AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0371620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371620 MtrunA17_Chr3g0118771 93.561 497 29 1 1 497 1 494 0.0 975
Msa0371620 MtrunA17_Chr3g0118711 81.705 481 88 0 16 496 5 485 0.0 846
Msa0371620 MtrunA17_Chr3g0118751 86.164 477 37 2 21 497 3 450 0.0 846
Msa0371620 MtrunA17_Chr3g0118691 81.781 483 87 1 16 497 6 488 0.0 845
Msa0371620 MtrunA17_Chr3g0118671 81.092 476 90 0 21 496 3 478 0.0 834
Msa0371620 MtrunA17_Chr3g0118701 79.917 483 96 1 16 497 6 488 0.0 830
Msa0371620 MtrunA17_Chr3g0118661 66.458 480 160 1 18 497 7 485 0.0 651
Msa0371620 MtrunA17_Chr5g0426431 55.414 471 204 5 24 492 12 478 0.0 551
Msa0371620 MtrunA17_Chr3g0092641 54.449 472 209 5 23 492 11 478 0.0 543
Msa0371620 MtrunA17_Chr3g0118721 83.729 295 48 0 203 497 1 295 0.0 535
Msa0371620 MtrunA17_Chr3g0078841 50.628 478 232 3 17 492 3 478 0.0 516
Msa0371620 MtrunA17_Chr6g0454191 50.622 482 229 5 17 492 3 481 9.69e-179 510
Msa0371620 MtrunA17_Chr6g0454341 49.372 478 238 3 17 492 3 478 3.34e-178 509
Msa0371620 MtrunA17_Chr2g0278711 50.630 476 227 5 20 492 7 477 1.25e-175 502
Msa0371620 MtrunA17_Chr6g0454331 51.046 478 224 4 22 492 5 479 3.12e-175 501
Msa0371620 MtrunA17_Chr6g0454401 50.522 479 228 4 20 492 6 481 1.46e-173 497
Msa0371620 MtrunA17_Chr6g0454321 48.643 479 239 4 17 493 3 476 3.37e-172 499
Msa0371620 MtrunA17_Chr6g0454321 47.552 143 66 3 17 150 493 635 6.02e-30 123
Msa0371620 MtrunA17_Chr4g0050341 48.057 489 250 2 7 491 2 490 6.16e-172 493
Msa0371620 MtrunA17_Chr6g0453951 49.583 480 234 4 18 492 51 527 9.19e-172 494
Msa0371620 MtrunA17_Chr8g0336331 49.791 478 235 4 17 492 3 477 1.90e-171 491
Msa0371620 MtrunA17_Chr6g0454301 50.418 478 233 3 17 492 256 731 1.20e-170 499
Msa0371620 MtrunA17_Chr6g0454301 54.585 229 101 2 262 490 3 228 1.67e-84 276
Msa0371620 MtrunA17_Chr6g0454201 52.521 476 218 5 22 492 9 481 1.02e-169 487
Msa0371620 MtrunA17_Chr6g0454181 47.817 481 243 4 17 492 3 480 2.00e-169 486
Msa0371620 MtrunA17_Chr6g0454211 50.734 477 227 4 21 492 294 767 2.14e-167 491
Msa0371620 MtrunA17_Chr6g0454211 33.714 350 147 4 142 491 3 267 3.10e-56 200
Msa0371620 MtrunA17_Chr6g0453961 48.776 490 242 5 9 492 4 490 4.64e-167 481
Msa0371620 MtrunA17_Chr6g0454361 50.000 476 230 4 22 492 9 481 7.99e-167 480
Msa0371620 MtrunA17_Chr6g0454291 50.105 477 230 4 21 492 4 477 4.22e-165 475
Msa0371620 MtrunA17_Chr8g0359821 47.808 479 244 3 17 492 3 478 5.23e-165 475
Msa0371620 MtrunA17_Chr6g0454351 48.125 480 224 5 18 492 6 465 8.51e-164 472
Msa0371620 MtrunA17_Chr6g0452771 48.233 481 241 4 17 492 3 480 4.75e-158 457
Msa0371620 MtrunA17_Chr6g0454151 47.521 484 244 5 17 495 3 481 1.98e-156 453
Msa0371620 MtrunA17_Chr6g0454261 46.985 481 247 4 17 492 3 480 2.29e-156 453
Msa0371620 MtrunA17_Chr6g0454141 46.154 481 251 4 17 492 3 480 5.24e-155 450
Msa0371620 MtrunA17_Chr6g0454121 46.667 480 249 4 17 492 3 479 1.80e-153 446
Msa0371620 MtrunA17_Chr6g0454131 46.042 480 252 4 17 492 3 479 6.11e-151 439
Msa0371620 MtrunA17_Chr7g0217881 46.541 477 229 5 21 492 7 462 8.95e-150 436
Msa0371620 MtrunA17_Chr5g0423981 46.541 477 210 7 22 492 8 445 9.01e-146 425
Msa0371620 MtrunA17_Chr6g0454251 47.342 395 200 4 21 410 4 395 5.91e-135 395
Msa0371620 MtrunA17_Chr5g0426401 52.244 312 142 5 184 492 4 311 1.07e-113 338
Msa0371620 MtrunA17_Chr6g0454271 52.414 290 135 2 203 492 1 287 1.54e-106 319
Msa0371620 MtrunA17_Chr8g0355011 39.394 396 190 5 102 492 12 362 4.00e-99 303
Msa0371620 MtrunA17_Chr5g0412131 35.685 482 270 11 23 489 11 467 1.84e-92 289
Msa0371620 MtrunA17_Chr3g0112771 35.169 472 270 10 25 492 13 452 7.52e-91 285
Msa0371620 MtrunA17_Chr6g0454221 54.077 233 105 2 262 494 3 233 4.19e-88 272
Msa0371620 MtrunA17_Chr6g0454171 40.476 336 149 5 161 492 22 310 8.79e-88 272
Msa0371620 MtrunA17_Chr5g0412111 34.091 484 278 11 21 489 2 459 1.01e-87 276
Msa0371620 MtrunA17_Chr5g0412101 34.855 482 275 10 23 489 11 468 1.11e-86 274
Msa0371620 MtrunA17_Chr3g0112761 35.169 472 274 11 24 492 8 450 3.75e-86 272
Msa0371620 MtrunA17_Chr4g0032331 33.471 484 278 12 22 496 6 454 1.39e-77 250
Msa0371620 MtrunA17_Chr5g0414331 32.033 487 274 12 24 495 13 457 1.92e-74 242
Msa0371620 MtrunA17_Chr7g0249981 30.879 489 290 12 20 497 21 472 4.19e-74 242
Msa0371620 MtrunA17_Chr5g0414321 31.633 490 286 13 17 495 4 455 1.52e-72 237
Msa0371620 MtrunA17_Chr6g0464921 31.120 482 293 10 18 491 5 455 2.11e-72 236
Msa0371620 MtrunA17_Chr6g0464881 30.943 488 283 11 20 492 7 455 4.00e-72 236
Msa0371620 MtrunA17_Chr7g0250001 29.832 476 300 9 22 493 4 449 5.63e-72 235
Msa0371620 MtrunA17_Chr8g0336271 46.091 243 128 2 17 257 3 244 3.92e-69 222
Msa0371620 MtrunA17_Chr3g0118731 92.727 110 8 0 76 185 28 137 5.58e-69 218
Msa0371620 MtrunA17_Chr8g0365811 31.325 498 286 16 5 480 483 946 1.65e-68 236
Msa0371620 MtrunA17_Chr8g0365811 28.842 475 284 14 19 466 3 450 2.55e-56 202
Msa0371620 MtrunA17_Chr3g0098111 28.776 490 319 11 20 497 4 475 6.58e-68 225
Msa0371620 MtrunA17_Chr6g0464871 31.106 479 290 11 24 494 23 469 9.66e-68 224
Msa0371620 MtrunA17_Chr7g0218831 31.847 471 277 12 23 488 5 436 1.17e-67 224
Msa0371620 MtrunA17_Chr7g0218821 30.753 478 285 13 23 488 4 447 2.10e-67 223
Msa0371620 MtrunA17_Chr7g0218811 30.149 471 286 12 23 488 14 446 3.58e-67 223
Msa0371620 MtrunA17_Chr7g0218841 31.992 472 276 13 23 488 5 437 4.95e-67 222
Msa0371620 MtrunA17_Chr6g0464841 31.524 479 282 12 24 491 11 454 6.92e-67 222
Msa0371620 MtrunA17_Chr1g0207861 30.833 480 301 12 24 491 8 468 3.38e-66 221
Msa0371620 MtrunA17_Chr7g0218791 31.120 482 279 15 23 490 4 446 3.66e-66 220
Msa0371620 MtrunA17_Chr1g0207971 29.314 481 298 12 24 494 8 456 4.86e-65 217
Msa0371620 MtrunA17_Chr1g0161351 29.600 500 314 13 9 491 19 497 1.63e-64 217
Msa0371620 MtrunA17_Chr1g0207981 30.290 482 302 10 24 492 13 473 7.62e-64 215
Msa0371620 MtrunA17_Chr6g0464861 31.590 478 284 12 23 491 10 453 1.00e-63 214
Msa0371620 MtrunA17_Chr6g0454371 54.070 172 78 1 321 492 1 171 3.23e-63 203
Msa0371620 MtrunA17_Chr6g0454231 45.259 232 125 1 20 249 246 477 7.98e-63 212
Msa0371620 MtrunA17_Chr6g0454231 42.188 256 106 4 238 492 5 219 9.01e-59 201
Msa0371620 MtrunA17_Chr4g0044511 30.539 501 293 14 17 491 33 504 8.02e-63 213
Msa0371620 MtrunA17_Chr1g0207951 29.940 501 307 13 3 494 108 573 2.19e-62 220
Msa0371620 MtrunA17_Chr1g0207951 27.907 516 315 15 2 497 636 1114 4.09e-58 207
Msa0371620 MtrunA17_Chr5g0426411 56.707 164 70 1 21 183 9 172 6.39e-62 200
Msa0371620 MtrunA17_Chr1g0207831 29.459 499 288 14 25 497 9 469 3.33e-61 207
Msa0371620 MtrunA17_Chr8g0377921 29.218 486 297 13 23 488 2 460 6.16e-60 204
Msa0371620 MtrunA17_Chr6g0453981 40.948 232 134 2 142 373 3 231 1.02e-58 193
Msa0371620 MtrunA17_Chr3g0121991 30.081 492 303 16 20 491 75 545 1.18e-58 202
Msa0371620 MtrunA17_Chr3g0122001 29.039 489 312 13 20 491 482 952 2.90e-57 204
Msa0371620 MtrunA17_Chr3g0122001 29.065 492 309 13 20 491 2 473 5.08e-56 201
Msa0371620 MtrunA17_Chr8g0380531 27.673 477 307 13 24 491 10 457 3.03e-57 197
Msa0371620 MtrunA17_Chr4g0053321 29.268 492 304 14 20 495 20 483 1.22e-56 196
Msa0371620 MtrunA17_Chr5g0401721 28.138 494 305 17 25 495 9 475 1.33e-56 195
Msa0371620 MtrunA17_Chr7g0249931 28.333 480 300 12 24 493 40 485 2.09e-56 195
Msa0371620 MtrunA17_Chr5g0393591 29.854 479 265 11 24 491 17 435 2.30e-56 194
Msa0371620 MtrunA17_Chr4g0053501 29.218 486 302 15 24 495 11 468 2.64e-56 195
Msa0371620 MtrunA17_Chr6g0453941 48.168 191 96 2 162 351 75 263 1.46e-55 187
Msa0371620 MtrunA17_Chr8g0336261 57.971 138 57 1 321 458 1 137 1.51e-55 182
Msa0371620 MtrunA17_Chr5g0431441 29.959 484 291 15 24 493 18 467 2.37e-55 192
Msa0371620 MtrunA17_Chr8g0377941 28.834 489 293 15 25 492 8 462 1.08e-54 190
Msa0371620 MtrunA17_Chr5g0431401 29.278 485 280 16 24 491 10 448 2.27e-54 189
Msa0371620 MtrunA17_Chr6g0454281 48.677 189 92 2 21 204 7 195 1.00e-53 180
Msa0371620 MtrunA17_Chr5g0431361 29.046 482 288 15 24 491 12 453 1.14e-53 187
Msa0371620 MtrunA17_Chr7g0243931 30.255 509 283 17 22 491 15 490 1.27e-53 188
Msa0371620 MtrunA17_Chr1g0207931 36.437 247 146 3 241 480 244 486 1.77e-53 188
Msa0371620 MtrunA17_Chr7g0275681 30.078 512 293 15 16 494 4 483 2.35e-53 187
Msa0371620 MtrunA17_Chr5g0431371 29.876 482 281 15 24 491 10 448 2.68e-53 186
Msa0371620 MtrunA17_Chr7g0265041 29.365 504 306 12 23 496 10 493 1.03e-52 186
Msa0371620 MtrunA17_Chr8g0366391 29.703 505 311 16 17 497 2 486 2.39e-52 184
Msa0371620 MtrunA17_Chr8g0373301 29.736 417 248 9 90 487 72 462 6.60e-52 182
Msa0371620 MtrunA17_Chr7g0243681 29.102 512 287 17 18 491 6 479 9.35e-52 183
Msa0371620 MtrunA17_Chr7g0243951 28.571 504 297 14 22 491 9 483 1.24e-51 182
Msa0371620 MtrunA17_Chr8g0336741 29.835 486 280 17 20 479 9 459 6.97e-51 180
Msa0371620 MtrunA17_Chr5g0431421 28.747 487 282 15 24 492 10 449 8.23e-51 179
Msa0371620 MtrunA17_Chr4g0072771 26.105 475 312 11 21 489 22 463 1.02e-50 179
Msa0371620 MtrunA17_Chr5g0440421 29.240 513 299 19 21 493 7 495 1.29e-50 180
Msa0371620 MtrunA17_Chr7g0243631 29.980 507 283 19 24 491 13 486 4.86e-50 178
Msa0371620 MtrunA17_Chr6g0449931 30.556 504 276 17 22 491 4 467 2.22e-49 176
Msa0371620 MtrunA17_Chr6g0462571 31.868 364 206 10 139 487 121 457 2.40e-49 176
Msa0371620 MtrunA17_Chr7g0243771 30.178 507 278 18 24 491 6 475 3.05e-49 176
Msa0371620 MtrunA17_Chr7g0243801 29.341 501 298 15 20 491 3 476 3.51e-49 176
Msa0371620 MtrunA17_Chr7g0249961 35.417 240 136 5 262 493 33 261 4.71e-49 169
Msa0371620 MtrunA17_Chr8g0339631 29.508 427 242 12 77 480 67 457 5.99e-49 175
Msa0371620 MtrunA17_Chr7g0265141 28.544 522 288 18 18 492 3 486 1.09e-48 174
Msa0371620 MtrunA17_Chr7g0232411 27.856 499 288 17 24 490 6 464 1.17e-48 174
Msa0371620 MtrunA17_Chr1g0153451 28.543 501 293 17 24 495 6 470 1.60e-48 174
Msa0371620 MtrunA17_Chr7g0232391 28.770 504 277 20 24 490 6 464 1.78e-48 173
Msa0371620 MtrunA17_Chr7g0232401 26.489 487 292 14 24 480 6 456 2.01e-48 173
Msa0371620 MtrunA17_Chr7g0243861 28.125 512 306 16 14 491 4 487 2.33e-48 174
Msa0371620 MtrunA17_Chr8g0336691 28.715 498 280 18 24 487 919 1375 8.52e-48 177
Msa0371620 MtrunA17_Chr8g0336691 26.263 495 296 14 24 487 13 469 2.91e-47 176
Msa0371620 MtrunA17_Chr8g0336691 28.842 475 267 17 24 480 480 901 8.27e-44 166
Msa0371620 MtrunA17_Chr4g0060511 28.373 504 298 15 24 491 11 487 1.22e-47 172
Msa0371620 MtrunA17_Chr5g0419761 28.487 509 311 15 19 496 4 490 1.23e-47 172
Msa0371620 MtrunA17_Chr7g0232331 27.075 506 294 18 20 491 2 466 1.31e-47 171
Msa0371620 MtrunA17_Chr8g0374931 28.628 503 299 15 21 491 7 481 1.37e-47 171
Msa0371620 MtrunA17_Chr6g0462521 27.902 491 287 13 22 489 2 448 2.43e-47 170
Msa0371620 MtrunA17_Chr8g0336651 28.513 491 288 15 24 487 6 460 2.67e-47 176
Msa0371620 MtrunA17_Chr8g0336651 28.131 487 285 16 24 480 781 1232 6.65e-46 172
Msa0371620 MtrunA17_Chr8g0336651 31.783 258 136 5 238 487 545 770 7.25e-36 142
Msa0371620 MtrunA17_Chr4g0014061 29.600 500 282 18 25 491 10 472 2.68e-47 171
Msa0371620 MtrunA17_Chr6g0486251 26.789 489 297 14 25 487 7 460 3.21e-47 170
Msa0371620 MtrunA17_Chr6g0486201 26.789 489 297 14 25 487 7 460 3.21e-47 170
Msa0371620 MtrunA17_Chr6g0462531 28.163 490 283 15 22 480 2 453 5.80e-47 169
Msa0371620 MtrunA17_Chr4g0044501 28.800 500 305 17 24 497 10 484 7.44e-47 169
Msa0371620 MtrunA17_Chr8g0335161 27.490 502 303 17 20 495 2 468 1.26e-46 168
Msa0371620 MtrunA17_Chr4g0072761 25.690 471 310 11 24 489 15 450 1.65e-46 167
Msa0371620 MtrunA17_Chr7g0275511 29.328 491 288 15 23 487 14 471 1.68e-46 168
Msa0371620 MtrunA17_Chr8g0335141 28.773 497 296 18 20 491 5 468 2.28e-46 167
Msa0371620 MtrunA17_Chr6g0462541 28.947 494 281 14 25 487 5 459 2.69e-46 168
Msa0371620 MtrunA17_Chr5g0448551 26.292 445 292 10 21 459 4 418 2.92e-46 167
Msa0371620 MtrunA17_Chr7g0243871 28.261 506 295 15 18 491 3 472 3.19e-46 167
Msa0371620 MtrunA17_Chr8g0336731 28.776 490 286 16 26 488 34 487 3.28e-46 168
Msa0371620 MtrunA17_Chr5g0419771 27.146 501 312 13 24 493 36 514 4.18e-46 168
Msa0371620 MtrunA17_Chr6g0459311 27.218 496 294 17 21 487 10 467 9.31e-46 166
Msa0371620 MtrunA17_Chr7g0265101 28.628 503 319 14 18 495 3 490 9.42e-46 167
Msa0371620 MtrunA17_Chr7g0243781 27.184 515 292 16 18 491 3 475 1.05e-45 166
Msa0371620 MtrunA17_Chr5g0442561 27.219 507 303 16 21 494 2 475 1.99e-45 165
Msa0371620 MtrunA17_Chr1g0159551 27.176 471 283 14 29 480 19 448 2.42e-45 165
Msa0371620 MtrunA17_Chr7g0232341 27.505 509 288 19 20 491 2 466 2.59e-45 165
Msa0371620 MtrunA17_Chr3g0106231 27.495 491 278 15 24 492 18 452 3.19e-45 165
Msa0371620 MtrunA17_Chr2g0294921 29.459 499 291 16 25 491 161 630 3.41e-45 167
Msa0371620 MtrunA17_Chr6g0462551 27.236 492 299 15 22 487 2 460 7.27e-45 164
Msa0371620 MtrunA17_Chr2g0294931 28.112 498 307 13 21 491 8 481 8.18e-45 164
Msa0371620 MtrunA17_Chr8g0339451 29.710 414 232 11 91 480 74 452 9.12e-45 163
Msa0371620 MtrunA17_Chr1g0179901 27.362 508 303 19 24 493 16 495 2.83e-44 162
Msa0371620 MtrunA17_Chr8g0339461 31.398 379 213 12 130 484 109 464 2.90e-44 162
Msa0371620 MtrunA17_Chr5g0428081 27.049 488 311 12 27 491 14 479 8.32e-44 161
Msa0371620 MtrunA17_Chr7g0232311 32.143 308 174 6 200 488 169 460 1.10e-43 160
Msa0371620 MtrunA17_Chr8g0374971 28.429 503 289 15 25 491 13 480 1.29e-43 160
Msa0371620 MtrunA17_Chr4g0066221 28.600 493 298 14 27 491 14 480 1.37e-43 160
Msa0371620 MtrunA17_Chr5g0442581 26.953 512 308 16 21 497 2 482 1.47e-43 161
Msa0371620 MtrunA17_Chr5g0442601 27.326 516 301 17 18 494 398 878 1.86e-43 164
Msa0371620 MtrunA17_Chr5g0442601 35.556 180 95 3 264 432 164 333 2.72e-27 116
Msa0371620 MtrunA17_Chr8g0334851 27.345 501 284 17 22 484 4 462 2.84e-43 159
Msa0371620 MtrunA17_Chr8g0361371 28.008 507 283 19 21 488 4 467 3.11e-43 159
Msa0371620 MtrunA17_Chr1g0173121 25.451 499 289 14 25 491 15 462 4.51e-43 159
Msa0371620 MtrunA17_Chr5g0442541 28.740 508 283 20 21 492 2 466 4.82e-43 159
Msa0371620 MtrunA17_Chr8g0339601 32.394 284 157 7 219 479 47 318 6.82e-43 155
Msa0371620 MtrunA17_Chr5g0442521 27.308 509 291 17 21 488 2 472 9.02e-43 158
Msa0371620 MtrunA17_Chr8g0347281 28.364 483 283 16 23 480 17 461 1.02e-42 158
Msa0371620 MtrunA17_Chr4g0066281 27.088 491 293 14 27 491 15 466 1.32e-42 157
Msa0371620 MtrunA17_Chr7g0243761 27.572 486 292 14 24 491 11 454 1.38e-42 157
Msa0371620 MtrunA17_Chr7g0235051 30.040 506 262 23 18 490 6 452 1.41e-42 157
Msa0371620 MtrunA17_Chr8g0347271 27.463 477 295 12 23 480 18 462 1.84e-42 157
Msa0371620 MtrunA17_Chr7g0265151 25.838 507 327 15 19 496 2 488 2.01e-42 157
Msa0371620 MtrunA17_Chr3g0079731 26.693 502 301 15 25 489 7 478 2.44e-42 157
Msa0371620 MtrunA17_Chr8g0374941 28.685 502 285 20 27 491 952 1417 3.25e-42 161
Msa0371620 MtrunA17_Chr8g0374941 27.160 486 281 19 27 475 14 463 5.30e-36 142
Msa0371620 MtrunA17_Chr8g0374941 27.766 479 283 16 27 473 479 926 8.57e-36 142
Msa0371620 MtrunA17_Chr8g0374901 29.142 501 282 18 27 491 15 478 4.59e-42 156
Msa0371620 MtrunA17_Chr8g0334861 26.923 494 303 15 21 490 3 462 4.86e-42 156
Msa0371620 MtrunA17_Chr7g0265051 27.539 512 311 17 18 495 3 488 1.49e-41 155
Msa0371620 MtrunA17_Chr5g0448521 26.706 513 293 19 21 494 2 470 1.68e-41 154
Msa0371620 MtrunA17_Chr4g0066261 27.181 493 306 16 27 491 14 481 2.35e-41 154
Msa0371620 MtrunA17_Chr5g0442511 27.327 505 276 16 18 488 43 490 3.32e-41 154
Msa0371620 MtrunA17_Chr4g0011051 27.364 497 320 13 22 492 7 488 4.92e-41 154
Msa0371620 MtrunA17_Chr6g0454111 43.558 163 89 2 180 341 23 183 6.29e-41 145
Msa0371620 MtrunA17_Chr4g0066201 27.586 493 298 14 25 493 19 476 1.08e-40 152
Msa0371620 MtrunA17_Chr5g0401851 26.181 508 297 17 26 491 12 483 1.10e-40 152
Msa0371620 MtrunA17_Chr1g0153461 37.557 221 113 6 297 495 2 219 1.14e-40 145
Msa0371620 MtrunA17_Chr8g0350881 28.063 506 287 15 25 491 13 480 7.95e-40 150
Msa0371620 MtrunA17_Chr7g0218311 26.761 497 304 15 25 491 17 483 1.62e-39 149
Msa0371620 MtrunA17_Chr5g0410941 25.963 493 312 12 25 491 24 489 1.75e-39 149
Msa0371620 MtrunA17_Chr2g0329111 26.337 486 302 13 20 477 2 459 1.83e-39 149
Msa0371620 MtrunA17_Chr6g0463851 27.800 500 295 17 27 491 14 482 2.49e-39 149
Msa0371620 MtrunA17_Chr5g0416741 25.697 502 323 15 18 491 4 483 3.53e-39 148
Msa0371620 MtrunA17_Chr8g0334831 28.600 500 243 23 21 461 3 447 4.54e-39 148
Msa0371620 MtrunA17_Chr4g0044521 27.273 495 306 19 17 489 2 464 5.28e-39 147
Msa0371620 MtrunA17_Chr7g0265111 26.190 504 311 18 24 492 39 516 5.41e-39 149
Msa0371620 MtrunA17_Chr5g0442491 26.070 514 302 15 21 494 2 477 7.17e-39 147
Msa0371620 MtrunA17_Chr4g0066131 26.044 503 294 14 25 491 14 474 3.48e-38 145
Msa0371620 MtrunA17_Chr4g0066151 26.613 496 300 15 25 491 19 479 3.64e-38 145
Msa0371620 MtrunA17_Chr8g0339441 37.198 207 111 4 298 485 217 423 1.06e-37 143
Msa0371620 MtrunA17_Chr5g0432731 30.128 312 187 8 194 493 6 298 1.26e-37 140
Msa0371620 MtrunA17_Chr5g0420801 26.899 487 310 19 20 491 3 458 4.49e-37 142
Msa0371620 MtrunA17_Chr6g0463891 27.088 491 315 14 25 491 13 484 9.99e-37 141
Msa0371620 MtrunA17_Chr6g0463861 27.163 497 293 18 27 491 14 473 1.37e-36 141
Msa0371620 MtrunA17_Chr8g0370941 24.213 508 314 14 24 489 8 486 1.55e-36 141
Msa0371620 MtrunA17_Chr5g0403641 31.034 290 153 9 240 496 235 510 2.00e-36 141
Msa0371620 MtrunA17_Chr4g0044481 27.442 430 252 12 17 435 20 400 3.01e-36 139
Msa0371620 MtrunA17_Chr5g0429681 25.752 532 269 19 21 495 41 503 1.06e-35 139
Msa0371620 MtrunA17_Chr7g0243851 32.903 310 174 10 211 491 138 442 1.16e-35 138
Msa0371620 MtrunA17_Chr3g0118741 94.828 58 3 0 21 78 3 60 2.59e-35 126
Msa0371620 MtrunA17_Chr5g0416821 25.314 478 327 12 25 491 15 473 2.89e-35 137
Msa0371620 MtrunA17_Chr7g0241801 28.633 461 256 22 21 468 6 406 4.28e-35 136
Msa0371620 MtrunA17_Chr5g0429711 26.775 493 310 16 20 495 7 465 5.61e-35 136
Msa0371620 MtrunA17_Chr8g0355221 25.971 489 320 14 26 491 17 486 1.90e-34 135
Msa0371620 MtrunA17_Chr2g0294941 29.121 364 216 11 133 473 17 361 2.25e-34 133
Msa0371620 MtrunA17_Chr1g0165701 25.257 487 323 13 26 491 17 483 7.01e-34 134
Msa0371620 MtrunA17_Chr7g0243711 36.449 214 118 6 295 491 104 316 7.54e-34 130
Msa0371620 MtrunA17_Chr2g0302961 24.704 506 302 15 22 491 3 465 8.14e-34 133
Msa0371620 MtrunA17_Chr8g0361411 26.489 487 310 18 18 491 2 453 1.87e-33 132
Msa0371620 MtrunA17_Chr4g0042891 26.220 492 304 19 24 490 7 464 2.03e-33 132
Msa0371620 MtrunA17_Chr1g0196851 25.202 496 274 19 17 472 42 480 5.76e-33 131
Msa0371620 MtrunA17_Chr3g0106251 28.852 305 187 8 197 492 11 294 1.16e-32 127
Msa0371620 MtrunA17_Chr3g0079711 37.500 184 96 4 325 489 3 186 1.29e-32 123
Msa0371620 MtrunA17_Chr2g0307961 26.946 501 306 20 16 492 5 469 1.95e-32 129
Msa0371620 MtrunA17_Chr4g0066171 25.151 497 300 13 25 491 22 476 3.76e-32 128
Msa0371620 MtrunA17_Chr7g0241781 27.778 468 259 22 21 472 6 410 4.22e-32 127
Msa0371620 MtrunA17_Chr4g0042931 26.721 494 297 21 24 490 7 462 8.34e-32 127
Msa0371620 MtrunA17_Chr8g0369341 24.649 499 316 16 20 491 3 468 1.20e-31 127
Msa0371620 MtrunA17_Chr2g0302991 28.477 302 180 7 211 491 176 462 1.80e-31 126
Msa0371620 MtrunA17_Chr8g0336251 27.292 469 278 16 24 465 7 439 4.85e-31 125
Msa0371620 MtrunA17_Chr8g0336321 27.292 469 278 16 24 465 7 439 5.55e-31 125
Msa0371620 MtrunA17_Chr2g0278721 28.094 509 297 23 17 496 510 978 1.05e-29 123
Msa0371620 MtrunA17_Chr2g0278721 25.855 468 294 17 20 468 10 443 7.55e-28 118
Msa0371620 MtrunA17_Chr8g0367221 27.586 464 275 20 24 462 798 1225 1.23e-29 123
Msa0371620 MtrunA17_Chr8g0367221 28.153 444 248 21 24 442 12 409 2.07e-27 117
Msa0371620 MtrunA17_Chr8g0367221 25.647 464 294 21 24 467 1288 1720 1.72e-24 108
Msa0371620 MtrunA17_Chr7g0243911 33.040 227 114 7 271 480 4 209 1.40e-29 115
Msa0371620 MtrunA17_Chr1g0207881 42.149 121 64 1 366 480 253 373 1.68e-29 119
Msa0371620 MtrunA17_Chr1g0207881 25.589 297 167 11 24 307 8 263 5.76e-12 67.4
Msa0371620 MtrunA17_Chr4g0029131 23.992 471 294 15 24 472 12 440 2.27e-29 122
Msa0371620 MtrunA17_Chr8g0382021 32.161 199 119 4 298 480 279 477 5.49e-29 119
Msa0371620 MtrunA17_Chr4g0029151 23.644 461 308 12 24 472 20 448 5.92e-29 119
Msa0371620 MtrunA17_Chr6g0466831 25.301 498 312 18 17 495 11 467 8.29e-29 119
Msa0371620 MtrunA17_Chr7g0243611 34.513 226 124 8 238 444 76 296 8.99e-29 115
Msa0371620 MtrunA17_Chr7g0243811 25.352 426 250 13 36 438 1 381 2.01e-28 116
Msa0371620 MtrunA17_Chr6g0464091 27.252 433 267 18 17 434 10 409 4.39e-28 116
Msa0371620 MtrunA17_Chr2g0302851 26.004 473 287 17 17 468 9 439 1.61e-27 115
Msa0371620 MtrunA17_Chr6g0466841 25.553 497 312 19 17 495 11 467 3.66e-27 114
Msa0371620 MtrunA17_Chr5g0427561 54.762 84 38 0 409 492 2 85 8.24e-26 100
Msa0371620 MtrunA17_Chr7g0232351 27.644 416 228 18 24 409 6 378 8.86e-26 108
Msa0371620 MtrunA17_Chr2g0278741 26.526 475 288 18 17 468 89 525 3.16e-25 108
Msa0371620 MtrunA17_Chr8g0337381 45.455 121 60 2 371 487 3 121 5.14e-25 100
Msa0371620 MtrunA17_Chr4g0069611 24.736 473 279 16 24 468 15 438 6.88e-25 107
Msa0371620 MtrunA17_Chr6g0482061 24.324 481 315 13 24 479 11 467 1.90e-24 106
Msa0371620 MtrunA17_Chr4g0040691 23.636 495 308 19 24 492 8 458 1.68e-23 103
Msa0371620 MtrunA17_Chr5g0409591 28.455 246 145 8 240 458 212 453 1.74e-23 103
Msa0371620 MtrunA17_Chr5g0431431 30.078 256 155 7 194 447 110 343 2.44e-23 101
Msa0371620 MtrunA17_Chr6g0454381 33.571 140 93 0 142 281 3 142 4.26e-23 95.1
Msa0371620 MtrunA17_Chr6g0454391 64.062 64 23 0 384 447 11 74 8.58e-23 93.6
Msa0371620 MtrunA17_Chr2g0283041 24.893 466 290 20 24 468 7 433 2.35e-22 99.8
Msa0371620 MtrunA17_Chr5g0427571 29.870 231 150 6 238 460 42 268 1.47e-21 95.1
Msa0371620 MtrunA17_Chr8g0357361 30.049 203 132 5 234 434 57 251 1.74e-21 94.4
Msa0371620 MtrunA17_Chr3g0092031 31.953 169 105 4 301 463 6 170 2.86e-21 92.0
Msa0371620 MtrunA17_Chr4g0040711 24.408 422 274 14 24 434 8 395 2.09e-20 94.0
Msa0371620 MtrunA17_Chr7g0250021 25.648 347 212 11 24 361 12 321 2.31e-20 92.0
Msa0371620 MtrunA17_Chr7g0231631 28.346 254 173 6 242 491 11 259 2.70e-20 90.9
Msa0371620 MtrunA17_Chr4g0066141 35.669 157 84 4 352 491 195 351 8.77e-20 90.9
Msa0371620 MtrunA17_Chr4g0039881 29.787 235 145 7 242 468 193 415 8.18e-19 89.0
Msa0371620 MtrunA17_Chr2g0319791 24.731 465 295 21 14 462 4 429 1.30e-18 88.2
Msa0371620 MtrunA17_Chr2g0319801 23.195 457 298 13 24 462 8 429 1.76e-18 87.8
Msa0371620 MtrunA17_Chr2g0319731 23.504 468 283 16 24 462 25 446 2.79e-18 87.4
Msa0371620 MtrunA17_Chr4g0029161 21.489 470 279 15 24 472 12 412 1.38e-17 85.1
Msa0371620 MtrunA17_Chr2g0319751 23.506 502 304 21 24 494 485 937 4.16e-17 84.7
Msa0371620 MtrunA17_Chr2g0319751 23.553 501 279 22 24 493 8 435 2.09e-15 79.3
Msa0371620 MtrunA17_Chr2g0319761 28.986 207 137 5 295 492 253 458 7.32e-17 82.8
Msa0371620 MtrunA17_Chr7g0243731 47.059 68 35 1 368 434 6 73 7.94e-15 69.7
Msa0371620 MtrunA17_Chr1g0207911 25.498 251 166 7 25 269 9 244 1.29e-13 70.9
Msa0371620 MtrunA17_Chr7g0267931 67.568 37 11 1 29 64 25 61 1.54e-11 59.7
Msa0371620 MtrunA17_Chr2g0321331 29.012 162 90 5 309 462 94 238 1.67e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0371620 AT1G22380.1 51.471 476 229 2 18 492 7 481 0.0 537
Msa0371620 AT1G22360.1 49.789 474 236 2 20 492 6 478 0.0 523
Msa0371620 AT1G22400.1 49.580 476 237 3 19 492 8 482 0.0 517
Msa0371620 AT1G22340.1 48.326 478 246 1 19 495 8 485 0.0 517
Msa0371620 AT1G22370.2 50.420 476 229 3 18 492 7 476 1.02e-178 510
Msa0371620 AT1G22360.2 48.312 474 231 3 20 492 6 466 4.99e-175 501
Msa0371620 AT1G78270.1 46.266 482 255 4 18 497 7 486 7.37e-162 468
Msa0371620 AT1G22370.1 49.342 304 152 2 190 492 4 306 3.10e-102 309
Msa0371620 AT3G46660.1 37.317 477 256 13 25 491 15 458 7.84e-86 272
Msa0371620 AT5G59590.1 34.737 475 274 11 21 491 7 449 2.43e-84 268
Msa0371620 AT3G11340.1 34.382 477 277 9 18 492 3 445 3.84e-84 267
Msa0371620 AT3G46690.1 36.765 476 264 11 21 491 6 449 3.93e-84 267
Msa0371620 AT2G36970.1 31.967 488 297 9 18 491 4 470 5.29e-84 268
Msa0371620 AT5G59580.1 35.084 476 276 10 22 495 7 451 1.40e-83 266
Msa0371620 AT3G46650.1 35.714 476 249 11 22 493 8 430 1.48e-83 265
Msa0371620 AT5G38010.1 34.656 479 277 9 19 491 5 453 4.92e-83 265
Msa0371620 AT3G46670.1 35.010 477 266 13 24 494 9 447 5.46e-83 264
Msa0371620 AT5G38040.1 35.054 465 264 11 32 491 18 449 2.95e-82 262
Msa0371620 AT3G46680.1 35.307 473 269 12 21 488 6 446 4.28e-82 262
Msa0371620 AT3G21560.1 31.746 504 291 14 8 491 2 472 4.11e-78 253
Msa0371620 AT5G05880.1 32.272 471 280 11 24 488 8 445 1.19e-77 250
Msa0371620 AT3G46700.1 34.038 473 276 10 21 491 6 444 3.22e-76 246
Msa0371620 AT5G05890.1 32.842 475 276 11 24 488 8 449 6.12e-75 243
Msa0371620 AT4G15500.1 31.622 487 291 12 20 492 5 463 6.19e-74 241
Msa0371620 AT3G46720.1 33.194 479 272 11 19 491 4 440 7.58e-73 238
Msa0371620 AT5G05900.1 30.947 475 280 11 24 488 8 444 4.20e-72 236
Msa0371620 AT4G15480.1 31.526 498 293 15 12 491 11 478 7.08e-72 236
Msa0371620 AT2G28080.1 32.278 474 289 10 28 492 22 472 1.13e-71 236
Msa0371620 AT5G05870.1 31.513 476 289 11 24 491 8 454 1.95e-71 234
Msa0371620 AT4G15490.1 32.258 496 281 14 20 492 4 467 1.76e-70 233
Msa0371620 AT3G55710.1 31.568 491 279 16 24 496 8 459 3.09e-69 229
Msa0371620 AT2G26480.1 31.789 475 288 11 21 492 5 446 2.26e-68 226
Msa0371620 AT5G05860.1 32.278 474 282 10 24 492 9 448 4.94e-68 225
Msa0371620 AT3G55700.1 29.814 483 294 12 24 496 8 455 3.03e-67 223
Msa0371620 AT2G31750.1 30.021 483 295 14 22 493 6 456 1.22e-63 214
Msa0371620 AT2G31750.2 30.021 483 295 14 22 493 6 456 2.81e-63 214
Msa0371620 AT1G05680.1 30.753 465 285 11 24 480 6 441 4.88e-62 209
Msa0371620 AT3G02100.1 30.000 490 291 15 17 489 6 460 9.84e-62 209
Msa0371620 AT1G05675.1 28.964 473 299 11 24 488 6 449 5.91e-61 207
Msa0371620 AT2G43820.1 28.838 482 293 13 21 491 4 446 1.12e-60 206
Msa0371620 AT2G31790.1 30.169 474 290 12 18 480 2 445 1.47e-59 203
Msa0371620 AT2G43840.1 27.593 482 297 13 22 491 5 446 9.61e-58 198
Msa0371620 AT2G43840.2 27.593 482 297 13 22 491 5 446 1.10e-57 198
Msa0371620 AT2G30140.2 30.339 501 276 17 15 495 7 454 3.85e-57 197
Msa0371620 AT2G30140.1 30.140 501 278 17 15 495 7 455 5.91e-57 196
Msa0371620 AT2G36750.1 31.515 495 295 13 24 493 10 485 4.06e-55 192
Msa0371620 AT5G17050.1 25.826 484 324 11 16 493 4 458 1.58e-54 190
Msa0371620 AT1G05560.1 27.347 490 305 13 23 497 4 457 4.31e-54 189
Msa0371620 AT1G05560.2 27.347 490 305 13 23 497 54 507 1.08e-53 189
Msa0371620 AT2G36800.1 30.357 504 305 17 17 493 5 489 1.72e-53 188
Msa0371620 AT4G34131.1 29.783 507 286 15 21 491 7 479 2.17e-53 187
Msa0371620 AT1G24100.1 29.006 493 284 17 22 491 9 458 7.62e-53 185
Msa0371620 AT2G15480.1 28.831 496 308 11 20 491 6 480 9.70e-53 186
Msa0371620 AT4G15550.1 27.621 496 296 14 23 490 12 472 1.18e-52 185
Msa0371620 AT1G05530.1 26.775 493 299 14 22 492 3 455 4.41e-52 183
Msa0371620 AT2G15490.3 28.571 497 310 11 19 491 2 477 5.32e-52 184
Msa0371620 AT4G01070.1 28.200 500 273 14 20 480 4 456 6.21e-52 183
Msa0371620 AT2G30150.2 29.019 479 290 13 24 491 13 452 6.53e-52 182
Msa0371620 AT4G14090.1 30.081 492 283 18 17 490 6 454 1.78e-51 181
Msa0371620 AT2G36770.1 29.307 505 312 14 17 494 5 491 3.08e-51 182
Msa0371620 AT2G15480.2 28.458 506 307 12 20 491 6 490 4.71e-51 181
Msa0371620 AT2G15490.1 28.400 500 310 12 19 491 2 480 6.74e-51 181
Msa0371620 AT5G17040.1 26.042 480 300 11 24 492 5 440 1.15e-50 179
Msa0371620 AT2G36780.1 30.200 500 296 16 24 493 14 490 1.32e-50 180
Msa0371620 AT1G30530.1 25.873 487 319 12 10 492 3 451 2.91e-50 178
Msa0371620 AT2G30150.1 28.842 475 288 13 28 491 1 436 5.59e-50 177
Msa0371620 AT3G53160.1 28.831 496 312 14 24 495 8 486 1.17e-49 177
Msa0371620 AT2G23250.1 28.512 477 287 18 27 491 1 435 1.60e-49 176
Msa0371620 AT5G26310.1 28.794 514 275 20 19 490 2 466 2.41e-49 176
Msa0371620 AT5G66690.1 27.811 507 289 17 19 490 2 466 1.26e-48 174
Msa0371620 AT5G37950.1 33.158 380 208 11 39 409 1 343 2.39e-48 170
Msa0371620 AT5G17040.2 31.270 307 194 4 188 492 47 338 4.45e-48 169
Msa0371620 AT2G23260.1 26.230 488 310 16 17 491 3 453 7.86e-48 172
Msa0371620 AT5G37950.2 32.620 374 212 9 39 409 1 337 1.23e-47 168
Msa0371620 AT2G36760.1 28.800 500 305 16 24 494 14 491 1.48e-47 172
Msa0371620 AT4G34135.1 28.711 512 294 13 17 491 4 481 2.16e-47 171
Msa0371620 AT2G36790.1 30.629 493 303 14 24 493 13 489 1.87e-46 169
Msa0371620 AT1G10400.1 30.400 500 284 21 21 494 4 465 7.10e-46 167
Msa0371620 AT3G22250.1 27.660 470 283 15 20 464 4 441 9.15e-46 166
Msa0371620 AT4G36770.1 28.482 481 280 17 24 476 4 448 7.50e-45 164
Msa0371620 AT1G01420.1 27.824 478 278 15 23 471 7 446 1.71e-44 163
Msa0371620 AT1G01420.2 27.824 478 278 15 23 471 10 449 2.11e-44 163
Msa0371620 AT5G17030.1 28.477 302 201 3 193 493 170 457 1.60e-43 160
Msa0371620 AT4G34138.1 26.627 507 298 13 22 491 9 478 3.00e-43 160
Msa0371620 AT2G16890.2 28.543 508 274 23 24 491 9 467 4.20e-43 159
Msa0371620 AT1G01390.1 29.352 494 295 14 18 488 2 464 1.03e-42 158
Msa0371620 AT1G01390.2 29.592 490 291 14 18 484 19 477 1.28e-42 158
Msa0371620 AT3G50740.1 27.500 520 280 19 22 493 5 475 4.21e-42 157
Msa0371620 AT5G14860.1 27.273 506 300 17 20 491 4 475 4.71e-42 157
Msa0371620 AT3G53150.1 25.869 518 322 12 18 494 16 512 5.21e-42 157
Msa0371620 AT2G29710.1 25.873 487 321 15 21 492 2 463 5.00e-41 153
Msa0371620 AT2G18570.1 26.471 510 285 18 22 489 3 464 6.52e-40 150
Msa0371620 AT3G16520.3 32.087 321 191 10 180 489 153 457 1.24e-39 149
Msa0371620 AT5G03490.1 28.846 520 276 23 7 491 2 462 7.11e-39 147
Msa0371620 AT2G29730.1 24.017 483 329 14 24 492 5 463 8.01e-38 144
Msa0371620 AT3G16520.2 32.459 305 179 10 180 473 153 441 1.45e-37 143
Msa0371620 AT3G16520.1 32.268 313 183 10 180 477 153 451 1.76e-37 143
Msa0371620 AT1G51210.1 27.729 458 277 13 20 465 16 431 4.24e-36 139
Msa0371620 AT3G21790.1 26.535 505 308 17 22 491 2 478 4.31e-36 140
Msa0371620 AT2G18560.1 30.263 304 161 10 219 489 89 374 2.36e-35 136
Msa0371620 AT1G73880.1 25.866 491 319 14 17 492 7 467 7.17e-35 136
Msa0371620 AT5G65550.1 26.882 465 292 16 22 469 7 440 3.04e-34 134
Msa0371620 AT3G21780.1 26.087 506 309 19 22 496 2 473 4.89e-34 134
Msa0371620 AT1G07250.1 25.391 512 309 18 21 496 3 477 4.35e-33 131
Msa0371620 AT1G07240.1 29.889 271 162 7 238 492 218 476 1.03e-32 130
Msa0371620 AT3G21800.1 32.028 281 155 8 240 496 212 480 1.25e-32 130
Msa0371620 AT3G21760.1 24.554 505 320 16 22 491 2 480 1.68e-32 130
Msa0371620 AT3G21750.1 23.031 508 318 14 22 494 2 471 2.03e-32 129
Msa0371620 AT4G15260.1 28.179 291 176 5 227 496 81 359 3.41e-32 127
Msa0371620 AT2G16890.3 26.957 460 248 22 24 444 9 419 6.90e-32 127
Msa0371620 AT5G49690.1 27.273 462 270 21 24 463 10 427 7.26e-32 127
Msa0371620 AT2G29740.1 30.469 256 153 7 238 481 222 464 1.32e-31 127
Msa0371620 AT5G12890.1 27.033 492 293 20 24 480 10 470 2.84e-31 126
Msa0371620 AT1G07260.1 29.104 268 165 6 238 492 217 472 3.16e-31 126
Msa0371620 AT4G15280.1 23.938 518 306 16 22 494 2 476 3.67e-31 126
Msa0371620 AT4G15280.2 23.709 523 311 16 17 494 29 508 4.89e-31 126
Msa0371620 AT2G29750.1 24.514 514 306 18 24 497 8 479 1.32e-30 124
Msa0371620 AT5G54010.1 25.000 496 299 21 22 494 4 449 2.40e-27 114
Msa0371620 AT4G27560.1 23.732 493 304 17 22 492 5 447 9.61e-26 110
Msa0371620 AT4G27570.1 23.820 466 290 15 22 468 5 424 2.04e-25 109
Msa0371620 AT2G22590.1 26.050 476 290 18 17 467 8 446 2.91e-25 108
Msa0371620 AT5G53990.1 25.858 437 252 16 21 442 3 382 4.42e-24 105
Msa0371620 AT1G64910.1 25.647 464 269 18 21 462 3 412 6.67e-24 104
Msa0371620 AT3G29630.1 25.000 428 271 15 22 444 4 386 4.41e-23 102
Msa0371620 AT4G34135.2 27.042 355 201 10 17 345 4 326 3.52e-22 97.8
Msa0371620 AT5G54060.1 24.211 475 310 14 17 473 6 448 1.15e-21 98.2
Msa0371620 AT1G64920.1 23.577 492 309 20 20 490 2 447 4.47e-21 96.3
Msa0371620 AT3G29630.2 24.122 427 250 13 22 444 4 360 4.53e-21 95.9
Msa0371620 AT1G06000.1 25.899 278 185 8 227 491 164 433 5.09e-20 92.8
Msa0371620 AT4G09500.2 22.845 464 292 17 22 468 4 418 7.77e-20 92.4
Msa0371620 AT2G22930.1 22.198 464 291 17 24 468 6 418 1.23e-18 88.6
Msa0371620 AT1G50580.1 24.186 430 267 15 22 442 4 383 5.83e-18 86.7
Msa0371620 AT4G09500.1 27.429 175 120 3 301 468 219 393 2.23e-17 84.7
Msa0371620 AT4G01070.2 22.917 384 215 12 19 368 3 339 4.04e-16 80.1

Find 109 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 3_1:-69854450 Msa0371620:CDS
TTATGCAACACTTGGAAAAT+AGG 0.224625 3_1:-69854073 Msa0371620:CDS
CATGTTGACTATTCTGAATT+TGG 0.236044 3_1:-69853759 Msa0371620:three_prime_UTR
TCTTCACCCATTACTATATC+TGG 0.244649 3_1:+69854307 None:intergenic
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_1:+69856991 None:intergenic
TGGAAGAGTGGCTAAGGATT+TGG 0.280456 3_1:-69856830 Msa0371620:CDS
GATTGCTCATTTGATTGATT+TGG 0.290032 3_1:-69853590 Msa0371620:three_prime_UTR
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_1:-69857054 Msa0371620:CDS
ATGACTCAGAATGCATAAAA+TGG 0.312996 3_1:-69854462 Msa0371620:CDS
GAAATGTAATAGATTTGTTT+TGG 0.317995 3_1:-69853568 Msa0371620:three_prime_UTR
CAGGTCTGCCTACTATTTGT+TGG 0.330319 3_1:-69854132 Msa0371620:CDS
CTAATACAATATGAGGCTTT+TGG 0.332718 3_1:+69857199 None:intergenic
ACCATTACAACGTAGGAGTT+TGG 0.334079 3_1:+69857131 None:intergenic
ACACTTGAAGCAATTTCTTC+AGG 0.336883 3_1:-69854151 Msa0371620:CDS
GGGCCAATGCTATATATGTT+AGG 0.338040 3_1:+69854559 None:intergenic
TATCTTTGATTATGTTCCTT+TGG 0.343696 3_1:-69853612 Msa0371620:three_prime_UTR
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_1:-69857055 Msa0371620:CDS
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_1:-69854099 Msa0371620:CDS
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_1:-69853998 Msa0371620:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_1:-69856850 Msa0371620:CDS
TCAGTACTATATATTAATTA+TGG 0.370543 3_1:-69854418 Msa0371620:CDS
GGAAGAGTGGCTAAGGATTT+GGG 0.372307 3_1:-69856829 Msa0371620:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_1:+69856871 None:intergenic
GCTTCTACTTGTGGGTTTGT+TGG 0.373328 3_1:-69856781 Msa0371620:CDS
AACACATTTGAAGAATTAGA+AGG 0.379838 3_1:-69854613 Msa0371620:CDS
TTTGGACTGCTTCTACTTGT+GGG 0.381446 3_1:-69856789 Msa0371620:CDS
ATCACTTGAAAGAATTTGCT+TGG 0.385257 3_1:-69854372 Msa0371620:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.386462 3_1:+69857027 None:intergenic
TATTTGAGTTATATTATAAT+CGG 0.388927 3_1:-69853855 Msa0371620:exon
CTTTGGACTGCTTCTACTTG+TGG 0.394771 3_1:-69856790 Msa0371620:CDS
TCACTTGAAAGAATTTGCTT+GGG 0.404835 3_1:-69854371 Msa0371620:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 3_1:-69854768 Msa0371620:CDS
GTGAATCCCTTGACACCCTT+AGG 0.405921 3_1:-69854591 Msa0371620:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 3_1:-69854760 Msa0371620:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 3_1:+69854176 None:intergenic
CGGTTTAATTTACCTTTGAA+TGG 0.412883 3_1:+69856718 None:intergenic
CATAAAATGGTTGAGTAAAT+GGG 0.417737 3_1:-69854449 Msa0371620:CDS
GCAAAACCGTATTCTTTCTC+AGG 0.431385 3_1:+69854511 None:intergenic
CAATGTTGTGTGATTCAACT+AGG 0.436379 3_1:-69856957 Msa0371620:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 3_1:-69854045 Msa0371620:CDS
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_1:+69857003 None:intergenic
AATGGTACTAATACAATATG+AGG 0.444708 3_1:+69857192 None:intergenic
GCCAAACTCCTACGTTGTAA+TGG 0.460605 3_1:-69857132 Msa0371620:CDS
CTAGATGAAGTCAAGGATAG+AGG 0.462415 3_1:-69854259 Msa0371620:CDS
CAACACTTGGAAAATAGGAT+TGG 0.465930 3_1:-69854068 Msa0371620:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_1:-69854044 Msa0371620:CDS
GGCCAATGCTATATATGTTA+GGG 0.467636 3_1:+69854560 None:intergenic
ATGAGGCCAGATATAGTAAT+GGG 0.468666 3_1:-69854313 Msa0371620:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_1:+69854109 None:intergenic
CTTGCTCATCCATCAGTTGG+AGG 0.473224 3_1:-69854202 Msa0371620:CDS
AAACGTTTGATAAAGTCTCT+TGG 0.482925 3_1:-69857072 Msa0371620:CDS
AAGAAAGGCCAACAAATAGT+AGG 0.487158 3_1:+69854124 None:intergenic
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_1:+69857174 None:intergenic
GAGACTTTATCAAACGTTTG+TGG 0.490628 3_1:+69857076 None:intergenic
GTCAACATGACATTGATTGA+TGG 0.501093 3_1:+69853773 None:intergenic
TGAATCCCTTGACACCCTTA+GGG 0.501956 3_1:-69854590 Msa0371620:CDS
ATACAAGTAACTGGAATATG+AGG 0.502466 3_1:+69856880 None:intergenic
AGAACTTGTGATGGAAATGA+TGG 0.507214 3_1:-69854011 Msa0371620:CDS
AACCCTAACATATATAGCAT+TGG 0.514549 3_1:-69854562 Msa0371620:CDS
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_1:+69854209 None:intergenic
CCAATCTAAACTTGTATCCA+AGG 0.516376 3_1:+69854768 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_1:+69857147 None:intergenic
ATTGGCCCACTTCACATGCT+TGG 0.521488 3_1:-69854544 Msa0371620:CDS
TCAGTGACTCTGATGAAGCT+TGG 0.522849 3_1:+69854709 None:intergenic
CTAGTTGAATCACACAACAT+TGG 0.524951 3_1:+69856958 None:intergenic
TGGCTATGACTATTAGGAGG+TGG 0.526998 3_1:+69857219 None:intergenic
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_1:-69856730 Msa0371620:intron
ACAAAATTGTGTGAGATCAT+CGG 0.529236 3_1:-69854647 Msa0371620:CDS
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_1:+69857168 None:intergenic
TGTTGGATATTTGCAATTCG+AGG 0.531454 3_1:-69856764 Msa0371620:CDS
TGACTCTGATGAAGCTTGGA+AGG 0.534999 3_1:+69854713 None:intergenic
CTTTGCTGGAAGAGTGGCTA+AGG 0.536699 3_1:-69856836 Msa0371620:CDS
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_1:-69856748 Msa0371620:CDS
AGAGATAACAGAACTTGTGA+TGG 0.539853 3_1:-69854020 Msa0371620:CDS
GGTTCCTAACTCATTGTGGT+TGG 0.541326 3_1:-69854180 Msa0371620:CDS
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_1:+69857008 None:intergenic
GCCTACCAAGCATGTGAAGT+GGG 0.545551 3_1:+69854539 None:intergenic
AGCTACAGATGCTACTAATG+TGG 0.548442 3_1:-69853936 Msa0371620:CDS
CACTTGAAAGAATTTGCTTG+GGG 0.550965 3_1:-69854370 Msa0371620:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.553399 3_1:-69854205 Msa0371620:CDS
TTTAGCCCTAAGGGTGTCAA+GGG 0.554175 3_1:+69854585 None:intergenic
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_1:-69856868 Msa0371620:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_1:+69857148 None:intergenic
TTGCTCATCCATCAGTTGGA+GGG 0.557925 3_1:-69854201 Msa0371620:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 3_1:-69854081 Msa0371620:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 3_1:+69854193 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 3_1:-69854184 Msa0371620:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_1:-69856842 Msa0371620:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_1:-69857018 Msa0371620:CDS
CTATGACTATTAGGAGGTGG+AGG 0.571491 3_1:+69857222 None:intergenic
TATTGTGGTTCTTGTTGACA+AGG 0.574072 3_1:-69853661 Msa0371620:three_prime_UTR
GCATTCGAGAGATACAACTT+TGG 0.576126 3_1:-69856807 Msa0371620:CDS
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 3_1:+69854777 None:intergenic
GCTACAGATGCTACTAATGT+GGG 0.582080 3_1:-69853935 Msa0371620:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 3_1:-69854314 Msa0371620:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 3_1:-69854540 Msa0371620:CDS
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_1:+69856919 None:intergenic
TGAGACAAAACTGCTTAGAG+TGG 0.594949 3_1:-69853967 Msa0371620:CDS
TTAATATATAGTACTGAGCA+AGG 0.597770 3_1:+69854424 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_1:-69854243 Msa0371620:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.610099 3_1:+69854538 None:intergenic
GTATGGACAGGAAAATATTG+TGG 0.616787 3_1:-69853676 Msa0371620:three_prime_UTR
ACTTCATCTAGAAAATCTTG+TGG 0.630695 3_1:+69854271 None:intergenic
TTAGTACCATTTCCAGCACA+AGG 0.640576 3_1:-69857180 Msa0371620:CDS
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_1:+69853596 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.648111 3_1:-69854007 Msa0371620:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_1:+69857098 None:intergenic
TGTGAAAACCATTACAACGT+AGG 0.688392 3_1:+69857124 None:intergenic
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_1:-69853932 Msa0371620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATAACTAAATTATTTCT+TGG + chr3_1:69854482-69854501 None:intergenic 10.0%
!! TAAATAATTAAGGATATTAT+AGG + chr3_1:69855227-69855246 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG + chr3_1:69855619-69855638 None:intergenic 10.0%
!! ATTAAAATCAATATAAACAA+AGG + chr3_1:69855795-69855814 None:intergenic 10.0%
!!! TATTTGAGTTATATTATAAT+CGG - chr3_1:69856952-69856971 Msa0371620:CDS 10.0%
!! TATTTAATGTATCTAAATAG+TGG + chr3_1:69854236-69854255 None:intergenic 15.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG - chr3_1:69854422-69854441 Msa0371620:CDS 15.0%
!! TTATACATTCATAATATTCA+TGG - chr3_1:69854669-69854688 Msa0371620:CDS 15.0%
!! TTAATGTGATATGAATATTT+AGG - chr3_1:69855586-69855605 Msa0371620:intron 15.0%
!! TCAGTACTATATATTAATTA+TGG - chr3_1:69856389-69856408 Msa0371620:intron 15.0%
!! GAAAATTATGAAGAAAAAAA+AGG + chr3_1:69857107-69857126 None:intergenic 15.0%
!!! TTATTTCTTGGAATATACTT+AGG + chr3_1:69854470-69854489 None:intergenic 20.0%
!! TCAAAATGTGACAATTATAA+AGG + chr3_1:69855140-69855159 None:intergenic 20.0%
!!! ATAGTAAGTTACCATTTTTA+TGG - chr3_1:69856468-69856487 Msa0371620:intron 20.0%
!! AAATTAACTATGATGTGAAA+AGG - chr3_1:69856762-69856781 Msa0371620:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG - chr3_1:69856763-69856782 Msa0371620:CDS 20.0%
!!! GAAATGTAATAGATTTGTTT+TGG - chr3_1:69857239-69857258 Msa0371620:CDS 20.0%
! AATGGTACTAATACAATATG+AGG + chr3_1:69853618-69853637 None:intergenic 25.0%
! TGAAACATAGAGAAAAAGAT+CGG + chr3_1:69854112-69854131 None:intergenic 25.0%
!! TAGATTTTACAAAACTACGA+TGG + chr3_1:69854142-69854161 None:intergenic 25.0%
! ATTTGACGCATTTAATACAA+GGG + chr3_1:69854731-69854750 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG + chr3_1:69854732-69854751 None:intergenic 25.0%
!! TTAAATGCGTCAAATTTTGA+CGG - chr3_1:69854736-69854755 Msa0371620:CDS 25.0%
!! TTTAGAATTAGAGTTAGTCA+AGG + chr3_1:69855034-69855053 None:intergenic 25.0%
!!! TTAGTTTAGCTACTTTTCTT+GGG + chr3_1:69855057-69855076 None:intergenic 25.0%
!!! ATTAGTTTAGCTACTTTTCT+TGG + chr3_1:69855058-69855077 None:intergenic 25.0%
! TCTCTGCAATAAATTACTAA+GGG - chr3_1:69855270-69855289 Msa0371620:intron 25.0%
! TGAAAAAGTGACAGTTATAA+AGG - chr3_1:69855366-69855385 Msa0371620:intron 25.0%
!!! ACTATTTTTAGAGCTTGATA+TGG - chr3_1:69855671-69855690 Msa0371620:intron 25.0%
! AAATGTACATCACAGAAATT+AGG + chr3_1:69855741-69855760 None:intergenic 25.0%
! AACACATTTGAAGAATTAGA+AGG - chr3_1:69856194-69856213 Msa0371620:intron 25.0%
! CATAAAATGGTTGAGTAAAT+GGG - chr3_1:69856358-69856377 Msa0371620:intron 25.0%
!! TTAATATATAGTACTGAGCA+AGG + chr3_1:69856386-69856405 None:intergenic 25.0%
!!! TACCATTTTTATGGATAATG+AGG - chr3_1:69856477-69856496 Msa0371620:intron 25.0%
!! CTTCATAATTTTCAACTGTA+TGG - chr3_1:69857114-69857133 Msa0371620:CDS 25.0%
! TATCTTTGATTATGTTCCTT+TGG - chr3_1:69857195-69857214 Msa0371620:CDS 25.0%
! CTAATACAATATGAGGCTTT+TGG + chr3_1:69853611-69853630 None:intergenic 30.0%
AAACGTTTGATAAAGTCTCT+TGG - chr3_1:69853735-69853754 Msa0371620:three_prime_UTR 30.0%
ATGGTCTCAAATTGAAAATC+AGG + chr3_1:69853783-69853802 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG + chr3_1:69853930-69853949 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG + chr3_1:69853939-69853958 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG - chr3_1:69853939-69853958 Msa0371620:CDS 30.0%
! CGGTTTAATTTACCTTTGAA+TGG + chr3_1:69854092-69854111 None:intergenic 30.0%
TATGAATCTAACGTACAGAT+CGG + chr3_1:69854332-69854351 None:intergenic 30.0%
TTAGTAGTGAGCCAATAAAT+GGG - chr3_1:69854576-69854595 Msa0371620:CDS 30.0%
!! CTACTTGTTGACTCATTTAT+TGG + chr3_1:69854619-69854638 None:intergenic 30.0%
AGTCAACAAGTAGTTCAAAT+CGG - chr3_1:69854626-69854645 Msa0371620:CDS 30.0%
CATTAATGGCCATGATTTAA+TGG + chr3_1:69854911-69854930 None:intergenic 30.0%
!! AAATACTTTGGTGCCATTAA+TGG + chr3_1:69854997-69855016 None:intergenic 30.0%
GACAATTATAAAGGAACAGA+GGG + chr3_1:69855131-69855150 None:intergenic 30.0%
TGACAATTATAAAGGAACAG+AGG + chr3_1:69855132-69855151 None:intergenic 30.0%
GTGAAATACATTTAGTGTCT+TGG + chr3_1:69855176-69855195 None:intergenic 30.0%
CTCTCTGCAATAAATTACTA+AGG - chr3_1:69855269-69855288 Msa0371620:intron 30.0%
!! TAAATTACTAAGGGCGTTAT+AGG - chr3_1:69855279-69855298 Msa0371620:intron 30.0%
AAGTGACAGTTATAAAGGAA+CGG - chr3_1:69855371-69855390 Msa0371620:intron 30.0%
TTAACGATTAGAATATGCCT+CGG + chr3_1:69855435-69855454 None:intergenic 30.0%
ACAAAATTGTGTGAGATCAT+CGG - chr3_1:69856160-69856179 Msa0371620:intron 30.0%
AACCCTAACATATATAGCAT+TGG - chr3_1:69856245-69856264 Msa0371620:intron 30.0%
! CATTTTCCTGAGAAAGAATA+CGG - chr3_1:69856290-69856309 Msa0371620:intron 30.0%
ATGACTCAGAATGCATAAAA+TGG - chr3_1:69856345-69856364 Msa0371620:intron 30.0%
GCATAAAATGGTTGAGTAAA+TGG - chr3_1:69856357-69856376 Msa0371620:intron 30.0%
! ATCACTTGAAAGAATTTGCT+TGG - chr3_1:69856435-69856454 Msa0371620:intron 30.0%
! TCACTTGAAAGAATTTGCTT+GGG - chr3_1:69856436-69856455 Msa0371620:intron 30.0%
ACTTCATCTAGAAAATCTTG+TGG + chr3_1:69856539-69856558 None:intergenic 30.0%
! AGATTTTCTAGATGAAGTCA+AGG - chr3_1:69856541-69856560 Msa0371620:intron 30.0%
ATAGAGGATACATAACAAGT+TGG - chr3_1:69856564-69856583 Msa0371620:intron 30.0%
TTATGCAACACTTGGAAAAT+AGG - chr3_1:69856734-69856753 Msa0371620:CDS 30.0%
! CATGTTGACTATTCTGAATT+TGG - chr3_1:69857048-69857067 Msa0371620:CDS 30.0%
! TAATTTTCAACTGTATGGAC+AGG - chr3_1:69857119-69857138 Msa0371620:CDS 30.0%
GATTGCTCATTTGATTGATT+TGG - chr3_1:69857217-69857236 Msa0371620:CDS 30.0%
!! TTTTGGCTATGACTATTAGG+AGG + chr3_1:69853594-69853613 None:intergenic 35.0%
TGTGAAAACCATTACAACGT+AGG + chr3_1:69853686-69853705 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG + chr3_1:69853712-69853731 None:intergenic 35.0%
GAGACTTTATCAAACGTTTG+TGG + chr3_1:69853734-69853753 None:intergenic 35.0%
GTTGCATCTTTATCTGATTC+TGG + chr3_1:69853819-69853838 None:intergenic 35.0%
CTAGTTGAATCACACAACAT+TGG + chr3_1:69853852-69853871 None:intergenic 35.0%
CAATGTTGTGTGATTCAACT+AGG - chr3_1:69853850-69853869 Msa0371620:three_prime_UTR 35.0%
TTAATCACGAGCTCTTTGAA+AGG + chr3_1:69853891-69853910 None:intergenic 35.0%
TGTTGGATATTTGCAATTCG+AGG - chr3_1:69854043-69854062 Msa0371620:CDS 35.0%
AGAGGAATTCTTCCATTCAA+AGG - chr3_1:69854077-69854096 Msa0371620:CDS 35.0%
TGGCTCACTACTAACTAATA+GGG + chr3_1:69854570-69854589 None:intergenic 35.0%
TTGGCTCACTACTAACTAAT+AGG + chr3_1:69854571-69854590 None:intergenic 35.0%
GTTAGTAGTGAGCCAATAAA+TGG - chr3_1:69854575-69854594 Msa0371620:CDS 35.0%
CCAGTTTCTATCCCATTTAT+TGG + chr3_1:69854590-69854609 None:intergenic 35.0%
CCAATAAATGGGATAGAAAC+TGG - chr3_1:69854587-69854606 Msa0371620:CDS 35.0%
! ACTACATTTTTGTTGGTCCT+TGG + chr3_1:69854798-69854817 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG - chr3_1:69854797-69854816 Msa0371620:intron 35.0%
AGGACCAACAAAAATGTAGT+GGG - chr3_1:69854798-69854817 Msa0371620:intron 35.0%
TATCAGAGAGAGAGAAAGAT+TGG - chr3_1:69854836-69854855 Msa0371620:intron 35.0%
ATGGCCATGATTTAATGGTA+CGG + chr3_1:69854906-69854925 None:intergenic 35.0%
!! TAATGGTATGGTGCCATTAA+TGG - chr3_1:69854981-69855000 Msa0371620:intron 35.0%
TAACGTTATGATTCATCCGA+TGG + chr3_1:69855095-69855114 None:intergenic 35.0%
! GATGAAAATTTTGTTGCCGA+TGG - chr3_1:69856014-69856033 Msa0371620:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG + chr3_1:69856042-69856061 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG - chr3_1:69856039-69856058 Msa0371620:intron 35.0%
ACAAGTTTAGATTGGATCTC+TGG - chr3_1:69856047-69856066 Msa0371620:intron 35.0%
! GATGATCTCACACAATTTTG+TGG + chr3_1:69856161-69856180 None:intergenic 35.0%
GGCCAATGCTATATATGTTA+GGG + chr3_1:69856250-69856269 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG - chr3_1:69856437-69856456 Msa0371620:intron 35.0%
GGCCTCATTATCCATAAAAA+TGG + chr3_1:69856482-69856501 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG - chr3_1:69856493-69856512 Msa0371620:intron 35.0%
ATGAGGCCAGATATAGTAAT+GGG - chr3_1:69856494-69856513 Msa0371620:intron 35.0%
TCTTCACCCATTACTATATC+TGG + chr3_1:69856503-69856522 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG + chr3_1:69856634-69856653 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG - chr3_1:69856656-69856675 Msa0371620:intron 35.0%
AAGAAAGGCCAACAAATAGT+AGG + chr3_1:69856686-69856705 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG - chr3_1:69856708-69856727 Msa0371620:intron 35.0%
GTAGGTATTTATGCAACACT+TGG - chr3_1:69856726-69856745 Msa0371620:intron 35.0%
CAACACTTGGAAAATAGGAT+TGG - chr3_1:69856739-69856758 Msa0371620:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG - chr3_1:69856787-69856806 Msa0371620:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG - chr3_1:69856796-69856815 Msa0371620:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG - chr3_1:69856809-69856828 Msa0371620:CDS 35.0%
! GTCAACATGACATTGATTGA+TGG + chr3_1:69857037-69857056 None:intergenic 35.0%
GTATGGACAGGAAAATATTG+TGG - chr3_1:69857131-69857150 Msa0371620:CDS 35.0%
TATTGTGGTTCTTGTTGACA+AGG - chr3_1:69857146-69857165 Msa0371620:CDS 35.0%
CAATCAAATGAGCAATCCAA+AGG + chr3_1:69857214-69857233 None:intergenic 35.0%
!! GGCTTTTGGCTATGACTATT+AGG + chr3_1:69853597-69853616 None:intergenic 40.0%
TTAGTACCATTTCCAGCACA+AGG - chr3_1:69853627-69853646 Msa0371620:three_prime_UTR 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG + chr3_1:69853662-69853681 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG + chr3_1:69853663-69853682 None:intergenic 40.0%
ACCATTACAACGTAGGAGTT+TGG + chr3_1:69853679-69853698 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG - chr3_1:69853752-69853771 Msa0371620:three_prime_UTR 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG - chr3_1:69853753-69853772 Msa0371620:three_prime_UTR 40.0%
! CAATTTGAGACCATACCTGA+TGG - chr3_1:69853789-69853808 Msa0371620:three_prime_UTR 40.0%
TTCTGGTAAACCATCAGGTA+TGG + chr3_1:69853802-69853821 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG + chr3_1:69853807-69853826 None:intergenic 40.0%
GATGGCAATTATGACTTTGC+TGG - chr3_1:69853957-69853976 Msa0371620:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG - chr3_1:69853965-69853984 Msa0371620:CDS 40.0%
GCATTCGAGAGATACAACTT+TGG - chr3_1:69854000-69854019 Msa0371620:CDS 40.0%
TTTGGACTGCTTCTACTTGT+GGG - chr3_1:69854018-69854037 Msa0371620:CDS 40.0%
ACTACTAACTAATAGGGGTG+TGG + chr3_1:69854564-69854583 None:intergenic 40.0%
GGCTCACTACTAACTAATAG+GGG + chr3_1:69854569-69854588 None:intergenic 40.0%
TTCATGGTCATTGAGTCACA+TGG - chr3_1:69854685-69854704 Msa0371620:CDS 40.0%
!! ATTTTGACGGATGCCAATCA+TGG - chr3_1:69854749-69854768 Msa0371620:CDS 40.0%
ACACACACTTGGATAATGTG+TGG - chr3_1:69854950-69854969 Msa0371620:intron 40.0%
CGATAGTAGGGGAAATACTT+TGG + chr3_1:69855009-69855028 None:intergenic 40.0%
TTAGTCAAGGCACGATAGTA+GGG + chr3_1:69855021-69855040 None:intergenic 40.0%
ATGTTCGCAAACTTCTCCAT+CGG - chr3_1:69855076-69855095 Msa0371620:intron 40.0%
TGACAGTTATAAAGGAACGG+AGG - chr3_1:69855374-69855393 Msa0371620:intron 40.0%
GACAGTTATAAAGGAACGGA+GGG - chr3_1:69855375-69855394 Msa0371620:intron 40.0%
TGAAAATGACATTAGCACCG+AGG - chr3_1:69855415-69855434 Msa0371620:intron 40.0%
ATGCGATATGTGCACTGTTT+AGG - chr3_1:69855454-69855473 Msa0371620:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG + chr3_1:69855710-69855729 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG + chr3_1:69855714-69855733 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG + chr3_1:69855723-69855742 None:intergenic 40.0%
TCTACAATCGATCATGTGTG+TGG + chr3_1:69855917-69855936 None:intergenic 40.0%
!!! GTTAGGGTTTTTAGCCCTAA+GGG + chr3_1:69856234-69856253 None:intergenic 40.0%
!!! TGTTAGGGTTTTTAGCCCTA+AGG + chr3_1:69856235-69856254 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG + chr3_1:69856251-69856270 None:intergenic 40.0%
GCAAAACCGTATTCTTTCTC+AGG + chr3_1:69856299-69856318 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG - chr3_1:69856318-69856337 Msa0371620:intron 40.0%
CTAGATGAAGTCAAGGATAG+AGG - chr3_1:69856548-69856567 Msa0371620:intron 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG + chr3_1:69856701-69856720 None:intergenic 40.0%
! CTTGTGATGGAAATGATGGA+AGG - chr3_1:69856800-69856819 Msa0371620:CDS 40.0%
TGAGACAAAACTGCTTAGAG+TGG - chr3_1:69856840-69856859 Msa0371620:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG - chr3_1:69856871-69856890 Msa0371620:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG - chr3_1:69856872-69856891 Msa0371620:CDS 40.0%
CTATGACTATTAGGAGGTGG+AGG + chr3_1:69853588-69853607 None:intergenic 45.0%
TGGCTATGACTATTAGGAGG+TGG + chr3_1:69853591-69853610 None:intergenic 45.0%
ACATGACCTTGTGCTGGAAA+TGG + chr3_1:69853636-69853655 None:intergenic 45.0%
GCCAAACTCCTACGTTGTAA+TGG - chr3_1:69853675-69853694 Msa0371620:three_prime_UTR 45.0%
TGGAAGAGTGGCTAAGGATT+TGG - chr3_1:69853977-69853996 Msa0371620:CDS 45.0%
GGAAGAGTGGCTAAGGATTT+GGG - chr3_1:69853978-69853997 Msa0371620:CDS 45.0%
CTTTGGACTGCTTCTACTTG+TGG - chr3_1:69854017-69854036 Msa0371620:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+TGG - chr3_1:69854026-69854045 Msa0371620:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG - chr3_1:69854059-69854078 Msa0371620:CDS 45.0%
GCAAGTGACAACTGTGTCTA+GGG + chr3_1:69854776-69854795 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG + chr3_1:69854805-69854824 None:intergenic 45.0%
!! CAGCACTTGGGTGTCATTAA+TGG - chr3_1:69854878-69854897 Msa0371620:intron 45.0%
GGCACCGTACCATTAAATCA+TGG - chr3_1:69854899-69854918 Msa0371620:intron 45.0%
!! GTGTGTGTGGGTGTCATTAA+TGG + chr3_1:69854925-69854944 None:intergenic 45.0%
TGTGTGTGTGATGTGTGTGT+GGG + chr3_1:69854937-69854956 None:intergenic 45.0%
ACACACATCACACACACACT+TGG - chr3_1:69854939-69854958 Msa0371620:intron 45.0%
AATGTGTGGCCCAGATCTAA+TGG - chr3_1:69854964-69854983 Msa0371620:intron 45.0%
GGCACCATACCATTAGATCT+GGG + chr3_1:69854976-69854995 None:intergenic 45.0%
TGGCACCATACCATTAGATC+TGG + chr3_1:69854977-69854996 None:intergenic 45.0%
TAGTCAAGGCACGATAGTAG+GGG + chr3_1:69855020-69855039 None:intergenic 45.0%
GTTAGTCAAGGCACGATAGT+AGG + chr3_1:69855022-69855041 None:intergenic 45.0%
ATTTGCATACACTGTCAGCG+TGG - chr3_1:69855813-69855832 Msa0371620:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG + chr3_1:69856033-69856052 None:intergenic 45.0%
TGACTCTGATGAAGCTTGGA+AGG + chr3_1:69856097-69856116 None:intergenic 45.0%
TCAGTGACTCTGATGAAGCT+TGG + chr3_1:69856101-69856120 None:intergenic 45.0%
TGAATCCCTTGACACCCTTA+GGG - chr3_1:69856217-69856236 Msa0371620:intron 45.0%
!! TTTAGCCCTAAGGGTGTCAA+GGG + chr3_1:69856225-69856244 None:intergenic 45.0%
!!! TTTTAGCCCTAAGGGTGTCA+AGG + chr3_1:69856226-69856245 None:intergenic 45.0%
! GAATACGGTTTTGCAGCAAG+TGG - chr3_1:69856305-69856324 Msa0371620:intron 45.0%
TTGCTCATCCATCAGTTGGA+GGG - chr3_1:69856606-69856625 Msa0371620:intron 45.0%
GGTTCCTAACTCATTGTGGT+TGG - chr3_1:69856627-69856646 Msa0371620:intron 45.0%
CAGGTCTGCCTACTATTTGT+TGG - chr3_1:69856675-69856694 Msa0371620:intron 45.0%
ACAGATGCTACTAATGTGGG+AGG - chr3_1:69856875-69856894 Msa0371620:CDS 45.0%
!! AATATGATATTAAATAATTA+AGG + chr3_1:69855237-69855256 None:intergenic 5.0%
CTTTGCTGGAAGAGTGGCTA+AGG - chr3_1:69853971-69853990 Msa0371620:CDS 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG + chr3_1:69854765-69854784 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG + chr3_1:69854777-69854796 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG - chr3_1:69854778-69854797 Msa0371620:CDS 50.0%
GATTGGATCCACGCTACTAG+CGG - chr3_1:69854853-69854872 Msa0371620:intron 50.0%
GTGTGTGTGTGATGTGTGTG+TGG + chr3_1:69854938-69854957 None:intergenic 50.0%
GTGGCCCAGATCTAATGGTA+TGG - chr3_1:69854969-69854988 Msa0371620:intron 50.0%
! TTTTGTTGCCGATGGCACCT+TGG - chr3_1:69856022-69856041 Msa0371620:intron 50.0%
GTGAATCCCTTGACACCCTT+AGG - chr3_1:69856216-69856235 Msa0371620:intron 50.0%
ATTGGCCCACTTCACATGCT+TGG - chr3_1:69856263-69856282 Msa0371620:intron 50.0%
GCCTACCAAGCATGTGAAGT+GGG + chr3_1:69856271-69856290 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG + chr3_1:69856272-69856291 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG + chr3_1:69856601-69856620 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG - chr3_1:69856602-69856621 Msa0371620:intron 50.0%
CTTGCTCATCCATCAGTTGG+AGG - chr3_1:69856605-69856624 Msa0371620:intron 50.0%
GTTAGGAACCCTCCAACTGA+TGG + chr3_1:69856617-69856636 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG - chr3_1:69856623-69856642 Msa0371620:intron 50.0%
GGGTTCACATGACCTTGTGC+TGG + chr3_1:69853642-69853661 None:intergenic 55.0%
CTACTAGCGGAGCAGCACTT+GGG - chr3_1:69854866-69854885 Msa0371620:intron 55.0%
GCCCACTTCACATGCTTGGT+AGG - chr3_1:69856267-69856286 Msa0371620:intron 55.0%
GCTACTAGCGGAGCAGCACT+TGG - chr3_1:69854865-69854884 Msa0371620:intron 60.0%
! GTGCTGCTCCGCTAGTAGCG+TGG + chr3_1:69854864-69854883 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 69853549 69857280 69853549 ID=Msa0371620;Name=Msa0371620
chr3_1 mRNA 69853549 69857280 69853549 ID=Msa0371620-mRNA-1;Parent=Msa0371620;Name=Msa0371620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.5|1|1|1|2|322|497
chr3_1 exon 69853549 69854814 69853549 ID=Msa0371620-mRNA-1:exon:14983;Parent=Msa0371620-mRNA-1
chr3_1 exon 69856731 69857280 69856731 ID=Msa0371620-mRNA-1:exon:14982;Parent=Msa0371620-mRNA-1
chr3_1 CDS 69856731 69857280 69856731 ID=Msa0371620-mRNA-1:cds;Parent=Msa0371620-mRNA-1
chr3_1 CDS 69853871 69854814 69853871 ID=Msa0371620-mRNA-1:cds;Parent=Msa0371620-mRNA-1
chr3_1 three_prime_UTR 69853549 69853870 69853549 ID=Msa0371620-mRNA-1:three_prime_utr;Parent=Msa0371620-mRNA-1
Gene Sequence

>Msa0371620

ATGTCTCAAGAAAAGCAAAATAAAATAGAGTATACTCCTCCACCTCCTAATAGTCATAGCCAAAAGCCTCATATTGTATTAGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGTAATGGTTTTCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGATAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCTGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAAGATATTCCAATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAGGATTTGGGCATTCGAGAGATACAACTTTGGACTGCTTCTACTTGTGGGTTTGTTGGATATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATCAGAGTCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTGAGCCACAAAATTGTGTGAGATCATCGGCAATCATCATTAACACATTTGAAGAATTAGAAGGTGAATCCCTTGACACCCTTAGGGCTAAAAACCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCCTGAGAAAGAATACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAGTTACCATTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAAGTCAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATAGGATTGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTAGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA
Protein sequence

>Msa0371620

MSQEKQNKIEYTPPPPNSHSQKPHIVLVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLIKSLGADFVKGLPDFQFETIPDGLPESDKDATQDIPMLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRVTDLNDIMFDFFCVEPQNCVRSSAIIINTFEELEGESLDTLRAKNPNIYSIGPLHMLGRHFPEKEYGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTDHHLKEFAWGIANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWKIGLEINYDVKREEITELVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*