
TATATACAACTTTAACTCTA+GGG 0.551474 4_4:+69328860 None:intergenic
AGAGCAGAGTCTTGTTGTTG+TGG 0.553083 4_4:+69332883 None:intergenic
ATCTGGACTATATATCTGGC+CGG 0.553085 4_4:+69328822 None:intergenic
GGTGCGATGCTGATTGGGAA+TGG 0.553849 4_4:+69330680 None:intergenic
CATGAGAGTCTCTTAAATGT+TGG 0.554708 4_4:-69327638 Msa0698880:CDS
TTTCTGCATTGTTGATTCTG+CGG 0.554902 4_4:-69331674 Msa0698880:CDS
GTTCATGTGAAGGAGGATTG+TGG 0.558366 4_4:+69332817 None:intergenic
ACAACAACAGAATGGATGGC+TGG 0.560974 4_4:+69328238 None:intergenic
GTACAATCTGCTACTTGTGA+TGG 0.563353 4_4:+69332648 None:intergenic
AGGTCCTGCGGTCAAGTAAG+TGG 0.564330 4_4:-69327848 Msa0698880:CDS
AGGAAGAGGCAGGAAGACTC+AGG 0.565443 4_4:-69331981 Msa0698880:CDS
TTTGCATTGCCGTCACGGCA+GGG 0.565906 4_4:-69328777 Msa0698880:CDS
TAGGGAAACAACCATGAGCA+AGG 0.568381 4_4:+69328878 None:intergenic
CCTTCCTGTTTACACCGTCC+CGG 0.569084 4_4:-69328197 Msa0698880:CDS
TTGGCCACTTACTTGACCGC+AGG 0.570429 4_4:+69327844 None:intergenic
GCTGAAAATGGCTTCAAGAG+TGG 0.573798 4_4:-69332073 Msa0698880:exon
CAAGTAAGTGGCCAAACCGA+GGG 0.574154 4_4:-69327836 Msa0698880:CDS
AATCAGCCCCATATGAGTAA+TGG 0.574491 4_4:-69330340 Msa0698880:intron
CAACAGAATGGATGGCTGGT+AGG 0.574816 4_4:+69328242 None:intergenic
ATAAAATGACTTGTGATGAA+GGG 0.576000 4_4:+69327587 None:intergenic
AGCAAATGACCTTTCATGGA+AGG 0.576121 4_4:+69330626 None:intergenic
TAACTGCAGGGACGCTGGGG+TGG 0.576829 4_4:-69327792 Msa0698880:CDS
TATACATCAAAGAAGTTCGC+CGG 0.578486 4_4:-69328841 Msa0698880:CDS
TGCAGAAAGAATATACTGGC+CGG 0.579503 4_4:-69328980 Msa0698880:intron
CGGAGACGGGATTCTTACCC+CGG 0.579878 4_4:-69330517 Msa0698880:CDS
AAGAGTGGACACTGATGAAG+AGG 0.581426 4_4:-69332058 Msa0698880:CDS
GTATCTCTCTTCTTCCGGGA+CGG 0.583221 4_4:+69328183 None:intergenic
GTCTACACAGAACTTGCAAG+TGG 0.583444 4_4:-69328298 Msa0698880:CDS
AGAATGGATGGCTGGTAGGT+TGG 0.583797 4_4:+69328246 None:intergenic
CCTGCATGGTAATCGGAGAC+GGG 0.583917 4_4:-69330530 Msa0698880:CDS
CAAGATTGTTCATGTGAAGG+AGG 0.586397 4_4:+69332810 None:intergenic
ATTAGGAAACACAGTTGTGA+TGG 0.587624 4_4:-69327762 Msa0698880:CDS
TTCTACAACATATTTCCGAA+CGG 0.589094 4_4:-69331591 Msa0698880:CDS
GAAACACAGTTGTGATGGCA+AGG 0.591010 4_4:-69327757 Msa0698880:CDS
GAAGAGGTGGAAAACAAGGA+TGG 0.591042 4_4:-69329987 Msa0698880:CDS
GAACAACATCACCTTGCTTG+CGG 0.591857 4_4:-69327524 Msa0698880:three_prime_UTR
GTGATATTCACATTTGGCGG+CGG 0.592182 4_4:+69327875 None:intergenic
GAACGGTGTGAAAGATGAAG+AGG 0.595547 4_4:-69331574 Msa0698880:CDS
AGCACTGATTACCGCAAGCA+AGG 0.598133 4_4:+69327513 None:intergenic
ATATAGTCCAGATATCAATT+GGG 0.598472 4_4:-69328812 Msa0698880:CDS
TGATAACAAAGGTAGTATGT+GGG 0.599126 4_4:-69332034 Msa0698880:CDS
TCAAGTAAGTGGCCAAACCG+AGG 0.600769 4_4:-69327837 Msa0698880:CDS
ATGCAAGATTGTTCATGTGA+AGG 0.601677 4_4:+69332807 None:intergenic
ACTAATTGTGATGCTTCACG+TGG 0.603579 4_4:-69327200 Msa0698880:three_prime_UTR
TTACCACATCTTTCGATGTG+TGG 0.605821 4_4:-69328134 Msa0698880:CDS
TGCCATCCTATGCAAAGTTG+AGG 0.606420 4_4:-69327561 Msa0698880:three_prime_UTR
CACTTACCTCAACTTTGCAT+AGG 0.607176 4_4:+69327555 None:intergenic
GACCGGAAAATGAGATAGGT+CGG 0.608967 4_4:+69329502 None:intergenic
CACGAACAAGTCCTAAACTT+GGG 0.614583 4_4:+69328338 None:intergenic
TGCATATCAGAGTCTTGGCG+TGG 0.618746 4_4:-69331649 Msa0698880:CDS
ATAGTAAAGTCTCGATGGCA+TGG 0.620677 4_4:-69328375 Msa0698880:CDS
AATATCACTGTTAGGTCCTG+CGG 0.624494 4_4:-69327860 Msa0698880:CDS
AAGCACGACTTCTTCGAATG+TGG 0.624780 4_4:-69327942 Msa0698880:CDS
AATCAATGATAAGCAAGTGA+AGG 0.625371 4_4:+69328537 None:intergenic
ATTTCTTAGGAAAATATGCA+GGG 0.625694 4_4:-69327687 Msa0698880:CDS
ATGACTTGTGATGAAGGGCA+TGG 0.632939 4_4:+69327592 None:intergenic
AACACTCCGGCAATTACAAG+AGG 0.633389 4_4:+69328457 None:intergenic
TGACTTGTGATGAAGGGCAT+GGG 0.633917 4_4:+69327593 None:intergenic
ATCTTCAAAGTTAATCAAGG+TGG 0.637689 4_4:-69328487 Msa0698880:CDS
AATGCATAGTAAAGTCTCGA+TGG 0.638063 4_4:-69328380 Msa0698880:CDS
CGACTAAAACGACATAACTG+TGG 0.639224 4_4:-69327405 Msa0698880:three_prime_UTR
GAAGCTTGACCAGCCTATGG+AGG 0.640712 4_4:-69332001 Msa0698880:CDS
AAGCTTGAATCTATGATGGA+AGG 0.641141 4_4:-69328031 Msa0698880:CDS
AGGGAAACAACCATGAGCAA+GGG 0.643819 4_4:+69328879 None:intergenic
GAATAACTGCAGGGACGCTG+GGG 0.645282 4_4:-69327795 Msa0698880:CDS
ACATCTTTCGATGTGTGGCA+CGG 0.647935 4_4:-69328129 Msa0698880:CDS
TAAAATCTTAAACTAACTGG+CGG 0.649207 4_4:-69327339 Msa0698880:three_prime_UTR
AACATACCATTACTCATATG+GGG 0.653081 4_4:+69330334 None:intergenic
GATGAATACAGTTTATATGG+AGG 0.656772 4_4:-69327995 Msa0698880:CDS
CCGGGACGGTGTAAACAGGA+AGG 0.657637 4_4:+69328197 None:intergenic
GATGAATTTATTAGGGACGG+AGG 0.657712 4_4:-69329534 Msa0698880:intron
TTACCATGCAGGTGCCAGCA+AGG 0.657855 4_4:+69330541 None:intergenic
CTTGTGATGAAGGGCATGGG+AGG 0.662534 4_4:+69327596 None:intergenic
GATGAAGAGGGTGATAACAA+AGG 0.665526 4_4:-69332045 Msa0698880:CDS
TTATATGGAGGACAGCAGGA+TGG 0.666470 4_4:-69327983 Msa0698880:CDS
ACACAGTTGTGATGGCAAGG+AGG 0.669872 4_4:-69327754 Msa0698880:CDS
AGAGCAAATGACAATGGACA+AGG 0.674340 4_4:-69331474 Msa0698880:intron
TTTGTTAACAGGTACTGCAG+TGG 0.676356 4_4:-69328641 Msa0698880:intron
GTGTTAAGAGCAAATGACAA+TGG 0.677304 4_4:-69331480 Msa0698880:CDS
GTGCCACACATCGAAAGATG+TGG 0.686236 4_4:+69328131 None:intergenic
ATGTTGTAGAAAACATACAA+AGG 0.686924 4_4:+69331603 None:intergenic
GTGATGAAATGAGAAAAGAT+CGG 0.689117 4_4:+69328268 None:intergenic
AAGTAAGTGGCCAAACCGAG+GGG 0.689786 4_4:-69327835 Msa0698880:CDS
TACTGAGCATGATACCACCA+AGG 0.690342 4_4:+69329959 None:intergenic
ACTGAGCATGATACCACCAA+GGG 0.691706 4_4:+69329960 None:intergenic
CTCCTATTAGGAGAAACCAA+AGG 0.694794 4_4:+69330091 None:intergenic
AGAGTGGACACTGATGAAGA+GGG 0.700617 4_4:-69332057 Msa0698880:CDS
CTATTAGGAGAAACCAAAGG+AGG 0.702161 4_4:+69330094 None:intergenic
ATGAAATGAGAAAAGATCGG+TGG 0.702922 4_4:+69328271 None:intergenic
AGTAAGTGGCCAAACCGAGG+GGG 0.709182 4_4:-69327834 Msa0698880:CDS
ATATGTACCTGATATAGCCG+GGG 0.713157 4_4:+69330500 None:intergenic
ATATTTGAGAAGAGGCACCA+AGG 0.717350 4_4:+69331512 None:intergenic
ACATTTAAGAGACTCTCATG+AGG 0.718347 4_4:+69327641 None:intergenic
GTGATGGAGAGTACAAAACT+GGG 0.724792 4_4:+69332664 None:intergenic
GATGGCGTGTTGAATAACAA+CGG 0.731429 4_4:-69327965 Msa0698880:CDS
AGGCGAGTACAAGAATCCAG+TGG 0.751362 4_4:+69328557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATCAACAAAAT+TGG + chr4_4:69327745-69327764 None:intergenic 10.0%
!! ATAAACATAAATTAAGATTG+AGG + chr4_4:69327700-69327719 None:intergenic 15.0%
!!! TGATTTTTTTTAATACTCTA+AGG - chr4_4:69327752-69327771 Msa0698880:CDS 15.0%
!! AAATTAAAACACATTTATAC+TGG + chr4_4:69327782-69327801 None:intergenic 15.0%
!!! TGTATTGTTTTTTGAAAAAA+TGG - chr4_4:69327834-69327853 Msa0698880:CDS 15.0%
!! TAAACTTTGACAAAAAAAAA+AGG + chr4_4:69327927-69327946 None:intergenic 15.0%
!!! TGAAATATTGTTTTTTCTTA+AGG - chr4_4:69327997-69328016 Msa0698880:CDS 15.0%
!!! GAAATATTGTTTTTTCTTAA+GGG - chr4_4:69327998-69328017 Msa0698880:CDS 15.0%
!!! CTTTTTTCTTTTTACTTTTT+TGG - chr4_4:69329131-69329150 Msa0698880:intron 15.0%
!! ATATCATGATTAAAATCATA+AGG + chr4_4:69331545-69331564 None:intergenic 15.0%
!!! TATGATTTTAATCATGATAT+TGG - chr4_4:69331545-69331564 Msa0698880:CDS 15.0%
!! ATTATATATATGCATTTCTT+AGG - chr4_4:69332435-69332454 Msa0698880:intron 15.0%
!! ATTGATAAATTTAGATGTAT+TGG + chr4_4:69332854-69332873 None:intergenic 15.0%
!!! TTTTTATTTTCACAATCAAG+TGG - chr4_4:69327570-69327589 Msa0698880:three_prime_UTR 20.0%
!!! TTTTATTTTCACAATCAAGT+GGG - chr4_4:69327571-69327590 Msa0698880:three_prime_UTR 20.0%
!!! TTTCTTTTTGGTAGATAAAA+TGG - chr4_4:69328250-69328269 Msa0698880:CDS 20.0%
!! ATAAAAACATATTTGAGAAG+AGG + chr4_4:69328634-69328653 None:intergenic 20.0%
!!! TCAATTGTTTTCTAAACTTT+TGG - chr4_4:69328686-69328705 Msa0698880:intron 20.0%
!!! GTTAATATTTGCATCTTTTA+TGG - chr4_4:69328829-69328848 Msa0698880:CDS 20.0%
!! AAAAAAGGATGGTTATATTA+GGG - chr4_4:69329022-69329041 Msa0698880:intron 20.0%
!!! TATTGATAACAATGAAACTA+CGG + chr4_4:69329259-69329278 None:intergenic 20.0%
!!! ATTTTAATTACAGTTATGGA+AGG + chr4_4:69329290-69329309 None:intergenic 20.0%
!!! GAGTATTTTAATTACAGTTA+TGG + chr4_4:69329294-69329313 None:intergenic 20.0%
!!! TGTTTTTAACGAATTTAAGT+TGG - chr4_4:69329886-69329905 Msa0698880:intron 20.0%
!!! GTTTTTAACGAATTTAAGTT+GGG - chr4_4:69329887-69329906 Msa0698880:intron 20.0%
!! ATATTTAACATCTGTAAGTA+TGG - chr4_4:69330075-69330094 Msa0698880:CDS 20.0%
!! AAATAGTGATATATGTAAAC+AGG + chr4_4:69330126-69330145 None:intergenic 20.0%
!!! ATATATCACTATTTTAGAAG+AGG - chr4_4:69330132-69330151 Msa0698880:CDS 20.0%
!! TACAATGTATTTAAGTACTA+CGG + chr4_4:69330360-69330379 None:intergenic 20.0%
!!! TTTTGTACTTTAACAACTTT+TGG - chr4_4:69330579-69330598 Msa0698880:CDS 20.0%
!!! AACTTTTGGATGAATTTATT+AGG - chr4_4:69330593-69330612 Msa0698880:CDS 20.0%
!!! ACTTTTGGATGAATTTATTA+GGG - chr4_4:69330594-69330613 Msa0698880:CDS 20.0%
!!! TTTCTCTTATATTTTTCGAA+TGG - chr4_4:69331092-69331111 Msa0698880:intron 20.0%
!! TATATACAACTTTAACTCTA+GGG + chr4_4:69331278-69331297 None:intergenic 20.0%
!! AATTGAGAGAAAATATTCAT+TGG + chr4_4:69331447-69331466 None:intergenic 20.0%
!!! TGAATTTACAATTTGTTAAC+AGG - chr4_4:69331483-69331502 Msa0698880:CDS 20.0%
!!! TTTTTATCATTATGTTTGTC+TGG - chr4_4:69331700-69331719 Msa0698880:intron 20.0%
!! GAAAATAAACTCAAACAAAA+AGG + chr4_4:69332711-69332730 None:intergenic 20.0%
!!! AGTTAGTTTAAGATTTTAAG+AGG + chr4_4:69332794-69332813 None:intergenic 20.0%
!! TCTTAAAATCTTAAACTAAC+TGG - chr4_4:69332793-69332812 Msa0698880:five_prime_UTR 20.0%
!!! TTTATTTTCACAATCAAGTG+GGG - chr4_4:69327572-69327591 Msa0698880:three_prime_UTR 25.0%
! TTGAAAATTCCATTGATCTA+TGG + chr4_4:69327899-69327918 None:intergenic 25.0%
! AGAGACAATGTTAAATTCAT+AGG + chr4_4:69328214-69328233 None:intergenic 25.0%
! CCAAAAAGAAAATCAATATG+AGG + chr4_4:69328241-69328260 None:intergenic 25.0%
!!! CCTCATATTGATTTTCTTTT+TGG - chr4_4:69328238-69328257 Msa0698880:CDS 25.0%
! AAAAACACAATCACAAACAT+TGG + chr4_4:69328319-69328338 None:intergenic 25.0%
! ATGTTGTAGAAAACATACAA+AGG + chr4_4:69328535-69328554 None:intergenic 25.0%
! TGCCAGATACAAATTTAAAA+AGG - chr4_4:69328859-69328878 Msa0698880:CDS 25.0%
! GCCAGATACAAATTTAAAAA+GGG - chr4_4:69328860-69328879 Msa0698880:CDS 25.0%
!! TCCCTTTTTAAATTTGTATC+TGG + chr4_4:69328864-69328883 None:intergenic 25.0%
! GAAAAAAGGATGGTTATATT+AGG - chr4_4:69329021-69329040 Msa0698880:intron 25.0%
! TATTTCCCTGTTCTAATATA+GGG - chr4_4:69329055-69329074 Msa0698880:intron 25.0%
! TATAACCCTATATTAGAACA+GGG + chr4_4:69329063-69329082 None:intergenic 25.0%
! TTATAACCCTATATTAGAAC+AGG + chr4_4:69329064-69329083 None:intergenic 25.0%
!!! TAGTTTTATTATGCCTTTAG+AGG - chr4_4:69329102-69329121 Msa0698880:intron 25.0%
! AAAAAAGAAATTGCCTCTAA+AGG + chr4_4:69329118-69329137 None:intergenic 25.0%
!! ATATGTTGTTAGTTCTTCAT+CGG + chr4_4:69329479-69329498 None:intergenic 25.0%
! TAAGAATCTCTTCAAATAGA+TGG + chr4_4:69329728-69329747 None:intergenic 25.0%
! ATAAAACTACATGGAAGATA+TGG + chr4_4:69329752-69329771 None:intergenic 25.0%
!!! TATCTTCCATGTAGTTTTAT+CGG - chr4_4:69329752-69329771 Msa0698880:intron 25.0%
! TTGAAAAGCTTCTTTATCTT+TGG - chr4_4:69329915-69329934 Msa0698880:intron 25.0%
!! ATTGCTGTTGTAATATTAGT+TGG - chr4_4:69329958-69329977 Msa0698880:intron 25.0%
! ATATATGTAAACAGGAGAAA+AGG + chr4_4:69330118-69330137 None:intergenic 25.0%
! AACACTAATTACATTAAGGA+AGG + chr4_4:69330259-69330278 None:intergenic 25.0%
! TTCCTTAATGTAATTAGTGT+TGG - chr4_4:69330258-69330277 Msa0698880:intron 25.0%
! TCCTTAATGTAATTAGTGTT+GGG - chr4_4:69330259-69330278 Msa0698880:intron 25.0%
! CAATTGTTAGAACAATAACT+CGG + chr4_4:69330515-69330534 None:intergenic 25.0%
! AATGAGTCAAGTTATTCATA+AGG + chr4_4:69330733-69330752 None:intergenic 25.0%
! TATATTGAAATCTTCATGTC+TGG - chr4_4:69330803-69330822 Msa0698880:intron 25.0%
!! ACAGTATTTTCAAACTCTAT+GGG + chr4_4:69331013-69331032 None:intergenic 25.0%
!! TACAGTATTTTCAAACTCTA+TGG + chr4_4:69331014-69331033 None:intergenic 25.0%
! GTATATACAACTTTAACTCT+AGG + chr4_4:69331279-69331298 None:intergenic 25.0%
! TATATAGTCCAGATATCAAT+TGG - chr4_4:69331322-69331341 Msa0698880:intron 25.0%
! ATATAGTCCAGATATCAATT+GGG - chr4_4:69331323-69331342 Msa0698880:intron 25.0%
!! TTTTAATCATGATATTGGTG+TGG - chr4_4:69331550-69331569 Msa0698880:CDS 25.0%
! GTAATCTTCAAAGTTAATCA+AGG - chr4_4:69331645-69331664 Msa0698880:CDS 25.0%
! CATAATGATAAAAAACACTC+CGG + chr4_4:69331694-69331713 None:intergenic 25.0%
! ATACAAAAACAACAACAGAA+TGG + chr4_4:69331908-69331927 None:intergenic 25.0%
! TCAGATGAATACAGTTTATA+TGG - chr4_4:69332137-69332156 Msa0698880:intron 25.0%
!! TTGAATTTTTGAATAACTGC+AGG - chr4_4:69332330-69332349 Msa0698880:intron 25.0%
!! TGAATTTTTGAATAACTGCA+GGG - chr4_4:69332331-69332350 Msa0698880:intron 25.0%
! ATTTCTTAGGAAAATATGCA+GGG - chr4_4:69332448-69332467 Msa0698880:intron 25.0%
!! ATAAAATGACTTGTGATGAA+GGG + chr4_4:69332551-69332570 None:intergenic 25.0%
! TAAAATCTTAAACTAACTGG+CGG - chr4_4:69332796-69332815 Msa0698880:five_prime_UTR 25.0%
CTCAAGTATTTGTATTTGTC+TGG - chr4_4:69327213-69327232 Msa0698880:three_prime_UTR 30.0%
ATCAGAAAGAAGAAGTGATA+TGG + chr4_4:69327400-69327419 None:intergenic 30.0%
CATAAATTAAGATTGAGGAC+TGG + chr4_4:69327695-69327714 None:intergenic 30.0%
TTTCACTTTCCATAGATCAA+TGG - chr4_4:69327887-69327906 Msa0698880:CDS 30.0%
GAAAATTGCATAGCTGAAAA+TGG - chr4_4:69328050-69328069 Msa0698880:CDS 30.0%
TGATAACAAAGGTAGTATGT+GGG - chr4_4:69328101-69328120 Msa0698880:CDS 30.0%
TAAGCTAATATGTAAGCTCT+TGG - chr4_4:69328389-69328408 Msa0698880:CDS 30.0%
ATATGTAAGCTCTTGGAATT+TGG - chr4_4:69328396-69328415 Msa0698880:CDS 30.0%
TTCTACAACATATTTCCGAA+CGG - chr4_4:69328544-69328563 Msa0698880:CDS 30.0%
ACAAATGGAAACAAAATGAG+TGG + chr4_4:69328777-69328796 None:intergenic 30.0%
CTACACTAAATATACACTGT+GGG + chr4_4:69328810-69328829 None:intergenic 30.0%
ACTACACTAAATATACACTG+TGG + chr4_4:69328811-69328830 None:intergenic 30.0%
TAATCAATAGCATGCTATAG+CGG - chr4_4:69328904-69328923 Msa0698880:CDS 30.0%
TGCTAAATGCTTCAGAAAAA+AGG - chr4_4:69329007-69329026 Msa0698880:intron 30.0%
AAATGCTTCAGAAAAAAGGA+TGG - chr4_4:69329011-69329030 Msa0698880:intron 30.0%
GTATTTCCCTGTTCTAATAT+AGG - chr4_4:69329054-69329073 Msa0698880:intron 30.0%
CATTATCAGTTACATAGTCA+TGG + chr4_4:69329182-69329201 None:intergenic 30.0%
TTGCTGCAAAAACTAAAAGA+TGG - chr4_4:69329527-69329546 Msa0698880:intron 30.0%
TGCAAAAACTAAAAGATGGT+TGG - chr4_4:69329531-69329550 Msa0698880:intron 30.0%
AAAAACTAAAAGATGGTTGG+AGG - chr4_4:69329534-69329553 Msa0698880:intron 30.0%
AACATACCATTACTCATATG+GGG + chr4_4:69329804-69329823 None:intergenic 30.0%
GAACATACCATTACTCATAT+GGG + chr4_4:69329805-69329824 None:intergenic 30.0%
!! TATTTTTGTACCACTATGCA+TGG - chr4_4:69329853-69329872 Msa0698880:intron 30.0%
ATATACCAATACCTCCTATT+AGG + chr4_4:69330059-69330078 None:intergenic 30.0%
!! TATCACTATTTTAGAAGAGG+TGG - chr4_4:69330135-69330154 Msa0698880:CDS 30.0%
GGAGATCAAAAAAAAAAGGA+AGG + chr4_4:69330238-69330257 None:intergenic 30.0%
GGAAGGAGATCAAAAAAAAA+AGG + chr4_4:69330242-69330261 None:intergenic 30.0%
AAAGATACGAAAAACACAAG+CGG + chr4_4:69330481-69330500 None:intergenic 30.0%
CGAGTTATTGTTCTAACAAT+TGG - chr4_4:69330513-69330532 Msa0698880:CDS 30.0%
TTGGATGAATTTATTAGGGA+CGG - chr4_4:69330598-69330617 Msa0698880:CDS 30.0%
! GCTTTTTATCTTTCTATTCC+AGG - chr4_4:69330761-69330780 Msa0698880:intron 30.0%
ACATCAGAATAGAAAACTGA+GGG - chr4_4:69331055-69331074 Msa0698880:intron 30.0%
ATCAACATCTAAGTGTCTAA+TGG + chr4_4:69331123-69331142 None:intergenic 30.0%
! GTTTTGCAGAAAGAATATAC+TGG - chr4_4:69331151-69331170 Msa0698880:intron 30.0%
TGATATCTGGACTATATATC+TGG + chr4_4:69331320-69331339 None:intergenic 30.0%
TTCGAAAATCAAAACCAGAT+TGG - chr4_4:69331381-69331400 Msa0698880:intron 30.0%
AATCAATGATAAGCAAGTGA+AGG + chr4_4:69331601-69331620 None:intergenic 30.0%
ATCTTCAAAGTTAATCAAGG+TGG - chr4_4:69331648-69331667 Msa0698880:CDS 30.0%
ATTATGTTTGTCTGGCATTA+CGG - chr4_4:69331708-69331727 Msa0698880:intron 30.0%
GTGATGAAATGAGAAAAGAT+CGG + chr4_4:69331870-69331889 None:intergenic 30.0%
AAAAACAACAACAGAATGGA+TGG + chr4_4:69331904-69331923 None:intergenic 30.0%
TGTTAAGCTTGAATCTATGA+TGG - chr4_4:69332100-69332119 Msa0698880:five_prime_UTR 30.0%
GATGAATACAGTTTATATGG+AGG - chr4_4:69332140-69332159 Msa0698880:intron 30.0%
CTAACAGTGATATTCACATT+TGG + chr4_4:69332269-69332288 None:intergenic 30.0%
CAAATGTGAATATCACTGTT+AGG - chr4_4:69332267-69332286 Msa0698880:intron 30.0%
CATTTCTTAGGAAAATATGC+AGG - chr4_4:69332447-69332466 Msa0698880:intron 30.0%
! CATAAAATGACTTGTGATGA+AGG + chr4_4:69332552-69332571 None:intergenic 30.0%
!!! AGTGCTAGAATCAACTTTTT+TGG - chr4_4:69332639-69332658 Msa0698880:five_prime_UTR 30.0%
AAGAGATCAATTGAGAACTA+TGG + chr4_4:69332910-69332929 None:intergenic 30.0%
ATGCAAGATTGTTCATGTGA+AGG + chr4_4:69327331-69327350 None:intergenic 35.0%
TAGCAGATTGTACTTCATAC+AGG - chr4_4:69327497-69327516 Msa0698880:three_prime_UTR 35.0%
!! TGTTATCTGATTCTGAAGCA+AGG + chr4_4:69327527-69327546 None:intergenic 35.0%
AAGGGATAGTAGTAGAATTG+AGG - chr4_4:69328016-69328035 Msa0698880:CDS 35.0%
AGGGATAGTAGTAGAATTGA+GGG - chr4_4:69328017-69328036 Msa0698880:CDS 35.0%
AGTAGTAGAATTGAGGGAAA+AGG - chr4_4:69328023-69328042 Msa0698880:CDS 35.0%
GTGATAACAAAGGTAGTATG+TGG - chr4_4:69328100-69328119 Msa0698880:CDS 35.0%
!! TTTCTGCATTGTTGATTCTG+CGG - chr4_4:69328461-69328480 Msa0698880:CDS 35.0%
!! AAAGATGAAGAGGAAGTACT+TGG - chr4_4:69328571-69328590 Msa0698880:CDS 35.0%
GATTATCTACTCTCTTACCT+TGG - chr4_4:69328606-69328625 Msa0698880:CDS 35.0%
GTGTTAAGAGCAAATGACAA+TGG - chr4_4:69328655-69328674 Msa0698880:intron 35.0%
ATTCCCTTTGTACAATCTCA+AGG + chr4_4:69328713-69328732 None:intergenic 35.0%
GTGGGAATCATCATTACAAA+TGG + chr4_4:69328792-69328811 None:intergenic 35.0%
! GCATTTAGCAGTTGCAATTT+TGG + chr4_4:69328997-69329016 None:intergenic 35.0%
!!! GTGCATAGTTTTGTATAGAG+TGG - chr4_4:69329215-69329234 Msa0698880:intron 35.0%
AAAACTGACATTTGTAGAGC+AGG - chr4_4:69329382-69329401 Msa0698880:intron 35.0%
! TGGTTTTTATCTTTGCGTGT+CGG + chr4_4:69329438-69329457 None:intergenic 35.0%
AGCAAGGACAAGAATAAGAA+TGG + chr4_4:69329581-69329600 None:intergenic 35.0%
ATTCTTATTCTTGTCCTTGC+TGG - chr4_4:69329580-69329599 Msa0698880:intron 35.0%
! ACTAATTAGCTTCAGAGAGA+AGG + chr4_4:69329662-69329681 None:intergenic 35.0%
GGAACATACCATTACTCATA+TGG + chr4_4:69329806-69329825 None:intergenic 35.0%
AATTGTCTTGCTACAGAAGT+AGG + chr4_4:69329827-69329846 None:intergenic 35.0%
GCTTCTTTATCTTTGGATAC+AGG - chr4_4:69329922-69329941 Msa0698880:intron 35.0%
TTTATCTTTGGATACAGGTG+TGG - chr4_4:69329927-69329946 Msa0698880:intron 35.0%
!! TTTTTCAGCCTGCAACATTA+TGG - chr4_4:69329982-69330001 Msa0698880:CDS 35.0%
! TTTCTCCTAATAGGAGGTAT+TGG - chr4_4:69330051-69330070 Msa0698880:CDS 35.0%
AACATCTGTAAGTATGGAAG+CGG - chr4_4:69330081-69330100 Msa0698880:CDS 35.0%
TTTAGAAGAGGTGGAAAACA+AGG - chr4_4:69330144-69330163 Msa0698880:CDS 35.0%
GCCCAACACTAATTACATTA+AGG + chr4_4:69330263-69330282 None:intergenic 35.0%
ATAGCTCACAGTTTATGGAT+AGG - chr4_4:69330283-69330302 Msa0698880:intron 35.0%
TAGCTCACAGTTTATGGATA+GGG - chr4_4:69330284-69330303 Msa0698880:intron 35.0%
TGTATTTAAGTACTACGGTC+TGG + chr4_4:69330355-69330374 None:intergenic 35.0%
CTATTATCGCTGAAAGCTTA+GGG + chr4_4:69330392-69330411 None:intergenic 35.0%
TCTATTATCGCTGAAAGCTT+AGG + chr4_4:69330393-69330412 None:intergenic 35.0%
AGCTTTCAGCGATAATAGAA+AGG - chr4_4:69330394-69330413 Msa0698880:intron 35.0%
!! TAATAGAAAGGTACTGCACT+CGG - chr4_4:69330406-69330425 Msa0698880:intron 35.0%
CAATATTTAACCACGGAGTT+CGG + chr4_4:69330450-69330469 None:intergenic 35.0%
GAGCACACAATATTTAACCA+CGG + chr4_4:69330457-69330476 None:intergenic 35.0%
AGTAAAAAGTTCAGCTAACC+TGG + chr4_4:69330782-69330801 None:intergenic 35.0%
ACACTGACACTTTAGATTGA+AGG - chr4_4:69330833-69330852 Msa0698880:intron 35.0%
CAGGTAAGAATCTGAGAAAA+AGG + chr4_4:69330921-69330940 None:intergenic 35.0%
! TTTTCTCAGATTCTTACCTG+CGG - chr4_4:69330921-69330940 Msa0698880:intron 35.0%
! TTCTGATGTGTTGATATGCT+TGG + chr4_4:69331044-69331063 None:intergenic 35.0%
CACATCAGAATAGAAAACTG+AGG - chr4_4:69331054-69331073 Msa0698880:intron 35.0%
TATACATCAAAGAAGTTCGC+CGG - chr4_4:69331294-69331313 Msa0698880:intron 35.0%
ATAAGGACCCAATTGATATC+TGG + chr4_4:69331333-69331352 None:intergenic 35.0%
AACCAGATTGGAAATGCTTA+TGG - chr4_4:69331393-69331412 Msa0698880:intron 35.0%
TACCATAAGCATTTCCAATC+TGG + chr4_4:69331398-69331417 None:intergenic 35.0%
! CACTTGCTTATCATTGATTG+TGG - chr4_4:69331602-69331621 Msa0698880:CDS 35.0%
TCAAAGTTAATCAAGGTGGA+TGG - chr4_4:69331652-69331671 Msa0698880:CDS 35.0%
CAAAGTTAATCAAGGTGGAT+GGG - chr4_4:69331653-69331672 Msa0698880:CDS 35.0%
AATGCATAGTAAAGTCTCGA+TGG - chr4_4:69331755-69331774 Msa0698880:intron 35.0%
ATGAAATGAGAAAAGATCGG+TGG + chr4_4:69331867-69331886 None:intergenic 35.0%
AAGAGAGATACCTTGTAAAG+AGG - chr4_4:69331964-69331983 Msa0698880:CDS 35.0%
AGATACCTTGTAAAGAGGAT+TGG - chr4_4:69331969-69331988 Msa0698880:CDS 35.0%
CGAAAGATGTGGTAATTCTT+AGG + chr4_4:69331996-69332015 None:intergenic 35.0%
CAAGCTTAACAAACAGTGAA+AGG + chr4_4:69332091-69332110 None:intergenic 35.0%
! AAGCTTGAATCTATGATGGA+AGG - chr4_4:69332104-69332123 Msa0698880:five_prime_UTR 35.0%
ACAGTGATATTCACATTTGG+CGG + chr4_4:69332266-69332285 None:intergenic 35.0%
ATTAGGAAACACAGTTGTGA+TGG - chr4_4:69332373-69332392 Msa0698880:intron 35.0%
ACATTTAAGAGACTCTCATG+AGG + chr4_4:69332497-69332516 None:intergenic 35.0%
CATGAGAGTCTCTTAAATGT+TGG - chr4_4:69332497-69332516 Msa0698880:intron 35.0%
TCAAACAAAAAGGCGATCAA+CGG + chr4_4:69332701-69332720 None:intergenic 35.0%
CAAGATTGTTCATGTGAAGG+AGG + chr4_4:69327328-69327347 None:intergenic 40.0%
! GTGATGGAGAGTACAAAACT+GGG + chr4_4:69327474-69327493 None:intergenic 40.0%
! TGTGATGGAGAGTACAAAAC+TGG + chr4_4:69327475-69327494 None:intergenic 40.0%
! GTACAATCTGCTACTTGTGA+TGG + chr4_4:69327490-69327509 None:intergenic 40.0%
GATGAAGAGGGTGATAACAA+AGG - chr4_4:69328090-69328109 Msa0698880:CDS 40.0%
CAAAGGTAGTATGTGGGATT+TGG - chr4_4:69328107-69328126 Msa0698880:CDS 40.0%
TCTTCATCTTTCACACCGTT+CGG + chr4_4:69328562-69328581 None:intergenic 40.0%
!! ATATTTGAGAAGAGGCACCA+AGG + chr4_4:69328626-69328645 None:intergenic 40.0%
AGAGCAAATGACAATGGACA+AGG - chr4_4:69328661-69328680 Msa0698880:intron 40.0%
TGGTCCTTGAGATTGTACAA+AGG - chr4_4:69328706-69328725 Msa0698880:intron 40.0%
GGTCCTTGAGATTGTACAAA+GGG - chr4_4:69328707-69328726 Msa0698880:intron 40.0%
ATTGGAAATCTGTAGCAGAG+TGG - chr4_4:69328938-69328957 Msa0698880:CDS 40.0%
! CTATGTTTTGCTCAAGACCT+AGG - chr4_4:69329156-69329175 Msa0698880:intron 40.0%
AGCAAATGACCTTTCATGGA+AGG + chr4_4:69329512-69329531 None:intergenic 40.0%
TTGCAGCAAATGACCTTTCA+TGG + chr4_4:69329516-69329535 None:intergenic 40.0%
ATATGTACCTGATATAGCCG+GGG + chr4_4:69329638-69329657 None:intergenic 40.0%
CATATGTACCTGATATAGCC+GGG + chr4_4:69329639-69329658 None:intergenic 40.0%
GCATATGTACCTGATATAGC+CGG + chr4_4:69329640-69329659 None:intergenic 40.0%
CAACAGCCGATAAAACTACA+TGG + chr4_4:69329761-69329780 None:intergenic 40.0%
!!! CATGTAGTTTTATCGGCTGT+TGG - chr4_4:69329759-69329778 Msa0698880:intron 40.0%
!!! TAGTTTTATCGGCTGTTGGT+GGG - chr4_4:69329763-69329782 Msa0698880:intron 40.0%
AATCAGCCCCATATGAGTAA+TGG - chr4_4:69329795-69329814 Msa0698880:intron 40.0%
CTAAATGCTTCCATGCATAG+TGG + chr4_4:69329866-69329885 None:intergenic 40.0%
ATGGCACAGACAAAGTTAGT+TGG - chr4_4:69330001-69330020 Msa0698880:CDS 40.0%
AGAAACCAAAGGAGGACAAT+TGG + chr4_4:69330036-69330055 None:intergenic 40.0%
CTATTAGGAGAAACCAAAGG+AGG + chr4_4:69330044-69330063 None:intergenic 40.0%
! CTCCTTTGGTTTCTCCTAAT+AGG - chr4_4:69330042-69330061 Msa0698880:CDS 40.0%
CTCCTATTAGGAGAAACCAA+AGG + chr4_4:69330047-69330066 None:intergenic 40.0%
! CTTTGGTTTCTCCTAATAGG+AGG - chr4_4:69330045-69330064 Msa0698880:CDS 40.0%
GGTATCATGCTCAGTATAAC+AGG - chr4_4:69330183-69330202 Msa0698880:CDS 40.0%
TCACAGTTTATGGATAGGGT+AGG - chr4_4:69330288-69330307 Msa0698880:intron 40.0%
GATGAATTTATTAGGGACGG+AGG - chr4_4:69330601-69330620 Msa0698880:CDS 40.0%
TGTACAGCTTGCATTTACTC+TGG - chr4_4:69330661-69330680 Msa0698880:CDS 40.0%
GAATAGGCTAAAAGAAGGCA+AGG + chr4_4:69330695-69330714 None:intergenic 40.0%
! TGCCTTCTTTTAGCCTATTC+TGG - chr4_4:69330695-69330714 Msa0698880:CDS 40.0%
GTCCAGAATAGGCTAAAAGA+AGG + chr4_4:69330700-69330719 None:intergenic 40.0%
!! TAACATGTTAGTCTTGTGCC+TGG - chr4_4:69330947-69330966 Msa0698880:intron 40.0%
GAAACTATGACGCACTAACA+CGG + chr4_4:69330983-69331002 None:intergenic 40.0%
TGTTAGTGCGTCATAGTTTC+TGG - chr4_4:69330983-69331002 Msa0698880:intron 40.0%
TGCAGAAAGAATATACTGGC+CGG - chr4_4:69331155-69331174 Msa0698880:intron 40.0%
GCTGTTGCAACAACAAATAC+CGG + chr4_4:69331177-69331196 None:intergenic 40.0%
!! GGTATTTGTTGTTGCAACAG+CGG - chr4_4:69331176-69331195 Msa0698880:intron 40.0%
ATCTGGACTATATATCTGGC+CGG + chr4_4:69331316-69331335 None:intergenic 40.0%
CGGCAATGCAAAGAATCATA+AGG + chr4_4:69331350-69331369 None:intergenic 40.0%
! TTTGTTAACAGGTACTGCAG+TGG - chr4_4:69331494-69331513 Msa0698880:CDS 40.0%
ATAGTAAAGTCTCGATGGCA+TGG - chr4_4:69331760-69331779 Msa0698880:intron 40.0%
CACGAACAAGTCCTAAACTT+GGG + chr4_4:69331800-69331819 None:intergenic 40.0%
ACACGAACAAGTCCTAAACT+TGG + chr4_4:69331801-69331820 None:intergenic 40.0%
! ACAAGGTATCTCTCTTCTTC+CGG + chr4_4:69331960-69331979 None:intergenic 40.0%
TAGGTCCAATCCTCTTTACA+AGG + chr4_4:69331977-69331996 None:intergenic 40.0%
TTACCACATCTTTCGATGTG+TGG - chr4_4:69332001-69332020 Msa0698880:CDS 40.0%
AATATCACTGTTAGGTCCTG+CGG - chr4_4:69332275-69332294 Msa0698880:intron 40.0%
! AAATTCAAGTTCATCCCCCT+CGG + chr4_4:69332318-69332337 None:intergenic 40.0%
TACCTCAACTTTGCATAGGA+TGG + chr4_4:69332579-69332598 None:intergenic 40.0%
CACTTACCTCAACTTTGCAT+AGG + chr4_4:69332583-69332602 None:intergenic 40.0%
CGACTAAAACGACATAACTG+TGG - chr4_4:69332730-69332749 Msa0698880:five_prime_UTR 40.0%
ACTAATTGTGATGCTTCACG+TGG - chr4_4:69332935-69332954 Msa0698880:five_prime_UTR 40.0%
!! AGAGCAGAGTCTTGTTGTTG+TGG + chr4_4:69327255-69327274 None:intergenic 45.0%
!! GTCGTTTTGCTCAGCTTGTT+AGG + chr4_4:69327293-69327312 None:intergenic 45.0%
GTTCATGTGAAGGAGGATTG+TGG + chr4_4:69327321-69327340 None:intergenic 45.0%
GCTGAAAATGGCTTCAAGAG+TGG - chr4_4:69328062-69328081 Msa0698880:CDS 45.0%
AAGAGTGGACACTGATGAAG+AGG - chr4_4:69328077-69328096 Msa0698880:CDS 45.0%
AGAGTGGACACTGATGAAGA+GGG - chr4_4:69328078-69328097 Msa0698880:CDS 45.0%
GGCGTGGTTTATGGAGATTT+AGG - chr4_4:69328502-69328521 Msa0698880:CDS 45.0%
GAACGGTGTGAAAGATGAAG+AGG - chr4_4:69328561-69328580 Msa0698880:CDS 45.0%
ATAGCATGCTATAGCGGCAT+TGG - chr4_4:69328910-69328929 Msa0698880:CDS 45.0%
CAGTTACATAGTCATGGCCT+AGG + chr4_4:69329176-69329195 None:intergenic 45.0%
ACTGACATTTGTAGAGCAGG+TGG - chr4_4:69329385-69329404 Msa0698880:intron 45.0%
GTCGTTCTACCTTCCATGAA+AGG - chr4_4:69329500-69329519 Msa0698880:CDS 45.0%
ATTCTTACCCCGGCTATATC+AGG - chr4_4:69329628-69329647 Msa0698880:intron 45.0%
!!! GTAGTTTTATCGGCTGTTGG+TGG - chr4_4:69329762-69329781 Msa0698880:intron 45.0%
TGTCTGTGCCATAATGTTGC+AGG + chr4_4:69329993-69330012 None:intergenic 45.0%
TTGCTCCAATTGTCCTCCTT+TGG - chr4_4:69330028-69330047 Msa0698880:CDS 45.0%
GAAGAGGTGGAAAACAAGGA+TGG - chr4_4:69330148-69330167 Msa0698880:CDS 45.0%
! AAACAAGGATGGACTTCCCT+TGG - chr4_4:69330159-69330178 Msa0698880:CDS 45.0%
ACTGAGCATGATACCACCAA+GGG + chr4_4:69330178-69330197 None:intergenic 45.0%
TACTGAGCATGATACCACCA+AGG + chr4_4:69330179-69330198 None:intergenic 45.0%
TGGGCATAGCTCACAGTTTA+TGG - chr4_4:69330278-69330297 Msa0698880:intron 45.0%
GACCGGAAAATGAGATAGGT+CGG + chr4_4:69330636-69330655 None:intergenic 45.0%
CTGAGACCGGAAAATGAGAT+AGG + chr4_4:69330640-69330659 None:intergenic 45.0%
GTATGCAGCTTGTCCAGAAT+AGG + chr4_4:69330711-69330730 None:intergenic 45.0%
GTGAATCTAGTGTCCAACAC+CGG - chr4_4:69330855-69330874 Msa0698880:intron 45.0%
GACTAACATGTTAACACCGC+AGG + chr4_4:69330940-69330959 None:intergenic 45.0%
ATGTTGCAGTTATTGTCGCC+TGG + chr4_4:69331218-69331237 None:intergenic 45.0%
ATTAAGCAAGCCCTTGCTCA+TGG - chr4_4:69331246-69331265 Msa0698880:intron 45.0%
AGGGAAACAACCATGAGCAA+GGG + chr4_4:69331259-69331278 None:intergenic 45.0%
TAGGGAAACAACCATGAGCA+AGG + chr4_4:69331260-69331279 None:intergenic 45.0%
GATTCTTTGCATTGCCGTCA+CGG - chr4_4:69331353-69331372 Msa0698880:intron 45.0%
TGGGTTCCTCTTGTAATTGC+CGG - chr4_4:69331672-69331691 Msa0698880:CDS 45.0%
AACACTCCGGCAATTACAAG+AGG + chr4_4:69331681-69331700 None:intergenic 45.0%
! TTAGGACTTGTTCGTGTACC+TGG - chr4_4:69331804-69331823 Msa0698880:intron 45.0%
CTTGTTCGTGTACCTGGAAT+CGG - chr4_4:69331810-69331829 Msa0698880:intron 45.0%
GTCTACACAGAACTTGCAAG+TGG - chr4_4:69331837-69331856 Msa0698880:intron 45.0%
ACAACAACAGAATGGATGGC+TGG + chr4_4:69331900-69331919 None:intergenic 45.0%
! CAAGGTATCTCTCTTCTTCC+GGG + chr4_4:69331959-69331978 None:intergenic 45.0%
ACATCTTTCGATGTGTGGCA+CGG - chr4_4:69332006-69332025 Msa0698880:CDS 45.0%
ACTCTTCGTCTTTCTTGTGC+AGG + chr4_4:69332046-69332065 None:intergenic 45.0%
CAGTTTATATGGAGGACAGC+AGG - chr4_4:69332148-69332167 Msa0698880:intron 45.0%
TTATATGGAGGACAGCAGGA+TGG - chr4_4:69332152-69332171 Msa0698880:intron 45.0%
AAGCACGACTTCTTCGAATG+TGG - chr4_4:69332193-69332212 Msa0698880:intron 45.0%
GTGATATTCACATTTGGCGG+CGG + chr4_4:69332263-69332282 None:intergenic 45.0%
GAAACACAGTTGTGATGGCA+AGG - chr4_4:69332378-69332397 Msa0698880:intron 45.0%
! TGACTTGTGATGAAGGGCAT+GGG + chr4_4:69332545-69332564 None:intergenic 45.0%
! ATGACTTGTGATGAAGGGCA+TGG + chr4_4:69332546-69332565 None:intergenic 45.0%
TGCCATCCTATGCAAAGTTG+AGG - chr4_4:69332574-69332593 Msa0698880:intron 45.0%
GAACAACATCACCTTGCTTG+CGG - chr4_4:69332611-69332630 Msa0698880:intron 45.0%
TCAGAAGCTTGACCAGCCTA+TGG - chr4_4:69328131-69328150 Msa0698880:CDS 50.0%
CGGCTTGCATATCAGAGTCT+TGG - chr4_4:69328481-69328500 Msa0698880:CDS 50.0%
TGCATATCAGAGTCTTGGCG+TGG - chr4_4:69328486-69328505 Msa0698880:CDS 50.0%
CAGAGTCTTGGCGTGGTTTA+TGG - chr4_4:69328493-69328512 Msa0698880:CDS 50.0%
!! ATAGCGGCATTGGCTGCTAT+TGG - chr4_4:69328920-69328939 Msa0698880:CDS 50.0%
!! GAGTGGTTTGCTGCATTAGC+TGG - chr4_4:69328955-69328974 Msa0698880:intron 50.0%
! TCATCGGTGCGATGCTGATT+GGG + chr4_4:69329463-69329482 None:intergenic 50.0%
TTCATCGGTGCGATGCTGAT+TGG + chr4_4:69329464-69329483 None:intergenic 50.0%
GGTTGGAGGAACGTGAATCA+TGG - chr4_4:69329548-69329567 Msa0698880:intron 50.0%
ACCTGCATGGTAATCGGAGA+CGG - chr4_4:69329604-69329623 Msa0698880:intron 50.0%
! ATCGGCTGTTGGTGGGATTA+AGG - chr4_4:69329770-69329789 Msa0698880:intron 50.0%
CTCGGAGACGTAGGCATAAT+TGG - chr4_4:69330424-69330443 Msa0698880:intron 50.0%
! CGCCGACCTATCTCATTTTC+CGG - chr4_4:69330631-69330650 Msa0698880:CDS 50.0%
! ATTTTCGAACCCTGCCGTGA+CGG + chr4_4:69331370-69331389 None:intergenic 50.0%
AGGCGAGTACAAGAATCCAG+TGG + chr4_4:69331581-69331600 None:intergenic 50.0%
GTCTCGATGGCATGGATTCT+CGG - chr4_4:69331768-69331787 Msa0698880:intron 50.0%
TCTCGATGGCATGGATTCTC+GGG - chr4_4:69331769-69331788 Msa0698880:intron 50.0%
! GTGTAGACTAGTCCGATTCC+AGG + chr4_4:69331825-69331844 None:intergenic 50.0%
AGAATGGATGGCTGGTAGGT+TGG + chr4_4:69331892-69331911 None:intergenic 50.0%
CAACAGAATGGATGGCTGGT+AGG + chr4_4:69331896-69331915 None:intergenic 50.0%
GTATCTCTCTTCTTCCGGGA+CGG + chr4_4:69331955-69331974 None:intergenic 50.0%
GTGCCACACATCGAAAGATG+TGG + chr4_4:69332007-69332026 None:intergenic 50.0%
TTTCGATGTGTGGCACGGTA+TGG - chr4_4:69332011-69332030 Msa0698880:CDS 50.0%
TCAAGTAAGTGGCCAAACCG+AGG - chr4_4:69332298-69332317 Msa0698880:intron 50.0%
CAAGTAAGTGGCCAAACCGA+GGG - chr4_4:69332299-69332318 Msa0698880:intron 50.0%
AAGTAAGTGGCCAAACCGAG+GGG - chr4_4:69332300-69332319 Msa0698880:intron 50.0%
TTGAATAACTGCAGGGACGC+TGG - chr4_4:69332338-69332357 Msa0698880:intron 50.0%
TGAATAACTGCAGGGACGCT+GGG - chr4_4:69332339-69332358 Msa0698880:intron 50.0%
GCTGGGGTGGTTCACATATT+AGG - chr4_4:69332356-69332375 Msa0698880:intron 50.0%
ACACAGTTGTGATGGCAAGG+AGG - chr4_4:69332381-69332400 Msa0698880:intron 50.0%
CACAGTTGTGATGGCAAGGA+GGG - chr4_4:69332382-69332401 Msa0698880:intron 50.0%
!! AGCACTGATTACCGCAAGCA+AGG + chr4_4:69332625-69332644 None:intergenic 50.0%
GAAGCTTGACCAGCCTATGG+AGG - chr4_4:69328134-69328153 Msa0698880:CDS 55.0%
TGACCAGCCTATGGAGGAAG+AGG - chr4_4:69328140-69328159 Msa0698880:CDS 55.0%
CTTCCTGCCTCTTCCTCCAT+AGG + chr4_4:69328150-69328169 None:intergenic 55.0%
AGGAAGAGGCAGGAAGACTC+AGG - chr4_4:69328154-69328173 Msa0698880:CDS 55.0%
! GGTGCGATGCTGATTGGGAA+TGG + chr4_4:69329458-69329477 None:intergenic 55.0%
TTACCATGCAGGTGCCAGCA+AGG + chr4_4:69329597-69329616 None:intergenic 55.0%
GCTGGCACCTGCATGGTAAT+CGG - chr4_4:69329598-69329617 Msa0698880:intron 55.0%
CCTGCATGGTAATCGGAGAC+GGG - chr4_4:69329605-69329624 Msa0698880:intron 55.0%
! CAAGGATGGACTTCCCTTGG+TGG - chr4_4:69330162-69330181 Msa0698880:CDS 55.0%
GGTCATTGAGCCCTGTGGTA+CGG - chr4_4:69330309-69330328 Msa0698880:intron 55.0%
TACCCCTGAACCGTACCACA+GGG + chr4_4:69330322-69330341 None:intergenic 55.0%
TTACCCCTGAACCGTACCAC+AGG + chr4_4:69330323-69330342 None:intergenic 55.0%
GCATAATTGGCCGAACTCCG+TGG - chr4_4:69330437-69330456 Msa0698880:intron 55.0%
GCAAGCTGTACAGCTGAGAC+CGG + chr4_4:69330653-69330672 None:intergenic 55.0%
CCACATGTGTCTGTGTGTGC+CGG + chr4_4:69330877-69330896 None:intergenic 55.0%
TAACACGGACACGAGACACC+AGG + chr4_4:69330968-69330987 None:intergenic 55.0%
! TGTCGCCTGGCTTGCAACTA+TGG + chr4_4:69331205-69331224 None:intergenic 55.0%
TTTGCATTGCCGTCACGGCA+GGG - chr4_4:69331358-69331377 Msa0698880:intron 55.0%
ATGGCATGGATTCTCGGGCT+TGG - chr4_4:69331774-69331793 Msa0698880:intron 55.0%
CCTTCCTGTTTACACCGTCC+CGG - chr4_4:69331938-69331957 Msa0698880:intron 55.0%
TCTTCCGGGACGGTGTAAAC+AGG + chr4_4:69331945-69331964 None:intergenic 55.0%
AGGTCCTGCGGTCAAGTAAG+TGG - chr4_4:69332287-69332306 Msa0698880:intron 55.0%
TTGGCCACTTACTTGACCGC+AGG + chr4_4:69332294-69332313 None:intergenic 55.0%
AGTAAGTGGCCAAACCGAGG+GGG - chr4_4:69332301-69332320 Msa0698880:intron 55.0%
CAAGTTCATCCCCCTCGGTT+TGG + chr4_4:69332313-69332332 None:intergenic 55.0%
GAATAACTGCAGGGACGCTG+GGG - chr4_4:69332340-69332359 Msa0698880:intron 55.0%
! CTTGTGATGAAGGGCATGGG+AGG + chr4_4:69332542-69332561 None:intergenic 55.0%
CTGCCTCTTCCTCCATAGGC+TGG + chr4_4:69328146-69328165 None:intergenic 60.0%
CAGCCTATGGAGGAAGAGGC+AGG - chr4_4:69328144-69328163 Msa0698880:CDS 60.0%
TGTCCTTGCTGGCACCTGCA+TGG - chr4_4:69329591-69329610 Msa0698880:intron 60.0%
CCCGTCTCCGATTACCATGC+AGG + chr4_4:69329608-69329627 None:intergenic 60.0%
CGGAGACGGGATTCTTACCC+CGG - chr4_4:69329618-69329637 Msa0698880:intron 60.0%
GGGTAGGTCATTGAGCCCTG+TGG - chr4_4:69330304-69330323 Msa0698880:intron 60.0%
TGAGCCCTGTGGTACGGTTC+AGG - chr4_4:69330315-69330334 Msa0698880:intron 60.0%
GAGCCCTGTGGTACGGTTCA+GGG - chr4_4:69330316-69330335 Msa0698880:intron 60.0%
AGCCCTGTGGTACGGTTCAG+GGG - chr4_4:69330317-69330336 Msa0698880:intron 60.0%
GGTACTGCACTCGGAGACGT+AGG - chr4_4:69330415-69330434 Msa0698880:intron 60.0%
! GTGTCTGTGTGTGCCGGTGT+TGG + chr4_4:69330871-69330890 None:intergenic 60.0%
CCGGCACACACAGACACATG+TGG - chr4_4:69330874-69330893 Msa0698880:intron 60.0%
GGCAGCCATAGTTGCAAGCC+AGG - chr4_4:69331197-69331216 Msa0698880:intron 60.0%
CTTTGCATTGCCGTCACGGC+AGG - chr4_4:69331357-69331376 Msa0698880:intron 60.0%
TATTGGTGTGGCGCTGCCAC+TGG - chr4_4:69331562-69331581 Msa0698880:CDS 60.0%
CTCGGGCTTGGCCCAAGTTT+AGG - chr4_4:69331786-69331805 Msa0698880:intron 60.0%
CCGGGACGGTGTAAACAGGA+AGG + chr4_4:69331941-69331960 None:intergenic 60.0%
TAACTGCAGGGACGCTGGGG+TGG - chr4_4:69332343-69332362 Msa0698880:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 69327193 69332964 69327193 ID=Msa0698880;Name=Msa0698880
chr4_4 mRNA 69327193 69332964 69327193 ID=Msa0698880-mRNA-1;Parent=Msa0698880;Name=Msa0698880-mRNA-1;_AED=0.17;_eAED=0.17;_QI=376|0.7|0.63|1|0.4|0.27|11|367|743
chr4_4 exon 69327193 69327237 69327193 ID=Msa0698880-mRNA-1:exon:20801;Parent=Msa0698880-mRNA-1
chr4_4 exon 69327297 69328652 69327297 ID=Msa0698880-mRNA-1:exon:20800;Parent=Msa0698880-mRNA-1
chr4_4 exon 69328743 69328961 69328743 ID=Msa0698880-mRNA-1:exon:20799;Parent=Msa0698880-mRNA-1
chr4_4 exon 69328981 69328997 69328981 ID=Msa0698880-mRNA-1:exon:20798;Parent=Msa0698880-mRNA-1
chr4_4 exon 69329470 69329542 69329470 ID=Msa0698880-mRNA-1:exon:20797;Parent=Msa0698880-mRNA-1
chr4_4 exon 69329974 69330213 69329974 ID=Msa0698880-mRNA-1:exon:20796;Parent=Msa0698880-mRNA-1
chr4_4 exon 69330341 69330391 69330341 ID=Msa0698880-mRNA-1:exon:20795;Parent=Msa0698880-mRNA-1
chr4_4 exon 69330508 69330753 69330508 ID=Msa0698880-mRNA-1:exon:20794;Parent=Msa0698880-mRNA-1
chr4_4 exon 69331475 69331700 69331475 ID=Msa0698880-mRNA-1:exon:20793;Parent=Msa0698880-mRNA-1
chr4_4 exon 69331963 69332138 69331963 ID=Msa0698880-mRNA-1:exon:20792;Parent=Msa0698880-mRNA-1
chr4_4 exon 69332639 69332964 69332639 ID=Msa0698880-mRNA-1:exon:20791;Parent=Msa0698880-mRNA-1
chr4_4 five_prime_UTR 69332639 69332964 69332639 ID=Msa0698880-mRNA-1:five_prime_utr;Parent=Msa0698880-mRNA-1
chr4_4 five_prime_UTR 69332089 69332138 69332089 ID=Msa0698880-mRNA-1:five_prime_utr;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69331963 69332088 69331963 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69331475 69331700 69331475 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69330508 69330753 69330508 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69330341 69330391 69330341 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69329974 69330213 69329974 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69329470 69329542 69329470 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69328981 69328997 69328981 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69328743 69328961 69328743 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 CDS 69327619 69328652 69327619 ID=Msa0698880-mRNA-1:cds;Parent=Msa0698880-mRNA-1
chr4_4 three_prime_UTR 69327297 69327618 69327297 ID=Msa0698880-mRNA-1:three_prime_utr;Parent=Msa0698880-mRNA-1
chr4_4 three_prime_UTR 69327193 69327237 69327193 ID=Msa0698880-mRNA-1:three_prime_utr;Parent=Msa0698880-mRNA-1
Gene Sequence

>Msa0698880

ATGGCTTCAAGAGTGGACACTGATGAAGAGGGTGATAACAAAGGTAGTATGTGGGATTTGGATCAGAAGCTTGACCAGCCTATGGAGGAAGAGGCAGGAAGACTCAGGAATATGTACAGAGAAAAAAAATTTTCTGCATTGTTGATTCTGCGGCTTGCATATCAGAGTCTTGGCGTGGTTTATGGAGATTTAGGCACTTCACCTTTGTATGTTTTCTACAACATATTTCCGAACGGTGTGAAAGATGAAGAGGAAGTACTTGGAGCTCTTTCTTTGATTATCTACTCTCTTACCTTGGTGCCTCTTCTCAAATATGTTTTTATTGTGTTAAGAGCAAATGACAATGGACAAGGTGGAACATTTGCGCTTTATTCTTTGCTTTGCCGACACGCAAAGATAAAAACCATTCCCAATCAGCATCGCACCGATGAAGAACTAACAACATATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACTAAAAGATGGTTGGAGGAACGTGAATCATGGAAGAGTGCCATTCTTATTCTTGTCCTTGCTGGCACCTGCATGGTAATCGGAGACGGGATTCTTACCCCGGCTATATCAGTTTTATCGGCTGTTGGTGGGATTAAGGTAAATCAGCCCCATATGAGTAATGGTGTGGTAGTTCTGATTGCTGTTGTAATATTAGTTGGATTTTTCAGCCTGCAACATTATGGCACAGACAAAGTTAGTTGGCTCTTTGCTCCAATTGTCCTCCTTTGGTTTCTCCTAATAGGAGGTATTGGTATATTTAACATCTGTAAGTATGGAAGCGGAGTTCTAAAAGCCTTTTCTCCTGTTTACATATATCACTATTTTAGAAGAGGTGGAAAACAAGGATGGACTTCCCTTGGTGGGACGGAGGCTCTTTTCGCCGACCTATCTCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTGGTTGTAAAGAATATACTGGCCGCGGCAGCCATAGTTGCAAGCCAGGCGACAATAACTGCAACATTTTCGATTATTAAGCAAGCCCTTGCTCATGGTTGTTTCCCTAGAGTTAAAGTTGTATATACATCAAAGAAGTTCGCCGGCCAGATATATAGTCCAGATATCAATTGGGTCCTTATGATTCTTTGCATTGCCGTCACGGCAGGGTTCGAAAATCAAAACCAGATTGGAAATGCTTATGGTACTGCAGTGGTGATTGTCTTTCTCGTTACTACATTCCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCACTGGATTCTTGTACTCGCCTTCACTTGCTTATCATTGATTGTGGAATTGTCATACTTCTTCTCTGTAATCTTCAAAGTTAATCAAGGTGGATGGGTTCCTCTTGTAATTGCCGGAGTGTTTTTTATCATTATGTTTGTCTGGCATTACGGTACAGTGAAACGCTACGAATTTGAAATGCATAGTAAAGTCTCGATGGCATGGATTCTCGGGCTTGGCCCAAGTTTAGGACTTGTTCGTGTACCTGGAATCGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCACCGATCTTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCTGTTGTTGTTTTTGTATGCGTCAAATACCTTCCTGTTTACACCGTCCCGGAAGAAGAGAGATACCTTGTAAAGAGGATTGGACCTAAGAATTACCACATCTTTCGATGTGTGGCACGGTATGGCTACAAAGACCTGCACAAGAAAGACGAAGAGTTTGAGAAAAAACTCTTTGATAACCTTTCACTGTTTGTTAAGCTTGAATCTATGATGGAAGGTTGTTCAGACTCAGATGAATACAGTTTATATGGAGGACAGCAGGATGGCGTGTTGAATAACAACGGAAGCACGACTTCTTCGAATGTGGAGTTAACAATTAACTCGATAGATTCAATAGTACAAGTTCGATCACCGCCGCCAAATGTGAATATCACTGTTAGGTCCTGCGGTCAAGTAAGTGGCCAAACCGAGGGGGATGAACTTGAATTTTTGAATAACTGCAGGGACGCTGGGGTGGTTCACATATTAGGAAACACAGTTGTGATGGCAAGGAGGGATTCAAATATTTTCAAGAAAGTAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATATTCTATGTATAG
Protein sequence

>Msa0698880

MASRVDTDEEGDNKGSMWDLDQKLDQPMEEEAGRLRNMYREKKFSALLILRLAYQSLGVVYGDLGTSPLYVFYNIFPNGVKDEEEVLGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEERESWKSAILILVLAGTCMVIGDGILTPAISVLSAVGGIKVNQPHMSNGVVVLIAVVILVGFFSLQHYGTDKVSWLFAPIVLLWFLLIGGIGIFNICKYGSGVLKAFSPVYIYHYFRRGGKQGWTSLGGTEALFADLSHFPVSAVQLAFTLVVKNILAAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKKFAGQIYSPDINWVLMILCIAVTAGFENQNQIGNAYGTAVVIVFLVTTFLMILIMILVWRCHWILVLAFTCLSLIVELSYFFSVIFKVNQGGWVPLVIAGVFFIIMFVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERYLVKRIGPKNYHIFRCVARYGYKDLHKKDEEFEKKLFDNLSLFVKLESMMEGCSDSDEYSLYGGQQDGVLNNNGSTTSSNVELTINSIDSIVQVRSPPPNVNITVRSCGQVSGQTEGDELEFLNNCRDAGVVHILGNTVVMARRDSNIFKKVAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV*